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Fusion gene ID: 27242 |
FusionGeneSummary for PIM3_PIM3 |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: PIM3_PIM3 | Fusion gene ID: 27242 | Hgene | Tgene | Gene symbol | PIM3 | PIM3 | Gene ID | 415116 | 415116 |
| Gene name | Pim-3 proto-oncogene, serine/threonine kinase | Pim-3 proto-oncogene, serine/threonine kinase | |
| Synonyms | pim-3 | pim-3 | |
| Cytomap | 22q13.33 | 22q13.33 | |
| Type of gene | protein-coding | protein-coding | |
| Description | serine/threonine-protein kinase pim-3pim-3 oncogeneserine/threonine kinase Pim-3 | serine/threonine-protein kinase pim-3pim-3 oncogeneserine/threonine kinase Pim-3 | |
| Modification date | 20180523 | 20180523 | |
| UniProtAcc | Q86V86 | Q86V86 | |
| Ensembl transtripts involved in fusion gene | ENST00000360612, | ENST00000360612, | |
| Fusion gene scores | * DoF score | 4 X 4 X 2=32 | 1 X 1 X 1=1 |
| # samples | 4 | 1 | |
| ** MAII score | log2(4/32*10)=0.321928094887362 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | log2(1/1*10)=3.32192809488736 | |
| Context | PubMed: PIM3 [Title/Abstract] AND PIM3 [Title/Abstract] AND fusion [Title/Abstract] | ||
| Functional or gene categories assigned by FusionGDB annotation | |||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Hgene | PIM3 | GO:0006468 | protein phosphorylation | 18593906 |
| Tgene | PIM3 | GO:0006468 | protein phosphorylation | 18593906 |
| Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| ChiTaRS3.1 | BU180116 | PIM3 | chr22 | 50357199 | + | PIM3 | chr22 | 50354843 | + |
| * LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
| Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| 3UTR-3CDS | ENST00000360612 | ENST00000360612 | PIM3 | chr22 | 50357199 | + | PIM3 | chr22 | 50354843 | + |
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FusionProtFeatures for PIM3_PIM3 |
| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| PIM3 | PIM3 |
| Proto-oncogene with serine/threonine kinase activitythat can prevent apoptosis, promote cell survival and proteintranslation. May contribute to tumorigenesis through: the deliveryof survival signaling through phosphorylation of BAD which inducesrelease of the anti-apoptotic protein Bcl-X(L), the regulation ofcell cycle progression, protein synthesis and by regulation of MYCtranscriptional activity. Additionally to this role ontumorigenesis, can also negatively regulate insulin secretion byinhibiting the activation of MAPK1/3 (ERK1/2), through SOCS6.Involved also in the control of energy metabolism and regulationof AMPK activity in modulating MYC and PPARGC1A protein levels andcell growth. {ECO:0000269|PubMed:15540201,ECO:0000269|PubMed:16818649, ECO:0000269|PubMed:17270021,ECO:0000269|PubMed:17876606, ECO:0000269|PubMed:18593906}. | Proto-oncogene with serine/threonine kinase activitythat can prevent apoptosis, promote cell survival and proteintranslation. May contribute to tumorigenesis through: the deliveryof survival signaling through phosphorylation of BAD which inducesrelease of the anti-apoptotic protein Bcl-X(L), the regulation ofcell cycle progression, protein synthesis and by regulation of MYCtranscriptional activity. Additionally to this role ontumorigenesis, can also negatively regulate insulin secretion byinhibiting the activation of MAPK1/3 (ERK1/2), through SOCS6.Involved also in the control of energy metabolism and regulationof AMPK activity in modulating MYC and PPARGC1A protein levels andcell growth. {ECO:0000269|PubMed:15540201,ECO:0000269|PubMed:16818649, ECO:0000269|PubMed:17270021,ECO:0000269|PubMed:17876606, ECO:0000269|PubMed:18593906}. |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
| - In-frame and retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| - In-frame and not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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FusionGeneSequence for PIM3_PIM3 |
| For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
| * Fusion amino acid sequences. |
| * Fusion transcript sequences (only coding sequence (CDS) region). |
| * Fusion transcript sequences (Full-length transcript). |
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FusionGenePPI for PIM3_PIM3 |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
| Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
| Hgene | Hgene's interactors | Tgene | Tgene's interactors |
| - Retained PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| - Lost PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
| - Retained PPIs, but lost function due to frame-shift fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for PIM3_PIM3 |
| Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
| Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for PIM3_PIM3 |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
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