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Fusion gene ID: 27643 |
FusionGeneSummary for PLEKHG5_TNFRSF8 |
Fusion gene summary |
Fusion gene information | Fusion gene name: PLEKHG5_TNFRSF8 | Fusion gene ID: 27643 | Hgene | Tgene | Gene symbol | PLEKHG5 | TNFRSF8 | Gene ID | 57449 | 943 |
Gene name | pleckstrin homology and RhoGEF domain containing G5 | TNF receptor superfamily member 8 | |
Synonyms | CMTRIC|DSMA4|GEF720|Syx|Tech | CD30|D1S166E|Ki-1 | |
Cytomap | 1p36.31 | 1p36.22 | |
Type of gene | protein-coding | protein-coding | |
Description | pleckstrin homology domain-containing family G member 5NFkB activating proteinPH domain-containing family G member 5guanine nucleotide exchange factor 720novel PH domain-containing proteinpleckstrin homology domain containing, family G (with RhoGef d | tumor necrosis factor receptor superfamily member 8CD30L receptorKi-1 antigencytokine receptor CD30lymphocyte activation antigen CD30 | |
Modification date | 20180519 | 20180522 | |
UniProtAcc | O94827 | P28908 | |
Ensembl transtripts involved in fusion gene | ENST00000377748, ENST00000377732, ENST00000400915, ENST00000377740, ENST00000377737, ENST00000537245, ENST00000544978, ENST00000400913, ENST00000340850, ENST00000377725, ENST00000377728, ENST00000535355, | ENST00000263932, ENST00000417814, ENST00000413146, ENST00000479933, | |
Fusion gene scores | * DoF score | 4 X 3 X 4=48 | 3 X 4 X 3=36 |
# samples | 4 | 3 | |
** MAII score | log2(4/48*10)=-0.263034405833794 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(3/36*10)=-0.263034405833794 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: PLEKHG5 [Title/Abstract] AND TNFRSF8 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Tgene | TNFRSF8 | GO:0042535 | positive regulation of tumor necrosis factor biosynthetic process | 16108830 |
Tgene | TNFRSF8 | GO:0043065 | positive regulation of apoptotic process | 16108830 |
Tgene | TNFRSF8 | GO:0045556 | positive regulation of TRAIL biosynthetic process | 16108830 |
Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | RV | LUAD | TCGA-MP-A4SW-01A | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
TCGA | LD | LUAD | TCGA-MP-A4SW-01A | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000377748 | ENST00000263932 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
In-frame | ENST00000377748 | ENST00000417814 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
5CDS-5UTR | ENST00000377748 | ENST00000413146 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
5CDS-intron | ENST00000377748 | ENST00000479933 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
In-frame | ENST00000377732 | ENST00000263932 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
In-frame | ENST00000377732 | ENST00000417814 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
5CDS-5UTR | ENST00000377732 | ENST00000413146 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
5CDS-intron | ENST00000377732 | ENST00000479933 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
In-frame | ENST00000400915 | ENST00000263932 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
In-frame | ENST00000400915 | ENST00000417814 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
5CDS-5UTR | ENST00000400915 | ENST00000413146 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
5CDS-intron | ENST00000400915 | ENST00000479933 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
In-frame | ENST00000377740 | ENST00000263932 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
In-frame | ENST00000377740 | ENST00000417814 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
5CDS-5UTR | ENST00000377740 | ENST00000413146 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
5CDS-intron | ENST00000377740 | ENST00000479933 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
5UTR-3CDS | ENST00000377737 | ENST00000263932 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
5UTR-3CDS | ENST00000377737 | ENST00000417814 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
5UTR-5UTR | ENST00000377737 | ENST00000413146 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
5UTR-intron | ENST00000377737 | ENST00000479933 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
In-frame | ENST00000537245 | ENST00000263932 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
In-frame | ENST00000537245 | ENST00000417814 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
5CDS-5UTR | ENST00000537245 | ENST00000413146 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
5CDS-intron | ENST00000537245 | ENST00000479933 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
5UTR-3CDS | ENST00000544978 | ENST00000263932 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
5UTR-3CDS | ENST00000544978 | ENST00000417814 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
5UTR-5UTR | ENST00000544978 | ENST00000413146 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
5UTR-intron | ENST00000544978 | ENST00000479933 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
intron-3CDS | ENST00000400913 | ENST00000263932 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
intron-3CDS | ENST00000400913 | ENST00000417814 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
intron-5UTR | ENST00000400913 | ENST00000413146 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
intron-intron | ENST00000400913 | ENST00000479933 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
intron-3CDS | ENST00000340850 | ENST00000263932 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
intron-3CDS | ENST00000340850 | ENST00000417814 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
intron-5UTR | ENST00000340850 | ENST00000413146 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
intron-intron | ENST00000340850 | ENST00000479933 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
intron-3CDS | ENST00000377725 | ENST00000263932 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
intron-3CDS | ENST00000377725 | ENST00000417814 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
intron-5UTR | ENST00000377725 | ENST00000413146 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
intron-intron | ENST00000377725 | ENST00000479933 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
intron-3CDS | ENST00000377728 | ENST00000263932 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
intron-3CDS | ENST00000377728 | ENST00000417814 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
intron-5UTR | ENST00000377728 | ENST00000413146 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
intron-intron | ENST00000377728 | ENST00000479933 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
intron-3CDS | ENST00000535355 | ENST00000263932 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
intron-3CDS | ENST00000535355 | ENST00000417814 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
intron-5UTR | ENST00000535355 | ENST00000413146 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
intron-intron | ENST00000535355 | ENST00000479933 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12198286 | + |
Frame-shift | ENST00000377748 | ENST00000263932 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
Frame-shift | ENST00000377748 | ENST00000417814 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
Frame-shift | ENST00000377748 | ENST00000413146 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
5CDS-3UTR | ENST00000377748 | ENST00000479933 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
Frame-shift | ENST00000377732 | ENST00000263932 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
Frame-shift | ENST00000377732 | ENST00000417814 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
Frame-shift | ENST00000377732 | ENST00000413146 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
5CDS-3UTR | ENST00000377732 | ENST00000479933 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
Frame-shift | ENST00000400915 | ENST00000263932 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
Frame-shift | ENST00000400915 | ENST00000417814 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
Frame-shift | ENST00000400915 | ENST00000413146 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
5CDS-3UTR | ENST00000400915 | ENST00000479933 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
Frame-shift | ENST00000377740 | ENST00000263932 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
Frame-shift | ENST00000377740 | ENST00000417814 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
Frame-shift | ENST00000377740 | ENST00000413146 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
5CDS-3UTR | ENST00000377740 | ENST00000479933 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
5UTR-3CDS | ENST00000377737 | ENST00000263932 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
5UTR-3CDS | ENST00000377737 | ENST00000417814 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
5UTR-3CDS | ENST00000377737 | ENST00000413146 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
5UTR-3UTR | ENST00000377737 | ENST00000479933 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
Frame-shift | ENST00000537245 | ENST00000263932 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
Frame-shift | ENST00000537245 | ENST00000417814 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
Frame-shift | ENST00000537245 | ENST00000413146 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
5CDS-3UTR | ENST00000537245 | ENST00000479933 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
5UTR-3CDS | ENST00000544978 | ENST00000263932 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
5UTR-3CDS | ENST00000544978 | ENST00000417814 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
5UTR-3CDS | ENST00000544978 | ENST00000413146 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
5UTR-3UTR | ENST00000544978 | ENST00000479933 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
intron-3CDS | ENST00000400913 | ENST00000263932 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
intron-3CDS | ENST00000400913 | ENST00000417814 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
intron-3CDS | ENST00000400913 | ENST00000413146 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
intron-3UTR | ENST00000400913 | ENST00000479933 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
intron-3CDS | ENST00000340850 | ENST00000263932 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
intron-3CDS | ENST00000340850 | ENST00000417814 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
intron-3CDS | ENST00000340850 | ENST00000413146 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
intron-3UTR | ENST00000340850 | ENST00000479933 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
intron-3CDS | ENST00000377725 | ENST00000263932 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
intron-3CDS | ENST00000377725 | ENST00000417814 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
intron-3CDS | ENST00000377725 | ENST00000413146 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
intron-3UTR | ENST00000377725 | ENST00000479933 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
intron-3CDS | ENST00000377728 | ENST00000263932 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
intron-3CDS | ENST00000377728 | ENST00000417814 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
intron-3CDS | ENST00000377728 | ENST00000413146 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
intron-3UTR | ENST00000377728 | ENST00000479933 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
intron-3CDS | ENST00000535355 | ENST00000263932 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
intron-3CDS | ENST00000535355 | ENST00000417814 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
intron-3CDS | ENST00000535355 | ENST00000413146 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
intron-3UTR | ENST00000535355 | ENST00000479933 | PLEKHG5 | chr1 | 6556553 | - | TNFRSF8 | chr1 | 12202344 | + |
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FusionProtFeatures for PLEKHG5_TNFRSF8 |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
PLEKHG5 | TNFRSF8 |
Receptor for TNFSF8/CD30L. May play a role in theregulation of cellular growth and transformation of activatedlymphoblasts. Regulates gene expression through activation of NF-kappa-B. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | >TNFRSF8 | chr1:6556553 | chr1:12198286 | ENST00000413146 | + | 2 | 5 | 347_377 | -18 | 133 | Compositional bias | Note=Pro/Ser/Thr-rich |
Tgene | >TNFRSF8 | chr1:6556553 | chr1:12198286 | ENST00000413146 | + | 2 | 5 | 107_150 | -18 | 133 | Repeat | Note=TNFR-Cys 3 |
Tgene | >TNFRSF8 | chr1:6556553 | chr1:12198286 | ENST00000413146 | + | 2 | 5 | 205_241 | -18 | 133 | Repeat | Note=TNFR-Cys 4 |
Tgene | >TNFRSF8 | chr1:6556553 | chr1:12198286 | ENST00000413146 | + | 2 | 5 | 243_281 | -18 | 133 | Repeat | Note=TNFR-Cys 5 |
Tgene | >TNFRSF8 | chr1:6556553 | chr1:12198286 | ENST00000413146 | + | 2 | 5 | 282_325 | -18 | 133 | Repeat | Note=TNFR-Cys 6 |
Tgene | >TNFRSF8 | chr1:6556553 | chr1:12198286 | ENST00000413146 | + | 2 | 5 | 28_66 | -18 | 133 | Repeat | Note=TNFR-Cys 1 |
Tgene | >TNFRSF8 | chr1:6556553 | chr1:12198286 | ENST00000413146 | + | 2 | 5 | 68_106 | -18 | 133 | Repeat | Note=TNFR-Cys 2 |
Tgene | >TNFRSF8 | chr1:6556553 | chr1:12198286 | ENST00000413146 | + | 2 | 5 | 19_379 | -18 | 133 | Topological domain | Extracellular |
Tgene | >TNFRSF8 | chr1:6556553 | chr1:12198286 | ENST00000413146 | + | 2 | 5 | 408_595 | -18 | 133 | Topological domain | Cytoplasmic |
Tgene | >TNFRSF8 | chr1:6556553 | chr1:12198286 | ENST00000413146 | + | 2 | 5 | 380_407 | -18 | 133 | Transmembrane | Helical |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | >PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000340850 | - | 1 | 21 | 761_781 | -75 | 1007 | Compositional bias | Note=Glu-rich |
Hgene | >PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000340850 | - | 1 | 21 | 94_99 | -75 | 1007 | Compositional bias | Note=Poly-Glu |
Hgene | >PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000377725 | - | 1 | 22 | 761_781 | -71 | 1020 | Compositional bias | Note=Glu-rich |
Hgene | >PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000377725 | - | 1 | 22 | 94_99 | -71 | 1020 | Compositional bias | Note=Poly-Glu |
Hgene | >PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000377728 | - | 1 | 21 | 761_781 | -51 | 1007 | Compositional bias | Note=Glu-rich |
Hgene | >PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000377728 | - | 1 | 21 | 94_99 | -51 | 1007 | Compositional bias | Note=Poly-Glu |
Hgene | >PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000377732 | - | 1 | 21 | 761_781 | 8 | 1044 | Compositional bias | Note=Glu-rich |
Hgene | >PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000377732 | - | 1 | 21 | 94_99 | 8 | 1044 | Compositional bias | Note=Poly-Glu |
Hgene | >PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000377737 | - | 2 | 22 | 761_781 | -29 | 1007 | Compositional bias | Note=Glu-rich |
Hgene | >PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000377737 | - | 2 | 22 | 94_99 | -29 | 1007 | Compositional bias | Note=Poly-Glu |
Hgene | >PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000377748 | - | 2 | 22 | 761_781 | 48 | 1084 | Compositional bias | Note=Glu-rich |
Hgene | >PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000377748 | - | 2 | 22 | 94_99 | 48 | 1084 | Compositional bias | Note=Poly-Glu |
Hgene | >PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000400913 | - | 1 | 21 | 761_781 | -69 | 1007 | Compositional bias | Note=Glu-rich |
Hgene | >PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000400913 | - | 1 | 21 | 94_99 | -69 | 1007 | Compositional bias | Note=Poly-Glu |
Hgene | >PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000400915 | - | 2 | 22 | 761_781 | 27 | 1063 | Compositional bias | Note=Glu-rich |
Hgene | >PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000400915 | - | 2 | 22 | 94_99 | 27 | 1063 | Compositional bias | Note=Poly-Glu |
Hgene | >PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000535355 | - | 1 | 21 | 761_781 | -9 | 1076 | Compositional bias | Note=Glu-rich |
Hgene | >PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000535355 | - | 1 | 21 | 94_99 | -9 | 1076 | Compositional bias | Note=Poly-Glu |
Hgene | >PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000537245 | - | 2 | 22 | 761_781 | 50 | 1086 | Compositional bias | Note=Glu-rich |
Hgene | >PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000537245 | - | 2 | 22 | 94_99 | 50 | 1086 | Compositional bias | Note=Poly-Glu |
Hgene | >PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000544978 | - | 2 | 22 | 761_781 | -29 | 931 | Compositional bias | Note=Glu-rich |
Hgene | >PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000544978 | - | 2 | 22 | 94_99 | -29 | 931 | Compositional bias | Note=Poly-Glu |
Hgene | >PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000340850 | - | 1 | 21 | 392_584 | -75 | 1007 | Domain | DH |
Hgene | >PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000340850 | - | 1 | 21 | 640_740 | -75 | 1007 | Domain | PH |
Hgene | >PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000377725 | - | 1 | 22 | 392_584 | -71 | 1020 | Domain | DH |
Hgene | >PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000377725 | - | 1 | 22 | 640_740 | -71 | 1020 | Domain | PH |
Hgene | >PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000377728 | - | 1 | 21 | 392_584 | -51 | 1007 | Domain | DH |
Hgene | >PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000377728 | - | 1 | 21 | 640_740 | -51 | 1007 | Domain | PH |
Hgene | >PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000377732 | - | 1 | 21 | 392_584 | 8 | 1044 | Domain | DH |
Hgene | >PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000377732 | - | 1 | 21 | 640_740 | 8 | 1044 | Domain | PH |
Hgene | >PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000377737 | - | 2 | 22 | 392_584 | -29 | 1007 | Domain | DH |
Hgene | >PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000377737 | - | 2 | 22 | 640_740 | -29 | 1007 | Domain | PH |
Hgene | >PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000377748 | - | 2 | 22 | 392_584 | 48 | 1084 | Domain | DH |
Hgene | >PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000377748 | - | 2 | 22 | 640_740 | 48 | 1084 | Domain | PH |
Hgene | >PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000400913 | - | 1 | 21 | 392_584 | -69 | 1007 | Domain | DH |
Hgene | >PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000400913 | - | 1 | 21 | 640_740 | -69 | 1007 | Domain | PH |
Hgene | >PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000400915 | - | 2 | 22 | 392_584 | 27 | 1063 | Domain | DH |
Hgene | >PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000400915 | - | 2 | 22 | 640_740 | 27 | 1063 | Domain | PH |
Hgene | >PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000535355 | - | 1 | 21 | 392_584 | -9 | 1076 | Domain | DH |
Hgene | >PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000535355 | - | 1 | 21 | 640_740 | -9 | 1076 | Domain | PH |
Hgene | >PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000537245 | - | 2 | 22 | 392_584 | 50 | 1086 | Domain | DH |
Hgene | >PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000537245 | - | 2 | 22 | 640_740 | 50 | 1086 | Domain | PH |
Hgene | >PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000544978 | - | 2 | 22 | 392_584 | -29 | 931 | Domain | DH |
Hgene | >PLEKHG5 | chr1:6556553 | chr1:12198286 | ENST00000544978 | - | 2 | 22 | 640_740 | -29 | 931 | Domain | PH |
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FusionGeneSequence for PLEKHG5_TNFRSF8 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_PLEKHG5_ENST00000377748_chr1_6556553_-_TNFRSF8_ENST00000263932_chr1_12198286_+_199aa MNSVLTKHGSPPRSWLSLCSGTDDQSPAEKKGLRCQNPACMDKGRAAKQLRSGASVTEPVAEERGLMSQPLMETCHSVGAAYLESLPLQD ASPAGGPSSPRDLPEPRVSTEHTNNKIEKIYIMKADTVIVGTVKAELPEGRGLAGPAEPELEEELEADHTPHYPEQETEPPLGSCSDVML >In-frame_PLEKHG5_ENST00000377748_chr1_6556553_-_TNFRSF8_ENST00000417814_chr1_12198286_+_198aa MNSVLTKHGSPPRSWLSLCSGTDDQSPAEKKGLRCQNPACMDKGRAAKLRSGASVTEPVAEERGLMSQPLMETCHSVGAAYLESLPLQDA SPAGGPSSPRDLPEPRVSTEHTNNKIEKIYIMKADTVIVGTVKAELPEGRGLAGPAEPELEEELEADHTPHYPEQETEPPLGSCSDVMLS >In-frame_PLEKHG5_ENST00000377732_chr1_6556553_-_TNFRSF8_ENST00000263932_chr1_12198286_+_159aa MDKGRAAKQLRSGASVTEPVAEERGLMSQPLMETCHSVGAAYLESLPLQDASPAGGPSSPRDLPEPRVSTEHTNNKIEKIYIMKADTVIV >In-frame_PLEKHG5_ENST00000377732_chr1_6556553_-_TNFRSF8_ENST00000417814_chr1_12198286_+_158aa MDKGRAAKLRSGASVTEPVAEERGLMSQPLMETCHSVGAAYLESLPLQDASPAGGPSSPRDLPEPRVSTEHTNNKIEKIYIMKADTVIVG >In-frame_PLEKHG5_ENST00000400915_chr1_6556553_-_TNFRSF8_ENST00000263932_chr1_12198286_+_178aa MDDQSPAEKKGLRCQNPACMDKGRAAKQLRSGASVTEPVAEERGLMSQPLMETCHSVGAAYLESLPLQDASPAGGPSSPRDLPEPRVSTE >In-frame_PLEKHG5_ENST00000400915_chr1_6556553_-_TNFRSF8_ENST00000417814_chr1_12198286_+_177aa MDDQSPAEKKGLRCQNPACMDKGRAAKLRSGASVTEPVAEERGLMSQPLMETCHSVGAAYLESLPLQDASPAGGPSSPRDLPEPRVSTEH >In-frame_PLEKHG5_ENST00000377740_chr1_6556553_-_TNFRSF8_ENST00000263932_chr1_12198286_+_199aa MNSVLTKHGSPPRSWLSLCSGTDDQSPAEKKGLRCQNPACMDKGRAAKQLRSGASVTEPVAEERGLMSQPLMETCHSVGAAYLESLPLQD ASPAGGPSSPRDLPEPRVSTEHTNNKIEKIYIMKADTVIVGTVKAELPEGRGLAGPAEPELEEELEADHTPHYPEQETEPPLGSCSDVML >In-frame_PLEKHG5_ENST00000377740_chr1_6556553_-_TNFRSF8_ENST00000417814_chr1_12198286_+_198aa MNSVLTKHGSPPRSWLSLCSGTDDQSPAEKKGLRCQNPACMDKGRAAKLRSGASVTEPVAEERGLMSQPLMETCHSVGAAYLESLPLQDA SPAGGPSSPRDLPEPRVSTEHTNNKIEKIYIMKADTVIVGTVKAELPEGRGLAGPAEPELEEELEADHTPHYPEQETEPPLGSCSDVMLS >In-frame_PLEKHG5_ENST00000537245_chr1_6556553_-_TNFRSF8_ENST00000263932_chr1_12198286_+_201aa MSLGERGSPQTFGGSSVSKGSDAGHDQSPAEKKGLRCQNPACMDKGRAAKQLRSGASVTEPVAEERGLMSQPLMETCHSVGAAYLESLPL QDASPAGGPSSPRDLPEPRVSTEHTNNKIEKIYIMKADTVIVGTVKAELPEGRGLAGPAEPELEEELEADHTPHYPEQETEPPLGSCSDV >In-frame_PLEKHG5_ENST00000537245_chr1_6556553_-_TNFRSF8_ENST00000417814_chr1_12198286_+_200aa MSLGERGSPQTFGGSSVSKGSDAGHDQSPAEKKGLRCQNPACMDKGRAAKLRSGASVTEPVAEERGLMSQPLMETCHSVGAAYLESLPLQ DASPAGGPSSPRDLPEPRVSTEHTNNKIEKIYIMKADTVIVGTVKAELPEGRGLAGPAEPELEEELEADHTPHYPEQETEPPLGSCSDVM |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_PLEKHG5_ENST00000377748_chr1_6556553_-_TNFRSF8_ENST00000263932_chr1_12198286_+_597nt ATGAATTCAGTCCTGACAAAACATGGGTCTCCACCTCGAAGCTGGCTCAGCCTTTGTTCAGGAACCGACGACCAGAGCCCCGCTGAAAAG AAGGGACTGCGCTGTCAGAACCCCGCCTGCATGGACAAGGGGCGGGCGGCCAAGCAGCTGAGGAGTGGTGCGTCGGTGACAGAACCCGTC GCGGAAGAGCGAGGGTTAATGAGCCAGCCACTGATGGAGACCTGCCACAGCGTGGGGGCAGCCTACCTGGAGAGCCTGCCGCTGCAGGAT GCCAGCCCGGCCGGGGGCCCCTCGTCCCCCAGGGACCTTCCTGAGCCCCGGGTGTCCACGGAGCACACCAATAACAAGATTGAGAAAATC TACATCATGAAGGCTGACACCGTGATCGTGGGGACCGTGAAGGCTGAGCTGCCGGAGGGCCGGGGCCTGGCGGGGCCAGCAGAGCCCGAG TTGGAGGAGGAGCTGGAGGCGGACCATACCCCCCACTACCCCGAGCAGGAGACAGAACCGCCTCTGGGCAGCTGCAGCGATGTCATGCTC >In-frame_PLEKHG5_ENST00000377748_chr1_6556553_-_TNFRSF8_ENST00000417814_chr1_12198286_+_594nt ATGAATTCAGTCCTGACAAAACATGGGTCTCCACCTCGAAGCTGGCTCAGCCTTTGTTCAGGAACCGACGACCAGAGCCCCGCTGAAAAG AAGGGACTGCGCTGTCAGAACCCCGCCTGCATGGACAAGGGGCGGGCGGCCAAGCTGAGGAGTGGTGCGTCGGTGACAGAACCCGTCGCG GAAGAGCGAGGGTTAATGAGCCAGCCACTGATGGAGACCTGCCACAGCGTGGGGGCAGCCTACCTGGAGAGCCTGCCGCTGCAGGATGCC AGCCCGGCCGGGGGCCCCTCGTCCCCCAGGGACCTTCCTGAGCCCCGGGTGTCCACGGAGCACACCAATAACAAGATTGAGAAAATCTAC ATCATGAAGGCTGACACCGTGATCGTGGGGACCGTGAAGGCTGAGCTGCCGGAGGGCCGGGGCCTGGCGGGGCCAGCAGAGCCCGAGTTG GAGGAGGAGCTGGAGGCGGACCATACCCCCCACTACCCCGAGCAGGAGACAGAACCGCCTCTGGGCAGCTGCAGCGATGTCATGCTCTCA >In-frame_PLEKHG5_ENST00000377732_chr1_6556553_-_TNFRSF8_ENST00000263932_chr1_12198286_+_477nt ATGGACAAGGGGCGGGCGGCCAAGCAGCTGAGGAGTGGTGCGTCGGTGACAGAACCCGTCGCGGAAGAGCGAGGGTTAATGAGCCAGCCA CTGATGGAGACCTGCCACAGCGTGGGGGCAGCCTACCTGGAGAGCCTGCCGCTGCAGGATGCCAGCCCGGCCGGGGGCCCCTCGTCCCCC AGGGACCTTCCTGAGCCCCGGGTGTCCACGGAGCACACCAATAACAAGATTGAGAAAATCTACATCATGAAGGCTGACACCGTGATCGTG GGGACCGTGAAGGCTGAGCTGCCGGAGGGCCGGGGCCTGGCGGGGCCAGCAGAGCCCGAGTTGGAGGAGGAGCTGGAGGCGGACCATACC CCCCACTACCCCGAGCAGGAGACAGAACCGCCTCTGGGCAGCTGCAGCGATGTCATGCTCTCAGTGGAAGAGGAAGGGAAAGAAGACCCC >In-frame_PLEKHG5_ENST00000377732_chr1_6556553_-_TNFRSF8_ENST00000417814_chr1_12198286_+_474nt ATGGACAAGGGGCGGGCGGCCAAGCTGAGGAGTGGTGCGTCGGTGACAGAACCCGTCGCGGAAGAGCGAGGGTTAATGAGCCAGCCACTG ATGGAGACCTGCCACAGCGTGGGGGCAGCCTACCTGGAGAGCCTGCCGCTGCAGGATGCCAGCCCGGCCGGGGGCCCCTCGTCCCCCAGG GACCTTCCTGAGCCCCGGGTGTCCACGGAGCACACCAATAACAAGATTGAGAAAATCTACATCATGAAGGCTGACACCGTGATCGTGGGG ACCGTGAAGGCTGAGCTGCCGGAGGGCCGGGGCCTGGCGGGGCCAGCAGAGCCCGAGTTGGAGGAGGAGCTGGAGGCGGACCATACCCCC CACTACCCCGAGCAGGAGACAGAACCGCCTCTGGGCAGCTGCAGCGATGTCATGCTCTCAGTGGAAGAGGAAGGGAAAGAAGACCCCTTG >In-frame_PLEKHG5_ENST00000400915_chr1_6556553_-_TNFRSF8_ENST00000263932_chr1_12198286_+_534nt ATGGACGACCAGAGCCCCGCTGAAAAGAAGGGACTGCGCTGTCAGAACCCCGCCTGCATGGACAAGGGGCGGGCGGCCAAGCAGCTGAGG AGTGGTGCGTCGGTGACAGAACCCGTCGCGGAAGAGCGAGGGTTAATGAGCCAGCCACTGATGGAGACCTGCCACAGCGTGGGGGCAGCC TACCTGGAGAGCCTGCCGCTGCAGGATGCCAGCCCGGCCGGGGGCCCCTCGTCCCCCAGGGACCTTCCTGAGCCCCGGGTGTCCACGGAG CACACCAATAACAAGATTGAGAAAATCTACATCATGAAGGCTGACACCGTGATCGTGGGGACCGTGAAGGCTGAGCTGCCGGAGGGCCGG GGCCTGGCGGGGCCAGCAGAGCCCGAGTTGGAGGAGGAGCTGGAGGCGGACCATACCCCCCACTACCCCGAGCAGGAGACAGAACCGCCT >In-frame_PLEKHG5_ENST00000400915_chr1_6556553_-_TNFRSF8_ENST00000417814_chr1_12198286_+_531nt ATGGACGACCAGAGCCCCGCTGAAAAGAAGGGACTGCGCTGTCAGAACCCCGCCTGCATGGACAAGGGGCGGGCGGCCAAGCTGAGGAGT GGTGCGTCGGTGACAGAACCCGTCGCGGAAGAGCGAGGGTTAATGAGCCAGCCACTGATGGAGACCTGCCACAGCGTGGGGGCAGCCTAC CTGGAGAGCCTGCCGCTGCAGGATGCCAGCCCGGCCGGGGGCCCCTCGTCCCCCAGGGACCTTCCTGAGCCCCGGGTGTCCACGGAGCAC ACCAATAACAAGATTGAGAAAATCTACATCATGAAGGCTGACACCGTGATCGTGGGGACCGTGAAGGCTGAGCTGCCGGAGGGCCGGGGC CTGGCGGGGCCAGCAGAGCCCGAGTTGGAGGAGGAGCTGGAGGCGGACCATACCCCCCACTACCCCGAGCAGGAGACAGAACCGCCTCTG >In-frame_PLEKHG5_ENST00000377740_chr1_6556553_-_TNFRSF8_ENST00000263932_chr1_12198286_+_597nt ATGAATTCAGTCCTGACAAAACATGGGTCTCCACCTCGAAGCTGGCTCAGCCTTTGTTCAGGAACCGACGACCAGAGCCCCGCTGAAAAG AAGGGACTGCGCTGTCAGAACCCCGCCTGCATGGACAAGGGGCGGGCGGCCAAGCAGCTGAGGAGTGGTGCGTCGGTGACAGAACCCGTC GCGGAAGAGCGAGGGTTAATGAGCCAGCCACTGATGGAGACCTGCCACAGCGTGGGGGCAGCCTACCTGGAGAGCCTGCCGCTGCAGGAT GCCAGCCCGGCCGGGGGCCCCTCGTCCCCCAGGGACCTTCCTGAGCCCCGGGTGTCCACGGAGCACACCAATAACAAGATTGAGAAAATC TACATCATGAAGGCTGACACCGTGATCGTGGGGACCGTGAAGGCTGAGCTGCCGGAGGGCCGGGGCCTGGCGGGGCCAGCAGAGCCCGAG TTGGAGGAGGAGCTGGAGGCGGACCATACCCCCCACTACCCCGAGCAGGAGACAGAACCGCCTCTGGGCAGCTGCAGCGATGTCATGCTC >In-frame_PLEKHG5_ENST00000377740_chr1_6556553_-_TNFRSF8_ENST00000417814_chr1_12198286_+_594nt ATGAATTCAGTCCTGACAAAACATGGGTCTCCACCTCGAAGCTGGCTCAGCCTTTGTTCAGGAACCGACGACCAGAGCCCCGCTGAAAAG AAGGGACTGCGCTGTCAGAACCCCGCCTGCATGGACAAGGGGCGGGCGGCCAAGCTGAGGAGTGGTGCGTCGGTGACAGAACCCGTCGCG GAAGAGCGAGGGTTAATGAGCCAGCCACTGATGGAGACCTGCCACAGCGTGGGGGCAGCCTACCTGGAGAGCCTGCCGCTGCAGGATGCC AGCCCGGCCGGGGGCCCCTCGTCCCCCAGGGACCTTCCTGAGCCCCGGGTGTCCACGGAGCACACCAATAACAAGATTGAGAAAATCTAC ATCATGAAGGCTGACACCGTGATCGTGGGGACCGTGAAGGCTGAGCTGCCGGAGGGCCGGGGCCTGGCGGGGCCAGCAGAGCCCGAGTTG GAGGAGGAGCTGGAGGCGGACCATACCCCCCACTACCCCGAGCAGGAGACAGAACCGCCTCTGGGCAGCTGCAGCGATGTCATGCTCTCA >In-frame_PLEKHG5_ENST00000537245_chr1_6556553_-_TNFRSF8_ENST00000263932_chr1_12198286_+_603nt ATGAGTCTTGGGGAACGGGGGTCGCCCCAGACCTTCGGGGGCTCCTCTGTCTCTAAAGGGAGCGATGCAGGGCACGACCAGAGCCCCGCT GAAAAGAAGGGACTGCGCTGTCAGAACCCCGCCTGCATGGACAAGGGGCGGGCGGCCAAGCAGCTGAGGAGTGGTGCGTCGGTGACAGAA CCCGTCGCGGAAGAGCGAGGGTTAATGAGCCAGCCACTGATGGAGACCTGCCACAGCGTGGGGGCAGCCTACCTGGAGAGCCTGCCGCTG CAGGATGCCAGCCCGGCCGGGGGCCCCTCGTCCCCCAGGGACCTTCCTGAGCCCCGGGTGTCCACGGAGCACACCAATAACAAGATTGAG AAAATCTACATCATGAAGGCTGACACCGTGATCGTGGGGACCGTGAAGGCTGAGCTGCCGGAGGGCCGGGGCCTGGCGGGGCCAGCAGAG CCCGAGTTGGAGGAGGAGCTGGAGGCGGACCATACCCCCCACTACCCCGAGCAGGAGACAGAACCGCCTCTGGGCAGCTGCAGCGATGTC >In-frame_PLEKHG5_ENST00000537245_chr1_6556553_-_TNFRSF8_ENST00000417814_chr1_12198286_+_600nt ATGAGTCTTGGGGAACGGGGGTCGCCCCAGACCTTCGGGGGCTCCTCTGTCTCTAAAGGGAGCGATGCAGGGCACGACCAGAGCCCCGCT GAAAAGAAGGGACTGCGCTGTCAGAACCCCGCCTGCATGGACAAGGGGCGGGCGGCCAAGCTGAGGAGTGGTGCGTCGGTGACAGAACCC GTCGCGGAAGAGCGAGGGTTAATGAGCCAGCCACTGATGGAGACCTGCCACAGCGTGGGGGCAGCCTACCTGGAGAGCCTGCCGCTGCAG GATGCCAGCCCGGCCGGGGGCCCCTCGTCCCCCAGGGACCTTCCTGAGCCCCGGGTGTCCACGGAGCACACCAATAACAAGATTGAGAAA ATCTACATCATGAAGGCTGACACCGTGATCGTGGGGACCGTGAAGGCTGAGCTGCCGGAGGGCCGGGGCCTGGCGGGGCCAGCAGAGCCC GAGTTGGAGGAGGAGCTGGAGGCGGACCATACCCCCCACTACCCCGAGCAGGAGACAGAACCGCCTCTGGGCAGCTGCAGCGATGTCATG |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_PLEKHG5_ENST00000377748_chr1_6556553_-_TNFRSF8_ENST00000263932_chr1_12198286_+_2771nt AAACTAAGGCCTTCCTGGTAGCCAAGGAGCCCAGCAGAGGGGCTGCTGCTGGCTGCTGGGATTGCAGAGGCCGGGGTCTCTGTGGTGTTG CTTTCCTGGAAAGGAGGGACGGCACCTCCAGGGCAGCCAGCAGTGTGGGAGCCCATTCCAGGGCGCAAATGGGCACTCAGGAATGGAAAA TCCAAGAAGGAACCAACCACCAACAAGGAAATGCAGTGTGAGCGGCGGCTGCGAAGTCTGTGCCTTCAAATATACAGCGCCCAGGGGACC TGTGTTGGACGGGGAGCAAATTGGCAGGGCTGAGAGCGCCTTGGTTTTCTGTGCAGACAGGTCCAGCTGCAGAAATTAAGACTGGGGCTG AGTCGGGGAGAAGCCTTCCATGTTGAGATGGCAACTGGGCAAAGCAGGACGGAGACCTGTGTGTCTGATTAGAGAGGCCTGTGGCATTGG CATGTGGCTGGAGGTCCAGGCAGGGTGCCACCACCGCAGAGGTCAAGCATGAATTCAGTCCTGACAAAACATGGGTCTCCACCTCGAAGC TGGCTCAGCCTTTGTTCAGGAACCGACGACCAGAGCCCCGCTGAAAAGAAGGGACTGCGCTGTCAGAACCCCGCCTGCATGGACAAGGGG CGGGCGGCCAAGCAGCTGAGGAGTGGTGCGTCGGTGACAGAACCCGTCGCGGAAGAGCGAGGGTTAATGAGCCAGCCACTGATGGAGACC TGCCACAGCGTGGGGGCAGCCTACCTGGAGAGCCTGCCGCTGCAGGATGCCAGCCCGGCCGGGGGCCCCTCGTCCCCCAGGGACCTTCCT GAGCCCCGGGTGTCCACGGAGCACACCAATAACAAGATTGAGAAAATCTACATCATGAAGGCTGACACCGTGATCGTGGGGACCGTGAAG GCTGAGCTGCCGGAGGGCCGGGGCCTGGCGGGGCCAGCAGAGCCCGAGTTGGAGGAGGAGCTGGAGGCGGACCATACCCCCCACTACCCC GAGCAGGAGACAGAACCGCCTCTGGGCAGCTGCAGCGATGTCATGCTCTCAGTGGAAGAGGAAGGGAAAGAAGACCCCTTGCCCACAGCT GCCTCTGGAAAGTGAGGCCTGGGCTGGGCTGGGGCTAGGAGGGCAGCAGGGTGGCCTCTGGGAGGCCAGGATGGCACTGTTGGCACCGAG GTTGGGGGCAGAGGCCCATCTGGCCTGAACTGAGGCTCCAGCATCTAGTGGTGGACCGGCCGGTCACTGCAGGGGTCTGGTGGTCTCTGC TTGCATCCCCAACTTAGCTGTCCCCTGACCCAGAGCCTAGGGGATCCGGGGCTTGTACAGAAGAGACAGTCCAAGGGGACTGGATCCCAG CAGTGATGTTGGTTGAGGCAGCAAACAGATGGCAGGATGGGCACTGCCGAGAACAGCATTGGTCCCAGAGCCCTGGGCATCAGACCTTAA CCACCAGGCCCACAGCCCAGCGAGGGAGAGGTCGTGAGGCCAGCTCCCGGGGCCCCTGTAACCCTACTCTCCTCTCTCCCTGGACCTCAG AGGTGACACCCATTGGGCCCTTCCGGCATGCCCCCAGTTACTGTAAATGTGGCCCCCAGTGGGCATGGAGCCAGTGCCTGTGGTTGTTTC TCCAGAGTCAAAAGGGAAGTCGAGGGATGGGGCGTCGTCAGCTGGCACTGTCTCTGCTGCAGCGGCCACACTGTACTCTGCACTGGTGTG AGGGCCCCTGCCTGGACTGTGGGACCCTCCTGGTGCTGCCCACCTTCCCTGTCCTGTAGCCCCCTCGGTGGGCCCAGGGCCTAGGGCCCA GGATCAAGTCACTCATCTCAGAATGTCCCCACCAATCCCCGCCACAGCAGGCGCCTCGGGTCCCAGATGTCTGCAGCCCTCAGCAGCTGC AGACCGCCCCTCACCAACCCAGAGAACCTGCTTTACTTTGCCCAGGGACTTCCTCCCCATGTGAACATGGGGAACTTCGGGCCCTGCCTG GAGTCCTTGACCGCTCTCTGTGGGCCCCACCCACTCTGTCCTGGGAAATGAAGAAGCATCTTCCTTAGGTCTGCCCTGCTTGCAAATCCA CTAGCACCGACCCCACCACCTGGTTCCGGCTCTGCACGCTTTGGGGTGTGGATGTCGAGAGGCACCACGGCCTCACCCAGGCATCTGCTT TACTCTGGACCATAGGAAACAAGACCGTTTGGAGGTTTCATCAGGATTTTGGGTTTTTCACATTTCACGCTAAGGAGTAGTGGCCCTGAC TTCCGGTCGGCTGGCCAGCTGACTCCCTAGGGCCTTCAGACGTGTATGCAAATGAGTGATGGATAAGGATGAGTCTTGGAGTTGCGGGCA GCCTGGAGACTCGTGGACTTACCGCCTGGAGGCAGGCCCGGGAAGGCTGCTGTTTACTCATCGGGCAGCCACGTGCTCTCTGGAGGAAGT GATAGTTTCTGAAACCGCTCAGATGTTTTGGGGAAAGTTGGAGAAGCCGTGGCCTTGCGAGAGGTGGTTACACCAGAACCTGGACATTGG CCAGAAGAAGCTTAAGTGGGCAGACACTGTTTGCCCAGTGTTTGTGCAAGGATGGAGTGGGTGTCTCTGCATCACCCACAGCCGCAGCTG TAAGGCACGCTGGAAGGCACACGCCTGCCAGGCAGGGCAGTCTGGCGCCCATGATGGGAGGGATTGACATGTTTCAACAAAATAATGCAC >In-frame_PLEKHG5_ENST00000377748_chr1_6556553_-_TNFRSF8_ENST00000417814_chr1_12198286_+_1678nt AAACTAAGGCCTTCCTGGTAGCCAAGGAGCCCAGCAGAGGGGCTGCTGCTGGCTGCTGGGATTGCAGAGGCCGGGGTCTCTGTGGTGTTG CTTTCCTGGAAAGGAGGGACGGCACCTCCAGGGCAGCCAGCAGTGTGGGAGCCCATTCCAGGGCGCAAATGGGCACTCAGGAATGGAAAA TCCAAGAAGGAACCAACCACCAACAAGGAAATGCAGTGTGAGCGGCGGCTGCGAAGTCTGTGCCTTCAAATATACAGCGCCCAGGGGACC TGTGTTGGACGGGGAGCAAATTGGCAGGGCTGAGAGCGCCTTGGTTTTCTGTGCAGACAGGTCCAGCTGCAGAAATTAAGACTGGGGCTG AGTCGGGGAGAAGCCTTCCATGTTGAGATGGCAACTGGGCAAAGCAGGACGGAGACCTGTGTGTCTGATTAGAGAGGCCTGTGGCATTGG CATGTGGCTGGAGGTCCAGGCAGGGTGCCACCACCGCAGAGGTCAAGCATGAATTCAGTCCTGACAAAACATGGGTCTCCACCTCGAAGC TGGCTCAGCCTTTGTTCAGGAACCGACGACCAGAGCCCCGCTGAAAAGAAGGGACTGCGCTGTCAGAACCCCGCCTGCATGGACAAGGGG CGGGCGGCCAAGCTGAGGAGTGGTGCGTCGGTGACAGAACCCGTCGCGGAAGAGCGAGGGTTAATGAGCCAGCCACTGATGGAGACCTGC CACAGCGTGGGGGCAGCCTACCTGGAGAGCCTGCCGCTGCAGGATGCCAGCCCGGCCGGGGGCCCCTCGTCCCCCAGGGACCTTCCTGAG CCCCGGGTGTCCACGGAGCACACCAATAACAAGATTGAGAAAATCTACATCATGAAGGCTGACACCGTGATCGTGGGGACCGTGAAGGCT GAGCTGCCGGAGGGCCGGGGCCTGGCGGGGCCAGCAGAGCCCGAGTTGGAGGAGGAGCTGGAGGCGGACCATACCCCCCACTACCCCGAG CAGGAGACAGAACCGCCTCTGGGCAGCTGCAGCGATGTCATGCTCTCAGTGGAAGAGGAAGGGAAAGAAGACCCCTTGCCCACAGCTGCC TCTGGAAAGTGAGGCCTGGGCTGGGCTGGGGCTAGGAGGGCAGCAGGGTGGCCTCTGGGAGGCCAGGATGGCACTGTTGGCACCGAGGTT GGGGGCAGAGGCCCATCTGGCCTGAACTGAGGCTCCAGCATCTAGTGGTGGACCGGCCGGTCACTGCAGGGGTCTGGTGGTCTCTGCTTG CATCCCCAACTTAGCTGTCCCCTGACCCAGAGCCTAGGGGATCCGGGGCTTGTACAGAAGAGACAGTCCAAGGGGACTGGATCCCAGCAG TGATGTTGGTTGAGGCAGCAAACAGATGGCAGGATGGGCACTGCCGAGAACAGCATTGGTCCCAGAGCCCTGGGCATCAGACCTTAACCA CCAGGCCCACAGCCCAGCGAGGGAGAGGTCGTGAGGCCAGCTCCCGGGGCCCCTGTAACCCTACTCTCCTCTCTCCCTGGACCTCAGAGG TGACACCCATTGGGCCCTTCCGGCATGCCCCCAGTTACTGTAAATGTGGCCCCCAGTGGGCATGGAGCCAGTGCCTGTGGTTGTTTCTCC >In-frame_PLEKHG5_ENST00000377732_chr1_6556553_-_TNFRSF8_ENST00000263932_chr1_12198286_+_2333nt GGACGCTGACCTCTTTTGAAGGGAGGACTGAGGAGATCACCCCACCCCTCCTCCGGTTGGGAGGCCAGTGGGGCCCAGGGGAGCCTGGGT GCCCCGCTGACTGATGCCCTCTGCTCCTCCCCTGCAGACGACCAGAGCCCCGCTGAAAAGAAGGGACTGCGCTGTCAGAACCCCGCCTGC ATGGACAAGGGGCGGGCGGCCAAGCAGCTGAGGAGTGGTGCGTCGGTGACAGAACCCGTCGCGGAAGAGCGAGGGTTAATGAGCCAGCCA CTGATGGAGACCTGCCACAGCGTGGGGGCAGCCTACCTGGAGAGCCTGCCGCTGCAGGATGCCAGCCCGGCCGGGGGCCCCTCGTCCCCC AGGGACCTTCCTGAGCCCCGGGTGTCCACGGAGCACACCAATAACAAGATTGAGAAAATCTACATCATGAAGGCTGACACCGTGATCGTG GGGACCGTGAAGGCTGAGCTGCCGGAGGGCCGGGGCCTGGCGGGGCCAGCAGAGCCCGAGTTGGAGGAGGAGCTGGAGGCGGACCATACC CCCCACTACCCCGAGCAGGAGACAGAACCGCCTCTGGGCAGCTGCAGCGATGTCATGCTCTCAGTGGAAGAGGAAGGGAAAGAAGACCCC TTGCCCACAGCTGCCTCTGGAAAGTGAGGCCTGGGCTGGGCTGGGGCTAGGAGGGCAGCAGGGTGGCCTCTGGGAGGCCAGGATGGCACT GTTGGCACCGAGGTTGGGGGCAGAGGCCCATCTGGCCTGAACTGAGGCTCCAGCATCTAGTGGTGGACCGGCCGGTCACTGCAGGGGTCT GGTGGTCTCTGCTTGCATCCCCAACTTAGCTGTCCCCTGACCCAGAGCCTAGGGGATCCGGGGCTTGTACAGAAGAGACAGTCCAAGGGG ACTGGATCCCAGCAGTGATGTTGGTTGAGGCAGCAAACAGATGGCAGGATGGGCACTGCCGAGAACAGCATTGGTCCCAGAGCCCTGGGC ATCAGACCTTAACCACCAGGCCCACAGCCCAGCGAGGGAGAGGTCGTGAGGCCAGCTCCCGGGGCCCCTGTAACCCTACTCTCCTCTCTC CCTGGACCTCAGAGGTGACACCCATTGGGCCCTTCCGGCATGCCCCCAGTTACTGTAAATGTGGCCCCCAGTGGGCATGGAGCCAGTGCC TGTGGTTGTTTCTCCAGAGTCAAAAGGGAAGTCGAGGGATGGGGCGTCGTCAGCTGGCACTGTCTCTGCTGCAGCGGCCACACTGTACTC TGCACTGGTGTGAGGGCCCCTGCCTGGACTGTGGGACCCTCCTGGTGCTGCCCACCTTCCCTGTCCTGTAGCCCCCTCGGTGGGCCCAGG GCCTAGGGCCCAGGATCAAGTCACTCATCTCAGAATGTCCCCACCAATCCCCGCCACAGCAGGCGCCTCGGGTCCCAGATGTCTGCAGCC CTCAGCAGCTGCAGACCGCCCCTCACCAACCCAGAGAACCTGCTTTACTTTGCCCAGGGACTTCCTCCCCATGTGAACATGGGGAACTTC GGGCCCTGCCTGGAGTCCTTGACCGCTCTCTGTGGGCCCCACCCACTCTGTCCTGGGAAATGAAGAAGCATCTTCCTTAGGTCTGCCCTG CTTGCAAATCCACTAGCACCGACCCCACCACCTGGTTCCGGCTCTGCACGCTTTGGGGTGTGGATGTCGAGAGGCACCACGGCCTCACCC AGGCATCTGCTTTACTCTGGACCATAGGAAACAAGACCGTTTGGAGGTTTCATCAGGATTTTGGGTTTTTCACATTTCACGCTAAGGAGT AGTGGCCCTGACTTCCGGTCGGCTGGCCAGCTGACTCCCTAGGGCCTTCAGACGTGTATGCAAATGAGTGATGGATAAGGATGAGTCTTG GAGTTGCGGGCAGCCTGGAGACTCGTGGACTTACCGCCTGGAGGCAGGCCCGGGAAGGCTGCTGTTTACTCATCGGGCAGCCACGTGCTC TCTGGAGGAAGTGATAGTTTCTGAAACCGCTCAGATGTTTTGGGGAAAGTTGGAGAAGCCGTGGCCTTGCGAGAGGTGGTTACACCAGAA CCTGGACATTGGCCAGAAGAAGCTTAAGTGGGCAGACACTGTTTGCCCAGTGTTTGTGCAAGGATGGAGTGGGTGTCTCTGCATCACCCA CAGCCGCAGCTGTAAGGCACGCTGGAAGGCACACGCCTGCCAGGCAGGGCAGTCTGGCGCCCATGATGGGAGGGATTGACATGTTTCAAC >In-frame_PLEKHG5_ENST00000377732_chr1_6556553_-_TNFRSF8_ENST00000417814_chr1_12198286_+_1240nt GGACGCTGACCTCTTTTGAAGGGAGGACTGAGGAGATCACCCCACCCCTCCTCCGGTTGGGAGGCCAGTGGGGCCCAGGGGAGCCTGGGT GCCCCGCTGACTGATGCCCTCTGCTCCTCCCCTGCAGACGACCAGAGCCCCGCTGAAAAGAAGGGACTGCGCTGTCAGAACCCCGCCTGC ATGGACAAGGGGCGGGCGGCCAAGCTGAGGAGTGGTGCGTCGGTGACAGAACCCGTCGCGGAAGAGCGAGGGTTAATGAGCCAGCCACTG ATGGAGACCTGCCACAGCGTGGGGGCAGCCTACCTGGAGAGCCTGCCGCTGCAGGATGCCAGCCCGGCCGGGGGCCCCTCGTCCCCCAGG GACCTTCCTGAGCCCCGGGTGTCCACGGAGCACACCAATAACAAGATTGAGAAAATCTACATCATGAAGGCTGACACCGTGATCGTGGGG ACCGTGAAGGCTGAGCTGCCGGAGGGCCGGGGCCTGGCGGGGCCAGCAGAGCCCGAGTTGGAGGAGGAGCTGGAGGCGGACCATACCCCC CACTACCCCGAGCAGGAGACAGAACCGCCTCTGGGCAGCTGCAGCGATGTCATGCTCTCAGTGGAAGAGGAAGGGAAAGAAGACCCCTTG CCCACAGCTGCCTCTGGAAAGTGAGGCCTGGGCTGGGCTGGGGCTAGGAGGGCAGCAGGGTGGCCTCTGGGAGGCCAGGATGGCACTGTT GGCACCGAGGTTGGGGGCAGAGGCCCATCTGGCCTGAACTGAGGCTCCAGCATCTAGTGGTGGACCGGCCGGTCACTGCAGGGGTCTGGT GGTCTCTGCTTGCATCCCCAACTTAGCTGTCCCCTGACCCAGAGCCTAGGGGATCCGGGGCTTGTACAGAAGAGACAGTCCAAGGGGACT GGATCCCAGCAGTGATGTTGGTTGAGGCAGCAAACAGATGGCAGGATGGGCACTGCCGAGAACAGCATTGGTCCCAGAGCCCTGGGCATC AGACCTTAACCACCAGGCCCACAGCCCAGCGAGGGAGAGGTCGTGAGGCCAGCTCCCGGGGCCCCTGTAACCCTACTCTCCTCTCTCCCT GGACCTCAGAGGTGACACCCATTGGGCCCTTCCGGCATGCCCCCAGTTACTGTAAATGTGGCCCCCAGTGGGCATGGAGCCAGTGCCTGT >In-frame_PLEKHG5_ENST00000400915_chr1_6556553_-_TNFRSF8_ENST00000263932_chr1_12198286_+_2277nt CCCAGTCCCCGGCGTCCCCGGCGCCCCCGCCCGCCGCCCGCCCCCCGCGCGGCACGGGGCCTGCTCCATGGACGACCAGAGCCCCGCTGA AAAGAAGGGACTGCGCTGTCAGAACCCCGCCTGCATGGACAAGGGGCGGGCGGCCAAGCAGCTGAGGAGTGGTGCGTCGGTGACAGAACC CGTCGCGGAAGAGCGAGGGTTAATGAGCCAGCCACTGATGGAGACCTGCCACAGCGTGGGGGCAGCCTACCTGGAGAGCCTGCCGCTGCA GGATGCCAGCCCGGCCGGGGGCCCCTCGTCCCCCAGGGACCTTCCTGAGCCCCGGGTGTCCACGGAGCACACCAATAACAAGATTGAGAA AATCTACATCATGAAGGCTGACACCGTGATCGTGGGGACCGTGAAGGCTGAGCTGCCGGAGGGCCGGGGCCTGGCGGGGCCAGCAGAGCC CGAGTTGGAGGAGGAGCTGGAGGCGGACCATACCCCCCACTACCCCGAGCAGGAGACAGAACCGCCTCTGGGCAGCTGCAGCGATGTCAT GCTCTCAGTGGAAGAGGAAGGGAAAGAAGACCCCTTGCCCACAGCTGCCTCTGGAAAGTGAGGCCTGGGCTGGGCTGGGGCTAGGAGGGC AGCAGGGTGGCCTCTGGGAGGCCAGGATGGCACTGTTGGCACCGAGGTTGGGGGCAGAGGCCCATCTGGCCTGAACTGAGGCTCCAGCAT CTAGTGGTGGACCGGCCGGTCACTGCAGGGGTCTGGTGGTCTCTGCTTGCATCCCCAACTTAGCTGTCCCCTGACCCAGAGCCTAGGGGA TCCGGGGCTTGTACAGAAGAGACAGTCCAAGGGGACTGGATCCCAGCAGTGATGTTGGTTGAGGCAGCAAACAGATGGCAGGATGGGCAC TGCCGAGAACAGCATTGGTCCCAGAGCCCTGGGCATCAGACCTTAACCACCAGGCCCACAGCCCAGCGAGGGAGAGGTCGTGAGGCCAGC TCCCGGGGCCCCTGTAACCCTACTCTCCTCTCTCCCTGGACCTCAGAGGTGACACCCATTGGGCCCTTCCGGCATGCCCCCAGTTACTGT AAATGTGGCCCCCAGTGGGCATGGAGCCAGTGCCTGTGGTTGTTTCTCCAGAGTCAAAAGGGAAGTCGAGGGATGGGGCGTCGTCAGCTG GCACTGTCTCTGCTGCAGCGGCCACACTGTACTCTGCACTGGTGTGAGGGCCCCTGCCTGGACTGTGGGACCCTCCTGGTGCTGCCCACC TTCCCTGTCCTGTAGCCCCCTCGGTGGGCCCAGGGCCTAGGGCCCAGGATCAAGTCACTCATCTCAGAATGTCCCCACCAATCCCCGCCA CAGCAGGCGCCTCGGGTCCCAGATGTCTGCAGCCCTCAGCAGCTGCAGACCGCCCCTCACCAACCCAGAGAACCTGCTTTACTTTGCCCA GGGACTTCCTCCCCATGTGAACATGGGGAACTTCGGGCCCTGCCTGGAGTCCTTGACCGCTCTCTGTGGGCCCCACCCACTCTGTCCTGG GAAATGAAGAAGCATCTTCCTTAGGTCTGCCCTGCTTGCAAATCCACTAGCACCGACCCCACCACCTGGTTCCGGCTCTGCACGCTTTGG GGTGTGGATGTCGAGAGGCACCACGGCCTCACCCAGGCATCTGCTTTACTCTGGACCATAGGAAACAAGACCGTTTGGAGGTTTCATCAG GATTTTGGGTTTTTCACATTTCACGCTAAGGAGTAGTGGCCCTGACTTCCGGTCGGCTGGCCAGCTGACTCCCTAGGGCCTTCAGACGTG TATGCAAATGAGTGATGGATAAGGATGAGTCTTGGAGTTGCGGGCAGCCTGGAGACTCGTGGACTTACCGCCTGGAGGCAGGCCCGGGAA GGCTGCTGTTTACTCATCGGGCAGCCACGTGCTCTCTGGAGGAAGTGATAGTTTCTGAAACCGCTCAGATGTTTTGGGGAAAGTTGGAGA AGCCGTGGCCTTGCGAGAGGTGGTTACACCAGAACCTGGACATTGGCCAGAAGAAGCTTAAGTGGGCAGACACTGTTTGCCCAGTGTTTG TGCAAGGATGGAGTGGGTGTCTCTGCATCACCCACAGCCGCAGCTGTAAGGCACGCTGGAAGGCACACGCCTGCCAGGCAGGGCAGTCTG GCGCCCATGATGGGAGGGATTGACATGTTTCAACAAAATAATGCACTTCCTTACCTAGTGGCCCTTCACACAACTTTTGAATCTCTAAAA >In-frame_PLEKHG5_ENST00000400915_chr1_6556553_-_TNFRSF8_ENST00000417814_chr1_12198286_+_1184nt CCCAGTCCCCGGCGTCCCCGGCGCCCCCGCCCGCCGCCCGCCCCCCGCGCGGCACGGGGCCTGCTCCATGGACGACCAGAGCCCCGCTGA AAAGAAGGGACTGCGCTGTCAGAACCCCGCCTGCATGGACAAGGGGCGGGCGGCCAAGCTGAGGAGTGGTGCGTCGGTGACAGAACCCGT CGCGGAAGAGCGAGGGTTAATGAGCCAGCCACTGATGGAGACCTGCCACAGCGTGGGGGCAGCCTACCTGGAGAGCCTGCCGCTGCAGGA TGCCAGCCCGGCCGGGGGCCCCTCGTCCCCCAGGGACCTTCCTGAGCCCCGGGTGTCCACGGAGCACACCAATAACAAGATTGAGAAAAT CTACATCATGAAGGCTGACACCGTGATCGTGGGGACCGTGAAGGCTGAGCTGCCGGAGGGCCGGGGCCTGGCGGGGCCAGCAGAGCCCGA GTTGGAGGAGGAGCTGGAGGCGGACCATACCCCCCACTACCCCGAGCAGGAGACAGAACCGCCTCTGGGCAGCTGCAGCGATGTCATGCT CTCAGTGGAAGAGGAAGGGAAAGAAGACCCCTTGCCCACAGCTGCCTCTGGAAAGTGAGGCCTGGGCTGGGCTGGGGCTAGGAGGGCAGC AGGGTGGCCTCTGGGAGGCCAGGATGGCACTGTTGGCACCGAGGTTGGGGGCAGAGGCCCATCTGGCCTGAACTGAGGCTCCAGCATCTA GTGGTGGACCGGCCGGTCACTGCAGGGGTCTGGTGGTCTCTGCTTGCATCCCCAACTTAGCTGTCCCCTGACCCAGAGCCTAGGGGATCC GGGGCTTGTACAGAAGAGACAGTCCAAGGGGACTGGATCCCAGCAGTGATGTTGGTTGAGGCAGCAAACAGATGGCAGGATGGGCACTGC CGAGAACAGCATTGGTCCCAGAGCCCTGGGCATCAGACCTTAACCACCAGGCCCACAGCCCAGCGAGGGAGAGGTCGTGAGGCCAGCTCC CGGGGCCCCTGTAACCCTACTCTCCTCTCTCCCTGGACCTCAGAGGTGACACCCATTGGGCCCTTCCGGCATGCCCCCAGTTACTGTAAA TGTGGCCCCCAGTGGGCATGGAGCCAGTGCCTGTGGTTGTTTCTCCAGAGTCAAAAGGGAAGTCGAGGGATGGGGCGTCGTCAGCTGGCA >In-frame_PLEKHG5_ENST00000377740_chr1_6556553_-_TNFRSF8_ENST00000263932_chr1_12198286_+_2823nt CTTGATCTCCCGCTGTGACCAGCCCCTCTCTGCCTGGCAGGGGAAAGCCACCAAACTAAGGCCTTCCTGGTAGCCAAGGAGCCCAGCAGA GGGGCTGCTGCTGGCTGCTGGGATTGCAGAGGCCGGGGTCTCTGTGGTGTTGCTTTCCTGGAAAGGAGGGACGGCACCTCCAGGGCAGCC AGCAGTGTGGGAGCCCATTCCAGGGCGCAAATGGGCACTCAGGAATGGAAAATCCAAGAAGGAACCAACCACCAACAAGGAAATGCAGTG TGAGCGGCGGCTGCGAAGTCTGTGCCTTCAAATATACAGCGCCCAGGGGACCTGTGTTGGACGGGGAGCAAATTGGCAGGGCTGAGAGCG CCTTGGTTTTCTGTGCAGACAGGTCCAGCTGCAGAAATTAAGACTGGGGCTGAGTCGGGGAGAAGCCTTCCATGTTGAGATGGCAACTGG GCAAAGCAGGACGGAGACCTGTGTGTCTGATTAGAGAGGCCTGTGGCATTGGCATGTGGCTGGAGGTCCAGGCAGGGTGCCACCACCGCA GAGGTCAAGCATGAATTCAGTCCTGACAAAACATGGGTCTCCACCTCGAAGCTGGCTCAGCCTTTGTTCAGGAACCGACGACCAGAGCCC CGCTGAAAAGAAGGGACTGCGCTGTCAGAACCCCGCCTGCATGGACAAGGGGCGGGCGGCCAAGCAGCTGAGGAGTGGTGCGTCGGTGAC AGAACCCGTCGCGGAAGAGCGAGGGTTAATGAGCCAGCCACTGATGGAGACCTGCCACAGCGTGGGGGCAGCCTACCTGGAGAGCCTGCC GCTGCAGGATGCCAGCCCGGCCGGGGGCCCCTCGTCCCCCAGGGACCTTCCTGAGCCCCGGGTGTCCACGGAGCACACCAATAACAAGAT TGAGAAAATCTACATCATGAAGGCTGACACCGTGATCGTGGGGACCGTGAAGGCTGAGCTGCCGGAGGGCCGGGGCCTGGCGGGGCCAGC AGAGCCCGAGTTGGAGGAGGAGCTGGAGGCGGACCATACCCCCCACTACCCCGAGCAGGAGACAGAACCGCCTCTGGGCAGCTGCAGCGA TGTCATGCTCTCAGTGGAAGAGGAAGGGAAAGAAGACCCCTTGCCCACAGCTGCCTCTGGAAAGTGAGGCCTGGGCTGGGCTGGGGCTAG GAGGGCAGCAGGGTGGCCTCTGGGAGGCCAGGATGGCACTGTTGGCACCGAGGTTGGGGGCAGAGGCCCATCTGGCCTGAACTGAGGCTC CAGCATCTAGTGGTGGACCGGCCGGTCACTGCAGGGGTCTGGTGGTCTCTGCTTGCATCCCCAACTTAGCTGTCCCCTGACCCAGAGCCT AGGGGATCCGGGGCTTGTACAGAAGAGACAGTCCAAGGGGACTGGATCCCAGCAGTGATGTTGGTTGAGGCAGCAAACAGATGGCAGGAT GGGCACTGCCGAGAACAGCATTGGTCCCAGAGCCCTGGGCATCAGACCTTAACCACCAGGCCCACAGCCCAGCGAGGGAGAGGTCGTGAG GCCAGCTCCCGGGGCCCCTGTAACCCTACTCTCCTCTCTCCCTGGACCTCAGAGGTGACACCCATTGGGCCCTTCCGGCATGCCCCCAGT TACTGTAAATGTGGCCCCCAGTGGGCATGGAGCCAGTGCCTGTGGTTGTTTCTCCAGAGTCAAAAGGGAAGTCGAGGGATGGGGCGTCGT CAGCTGGCACTGTCTCTGCTGCAGCGGCCACACTGTACTCTGCACTGGTGTGAGGGCCCCTGCCTGGACTGTGGGACCCTCCTGGTGCTG CCCACCTTCCCTGTCCTGTAGCCCCCTCGGTGGGCCCAGGGCCTAGGGCCCAGGATCAAGTCACTCATCTCAGAATGTCCCCACCAATCC CCGCCACAGCAGGCGCCTCGGGTCCCAGATGTCTGCAGCCCTCAGCAGCTGCAGACCGCCCCTCACCAACCCAGAGAACCTGCTTTACTT TGCCCAGGGACTTCCTCCCCATGTGAACATGGGGAACTTCGGGCCCTGCCTGGAGTCCTTGACCGCTCTCTGTGGGCCCCACCCACTCTG TCCTGGGAAATGAAGAAGCATCTTCCTTAGGTCTGCCCTGCTTGCAAATCCACTAGCACCGACCCCACCACCTGGTTCCGGCTCTGCACG CTTTGGGGTGTGGATGTCGAGAGGCACCACGGCCTCACCCAGGCATCTGCTTTACTCTGGACCATAGGAAACAAGACCGTTTGGAGGTTT CATCAGGATTTTGGGTTTTTCACATTTCACGCTAAGGAGTAGTGGCCCTGACTTCCGGTCGGCTGGCCAGCTGACTCCCTAGGGCCTTCA GACGTGTATGCAAATGAGTGATGGATAAGGATGAGTCTTGGAGTTGCGGGCAGCCTGGAGACTCGTGGACTTACCGCCTGGAGGCAGGCC CGGGAAGGCTGCTGTTTACTCATCGGGCAGCCACGTGCTCTCTGGAGGAAGTGATAGTTTCTGAAACCGCTCAGATGTTTTGGGGAAAGT TGGAGAAGCCGTGGCCTTGCGAGAGGTGGTTACACCAGAACCTGGACATTGGCCAGAAGAAGCTTAAGTGGGCAGACACTGTTTGCCCAG TGTTTGTGCAAGGATGGAGTGGGTGTCTCTGCATCACCCACAGCCGCAGCTGTAAGGCACGCTGGAAGGCACACGCCTGCCAGGCAGGGC AGTCTGGCGCCCATGATGGGAGGGATTGACATGTTTCAACAAAATAATGCACTTCCTTACCTAGTGGCCCTTCACACAACTTTTGAATCT >In-frame_PLEKHG5_ENST00000377740_chr1_6556553_-_TNFRSF8_ENST00000417814_chr1_12198286_+_1730nt CTTGATCTCCCGCTGTGACCAGCCCCTCTCTGCCTGGCAGGGGAAAGCCACCAAACTAAGGCCTTCCTGGTAGCCAAGGAGCCCAGCAGA GGGGCTGCTGCTGGCTGCTGGGATTGCAGAGGCCGGGGTCTCTGTGGTGTTGCTTTCCTGGAAAGGAGGGACGGCACCTCCAGGGCAGCC AGCAGTGTGGGAGCCCATTCCAGGGCGCAAATGGGCACTCAGGAATGGAAAATCCAAGAAGGAACCAACCACCAACAAGGAAATGCAGTG TGAGCGGCGGCTGCGAAGTCTGTGCCTTCAAATATACAGCGCCCAGGGGACCTGTGTTGGACGGGGAGCAAATTGGCAGGGCTGAGAGCG CCTTGGTTTTCTGTGCAGACAGGTCCAGCTGCAGAAATTAAGACTGGGGCTGAGTCGGGGAGAAGCCTTCCATGTTGAGATGGCAACTGG GCAAAGCAGGACGGAGACCTGTGTGTCTGATTAGAGAGGCCTGTGGCATTGGCATGTGGCTGGAGGTCCAGGCAGGGTGCCACCACCGCA GAGGTCAAGCATGAATTCAGTCCTGACAAAACATGGGTCTCCACCTCGAAGCTGGCTCAGCCTTTGTTCAGGAACCGACGACCAGAGCCC CGCTGAAAAGAAGGGACTGCGCTGTCAGAACCCCGCCTGCATGGACAAGGGGCGGGCGGCCAAGCTGAGGAGTGGTGCGTCGGTGACAGA ACCCGTCGCGGAAGAGCGAGGGTTAATGAGCCAGCCACTGATGGAGACCTGCCACAGCGTGGGGGCAGCCTACCTGGAGAGCCTGCCGCT GCAGGATGCCAGCCCGGCCGGGGGCCCCTCGTCCCCCAGGGACCTTCCTGAGCCCCGGGTGTCCACGGAGCACACCAATAACAAGATTGA GAAAATCTACATCATGAAGGCTGACACCGTGATCGTGGGGACCGTGAAGGCTGAGCTGCCGGAGGGCCGGGGCCTGGCGGGGCCAGCAGA GCCCGAGTTGGAGGAGGAGCTGGAGGCGGACCATACCCCCCACTACCCCGAGCAGGAGACAGAACCGCCTCTGGGCAGCTGCAGCGATGT CATGCTCTCAGTGGAAGAGGAAGGGAAAGAAGACCCCTTGCCCACAGCTGCCTCTGGAAAGTGAGGCCTGGGCTGGGCTGGGGCTAGGAG GGCAGCAGGGTGGCCTCTGGGAGGCCAGGATGGCACTGTTGGCACCGAGGTTGGGGGCAGAGGCCCATCTGGCCTGAACTGAGGCTCCAG CATCTAGTGGTGGACCGGCCGGTCACTGCAGGGGTCTGGTGGTCTCTGCTTGCATCCCCAACTTAGCTGTCCCCTGACCCAGAGCCTAGG GGATCCGGGGCTTGTACAGAAGAGACAGTCCAAGGGGACTGGATCCCAGCAGTGATGTTGGTTGAGGCAGCAAACAGATGGCAGGATGGG CACTGCCGAGAACAGCATTGGTCCCAGAGCCCTGGGCATCAGACCTTAACCACCAGGCCCACAGCCCAGCGAGGGAGAGGTCGTGAGGCC AGCTCCCGGGGCCCCTGTAACCCTACTCTCCTCTCTCCCTGGACCTCAGAGGTGACACCCATTGGGCCCTTCCGGCATGCCCCCAGTTAC TGTAAATGTGGCCCCCAGTGGGCATGGAGCCAGTGCCTGTGGTTGTTTCTCCAGAGTCAAAAGGGAAGTCGAGGGATGGGGCGTCGTCAG >In-frame_PLEKHG5_ENST00000537245_chr1_6556553_-_TNFRSF8_ENST00000263932_chr1_12198286_+_2344nt ACCGCGGTGCACTCCAGCCCCCAGGAAGAGAGGCAGCTTGGAGGGGGCCAAATTCAGGGTCAAAGATGAGTCTTGGGGAACGGGGGTCGC CCCAGACCTTCGGGGGCTCCTCTGTCTCTAAAGGGAGCGATGCAGGGCACGACCAGAGCCCCGCTGAAAAGAAGGGACTGCGCTGTCAGA ACCCCGCCTGCATGGACAAGGGGCGGGCGGCCAAGCAGCTGAGGAGTGGTGCGTCGGTGACAGAACCCGTCGCGGAAGAGCGAGGGTTAA TGAGCCAGCCACTGATGGAGACCTGCCACAGCGTGGGGGCAGCCTACCTGGAGAGCCTGCCGCTGCAGGATGCCAGCCCGGCCGGGGGCC CCTCGTCCCCCAGGGACCTTCCTGAGCCCCGGGTGTCCACGGAGCACACCAATAACAAGATTGAGAAAATCTACATCATGAAGGCTGACA CCGTGATCGTGGGGACCGTGAAGGCTGAGCTGCCGGAGGGCCGGGGCCTGGCGGGGCCAGCAGAGCCCGAGTTGGAGGAGGAGCTGGAGG CGGACCATACCCCCCACTACCCCGAGCAGGAGACAGAACCGCCTCTGGGCAGCTGCAGCGATGTCATGCTCTCAGTGGAAGAGGAAGGGA AAGAAGACCCCTTGCCCACAGCTGCCTCTGGAAAGTGAGGCCTGGGCTGGGCTGGGGCTAGGAGGGCAGCAGGGTGGCCTCTGGGAGGCC AGGATGGCACTGTTGGCACCGAGGTTGGGGGCAGAGGCCCATCTGGCCTGAACTGAGGCTCCAGCATCTAGTGGTGGACCGGCCGGTCAC TGCAGGGGTCTGGTGGTCTCTGCTTGCATCCCCAACTTAGCTGTCCCCTGACCCAGAGCCTAGGGGATCCGGGGCTTGTACAGAAGAGAC AGTCCAAGGGGACTGGATCCCAGCAGTGATGTTGGTTGAGGCAGCAAACAGATGGCAGGATGGGCACTGCCGAGAACAGCATTGGTCCCA GAGCCCTGGGCATCAGACCTTAACCACCAGGCCCACAGCCCAGCGAGGGAGAGGTCGTGAGGCCAGCTCCCGGGGCCCCTGTAACCCTAC TCTCCTCTCTCCCTGGACCTCAGAGGTGACACCCATTGGGCCCTTCCGGCATGCCCCCAGTTACTGTAAATGTGGCCCCCAGTGGGCATG GAGCCAGTGCCTGTGGTTGTTTCTCCAGAGTCAAAAGGGAAGTCGAGGGATGGGGCGTCGTCAGCTGGCACTGTCTCTGCTGCAGCGGCC ACACTGTACTCTGCACTGGTGTGAGGGCCCCTGCCTGGACTGTGGGACCCTCCTGGTGCTGCCCACCTTCCCTGTCCTGTAGCCCCCTCG GTGGGCCCAGGGCCTAGGGCCCAGGATCAAGTCACTCATCTCAGAATGTCCCCACCAATCCCCGCCACAGCAGGCGCCTCGGGTCCCAGA TGTCTGCAGCCCTCAGCAGCTGCAGACCGCCCCTCACCAACCCAGAGAACCTGCTTTACTTTGCCCAGGGACTTCCTCCCCATGTGAACA TGGGGAACTTCGGGCCCTGCCTGGAGTCCTTGACCGCTCTCTGTGGGCCCCACCCACTCTGTCCTGGGAAATGAAGAAGCATCTTCCTTA GGTCTGCCCTGCTTGCAAATCCACTAGCACCGACCCCACCACCTGGTTCCGGCTCTGCACGCTTTGGGGTGTGGATGTCGAGAGGCACCA CGGCCTCACCCAGGCATCTGCTTTACTCTGGACCATAGGAAACAAGACCGTTTGGAGGTTTCATCAGGATTTTGGGTTTTTCACATTTCA CGCTAAGGAGTAGTGGCCCTGACTTCCGGTCGGCTGGCCAGCTGACTCCCTAGGGCCTTCAGACGTGTATGCAAATGAGTGATGGATAAG GATGAGTCTTGGAGTTGCGGGCAGCCTGGAGACTCGTGGACTTACCGCCTGGAGGCAGGCCCGGGAAGGCTGCTGTTTACTCATCGGGCA GCCACGTGCTCTCTGGAGGAAGTGATAGTTTCTGAAACCGCTCAGATGTTTTGGGGAAAGTTGGAGAAGCCGTGGCCTTGCGAGAGGTGG TTACACCAGAACCTGGACATTGGCCAGAAGAAGCTTAAGTGGGCAGACACTGTTTGCCCAGTGTTTGTGCAAGGATGGAGTGGGTGTCTC TGCATCACCCACAGCCGCAGCTGTAAGGCACGCTGGAAGGCACACGCCTGCCAGGCAGGGCAGTCTGGCGCCCATGATGGGAGGGATTGA CATGTTTCAACAAAATAATGCACTTCCTTACCTAGTGGCCCTTCACACAACTTTTGAATCTCTAAAAATCCATAAAATCCTTAAAGAACT >In-frame_PLEKHG5_ENST00000537245_chr1_6556553_-_TNFRSF8_ENST00000417814_chr1_12198286_+_1251nt ACCGCGGTGCACTCCAGCCCCCAGGAAGAGAGGCAGCTTGGAGGGGGCCAAATTCAGGGTCAAAGATGAGTCTTGGGGAACGGGGGTCGC CCCAGACCTTCGGGGGCTCCTCTGTCTCTAAAGGGAGCGATGCAGGGCACGACCAGAGCCCCGCTGAAAAGAAGGGACTGCGCTGTCAGA ACCCCGCCTGCATGGACAAGGGGCGGGCGGCCAAGCTGAGGAGTGGTGCGTCGGTGACAGAACCCGTCGCGGAAGAGCGAGGGTTAATGA GCCAGCCACTGATGGAGACCTGCCACAGCGTGGGGGCAGCCTACCTGGAGAGCCTGCCGCTGCAGGATGCCAGCCCGGCCGGGGGCCCCT CGTCCCCCAGGGACCTTCCTGAGCCCCGGGTGTCCACGGAGCACACCAATAACAAGATTGAGAAAATCTACATCATGAAGGCTGACACCG TGATCGTGGGGACCGTGAAGGCTGAGCTGCCGGAGGGCCGGGGCCTGGCGGGGCCAGCAGAGCCCGAGTTGGAGGAGGAGCTGGAGGCGG ACCATACCCCCCACTACCCCGAGCAGGAGACAGAACCGCCTCTGGGCAGCTGCAGCGATGTCATGCTCTCAGTGGAAGAGGAAGGGAAAG AAGACCCCTTGCCCACAGCTGCCTCTGGAAAGTGAGGCCTGGGCTGGGCTGGGGCTAGGAGGGCAGCAGGGTGGCCTCTGGGAGGCCAGG ATGGCACTGTTGGCACCGAGGTTGGGGGCAGAGGCCCATCTGGCCTGAACTGAGGCTCCAGCATCTAGTGGTGGACCGGCCGGTCACTGC AGGGGTCTGGTGGTCTCTGCTTGCATCCCCAACTTAGCTGTCCCCTGACCCAGAGCCTAGGGGATCCGGGGCTTGTACAGAAGAGACAGT CCAAGGGGACTGGATCCCAGCAGTGATGTTGGTTGAGGCAGCAAACAGATGGCAGGATGGGCACTGCCGAGAACAGCATTGGTCCCAGAG CCCTGGGCATCAGACCTTAACCACCAGGCCCACAGCCCAGCGAGGGAGAGGTCGTGAGGCCAGCTCCCGGGGCCCCTGTAACCCTACTCT CCTCTCTCCCTGGACCTCAGAGGTGACACCCATTGGGCCCTTCCGGCATGCCCCCAGTTACTGTAAATGTGGCCCCCAGTGGGCATGGAG |
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FusionGenePPI for PLEKHG5_TNFRSF8 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
PLEKHG5 | LNX1, LNX2, RND1, RND2, RND3, BTRC, FBXW11, YWHAE, YWHAZ, YWHAG, PDP1, GNB4, YWHAH, YWHAQ, USP7 | TNFRSF8 | TNFSF8, TDP2, TRAF5, TRAF2, TRAIP, BCL6, TRAF1, TRAF3, TNFRSF8, NAA25, CCDC112, NAA20, CEP57, DPY19L1, DAPK3, SPATS2, BLOC1S1, EXOC1, ATP6V1D, GOLPH3L, RACGAP1, FHL2, KIF3A, NDC1, CDC6, GOLPH3 |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for PLEKHG5_TNFRSF8 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Tgene | TNFRSF8 | P28908 | DB08870 | Brentuximab vedotin | Tumor necrosis factor receptor superfamily member 8 {ECO:0000312|HGNC:HGNC:11923} | biotech | approved|investigational |
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RelatedDiseases for PLEKHG5_TNFRSF8 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | PLEKHG5 | C0032460 | Polycystic Ovary Syndrome | 1 | CTD_human |
Hgene | PLEKHG5 | C1970211 | Spinal Muscular Atrophy, Distal, Autosomal Recessive, 4 | 1 | CTD_human;ORPHANET;UNIPROT |
Hgene | PLEKHG5 | C3809309 | CHARCOT-MARIE-TOOTH DISEASE, RECESSIVE INTERMEDIATE C | 1 | ORPHANET;UNIPROT |
Tgene | TNFRSF8 | C0019829 | Hodgkin Disease | 2 | CTD_human |
Tgene | TNFRSF8 | C0345967 | Malignant mesothelioma | 1 | CTD_human |