	FusionGeneSummary
	FusionProtFeature
	FusionGeneSequence
	FusionGenePPI
	RelatedDrugs
	RelatedDiseases

Fusion gene ID: 28415

FusionGeneSummary for PPP2R2A_APP

Fusion gene summary

Fusion gene information	Fusion gene name: PPP2R2A_APP
	Fusion gene ID: 28415
		Hgene	Tgene
	Gene symbol	PPP2R2A	APP
	Gene ID	5520	351
	Gene name	protein phosphatase 2 regulatory subunit Balpha	amyloid beta precursor protein
	Synonyms	B55A\|B55ALPHA\|PR52A\|PR55A\|PR55alpha	AAA\|ABETA\|ABPP\|AD1\|APPI\|CTFgamma\|CVAP\|PN-II\|PN2\|preA4
	Cytomap	8p21.2	21q21.3
	Type of gene	protein-coding	protein-coding
	Description	serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoformprotein phosphatase 2, regulatory subunit B, alpha	amyloid-beta A4 proteinalzheimer disease amyloid proteinamyloid beta (A4) precursor proteinamyloid beta A4 proteinamyloid precursor proteinbeta-amyloid peptidebeta-amyloid peptide(1-40)beta-amyloid peptide(1-42)beta-amyloid precursor proteincereb
	Modification date	20180523	20180527
	UniProtAcc	P63151	P05067
	Ensembl transtripts involved in fusion gene	ENST00000380737, ENST00000315985, ENST00000523473,	ENST00000346798, ENST00000354192, ENST00000348990, ENST00000357903, ENST00000358918, ENST00000359726, ENST00000448388, ENST00000440126, ENST00000439274, ENST00000474136,
Fusion gene scores	* DoF score	15 X 9 X 8=1080	16 X 17 X 6=1632
	# samples	21	20
	** MAII score	log2(21/1080*10)=-2.36257007938471 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0	log2(20/1632*10)=-3.02856915219677 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0
Context	PubMed: PPP2R2A [Title/Abstract] AND APP [Title/Abstract] AND fusion [Title/Abstract]
Functional or gene categories assigned by FusionGDB annotation

* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Partner	Gene	GO ID	GO term	PubMed ID
Hgene	PPP2R2A	GO:0006470	protein dephosphorylation	1849734
Tgene	APP	GO:0001934	positive regulation of protein phosphorylation	11404397
Tgene	APP	GO:0008285	negative regulation of cell proliferation	22944668

Fusion gene information from three resources
(ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018))
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.

Data type	Source	Cancer type	Sample	Hgene	Hchr	Hbp	Hstrand	Tgene	Tchr	Tbp	Tstrand
TCGA	LD	BRCA	TCGA-AC-A2BK-01A	PPP2R2A	chr8	26151256	+	APP	chr21	27484463	-

* LD: Li Ding group's fusion gene list
RV: Roel Verhaak group's fusion gene list
ChiTaRs fusion database

Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.

ORF	Henst	Tenst	Hgene	Hchr	Hbp	Hstrand	Tgene	Tchr	Tbp	Tstrand
Frame-shift	ENST00000380737	ENST00000346798	PPP2R2A	chr8	26151256	+	APP	chr21	27484463	-
5CDS-intron	ENST00000380737	ENST00000354192	PPP2R2A	chr8	26151256	+	APP	chr21	27484463	-
5CDS-intron	ENST00000380737	ENST00000348990	PPP2R2A	chr8	26151256	+	APP	chr21	27484463	-
5CDS-intron	ENST00000380737	ENST00000357903	PPP2R2A	chr8	26151256	+	APP	chr21	27484463	-
5CDS-intron	ENST00000380737	ENST00000358918	PPP2R2A	chr8	26151256	+	APP	chr21	27484463	-
5CDS-intron	ENST00000380737	ENST00000359726	PPP2R2A	chr8	26151256	+	APP	chr21	27484463	-
5CDS-5UTR	ENST00000380737	ENST00000448388	PPP2R2A	chr8	26151256	+	APP	chr21	27484463	-
5CDS-5UTR	ENST00000380737	ENST00000440126	PPP2R2A	chr8	26151256	+	APP	chr21	27484463	-
5CDS-intron	ENST00000380737	ENST00000439274	PPP2R2A	chr8	26151256	+	APP	chr21	27484463	-
5CDS-5UTR	ENST00000380737	ENST00000474136	PPP2R2A	chr8	26151256	+	APP	chr21	27484463	-
Frame-shift	ENST00000315985	ENST00000346798	PPP2R2A	chr8	26151256	+	APP	chr21	27484463	-
5CDS-intron	ENST00000315985	ENST00000354192	PPP2R2A	chr8	26151256	+	APP	chr21	27484463	-
5CDS-intron	ENST00000315985	ENST00000348990	PPP2R2A	chr8	26151256	+	APP	chr21	27484463	-
5CDS-intron	ENST00000315985	ENST00000357903	PPP2R2A	chr8	26151256	+	APP	chr21	27484463	-
5CDS-intron	ENST00000315985	ENST00000358918	PPP2R2A	chr8	26151256	+	APP	chr21	27484463	-
5CDS-intron	ENST00000315985	ENST00000359726	PPP2R2A	chr8	26151256	+	APP	chr21	27484463	-
5CDS-5UTR	ENST00000315985	ENST00000448388	PPP2R2A	chr8	26151256	+	APP	chr21	27484463	-
5CDS-5UTR	ENST00000315985	ENST00000440126	PPP2R2A	chr8	26151256	+	APP	chr21	27484463	-
5CDS-intron	ENST00000315985	ENST00000439274	PPP2R2A	chr8	26151256	+	APP	chr21	27484463	-
5CDS-5UTR	ENST00000315985	ENST00000474136	PPP2R2A	chr8	26151256	+	APP	chr21	27484463	-
3UTR-3CDS	ENST00000523473	ENST00000346798	PPP2R2A	chr8	26151256	+	APP	chr21	27484463	-
3UTR-intron	ENST00000523473	ENST00000354192	PPP2R2A	chr8	26151256	+	APP	chr21	27484463	-
3UTR-intron	ENST00000523473	ENST00000348990	PPP2R2A	chr8	26151256	+	APP	chr21	27484463	-
3UTR-intron	ENST00000523473	ENST00000357903	PPP2R2A	chr8	26151256	+	APP	chr21	27484463	-
3UTR-intron	ENST00000523473	ENST00000358918	PPP2R2A	chr8	26151256	+	APP	chr21	27484463	-
3UTR-intron	ENST00000523473	ENST00000359726	PPP2R2A	chr8	26151256	+	APP	chr21	27484463	-
3UTR-5UTR	ENST00000523473	ENST00000448388	PPP2R2A	chr8	26151256	+	APP	chr21	27484463	-
3UTR-5UTR	ENST00000523473	ENST00000440126	PPP2R2A	chr8	26151256	+	APP	chr21	27484463	-
3UTR-intron	ENST00000523473	ENST00000439274	PPP2R2A	chr8	26151256	+	APP	chr21	27484463	-
3UTR-5UTR	ENST00000523473	ENST00000474136	PPP2R2A	chr8	26151256	+	APP	chr21	27484463	-

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FusionProtFeatures for PPP2R2A_APP

Main function of each fusion partner protein. (from UniProt)

Hgene	Tgene
PPP2R2A P63151	APP P05067
The B regulatory subunit might modulate substrateselectivity and catalytic activity, and also might direct thelocalization of the catalytic enzyme to a particular subcellularcompartment.

Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at
download page
.

* Minus value of BPloci means that the break pointn is located before the CDS.

- In-frame and retained protein feature among the 13 regional features.

Partner

Gene

Hbp

Tbp

ENST

Strand

BPexon

TotalExon

Protein feature loci

*BPloci

TotalLen

Protein feature

Protein feature note

- In-frame and not-retained protein feature among the 13 regional features.

Partner

Gene

Hbp

Tbp

ENST

Strand

BPexon

TotalExon

Protein feature loci

*BPloci

TotalLen

Protein feature

Protein feature note

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FusionGeneSequence for PPP2R2A_APP

For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences.
(nt: nucleotides, aa: amino acids)

* Fusion amino acid sequences.

* Fusion transcript sequences (only coding sequence (CDS) region).

* Fusion transcript sequences (Full-length transcript).

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FusionGenePPI for PPP2R2A_APP

Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in
ChiPPI page
.

Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)

Hgene	Hgene's interactors	Tgene	Tgene's interactors
PPP2R2A	FAM107A, TCEAL1, PPP2CA, PPP2R1B, EIF4EBP1, MTOR, RPS6KB1, RRN3, PPP2R1A, PPP2CB, TGFBR1, MLH1, PPP2R2D, CDCA4, SKIV2L2, CCT5, CCT8, CCT2, CCT4, CCT7, TUBA4A, CCT3, TCP1, FABP5, DSP, DSG1, CCT6A, GAPDH, HDAC5, NDRG1, ELAVL1, CUL3, PTPN14, GRK5, NOTCH1, SMURF1, GRB2, CFTR, EGFR, CDK17, CDK16, LATS2, HSPA4L, NRD1, CACNA1S, PPP3CA, THUMPD1, ABCE1, FAM122A, SERTAD4, IER2, RPS6KB2, NCAPD3, PPP2R5C, PPP2R5D, WDR4, NTRK1, AHI1, XPO1, PPME1, FOXC1, FOXC2, GC, RPS28, YARS, RBM7, RAB11FIP5, ECSIT, FBXL16, CRY2, MCM2, NOSIP, C1orf131, PTAR1, WWP2, DERL1, DUSP19, PHLPP1, PPP4C, PTPDC1, FOXD4, FAM19A3, AR, UBE2A	APP	APPBP2, CLSTN1, APBB2, APBA2, FBLN1, APBA1, APBA3, DAB2, CALR, COL25A1, HSD17B10, CAV1, KLC1, NCSTN, BGN, APBB1, SNCA, SNCB, DAB1, ACHE, SHC1, NAE1, GSN, BLMH, APBB3, HGS, BCAP31, SET, PARK2, STUB1, HSPD1, HSPA4, HSP90AA1, SYVN1, NOTCH1, FBXL2, YWHAG, KAT5, GSK3B, UBQLN1, NAPG, UBB, MAPK8IP1, MAPRE1, GGA1, CLU, LRP2, CRYAB, HSPA8, UBE2M, TPPP, NOS3, DMTN, TCEANC, WIBG, MRPL19, C17orf85, PRR16, HOMER2, VIM, NSRP1, RPL30, RTF1, E2F8, SMTNL2, SLAIN2, GABARAPL2, PLK1, IGBP1, MAP2, KCNAB1, EIF4E2, TPRXL, MPG, DDX19B, ENY2, WDR5, AKNAD1, ZNF706, ADAP2, KIF3B, PDAP1, RAD51AP1, TCP10L, TPT1, GIMAP4, C1orf131, STAC, FAM114A2, UBXN10, RASL11B, CDK16, TSLP, RPAP3, YY1, BOD1, TOX2, TMA16, NTMT1, ATP6V1G1, AURKA, ELK1, PNMAL1, CTNNA1, MCM10, TCEAL2, FGF12, PRR15, MZT2A, TRPT1, DCX, HMCES, MRPL1, SLIT1-AS1, RGS3, PSRC1, C7orf50, TOP1, KIFC3, RPS19, C11orf63, ERMN, IRS1, SERBP1, TRUB1, TBC1D10C, C1orf87, POGZ, TMA7, C19orf57, COASY, G3BP1, FEN1, RPL12, ARID3A, LMCD1, CWF19L2, ZFYVE27, NOLC1, ZMYM5, ARGLU1, DDX54, GCC1, C9orf41, LIMCH1, CENPB, PTBP1, PPID, NKIRAS1, WHSC1, TOM1L2, CSAG1, ASPSCR1, CLIP4, PPP1R32, POLD3, MOB3A, RGS10, SCEL, SH3GLB1, PLIN3, RPS10, BRWD1, FANCM, CAT, UBXN6, TAF1B, PP2D1, NOP16, SNRNP70, DDX47, EIF1AX, SOCS3, TRIM41, LSM6, DIRAS1, RGS14, ARL4C, ZAP70, ARFGAP1, RSRC2, STXBP1, DDX55, HINT2, C9orf43, PHF7, C12orf65, TCEA1, SOX5, SEPT9, PATL1, RITA1, KLC4, ACO2, FLOT2, CIRH1A, IER3, ODF2, EIF1, HK1, SECISBP2, CDK17, ANKZF1, PTTG2, APRT, ATAT1, PYCR2, FAM126B, C1orf35, TPH1, VPS33B, STK25, MLLT6, NUAK1, C1orf110, HMGB2, PTPN7, DDX18, IFRD2, HERPUD1, CASZ1, LRRC59, FMNL1, QKI, TTLL7, CCNB1IP1, BLOC1S1, TAF9B, OAS2, LATS1, NMT2, APEX2, EPB41L2, CWC15, SSB, TACO1, AICDA, NAT6, RPS20, SENP2, TCF19, KIF2C, ECI2, TARBP2, C6orf201, MAPK13, PRDX5, RP9, FDX1L, RNPC3, LIG3, MOB3C, NPM1, MRPL34, TCP10, KLC2, SPATA2, PRRC2B, LCP2, SURF2, ZW10, TSSC4, MYL5, BUD31, TRIM52, CCDC149, FAM53A, CELF2, CEP57, TRMT2A, GAK, STOML2, PPFIBP2, AVPI1, GAPDH, TAB2, SERPIND1, ING2, DEF6, EIF5, NOB1, KCTD18, BCL7C, CTF1, ZC3HAV1L, FAM64A, C9orf78, ALDOB, ZC2HC1A, TIGD1, HP1BP3, THAP3, EIF3G, ARFIP2, KIAA0930, CXorf56, SCYL1, ASXL1, SASH3, ANXA9, POP7, GRB10, SH3RF2, CRIP2, TASP1, IKBIP, LRRC8D, PSMC1, ARL4D, GOLGA4, FAM32A, RASL10B, RASL12, TOB1, MXI1, EIF2S2, KRAS, EME1, DNM2, C1orf115, COPS7B, ZGRF1, APLF, MRPS24, CDKL3, EPB41L5, GADD45GIP1, TRIM63, RPL31, LACRT, RASA1, UNG, SPZ1, OR2W1, RPUSD2, BBX, NUAK2, ACSL4, RPF2, DLGAP1-AS2, C11orf52, USE1, CDKN1A, HIST1H2BM, EPB41L4A, ZADH2, GYG2, PAK4, ARHGAP24, DCLK1, PCBD2, C19orf40, PDZD4, DHX58, MAPKAPK3, DFFB, DYRK2, RPS9, NFKBIB, LNX1, CD74, ECH1, RPS12, GPANK1, CPLX2, BCAR3, GALK1, PADI4, PAK6, RPS16, BIN1, COIL, TLE3, PDE6H, GPT2, ANKRD50, AIMP1, PPP1R14A, MPP3, GORAB, C2orf49, MKNK1, ETV3, PAPSS2, SMAD3, MTG1, TSPYL1, CLEC3B, ACTR1B, SPANXN3, MCM7, BLOC1S2, GTF2E2, GTPBP1, FANCI, MESDC2, GBA2, MRPL49, PRRC1, MLX, BTF3, DDX43, CSNK1G2, ADRM1, RPL36, HSPBP1, DDX42, PLEKHG2, BIK, AMOT, TCP11, AFAP1L2, ADD2, CUL3, GOSR2, MED8, SH3GL2, SMAP1, DDRGK1, PAK2, RPL41, MRPL10, ZNF622, NR1D1, DDX17, DNAJC8, SP2, ZFYVE1, ZNF365, ABLIM1, AURKB, RASGRP3, IQCH, ASXL2, FNDC3A, KCNAB3, C19orf43, C1orf174, RGS5, OSBPL11, LYRM7, MSL3, TRAF3IP1, LOC541472, BLOC1S5, PNKD, SEPT5, CRADD, EEPD1, CLK3, BAIAP2, LARP4, SART1, MRPS18A, SOCS5, RGL1, AGPAT3, ZHX2, STK40, ARHGEF40, MRPL28, KIF3A, TAF6, DYNLRB2, LAP3, ABCF1, CCNB3, ARMC1, FUBP3, ISL1, GLRX5, PTP4A1, BYSL, PCIF1, RPL23, UTP23, UCHL5, TRAPPC2L, ORC6, RNF32, ROPN1L, RAP1B, ITGB3BP, SHOC2, ZNF684, LIMA1, PRKCI, NFYA, TTPA, SMIM11, NBPF3, LARP1B, POGK, RBM42, DEDD, IMP4, MAGEH1, BCKDK, HADH, TPD52L3, PLEKHO2, TGFBR2, ADH5, CDK3, ZNF22, TBCC, SERP1, MED24, SF3B6, HS3ST1, CCDC106, AIFM3, FIP1L1, ATF2, DPY19L2P1, NEDD9, PHYH, LUC7L2, CSNK1D, RAB40B, MRPL35, CCSER2, TFPT, CCDC59, MRPL11, ZNF2, IFIH1, TRIM40, SETBP1, DMD, ZNF410, ATP5H, ERG, RSRP1, HBG1, GJB1, ATG16L1, UBE2E2, HIST2H2AA3, POLE3, DENND6B, PPP1R8, FAM133B, TK1, GYS1, SIVA1, LMNTD1, BMX, HNRNPA1, UBE2S, COL14A1, COX6A2, HOMER3, HBS1L, ZNF574, MND1, GABPA, SDC1, KLF12, ALDH4A1, LARP6, DDHD2, ULK4, MOB1A, BMPR1B, ATF6, PHF20L1, TIPIN, ENTHD2, GNL2, CHGB, TBPL1, PRSS23, EIF2B5, ECHDC2, ARPC1B, WASH2P, DUS3L, SLC4A1AP, SPX, ZSCAN1, CCDC60, ACBD6, KCNN3, NUSAP1, PDE4D, NECAP1, PIP4K2C, DCDC2, NOL7, ADAT2, TWF1, BCAT2, SIRT7, OLFML2A, TBC1D7, RNF41, MAP1LC3A, ANKS6, SMAD1, CAPNS2, PHGDH, ECHDC1, HDAC4, VPS37C, PPAN, PSMA1, PCK1, ENKD1, ARNT2, CACNB1, PSMD11, MAPK7, ZMAT4, CSNK1E, HSPB7, GPKOW, ELK3, DCTN6, POLR2K, XAF1, CDC20, OCEL1, MX1, MORF4L1, GFAP, MYBBP1A, IL15, CTNND1, VCY1B, PTPN12, CCDC115, SRRT, RNMTL1, RUSC1, TSPY2, ACAD10, FGF16, CCDC15, SYCP2L, ACLY, ENO3, ATP5C1, FKBP1A, OTX2, SAMHD1, PNKP, HEYL, RPS6KB1, CCNL1, HDDC3, PLA2G4D, RPS11, MTURN, CHKA, FCHO1, PACRG, TTK, DNAJB1, C3orf36, STK17B, AAMDC, DPY19L2P4, STAU1, RRP15, BRD3, SIRT5, DDX1, CAAP1, RBM8A, CSNK2A1, LARP7, HIST1H2BA, NME3, ZNF740, SYK, TCP11L1, EMG1, PPHLN1, PLEKHJ1, KRTCAP2, AK4, BEND5, CMAS, ZMYM3, PRR14, CARF, PLSCR1, RPL34, KIAA1191, ITGB1BP1, TSSK2, FGFR2, LOC254896, MMGT1, SYT6, LINC00982, ATP5A1, SPG20, FSD1L, DRAP1, ZRSR2, HRASLS5, SRSF3, SKA3, GAS2, KCNK5, NELFA, USP2, YWHAB, HMBS, C14orf93, RCAN1, LETM2, BLOC1S6, LMX1B, TSSK6, CMTM2, CAMKK2, DIDO1, NAA25, SGK2, SRSF8, HIC2, SPATA4, ZFC3H1, PHYHD1, SYNCRIP, ABR, NECAB3, CDCA7, PSMA5, SND1, ASS1, THAP4, CAMK1D, PHACTR4, FBXO38, ARAP1, LOC401068, SIK2, SETD3, ZNF343, MARCH10, HBZ, CDK5R1, RGS1, SRR, LAD1, MURC, ADARB1, MYOZ1, KANSL2, SUPT4H1, ZSCAN5A, CHRAC1, PAIP2, PAGR1, UPF3A, EXOC3, HMGCS2, SNX1, LOC554207, TBC1D9B, PDPK1, ZCCHC17, FKBPL, TOM1, CLDN16, ABHD11, URI1, SP140L, RLBP1, TARP, WARS, EXOSC3, DKFZP434K028, MAT2B, SAE1, DYRK1A, ELF2, PRKCD, MB, TBCD, FAM90A1, HELLS, NUMB, DNAJC4, STIP1, CENPI, CSNK1G1, TICRR, CINP, ZNF35, TPI1, GNAZ, STK33, E2F6, TMOD2, NOL12, ICK, TTC23, PAK1, DECR1, HAGH, RPL37A, SULF1, GPAM, DDX10, YWHAZ, CCZ1B, DPCR1, ANKS4B, MAK, DZIP1L, ABCB7, UBAC1, NIM1K, TFPI, SLC7A1, AGFG1, VAC14, NNMT, PPP3CC, NR1H3, ZSCAN16, NEIL1, CFDP1, RAB39A, DECR2, CPEB1, PRSS33, FILIP1, PRPSAP2, ACO1, OARD1, WASL, PPIL2, KIFC1, CCDC88C, SLFNL1, SSTR2, FAM184A, C18orf21, SF3B2, CFAP58, H1F0, PHF8, DUSP12, UBL4A, GIMAP5, POMZP3, BEGAIN, AKT1, SOX7, BEND2, SPSB2, GPN2, FIBP, TNIP2, SPATS2, KLHL32, ZCCHC8, C2orf57, ING3, WWC3, METTL2B, RPL37, IFI16, LETMD1, NUDT16L1, SSBP3, EFS, TSKS, ATPAF2, TRAIP, MAPRE2, MAPK11, EIF2B2, C22orf46, ANKRD36BP1, ETNPPL, DUSP4, SAR1A, LIN7A, PSMD4, VPS41, BCL2L13, MRPL24, FAM212B, ARL6IP6, TMEM53, SLCO2B1, DLGAP5, CENPQ, RPS26, MEF2D, USP39, KLF8, DYNC1LI2, ERH, INIP, MLLT3, CHEK1, CCL26, PCDHGA12, RCOR3, ACSL3, ODF2L, COPZ1, METAP2, MARS2, PLBD1, PCK2, YTHDF2, C4orf46, RBX1, SUSD3, METTL16, LIMD1, MRPL27, POLH, POMC, C19orf33, BCL2L11, BHLHB9, ACY1, PPP2R5C, NEK11, PLEKHF2, IL26, IGSF10, HOXC6, CDC7, PPP1R17, STK26, TARDBP, OLFM1, SRPK2, SIGIRR, KLF6, PWP1, LENG1, RASGRP2, VWA5A, FAAH2, RIOK2, CAPRIN1, RSU1, ZMAT3, GNAT2, TP53TG1, MCC, FAM50A, RASA3, ARHGAP9, BHMT2, RIT2, CHTOP, CCNG1, IFT81, MRPS6, TXNDC5, OR7A5, PRKRIP1, LOC142937, DGCR6, SLX4, LRRC42, FBF1, NDUFB1, PARD6B, FRMD8, CDC25A, RAB14, TAF9, C3orf33, TRIM44, GIMAP8, AHDC1, ECI1, NPL, MRPL53, C11orf71, IK, QARS, FAM19A4, C11orf53, DTWD1, NDUFB6, CDK2AP2, GSTA3, AGO4, ZFAND5, FTSJ1, SMURF1, SNRNP35, MTMR14, ZXDC, SCD, PTK2, CDC42EP4, NXT2, FRG1B, MBD1, DSN1, RUFY3, PUSL1, VAMP3, ORC3, KLF4, C11orf45, FBXL7, ZCCHC12, IL18RAP, NDP, MROH8, AGAP1, CDKN2B, SERPINB2, TEX2, PROSER2, CLP1, FHL2, MOBP, NOVA1, TET3, PKM, ZC3HAV1, PRPF4, RPS6KA6, OR4D6, LOC403312, TCL1B, TOMM5, IRF2, CCT7, ZNF720, MEOX1, HBD, IGSF6, NMNAT1, TBC1D3P2, CDK5, LURAP1L, AIMP2, ZNF839, HIST1H4I, RBM4B, ARHGAP17, DNAJB6, TRAP1, PSME1, MRPL3, ATG12, GPR78, VPS29, S100A16, CHURC1, EIF6, LIPT1, LGALS2, HIGD2A, HOXB7, C15orf43, ASB6, MVB12A, LIMS2, DNALI1, CCDC33, EOGT, HIST2H2AB, EPB41L1, LMAN1, FAM212A, EAF1, OSM, IGHM, MEIS2, MICU1, SENP1, LAMC1, GPATCH1, RPL3L, PCYT1B, ATP6V1E1, ZNF23, CHCHD6, SLC35B1, SRSF1, ESRRG, PRICKLE2, CXCL16, RTKN, TRAM1, DPCD, RAI2, POLI, DENND1C, PTBP3, CLUAP1, HINT3, FAM47B, OXSR1, ARMC9, HMBOX1, PHLDA1, C8orf33, EP400NL, TAF7L, HMG20B, VHL, NARF, MCFD2, CTSB, SCAMP3, STRIP2, MCM5, QPCTL, USP6, TP53TG5, AGR2, SLC41A3, CELF4, OLFM3, CD36, ICT1, C3orf20, PIBF1, COPB1, GSPT2, CENPT, TAGLN2, RAB43, CCNE2, MRPS2, TGIF1, USP12, CD58, USP6NL, TCN2, GABRA4, PDSS2, APOA1, COPS5, IARS2, AHSA1, OPA1, SGK3, LPL, MED19, TNNT2, RPS14, UBE2G1, PSME2, CDIPT, KIAA1143, RNF183, CD300LF, TMEM126B, DGCR8, ALKBH7, AAK1, FOXI1, FMNL2, GALE, PARVG, FERMT3, WARS2, ZWINT, C21orf33, LFNG, TRDMT1, COL4A6, SOD2, CCDC144NL, DERL1, SRPK1, AK1, KCNMB2, TCEANC2, NECAP2, KLF7, DCTPP1, RAB11B, ARMC7, IDO1, POLL, SDCCAG3, MRPL20, MSMB, CCDC40, LY86, VAPA, WDR45B, CRACR2B, RAB10, COMMD2, RNF115, SYF2, ACTL7B, IL7, SULT1A3, GSTA1, ANKRD39, CIART, DDX20, MCM2, GPR61, H2AFV, WDR88, PTGDR, CGB, TIMM17B, CMTM3, DGUOK, TPRA1, ERVFRD-1, LINC00341, PSAT1, ORC4, NDEL1, ORMDL1, BAALC-AS2, PPP5C, TRAPPC3, MTFMT, S100A8, VTA1, USF1, PPP1R3C, GAL3ST1, SMARCB1, BNIP1, TBX22, PLRG1, NME8, MDM4, IPO4, EXOSC1, RALGPS1, DIMT1, GTDC1, COX4I2, RETSAT, RXFP3, MPV17L, NDUFA2, POLR2F, SEPT1, SKAP2, RUVBL2, AFG3L1P, ALDH8A1, ARHGDIB, RAB1B, C21orf59, KIAA0825, NRIP1, MRAP2, HAPLN1, CAMKK1, TGM2, CELF1, TNFSF14, DSCR9, RAB8B, ANXA8, CDK18, PIP5K1A, SRSF9, RIMS4, THAP7, C15orf39, GAGE1, POMGNT2, DEFA6, IREB2, PCDHGC3, CERK, WASH3P, PARP3, SH3BP5, HSPA9, UGCG, CLASRP, CCDC28B, MITF, RAB7B, SNX21, GNLY, PCDHA7, MAP2K3, SERAC1, DNAJB14, WDR45, SHMT2, KRT36, TRMT1L, TPMT, DIEXF, GEMIN8, RAB5C, GTF2E1, NAPA, CDK4, STOML1, FAM131C, ANKRA2, GUCD1, AGER, SUB1, C19orf18, DNAJC12, RPA4, GRAMD4, ALDH2, PGM3, ETFB, COLEC12, PPP6R2, ACKR2, PCDHGC5, MAPK10, RAB38, KIAA1841, PPAP2B, ETHE1, NMNAT2, PIKFYVE, GUCY1B3, OPA3, PLA2G4C, CD300LB, ZDHHC23, PFKL, NXF2, SPINT2, PUS7L, TRIM69, ZNF483, CUL4B, RNF34, EIF4E, SNAI2, ASCL3, C7orf31, HMGB4, NECAB1, REG1A, PIK3R5, ADAD2, CAPSL, MYOT, BIN3-IT1, ASGR1, C1D, APOBEC3G, GSTO1, RPS27A, ARF6, SEC24C, PPP2R4, CRHR2, SPAG6, RAB26, HCFC1R1, RBM39, CCL13, NAT2, NDUFS4, RPS18, ZC3HC1, FMNL3, KIF4A, VIPR2, KLK7, ZKSCAN1, NUDT9, CBFA2T2, PPIA, SYNJ2BP, IFNW1, TRAF6, MIER1, C3orf62, UBE3A, WDR89, MXD1, EBF4, SPIC, KCNE1L, SRSF6, ZCCHC6, L3MBTL4, YAE1D1, ANXA2, PLK2, ANKS1B, ZSCAN18, GGA2, DCUN1D2, SH2D1B, CDPF1, GSDMB, SLC1A1, FERMT2, VPS37A, TSNAXIP1, P2RX6, MRRF, GAPDHS, INTS12, C1orf64, EIF3M, OBFC1, ASPH, KAT7, ETV5, HYPK, EPHA2, LGALS3, SPC24, SLC48A1, VASH2, KPNA2, CLDN3, TMEM97, ARRDC1, ACAA2, ANKRD13D, CDK7, LANCL2, YPEL3, DYNLT1, C12orf5, RWDD2B, PDE1A, C6orf118, ADH4, ALB, GNB5, EIF2A, PSMD5, CFAP53, PGM1, SERF1A, AEBP2, TBC1D20, ARCN1, USP5, RSPH3, CDKL2, CCDC107, RD3, UGGT2, TSPAN5, TMX3, FUCA1, AP2A2, ARPP19, C19orf12, MPI, GRHL2, CCIN, RSPH10B2, SUN5, EEF1B2, C16orf70, PYROXD1, TNFAIP8L1, CLDN20, PIK3R2, POLDIP2, TCEA2, NLRP2, LRRC1, NOL11, RAB35, FGFBP2, CHEK2, NARFL, ISOC2, UBE3C, BRMS1, TANK, BET1L, SRRM2, PLCD4, C17orf70, CSTF2, IFI6, R3HDML, FKBP5, NGLY1, OXSM, MKKS, FOXJ2, MCTP2, MAD2L1, RBPJ, ARL5A, FAM151A, CAMKV, AFG3L2, TEX37, MEST, PARVA, GLOD4, PTMS, MCEE, MED11, BDH1, FAM127B, FAM127A, INPP5B, LLPH, DNAH14, SDF4, GNRH2, CSRP1, NAV1, DEPTOR, CTBP2, NDUFA4, EMC8, ASMTL, HBG2, BCL11A, TSPAN13, CYB561D2, PEX2, MMP12, OSTF1, CHMP3, MTERF4, RRAGB, UBL3, DHRS7B, PDS5B, CDCA3, RBPJL, HAVCR2, TUBB, TAF11, UBXN7, C11orf54, CISD2, HIST1H2BB, STK11, STX11, LINGO2, HIRIP3, CXXC4, MARCH3, NOC2L, SMYD3, AKT2, RAB28, UXT, ACSBG1, RGS18, NNAT, DUSP21, ST3GAL6, SKAP1, C1orf112, FITM1, NAGA, FAM122A, CLIC3, ZDHHC7, MAP2K4, IRGC, STAT5B, FAM160B2, KIAA0513, TMEM175, ATL3, MOB1B, SSH3, DAPK2, ERC1, COA5, IL1B, PELI3, PRPF38A, GORASP2, FAM214B, BRF1, PDZK1, RING1, GTF3C6, RASSF8, RPA2, TEK, LOC90768, PFKFB1, POLR3C, HCK, ARL8B, SYT17, FN3KRP, MAGEA4, FAM213A, ROR1, KLK9, HSPA2, JAGN1, H2AFY, IGF1R, WAC, ETS1, BDNF, STARD10, TMCC2, CIAO1, CNPY2, TRIM16, MAB21L2, LAIR1, EFHD2, SPATA7, DNAAF2, KISS1, PRKAB1, GLB1L, TLL1, ART4, GNA12, CCDC14, METTL8, NUP50, KPNA4, FAM3B, RPS6KA5, RFWD3, SNURF, CAMK1, SMG5, FYCO1, TIMMDC1, SIX2, OTUB2, CHID1, GGCT, CCND3, ARID3B, EXOSC7, MRPL52, UBE2DNL, ODAM, NME6, PHLDA3, VPS35, NDUFA5, SNAP25, DCXR, INTS3, CALCOCO1, TBCK, PAEP, RNASE11, MYL10, TNFRSF14, PABPC3, CNOT7, ALOX5, TMEM35, TTLL6, GNA15, RABL3, METTL25, LYPLA2, LOC554223, ORMDL3, INS, TMOD4, GALNT12, CFHR2, TCP11L2, ZNF75A, PPP2R5E, SNRNP40, FCGR3A, NTM, AP4S1, SH3BGRL3, PRKCG, NOS1AP, ZNF581, KPTN, SLC17A5, MAST2, ALDH7A1, VAT1L, MTERF3, ANXA5, CASP4, PARP15, EPS8L2, WNT4, GADD45G, BTK, PCBP1, CASC4, HAUS6, ZFP36, RNF11, PTK6, CARS, TAP2, C1orf111, ZEB2, FLCN, MINA, MSTN, GPR12, TBC1D21, NUDT16P1, DPP3, TCEAL8, PIGG, UGT1A10, RNF138, CXCL14, DTD2, PTGIS, GTPBP8, PTPRO, NDUFAF7, MED9, CIRBP, AGFG2, SPINK6, RNF185, ARHGEF5, TMEM255A, SCO2, MS4A2, IFNA16, RPS21, TIPRL, PQBP1, RIOK1, CACNG2, EIF3F, MSI1, C6orf106, RBCK1, CYP20A1, ANKRD45, NMRK1, RAD51C, CACNG3, NXPE3, APITD1, HCP5, CYB5B, OSBPL5, ACAD11, MBNL1, RASSF3, SLC2A2, ABHD10, ANP32B, DHRSX, ACYP1, C14orf159, MAG, TNFSF13B, MOGAT3, OSTCP1, KRTAP10-7, RCBTB1, DIO3, TRIB3, PNPO, BCL2A1, RAB27A, RAPGEFL1, ZFYVE16, KLK2, PLS3, DRAM1, SF3A3, CAMKMT, ACTL7A, HPGD, ARFGAP3, RAB2B, PDK3, CCBL1, P2RY2, CATIP, TRIM47, DCAF7, C9orf72, SEPT12, SGCG, GIMAP6, MTCP1, OCIAD2, APEX1, POU2F1, CHAC2, NDUFB3, AIDA, CNDP1, ACTL6B, TRIM39, DIXDC1, EBP, LIMK1, RNF151, SLC38A2, ITGA6, C9orf142, OLFM4, NLN, AREG, DUSP3, PDCD7, VTN, NTRK3, C6orf203, ICAM3, FAM200A, FOXS1, ACBD4, AKAP1, SPEG, PSMB4, SLC22A6, IPO9, ATG13, CCT8, HAUS8, TRIB2, ODF4, ADI1, LSMEM2, MRPL48, HRASLS, IFNA5, MAPK8, DMKN, CDKN2D, PRDX2, C10orf88, RAB3D, C5orf28, FSIP1, MYL1, VSIG4, ATXN3, CEACAM6, IL1RL1, ATRAID, MED30, ETV4, TRIML1, PPARG, IFNA8, KCNIP4, TMEM261, NAAA, CEP250, ATG7, C11orf73, NMRK2, NUP62CL, PASD1, ZNF322, RPS25, ARMCX3, POLA2, ATF4, CHAF1B, PDZD9, KCNJ10, BSND, KIR2DL3, SERTM1, FAM134B, LSMEM1, C4orf22, PIGO, CLEC2B, C5orf15, TMEM183A, SCAND2P, LPAR3, LINC00663, CST2, PLCD1, COX4I1, CTNNB1, JTB, C1orf105, GOSR1, VDAC2, BOLA1, C2orf47, IARS, EVI2A, USP48, PDIA3, EPHB4, ATCAY, TBK1, PBRM1, COQ6, PDYN, TRAPPC4, FBXW9, SPRR4, TMUB1, DNAJC19, TMEM180, RMND5A, PLA1A, HERC2P9, PPP1CC, DHX16, PIM1, PKNOX1, NDUFS2, STOML3, GNPTAB, FAM3A, PDDC1, ANGPTL7, NAALADL2, DLK2, PSMA7, A2M, PSEN1, IFIT3, AP1M2, PRAM1, CDC37, EXOC6, MAST1, PAXIP1, PI4K2A, PSEN2, RAB3A, ECSIT, CFL1, APP, TM2D1, MAP3K11, MAPK8IP2, KIF1B, TPD52L2, TIRAP, FOS, PCBD1, JUN, MDM2, RANBP9, LRP1, BACE1, SNX17, SNX27, CUL7, MAPT, QRICH1, RNF2, EGFR, UBE2I, GSAP, SORL1, TMEM30A, USP25, FBXW11, SRP19, FAM27E3, RBM11, VCY, KIAA0020, LTV1, OR6B3, TUBG1, PINX1, ABT1, AGO1, TYMSOS, ZNF747, FGF13, UTP14A, MYC, RBM34, ZC3H3, HIST2H2AC, ADAM22, ERCC1, PES1, ATXN7L3, APOBEC3H, DDX49, RPL11, ZNF486, TBC1D26, ZNF385B, AKAP13, DNAJB7, PARD6A, RSL1D1, C1orf116, C16orf78, PURG, ALKBH8, FCF1, PNRC2, EHF, GLRB, CPED1, GPATCH2L, RAG1, ROBO3, FES, NCR1, THAP1, GRAMD1C, ST6GALNAC6, ZSCAN21, DNAJC30, ZNF449, PPP1R10, HDGF, ATP5O, S1PR1, GPR15, EEF1D, ZKSCAN8, TRAPPC9, TRIM46, HMGA1, THBS4, RFX5, HOXC4, ARHGAP15, TMCC1, ZNF641, LMF2, KATNA1, SGIP1, TMEM216, XRCC3, CASP3, CASP6, MAP3K5, NEFL, TGFB1, TGFB2, UCHL1, PTGS2, SRC, NF1, KDR, PTPN2, CES2, FRMD6, UTP11L, ZNF107, INHBE, ZNF431, SULF2, ZNF92, ZNF724P, ACADL, NME2, GSG2, CES3, GDF11, DNAJB9, TMEM30B, MAP7, OBSL1, F11, IL20RB, TIMP3, KEAP1, MAP7D1, ZNF445, AARS2, CBX6, COL18A1, CKAP2, C3orf17, CLEC12A, HS2ST1, PTCD2, QTRT1, TRIM25, TES

- Retained PPIs in in-frame fusion.

Partner

Gene

Hbp

Tbp

ENST

Strand

BPexon

TotalExon

Protein feature loci

*BPloci

TotalLen

Still interaction with

- Lost PPIs in in-frame fusion.

Partner

Gene

Hbp

Tbp

ENST

Strand

BPexon

TotalExon

Protein feature loci

*BPloci

TotalLen

Interaction lost with

- Retained PPIs, but lost function due to frame-shift fusion.

Partner

Gene

Hbp

Tbp

ENST

Strand

BPexon

TotalExon

Protein feature loci

*BPloci

TotalLen

Interaction lost with

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RelatedDrugs for PPP2R2A_APP

Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.0 2018-04-02)

Partner	Gene	UniProtAcc	DrugBank ID	Drug name	Drug activity	Drug type	Drug status
Tgene	APP	P05067	DB06782	Dimercaprol	Amyloid-beta A4 protein	small molecule	approved
Tgene	APP	P05067	DB09148	Florbetaben (18F)	Amyloid-beta A4 protein	small molecule	approved
Tgene	APP	P05067	DB00746	Deferoxamine	Amyloid-beta A4 protein	small molecule	approved\|investigational
Tgene	APP	P05067	DB01370	Aluminium	Amyloid-beta A4 protein	small molecule	approved\|investigational
Tgene	APP	P05067	DB01593	Zinc	Amyloid-beta A4 protein	small molecule	approved\|investigational
Tgene	APP	P05067	DB09149	Florbetapir (18F)	Amyloid-beta A4 protein	small molecule	approved\|investigational
Tgene	APP	P05067	DB09151	Flutemetamol (18F)	Amyloid-beta A4 protein	small molecule	approved\|investigational

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RelatedDiseases for PPP2R2A_APP

Diseases associated with fusion partners.
(DisGeNet 4.0)

Partner	Gene	Disease ID	Disease name	# pubmeds	Source
Hgene	PPP2R2A	C0013990	Pathological accumulation of air in tissues	1	CTD_human
Hgene	PPP2R2A	C1257806	Chromosomal Instability	1	CTD_human
Hgene	PPP2R2A	C1449861	Micronuclei, Chromosome-Defective	1	CTD_human
Tgene	APP	C0002395	Alzheimer's Disease	55	CTD_human;HPO;ORPHANET;UNIPROT
Tgene	APP	C0025261	Memory Disorders	12	CTD_human
Tgene	APP	C0027746	Nerve Degeneration	11	CTD_human
Tgene	APP	C0023186	Learning Disorders	6	CTD_human
Tgene	APP	C0011570	Mental Depression	5	PSYGENET
Tgene	APP	C0011581	Depressive disorder	5	PSYGENET
Tgene	APP	C2751536	CEREBRAL AMYLOID ANGIOPATHY, APP-RELATED	5	ORPHANET;UNIPROT
Tgene	APP	C0009241	Cognition Disorders	4	CTD_human
Tgene	APP	C0522224	Paralysed	4	CTD_human
Tgene	APP	C0524851	Neurodegenerative Disorders	2	CTD_human
Tgene	APP	C0600467	Neurogenic Inflammation	2	CTD_human
Tgene	APP	C2931672	Cerebral hemorrhage with amyloidosis, hereditary, Dutch type	2	CTD_human;ORPHANET
Tgene	APP	C0002622	Amnesia	1	CTD_human
Tgene	APP	C0002726	Amyloidosis	1	CTD_human
Tgene	APP	C0003469	Anxiety Disorders	1	CTD_human
Tgene	APP	C0005586	Bipolar Disorder	1	PSYGENET
Tgene	APP	C0006111	Brain Diseases	1	CTD_human
Tgene	APP	C0011573	Endogenous depression	1	PSYGENET
Tgene	APP	C0016667	Fragile X Syndrome	1	CTD_human
Tgene	APP	C0023893	Liver Cirrhosis, Experimental	1	CTD_human
Tgene	APP	C0027540	Necrosis	1	CTD_human
Tgene	APP	C0037928	Spinal Cord Diseases	1	CTD_human
Tgene	APP	C0038002	Splenomegaly	1	CTD_human
Tgene	APP	C0043094	Weight Gain	1	CTD_human
Tgene	APP	C0085220	Cerebral Amyloid Angiopathy	1	CTD_human;HPO
Tgene	APP	C0231341	Premature aging syndrome	1	CTD_human
Tgene	APP	C0338656	Impaired cognition	1	CTD_human
Tgene	APP	C0497327	Dementia	1	CTD_human;HPO
Tgene	APP	C2936349	Plaque, Amyloid	1	CTD_human

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Fusion gene ID: 28415

FusionGeneSummary for PPP2R2A_APP

FusionProtFeatures for PPP2R2A_APP

FusionGeneSequence for PPP2R2A_APP

FusionGenePPI for PPP2R2A_APP

RelatedDrugs for PPP2R2A_APP

RelatedDiseases for PPP2R2A_APP