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FusionGeneSummary

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Fusion gene ID: 26852

FusionGeneSummary for PHACTR1_BCL11A

check button Fusion gene summary
Fusion gene informationFusion gene name: PHACTR1_BCL11A
Fusion gene ID: 26852
HgeneTgene
Gene symbol

PHACTR1

BCL11A

Gene ID

221692

53335

Gene namephosphatase and actin regulator 1B cell CLL/lymphoma 11A
SynonymsRPEL|RPEL1|dJ257A7.2BCL11A-L|BCL11A-S|BCL11A-XL|BCL11a-M|CTIP1|DILOS|EVI9|HBFQTL5|ZNF856
Cytomap

6p24.1

2p16.1

Type of geneprotein-codingprotein-coding
Descriptionphosphatase and actin regulator 1RPEL repeat containing 1B-cell lymphoma/leukemia 11AB-cell CLL/lymphoma 11A (zinc finger protein) isoform 2BCL11A B-cell CLL/lymphoma 11A (zinc finger protein) isoform 1C2H2-type zinc finger proteinCOUP-TF-interacting protein 1ecotropic viral integration site 9 homologecot
Modification date2018051920180527
UniProtAcc

Q9C0D0

Q9H165

Ensembl transtripts involved in fusion geneENST00000379350, ENST00000379348, 
ENST00000332995, ENST00000482982, 
ENST00000379345, ENST00000457702, 
ENST00000379335, ENST00000379329, 
ENST00000356842, ENST00000359629, 
ENST00000538214, ENST00000537768, 
ENST00000335712, ENST00000477659, 
ENST00000358510, 
Fusion gene scores* DoF score2 X 3 X 2=129 X 8 X 3=216
# samples 38
** MAII scorelog2(3/12*10)=1.32192809488736
effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs).
DoF>8 and MAII>0
log2(8/216*10)=-1.43295940727611
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: PHACTR1 [Title/Abstract] AND BCL11A [Title/Abstract] AND fusion [Title/Abstract]

Functional or gene categories assigned by FusionGDB annotationOncogene involved fusion gene, in-frame and retained their domain.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
TgeneBCL11A

GO:0000122

negative regulation of transcription by RNA polymerase II

19153051


check button Fusion gene information from three resources
(ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018))
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
Data typeSourceCancer typeSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
TCGARVLUADTCGA-44-7670-01APHACTR1chr6

12750022

+BCL11Achr2

60679801

-
* LD: Li Ding group's fusion gene list
  RV: Roel Verhaak group's fusion gene list
  ChiTaRs fusion database

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
In-frameENST00000379350ENST00000356842PHACTR1chr6

12750022

+BCL11Achr2

60679801

-
In-frameENST00000379350ENST00000359629PHACTR1chr6

12750022

+BCL11Achr2

60679801

-
In-frameENST00000379350ENST00000538214PHACTR1chr6

12750022

+BCL11Achr2

60679801

-
Frame-shiftENST00000379350ENST00000537768PHACTR1chr6

12750022

+BCL11Achr2

60679801

-
5CDS-intronENST00000379350ENST00000335712PHACTR1chr6

12750022

+BCL11Achr2

60679801

-
5CDS-intronENST00000379350ENST00000477659PHACTR1chr6

12750022

+BCL11Achr2

60679801

-
5CDS-intronENST00000379350ENST00000358510PHACTR1chr6

12750022

+BCL11Achr2

60679801

-
In-frameENST00000379348ENST00000356842PHACTR1chr6

12750022

+BCL11Achr2

60679801

-
In-frameENST00000379348ENST00000359629PHACTR1chr6

12750022

+BCL11Achr2

60679801

-
In-frameENST00000379348ENST00000538214PHACTR1chr6

12750022

+BCL11Achr2

60679801

-
Frame-shiftENST00000379348ENST00000537768PHACTR1chr6

12750022

+BCL11Achr2

60679801

-
5CDS-intronENST00000379348ENST00000335712PHACTR1chr6

12750022

+BCL11Achr2

60679801

-
5CDS-intronENST00000379348ENST00000477659PHACTR1chr6

12750022

+BCL11Achr2

60679801

-
5CDS-intronENST00000379348ENST00000358510PHACTR1chr6

12750022

+BCL11Achr2

60679801

-
In-frameENST00000332995ENST00000356842PHACTR1chr6

12750022

+BCL11Achr2

60679801

-
In-frameENST00000332995ENST00000359629PHACTR1chr6

12750022

+BCL11Achr2

60679801

-
In-frameENST00000332995ENST00000538214PHACTR1chr6

12750022

+BCL11Achr2

60679801

-
Frame-shiftENST00000332995ENST00000537768PHACTR1chr6

12750022

+BCL11Achr2

60679801

-
5CDS-intronENST00000332995ENST00000335712PHACTR1chr6

12750022

+BCL11Achr2

60679801

-
5CDS-intronENST00000332995ENST00000477659PHACTR1chr6

12750022

+BCL11Achr2

60679801

-
5CDS-intronENST00000332995ENST00000358510PHACTR1chr6

12750022

+BCL11Achr2

60679801

-
intron-3CDSENST00000482982ENST00000356842PHACTR1chr6

12750022

+BCL11Achr2

60679801

-
intron-3CDSENST00000482982ENST00000359629PHACTR1chr6

12750022

+BCL11Achr2

60679801

-
intron-3CDSENST00000482982ENST00000538214PHACTR1chr6

12750022

+BCL11Achr2

60679801

-
intron-3CDSENST00000482982ENST00000537768PHACTR1chr6

12750022

+BCL11Achr2

60679801

-
intron-intronENST00000482982ENST00000335712PHACTR1chr6

12750022

+BCL11Achr2

60679801

-
intron-intronENST00000482982ENST00000477659PHACTR1chr6

12750022

+BCL11Achr2

60679801

-
intron-intronENST00000482982ENST00000358510PHACTR1chr6

12750022

+BCL11Achr2

60679801

-
intron-3CDSENST00000379345ENST00000356842PHACTR1chr6

12750022

+BCL11Achr2

60679801

-
intron-3CDSENST00000379345ENST00000359629PHACTR1chr6

12750022

+BCL11Achr2

60679801

-
intron-3CDSENST00000379345ENST00000538214PHACTR1chr6

12750022

+BCL11Achr2

60679801

-
intron-3CDSENST00000379345ENST00000537768PHACTR1chr6

12750022

+BCL11Achr2

60679801

-
intron-intronENST00000379345ENST00000335712PHACTR1chr6

12750022

+BCL11Achr2

60679801

-
intron-intronENST00000379345ENST00000477659PHACTR1chr6

12750022

+BCL11Achr2

60679801

-
intron-intronENST00000379345ENST00000358510PHACTR1chr6

12750022

+BCL11Achr2

60679801

-
intron-3CDSENST00000457702ENST00000356842PHACTR1chr6

12750022

+BCL11Achr2

60679801

-
intron-3CDSENST00000457702ENST00000359629PHACTR1chr6

12750022

+BCL11Achr2

60679801

-
intron-3CDSENST00000457702ENST00000538214PHACTR1chr6

12750022

+BCL11Achr2

60679801

-
intron-3CDSENST00000457702ENST00000537768PHACTR1chr6

12750022

+BCL11Achr2

60679801

-
intron-intronENST00000457702ENST00000335712PHACTR1chr6

12750022

+BCL11Achr2

60679801

-
intron-intronENST00000457702ENST00000477659PHACTR1chr6

12750022

+BCL11Achr2

60679801

-
intron-intronENST00000457702ENST00000358510PHACTR1chr6

12750022

+BCL11Achr2

60679801

-
intron-3CDSENST00000379335ENST00000356842PHACTR1chr6

12750022

+BCL11Achr2

60679801

-
intron-3CDSENST00000379335ENST00000359629PHACTR1chr6

12750022

+BCL11Achr2

60679801

-
intron-3CDSENST00000379335ENST00000538214PHACTR1chr6

12750022

+BCL11Achr2

60679801

-
intron-3CDSENST00000379335ENST00000537768PHACTR1chr6

12750022

+BCL11Achr2

60679801

-
intron-intronENST00000379335ENST00000335712PHACTR1chr6

12750022

+BCL11Achr2

60679801

-
intron-intronENST00000379335ENST00000477659PHACTR1chr6

12750022

+BCL11Achr2

60679801

-
intron-intronENST00000379335ENST00000358510PHACTR1chr6

12750022

+BCL11Achr2

60679801

-
intron-3CDSENST00000379329ENST00000356842PHACTR1chr6

12750022

+BCL11Achr2

60679801

-
intron-3CDSENST00000379329ENST00000359629PHACTR1chr6

12750022

+BCL11Achr2

60679801

-
intron-3CDSENST00000379329ENST00000538214PHACTR1chr6

12750022

+BCL11Achr2

60679801

-
intron-3CDSENST00000379329ENST00000537768PHACTR1chr6

12750022

+BCL11Achr2

60679801

-
intron-intronENST00000379329ENST00000335712PHACTR1chr6

12750022

+BCL11Achr2

60679801

-
intron-intronENST00000379329ENST00000477659PHACTR1chr6

12750022

+BCL11Achr2

60679801

-
intron-intronENST00000379329ENST00000358510PHACTR1chr6

12750022

+BCL11Achr2

60679801

-

Top

FusionProtFeatures for PHACTR1_BCL11A


check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
PHACTR1

Q9C0D0

BCL11A

Q9H165

Binds actin monomers (G actin) and plays a role in thereorganization of the actin cytoskeleton and in formation of actinstress fibers. Plays a role in cell motility. Plays a role in theformation of tubules by endothelial cells. Regulates PPP1CAactivity. Required for normal cell survival.{ECO:0000269|PubMed:21798305, ECO:0000269|PubMed:21939755}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page

.

* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
>>>>>>>>>>>>>>>>>>>>>>>>>>>>
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
TgeneBCL11Achr6:12750022chr2:60679801ENST00000335712-04260_373-76836Compositional biasNote=Pro-rich
TgeneBCL11Achr6:12750022chr2:60679801ENST00000335712-04481_509-76836Compositional biasNote=Glu-rich
TgeneBCL11Achr6:12750022chr2:60679801ENST00000358510-03260_373-54802Compositional biasNote=Pro-rich
TgeneBCL11Achr6:12750022chr2:60679801ENST00000358510-03481_509-54802Compositional biasNote=Glu-rich
TgeneBCL11Achr6:12750022chr2:60679801ENST00000359629-35260_373210244Compositional biasNote=Pro-rich
TgeneBCL11Achr6:12750022chr2:60679801ENST00000359629-35481_509210244Compositional biasNote=Glu-rich
TgeneBCL11Achr6:12750022chr2:60679801ENST00000335712-041_210-76836RegionRequired for nuclear body formation and for SUMO1 recruitment
TgeneBCL11Achr6:12750022chr2:60679801ENST00000358510-031_210-54802RegionRequired for nuclear body formation and for SUMO1 recruitment
TgeneBCL11Achr6:12750022chr2:60679801ENST00000335712-04170_193-76836Zinc fingerC2H2-type 1
TgeneBCL11Achr6:12750022chr2:60679801ENST00000335712-04377_399-76836Zinc fingerC2H2-type 2
TgeneBCL11Achr6:12750022chr2:60679801ENST00000335712-04405_429-76836Zinc fingerC2H2-type 3
TgeneBCL11Achr6:12750022chr2:60679801ENST00000335712-04742_764-76836Zinc fingerC2H2-type 4
TgeneBCL11Achr6:12750022chr2:60679801ENST00000335712-04770_792-76836Zinc fingerC2H2-type 5
TgeneBCL11Achr6:12750022chr2:60679801ENST00000335712-04800_823-76836Zinc fingerC2H2-type 6
TgeneBCL11Achr6:12750022chr2:60679801ENST00000356842-35742_764743774Zinc fingerC2H2-type 4
TgeneBCL11Achr6:12750022chr2:60679801ENST00000356842-35770_792743774Zinc fingerC2H2-type 5
TgeneBCL11Achr6:12750022chr2:60679801ENST00000356842-35800_823743774Zinc fingerC2H2-type 6
TgeneBCL11Achr6:12750022chr2:60679801ENST00000358510-03170_193-54802Zinc fingerC2H2-type 1
TgeneBCL11Achr6:12750022chr2:60679801ENST00000358510-03377_399-54802Zinc fingerC2H2-type 2
TgeneBCL11Achr6:12750022chr2:60679801ENST00000358510-03405_429-54802Zinc fingerC2H2-type 3
TgeneBCL11Achr6:12750022chr2:60679801ENST00000358510-03742_764-54802Zinc fingerC2H2-type 4
TgeneBCL11Achr6:12750022chr2:60679801ENST00000358510-03770_792-54802Zinc fingerC2H2-type 5
TgeneBCL11Achr6:12750022chr2:60679801ENST00000358510-03800_823-54802Zinc fingerC2H2-type 6
TgeneBCL11Achr6:12750022chr2:60679801ENST00000359629-35377_399210244Zinc fingerC2H2-type 2
TgeneBCL11Achr6:12750022chr2:60679801ENST00000359629-35405_429210244Zinc fingerC2H2-type 3
TgeneBCL11Achr6:12750022chr2:60679801ENST00000359629-35742_764210244Zinc fingerC2H2-type 4
TgeneBCL11Achr6:12750022chr2:60679801ENST00000359629-35770_792210244Zinc fingerC2H2-type 5
TgeneBCL11Achr6:12750022chr2:60679801ENST00000359629-35800_823210244Zinc fingerC2H2-type 6

- In-frame and not-retained protein feature among the 13 regional features.
>>>>>
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgenePHACTR1chr6:12750022chr2:60679801ENST00000379350+310108_12983485MotifNuclear localization signal
HgenePHACTR1chr6:12750022chr2:60679801ENST00000379350+310138_16383485RepeatNote=RPEL 1
HgenePHACTR1chr6:12750022chr2:60679801ENST00000379350+310422_44783485RepeatNote=RPEL 2
HgenePHACTR1chr6:12750022chr2:60679801ENST00000379350+310460_48483485RepeatNote=RPEL 3
HgenePHACTR1chr6:12750022chr2:60679801ENST00000379350+310498_52383485RepeatNote=RPEL 4
TgeneBCL11Achr6:12750022chr2:60679801ENST00000356842-35260_373743774Compositional biasNote=Pro-rich
TgeneBCL11Achr6:12750022chr2:60679801ENST00000356842-35481_509743774Compositional biasNote=Glu-rich
TgeneBCL11Achr6:12750022chr2:60679801ENST00000356842-351_210743774RegionRequired for nuclear body formation and for SUMO1 recruitment
TgeneBCL11Achr6:12750022chr2:60679801ENST00000359629-351_210210244RegionRequired for nuclear body formation and for SUMO1 recruitment
TgeneBCL11Achr6:12750022chr2:60679801ENST00000356842-35170_193743774Zinc fingerC2H2-type 1
TgeneBCL11Achr6:12750022chr2:60679801ENST00000356842-35377_399743774Zinc fingerC2H2-type 2
TgeneBCL11Achr6:12750022chr2:60679801ENST00000356842-35405_429743774Zinc fingerC2H2-type 3
TgeneBCL11Achr6:12750022chr2:60679801ENST00000359629-35170_193210244Zinc fingerC2H2-type 1


Top

FusionGeneSequence for PHACTR1_BCL11A


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences.
(nt: nucleotides, aa: amino acids)

* Fusion amino acid sequences.
>In-frame_PHACTR1_ENST00000379350_chr6_12750022_+_BCL11A_ENST00000356842_chr2_60679801_-_114aa
MDYPKMDYFLDVESAHRLLDVESAQRFFYSQGAQARRATLLLPPTLMAASSEDDIDRRPIRRVRSKSDTPYLAEARISFNLGAGSSHTPI

>In-frame_PHACTR1_ENST00000379350_chr6_12750022_+_BCL11A_ENST00000359629_chr2_60679801_-_117aa
MDYPKMDYFLDVESAHRLLDVESAQRFFYSQGAQARRATLLLPPTLMAASSEDDIDRRPIRRVRSKSDTPYLAEARISFNLGAGSSHTPI

>In-frame_PHACTR1_ENST00000379350_chr6_12750022_+_BCL11A_ENST00000538214_chr2_60679801_-_117aa
MDYPKMDYFLDVESAHRLLDVESAQRFFYSQGAQARRATLLLPPTLMAASSEDDIDRRPIRRVRSKSDTPYLAEARISFNLGAGSSHTPI

>In-frame_PHACTR1_ENST00000379348_chr6_12750022_+_BCL11A_ENST00000356842_chr2_60679801_-_114aa
MDYPKMDYFLDVESAHRLLDVESAQRFFYSQGAQARRATLLLPPTLMAASSEDDIDRRPIRRVRSKSDTPYLAEARISFNLGAGSSHTPI

>In-frame_PHACTR1_ENST00000379348_chr6_12750022_+_BCL11A_ENST00000359629_chr2_60679801_-_117aa
MDYPKMDYFLDVESAHRLLDVESAQRFFYSQGAQARRATLLLPPTLMAASSEDDIDRRPIRRVRSKSDTPYLAEARISFNLGAGSSHTPI

>In-frame_PHACTR1_ENST00000379348_chr6_12750022_+_BCL11A_ENST00000538214_chr2_60679801_-_117aa
MDYPKMDYFLDVESAHRLLDVESAQRFFYSQGAQARRATLLLPPTLMAASSEDDIDRRPIRRVRSKSDTPYLAEARISFNLGAGSSHTPI

>In-frame_PHACTR1_ENST00000332995_chr6_12750022_+_BCL11A_ENST00000356842_chr2_60679801_-_114aa
MDYPKMDYFLDVESAHRLLDVESAQRFFYSQGAQARRATLLLPPTLMAASSEDDIDRRPIRRVRSKSDTPYLAEARISFNLGAGSSHTPI

>In-frame_PHACTR1_ENST00000332995_chr6_12750022_+_BCL11A_ENST00000359629_chr2_60679801_-_117aa
MDYPKMDYFLDVESAHRLLDVESAQRFFYSQGAQARRATLLLPPTLMAASSEDDIDRRPIRRVRSKSDTPYLAEARISFNLGAGSSHTPI

>In-frame_PHACTR1_ENST00000332995_chr6_12750022_+_BCL11A_ENST00000538214_chr2_60679801_-_117aa
MDYPKMDYFLDVESAHRLLDVESAQRFFYSQGAQARRATLLLPPTLMAASSEDDIDRRPIRRVRSKSDTPYLAEARISFNLGAGSSHTPI


* Fusion transcript sequences (only coding sequence (CDS) region).
>In-frame_PHACTR1_ENST00000379350_chr6_12750022_+_BCL11A_ENST00000356842_chr2_60679801_-_342nt
ATGGATTATCCCAAAATGGATTATTTTCTGGATGTAGAGTCTGCTCACAGACTCTTGGATGTTGAGTCAGCTCAAAGATTCTTCTACAGT
CAAGGAGCTCAAGCTCGCCGGGCGACCCTGCTCCTGCCTCCCACATTAATGGCGGCATCCTCGGAGGATGATATAGACCGGCGGCCCATC
CGGAGAGTGCGCTCCAAGAGCGACACGCCGTACCTCGCAGAGGCCAGGATCTCCTTTAACCTGGGGGCAGGTTCTTCACACACCCCCATT

>In-frame_PHACTR1_ENST00000379350_chr6_12750022_+_BCL11A_ENST00000359629_chr2_60679801_-_352nt
ATGGATTATCCCAAAATGGATTATTTTCTGGATGTAGAGTCTGCTCACAGACTCTTGGATGTTGAGTCAGCTCAAAGATTCTTCTACAGT
CAAGGAGCTCAAGCTCGCCGGGCGACCCTGCTCCTGCCTCCCACATTAATGGCGGCATCCTCGGAGGATGATATAGACCGGCGGCCCATC
CGGAGAGTGCGCTCCAAGAGCGACACGCCGTACCTCGCAGAGGCCAGGATCTCCTTTAACCTGGGGGCAGGTTCTTCACACACCCCCATT

>In-frame_PHACTR1_ENST00000379350_chr6_12750022_+_BCL11A_ENST00000538214_chr2_60679801_-_352nt
ATGGATTATCCCAAAATGGATTATTTTCTGGATGTAGAGTCTGCTCACAGACTCTTGGATGTTGAGTCAGCTCAAAGATTCTTCTACAGT
CAAGGAGCTCAAGCTCGCCGGGCGACCCTGCTCCTGCCTCCCACATTAATGGCGGCATCCTCGGAGGATGATATAGACCGGCGGCCCATC
CGGAGAGTGCGCTCCAAGAGCGACACGCCGTACCTCGCAGAGGCCAGGATCTCCTTTAACCTGGGGGCAGGTTCTTCACACACCCCCATT

>In-frame_PHACTR1_ENST00000379348_chr6_12750022_+_BCL11A_ENST00000356842_chr2_60679801_-_342nt
ATGGATTATCCCAAAATGGATTATTTTCTGGATGTAGAGTCTGCTCACAGACTCTTGGATGTTGAGTCAGCTCAAAGATTCTTCTACAGT
CAAGGAGCTCAAGCTCGCCGGGCGACCCTGCTCCTGCCTCCCACATTAATGGCGGCATCCTCGGAGGATGATATAGACCGGCGGCCCATC
CGGAGAGTGCGCTCCAAGAGCGACACGCCGTACCTCGCAGAGGCCAGGATCTCCTTTAACCTGGGGGCAGGTTCTTCACACACCCCCATT

>In-frame_PHACTR1_ENST00000379348_chr6_12750022_+_BCL11A_ENST00000359629_chr2_60679801_-_352nt
ATGGATTATCCCAAAATGGATTATTTTCTGGATGTAGAGTCTGCTCACAGACTCTTGGATGTTGAGTCAGCTCAAAGATTCTTCTACAGT
CAAGGAGCTCAAGCTCGCCGGGCGACCCTGCTCCTGCCTCCCACATTAATGGCGGCATCCTCGGAGGATGATATAGACCGGCGGCCCATC
CGGAGAGTGCGCTCCAAGAGCGACACGCCGTACCTCGCAGAGGCCAGGATCTCCTTTAACCTGGGGGCAGGTTCTTCACACACCCCCATT

>In-frame_PHACTR1_ENST00000379348_chr6_12750022_+_BCL11A_ENST00000538214_chr2_60679801_-_352nt
ATGGATTATCCCAAAATGGATTATTTTCTGGATGTAGAGTCTGCTCACAGACTCTTGGATGTTGAGTCAGCTCAAAGATTCTTCTACAGT
CAAGGAGCTCAAGCTCGCCGGGCGACCCTGCTCCTGCCTCCCACATTAATGGCGGCATCCTCGGAGGATGATATAGACCGGCGGCCCATC
CGGAGAGTGCGCTCCAAGAGCGACACGCCGTACCTCGCAGAGGCCAGGATCTCCTTTAACCTGGGGGCAGGTTCTTCACACACCCCCATT

>In-frame_PHACTR1_ENST00000332995_chr6_12750022_+_BCL11A_ENST00000356842_chr2_60679801_-_342nt
ATGGATTATCCCAAAATGGATTATTTTCTGGATGTAGAGTCTGCTCACAGACTCTTGGATGTTGAGTCAGCTCAAAGATTCTTCTACAGT
CAAGGAGCTCAAGCTCGCCGGGCGACCCTGCTCCTGCCTCCCACATTAATGGCGGCATCCTCGGAGGATGATATAGACCGGCGGCCCATC
CGGAGAGTGCGCTCCAAGAGCGACACGCCGTACCTCGCAGAGGCCAGGATCTCCTTTAACCTGGGGGCAGGTTCTTCACACACCCCCATT

>In-frame_PHACTR1_ENST00000332995_chr6_12750022_+_BCL11A_ENST00000359629_chr2_60679801_-_352nt
ATGGATTATCCCAAAATGGATTATTTTCTGGATGTAGAGTCTGCTCACAGACTCTTGGATGTTGAGTCAGCTCAAAGATTCTTCTACAGT
CAAGGAGCTCAAGCTCGCCGGGCGACCCTGCTCCTGCCTCCCACATTAATGGCGGCATCCTCGGAGGATGATATAGACCGGCGGCCCATC
CGGAGAGTGCGCTCCAAGAGCGACACGCCGTACCTCGCAGAGGCCAGGATCTCCTTTAACCTGGGGGCAGGTTCTTCACACACCCCCATT

>In-frame_PHACTR1_ENST00000332995_chr6_12750022_+_BCL11A_ENST00000538214_chr2_60679801_-_352nt
ATGGATTATCCCAAAATGGATTATTTTCTGGATGTAGAGTCTGCTCACAGACTCTTGGATGTTGAGTCAGCTCAAAGATTCTTCTACAGT
CAAGGAGCTCAAGCTCGCCGGGCGACCCTGCTCCTGCCTCCCACATTAATGGCGGCATCCTCGGAGGATGATATAGACCGGCGGCCCATC
CGGAGAGTGCGCTCCAAGAGCGACACGCCGTACCTCGCAGAGGCCAGGATCTCCTTTAACCTGGGGGCAGGTTCTTCACACACCCCCATT


* Fusion transcript sequences (Full-length transcript).
>In-frame_PHACTR1_ENST00000379350_chr6_12750022_+_BCL11A_ENST00000356842_chr2_60679801_-_1879nt
TATTTAGCAAGATCAAAGACACTCTGGCTGGAACGGCTCTTGTTTTACCGCTGACAGATAGCCTTTGATTTTTATTTTTTGCAGTGTTCC
AGTGTTTTCTCTCAAAACTCTGTGTTTGGAACATCAAGGATGGATTATCCCAAAATGGATTATTTTCTGGATGTAGAGTCTGCTCACAGA
CTCTTGGATGTTGAGTCAGCTCAAAGATTCTTCTACAGTCAAGGAGCTCAAGCTCGCCGGGCGACCCTGCTCCTGCCTCCCACATTAATG
GCGGCATCCTCGGAGGATGATATAGACCGGCGGCCCATCCGGAGAGTGCGCTCCAAGAGCGACACGCCGTACCTCGCAGAGGCCAGGATC
TCCTTTAACCTGGGGGCAGGTTCTTCACACACCCCCATTCGGCGTAGTACCCAGAGAGCTCAAGATGTGTGGCAGTTTTCGGATGGAAGC
TCGAGAGCCCTTAAGTTCTGAGAAAATTTGAAGCCCCCAGGGGTGGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCATC
CTGCTAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAGGCCTGC
AGCGCCATTTTATTTATATTTTTTAATAAAAAGTAAAAACAAAAAAACAGACCCACATTGGAACAGTGAATCAGTCCCATAGAGAGGGCC
CGTGGACCATCGCTGTCATGAGTGATGCCCTGGCCCTTCTGAAACCAGCCAACCTAATTACCTGTATTGTGGAAATGCGCATGAGTCCCC
AACCCCTTGTTTCTATACATTCTATGTTGTCTTTTAAAAAGTGTGCTTAACATTGACACAATAAATGTTGGAGCTTTAGGTGGTGTTTGC
TTGTTCTTTAATTTTTAATGCTTATAAGACAATGAGGCTGCTTATGATTTTGTACTTCTGTACCTGTTTCCTACAGACACCCATCGGGTG
GGTAGGAGGAACAGATTTGAGAAATGGGCAGGAGATGTAGGAGGGGAACTAGGTTACCGCTTATCAGATGGCATAAATTTTCAAGGAGAA
TCAAAATGCAAAACTTGGGAATAAATCATAGCAATATCATAATTAATGTAGTAGTAATATTGCTGTTTATTAATGCTGAAGTGTGGTTTT
CCTAACTGTCTGACTTATAATTTGCATACCATTAAATAATGCATAATATGGCACGCCGAATCCTGTTTTTCAAATATATGCTTTTGGTGG
CTACCATGCAGGATTTGAATTTGTCTTTTAATTTAGCTTAGGAAAGAACATCACTGGGCGAGCGGTAAATCCTAAAGAAGGTGATAAATG
TCAGTAGTTTCTTATTAAATATTCTAATTTTAGGTTCCCAAACCTTCAGGAAATATATCTTAATGCAGACAAACAAACATAAAACTTCTT
TAGTACTTACATCAGGAAATTTGGGGCAGATTTTAGAGGGGGGAAATTATAGGAGGAAAGAAGTTCACATCAGAACAGACAATCACAGCA
ATGCTCTATTCCTTAGAAATTAGTGCCACAAATAAGTTACATCTACAAACAGGTGGTAAAAATTCTTTCTGGCCCAGTTAATTTGCACAG
AACTTTTCTCAGTTTGGTATTTTTTACTGCTTGGAGATCCAGAAGAGAATTAGAAACAACATAGCAAATTAAAATAGGTTTGTCAATAAT
AGAGCTCAGACACCTGTGTGCTGTAGATTCACATACAGGCCGTGAACCTAAGTGGGGAAAATCCTACCTATCCACCTTCTGGCTAGATTA

>In-frame_PHACTR1_ENST00000379350_chr6_12750022_+_BCL11A_ENST00000359629_chr2_60679801_-_1879nt
TATTTAGCAAGATCAAAGACACTCTGGCTGGAACGGCTCTTGTTTTACCGCTGACAGATAGCCTTTGATTTTTATTTTTTGCAGTGTTCC
AGTGTTTTCTCTCAAAACTCTGTGTTTGGAACATCAAGGATGGATTATCCCAAAATGGATTATTTTCTGGATGTAGAGTCTGCTCACAGA
CTCTTGGATGTTGAGTCAGCTCAAAGATTCTTCTACAGTCAAGGAGCTCAAGCTCGCCGGGCGACCCTGCTCCTGCCTCCCACATTAATG
GCGGCATCCTCGGAGGATGATATAGACCGGCGGCCCATCCGGAGAGTGCGCTCCAAGAGCGACACGCCGTACCTCGCAGAGGCCAGGATC
TCCTTTAACCTGGGGGCAGGTTCTTCACACACCCCCATTCGGCGTAGTACCCAGAGAGCTCAAGATGTGTGGCAGTTTTCGGATGGAAGC
TCGAGAGCCCTTAAGTTCTGAGAAAATTTGAAGCCCCCAGGGGTGGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCATC
CTGCTAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAGGCCTGC
AGCGCCATTTTATTTATATTTTTTAATAAAAAGTAAAAACAAAAAAACAGACCCACATTGGAACAGTGAATCAGTCCCATAGAGAGGGCC
CGTGGACCATCGCTGTCATGAGTGATGCCCTGGCCCTTCTGAAACCAGCCAACCTAATTACCTGTATTGTGGAAATGCGCATGAGTCCCC
AACCCCTTGTTTCTATACATTCTATGTTGTCTTTTAAAAAGTGTGCTTAACATTGACACAATAAATGTTGGAGCTTTAGGTGGTGTTTGC
TTGTTCTTTAATTTTTAATGCTTATAAGACAATGAGGCTGCTTATGATTTTGTACTTCTGTACCTGTTTCCTACAGACACCCATCGGGTG
GGTAGGAGGAACAGATTTGAGAAATGGGCAGGAGATGTAGGAGGGGAACTAGGTTACCGCTTATCAGATGGCATAAATTTTCAAGGAGAA
TCAAAATGCAAAACTTGGGAATAAATCATAGCAATATCATAATTAATGTAGTAGTAATATTGCTGTTTATTAATGCTGAAGTGTGGTTTT
CCTAACTGTCTGACTTATAATTTGCATACCATTAAATAATGCATAATATGGCACGCCGAATCCTGTTTTTCAAATATATGCTTTTGGTGG
CTACCATGCAGGATTTGAATTTGTCTTTTAATTTAGCTTAGGAAAGAACATCACTGGGCGAGCGGTAAATCCTAAAGAAGGTGATAAATG
TCAGTAGTTTCTTATTAAATATTCTAATTTTAGGTTCCCAAACCTTCAGGAAATATATCTTAATGCAGACAAACAAACATAAAACTTCTT
TAGTACTTACATCAGGAAATTTGGGGCAGATTTTAGAGGGGGGAAATTATAGGAGGAAAGAAGTTCACATCAGAACAGACAATCACAGCA
ATGCTCTATTCCTTAGAAATTAGTGCCACAAATAAGTTACATCTACAAACAGGTGGTAAAAATTCTTTCTGGCCCAGTTAATTTGCACAG
AACTTTTCTCAGTTTGGTATTTTTTACTGCTTGGAGATCCAGAAGAGAATTAGAAACAACATAGCAAATTAAAATAGGTTTGTCAATAAT
AGAGCTCAGACACCTGTGTGCTGTAGATTCACATACAGGCCGTGAACCTAAGTGGGGAAAATCCTACCTATCCACCTTCTGGCTAGATTA

>In-frame_PHACTR1_ENST00000379350_chr6_12750022_+_BCL11A_ENST00000538214_chr2_60679801_-_624nt
TATTTAGCAAGATCAAAGACACTCTGGCTGGAACGGCTCTTGTTTTACCGCTGACAGATAGCCTTTGATTTTTATTTTTTGCAGTGTTCC
AGTGTTTTCTCTCAAAACTCTGTGTTTGGAACATCAAGGATGGATTATCCCAAAATGGATTATTTTCTGGATGTAGAGTCTGCTCACAGA
CTCTTGGATGTTGAGTCAGCTCAAAGATTCTTCTACAGTCAAGGAGCTCAAGCTCGCCGGGCGACCCTGCTCCTGCCTCCCACATTAATG
GCGGCATCCTCGGAGGATGATATAGACCGGCGGCCCATCCGGAGAGTGCGCTCCAAGAGCGACACGCCGTACCTCGCAGAGGCCAGGATC
TCCTTTAACCTGGGGGCAGGTTCTTCACACACCCCCATTCGGCGTAGTACCCAGAGAGCTCAAGATGTGTGGCAGTTTTCGGATGGAAGC
TCGAGAGCCCTTAAGTTCTGAGAAAATTTGAAGCCCCCAGGGGTGGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCATC

>In-frame_PHACTR1_ENST00000379348_chr6_12750022_+_BCL11A_ENST00000356842_chr2_60679801_-_1927nt
GATGAGCTGAGGATCAACACTCACAACGGCTGACACTTAATGACGCTATTTATCAAATAGACCTTTTGAAAACTGATAGCATGTGAATTT
AACAGTATATGTTCCAGAGAATATAAAGCAAGGAAAGGCTGGTGTTCCAGTGTTTTCTCTCAAAACTCTGTGTTTGGAACATCAAGGATG
GATTATCCCAAAATGGATTATTTTCTGGATGTAGAGTCTGCTCACAGACTCTTGGATGTTGAGTCAGCTCAAAGATTCTTCTACAGTCAA
GGAGCTCAAGCTCGCCGGGCGACCCTGCTCCTGCCTCCCACATTAATGGCGGCATCCTCGGAGGATGATATAGACCGGCGGCCCATCCGG
AGAGTGCGCTCCAAGAGCGACACGCCGTACCTCGCAGAGGCCAGGATCTCCTTTAACCTGGGGGCAGGTTCTTCACACACCCCCATTCGG
CGTAGTACCCAGAGAGCTCAAGATGTGTGGCAGTTTTCGGATGGAAGCTCGAGAGCCCTTAAGTTCTGAGAAAATTTGAAGCCCCCAGGG
GTGGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCATCCTGCTAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGC
CGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAGGCCTGCAGCGCCATTTTATTTATATTTTTTAATAAAAAGTAAAAACAA
AAAAACAGACCCACATTGGAACAGTGAATCAGTCCCATAGAGAGGGCCCGTGGACCATCGCTGTCATGAGTGATGCCCTGGCCCTTCTGA
AACCAGCCAACCTAATTACCTGTATTGTGGAAATGCGCATGAGTCCCCAACCCCTTGTTTCTATACATTCTATGTTGTCTTTTAAAAAGT
GTGCTTAACATTGACACAATAAATGTTGGAGCTTTAGGTGGTGTTTGCTTGTTCTTTAATTTTTAATGCTTATAAGACAATGAGGCTGCT
TATGATTTTGTACTTCTGTACCTGTTTCCTACAGACACCCATCGGGTGGGTAGGAGGAACAGATTTGAGAAATGGGCAGGAGATGTAGGA
GGGGAACTAGGTTACCGCTTATCAGATGGCATAAATTTTCAAGGAGAATCAAAATGCAAAACTTGGGAATAAATCATAGCAATATCATAA
TTAATGTAGTAGTAATATTGCTGTTTATTAATGCTGAAGTGTGGTTTTCCTAACTGTCTGACTTATAATTTGCATACCATTAAATAATGC
ATAATATGGCACGCCGAATCCTGTTTTTCAAATATATGCTTTTGGTGGCTACCATGCAGGATTTGAATTTGTCTTTTAATTTAGCTTAGG
AAAGAACATCACTGGGCGAGCGGTAAATCCTAAAGAAGGTGATAAATGTCAGTAGTTTCTTATTAAATATTCTAATTTTAGGTTCCCAAA
CCTTCAGGAAATATATCTTAATGCAGACAAACAAACATAAAACTTCTTTAGTACTTACATCAGGAAATTTGGGGCAGATTTTAGAGGGGG
GAAATTATAGGAGGAAAGAAGTTCACATCAGAACAGACAATCACAGCAATGCTCTATTCCTTAGAAATTAGTGCCACAAATAAGTTACAT
CTACAAACAGGTGGTAAAAATTCTTTCTGGCCCAGTTAATTTGCACAGAACTTTTCTCAGTTTGGTATTTTTTACTGCTTGGAGATCCAG
AAGAGAATTAGAAACAACATAGCAAATTAAAATAGGTTTGTCAATAATAGAGCTCAGACACCTGTGTGCTGTAGATTCACATACAGGCCG
TGAACCTAAGTGGGGAAAATCCTACCTATCCACCTTCTGGCTAGATTACCTAGCTTAGTGAAAAGATAGCCAAATAATTGGCATGTGAAT

>In-frame_PHACTR1_ENST00000379348_chr6_12750022_+_BCL11A_ENST00000359629_chr2_60679801_-_1927nt
GATGAGCTGAGGATCAACACTCACAACGGCTGACACTTAATGACGCTATTTATCAAATAGACCTTTTGAAAACTGATAGCATGTGAATTT
AACAGTATATGTTCCAGAGAATATAAAGCAAGGAAAGGCTGGTGTTCCAGTGTTTTCTCTCAAAACTCTGTGTTTGGAACATCAAGGATG
GATTATCCCAAAATGGATTATTTTCTGGATGTAGAGTCTGCTCACAGACTCTTGGATGTTGAGTCAGCTCAAAGATTCTTCTACAGTCAA
GGAGCTCAAGCTCGCCGGGCGACCCTGCTCCTGCCTCCCACATTAATGGCGGCATCCTCGGAGGATGATATAGACCGGCGGCCCATCCGG
AGAGTGCGCTCCAAGAGCGACACGCCGTACCTCGCAGAGGCCAGGATCTCCTTTAACCTGGGGGCAGGTTCTTCACACACCCCCATTCGG
CGTAGTACCCAGAGAGCTCAAGATGTGTGGCAGTTTTCGGATGGAAGCTCGAGAGCCCTTAAGTTCTGAGAAAATTTGAAGCCCCCAGGG
GTGGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCATCCTGCTAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGC
CGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAGGCCTGCAGCGCCATTTTATTTATATTTTTTAATAAAAAGTAAAAACAA
AAAAACAGACCCACATTGGAACAGTGAATCAGTCCCATAGAGAGGGCCCGTGGACCATCGCTGTCATGAGTGATGCCCTGGCCCTTCTGA
AACCAGCCAACCTAATTACCTGTATTGTGGAAATGCGCATGAGTCCCCAACCCCTTGTTTCTATACATTCTATGTTGTCTTTTAAAAAGT
GTGCTTAACATTGACACAATAAATGTTGGAGCTTTAGGTGGTGTTTGCTTGTTCTTTAATTTTTAATGCTTATAAGACAATGAGGCTGCT
TATGATTTTGTACTTCTGTACCTGTTTCCTACAGACACCCATCGGGTGGGTAGGAGGAACAGATTTGAGAAATGGGCAGGAGATGTAGGA
GGGGAACTAGGTTACCGCTTATCAGATGGCATAAATTTTCAAGGAGAATCAAAATGCAAAACTTGGGAATAAATCATAGCAATATCATAA
TTAATGTAGTAGTAATATTGCTGTTTATTAATGCTGAAGTGTGGTTTTCCTAACTGTCTGACTTATAATTTGCATACCATTAAATAATGC
ATAATATGGCACGCCGAATCCTGTTTTTCAAATATATGCTTTTGGTGGCTACCATGCAGGATTTGAATTTGTCTTTTAATTTAGCTTAGG
AAAGAACATCACTGGGCGAGCGGTAAATCCTAAAGAAGGTGATAAATGTCAGTAGTTTCTTATTAAATATTCTAATTTTAGGTTCCCAAA
CCTTCAGGAAATATATCTTAATGCAGACAAACAAACATAAAACTTCTTTAGTACTTACATCAGGAAATTTGGGGCAGATTTTAGAGGGGG
GAAATTATAGGAGGAAAGAAGTTCACATCAGAACAGACAATCACAGCAATGCTCTATTCCTTAGAAATTAGTGCCACAAATAAGTTACAT
CTACAAACAGGTGGTAAAAATTCTTTCTGGCCCAGTTAATTTGCACAGAACTTTTCTCAGTTTGGTATTTTTTACTGCTTGGAGATCCAG
AAGAGAATTAGAAACAACATAGCAAATTAAAATAGGTTTGTCAATAATAGAGCTCAGACACCTGTGTGCTGTAGATTCACATACAGGCCG
TGAACCTAAGTGGGGAAAATCCTACCTATCCACCTTCTGGCTAGATTACCTAGCTTAGTGAAAAGATAGCCAAATAATTGGCATGTGAAT

>In-frame_PHACTR1_ENST00000379348_chr6_12750022_+_BCL11A_ENST00000538214_chr2_60679801_-_672nt
GATGAGCTGAGGATCAACACTCACAACGGCTGACACTTAATGACGCTATTTATCAAATAGACCTTTTGAAAACTGATAGCATGTGAATTT
AACAGTATATGTTCCAGAGAATATAAAGCAAGGAAAGGCTGGTGTTCCAGTGTTTTCTCTCAAAACTCTGTGTTTGGAACATCAAGGATG
GATTATCCCAAAATGGATTATTTTCTGGATGTAGAGTCTGCTCACAGACTCTTGGATGTTGAGTCAGCTCAAAGATTCTTCTACAGTCAA
GGAGCTCAAGCTCGCCGGGCGACCCTGCTCCTGCCTCCCACATTAATGGCGGCATCCTCGGAGGATGATATAGACCGGCGGCCCATCCGG
AGAGTGCGCTCCAAGAGCGACACGCCGTACCTCGCAGAGGCCAGGATCTCCTTTAACCTGGGGGCAGGTTCTTCACACACCCCCATTCGG
CGTAGTACCCAGAGAGCTCAAGATGTGTGGCAGTTTTCGGATGGAAGCTCGAGAGCCCTTAAGTTCTGAGAAAATTTGAAGCCCCCAGGG
GTGGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCATCCTGCTAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGC

>In-frame_PHACTR1_ENST00000332995_chr6_12750022_+_BCL11A_ENST00000356842_chr2_60679801_-_1750nt
ATGGATTATCCCAAAATGGATTATTTTCTGGATGTAGAGTCTGCTCACAGACTCTTGGATGTTGAGTCAGCTCAAAGATTCTTCTACAGT
CAAGGAGCTCAAGCTCGCCGGGCGACCCTGCTCCTGCCTCCCACATTAATGGCGGCATCCTCGGAGGATGATATAGACCGGCGGCCCATC
CGGAGAGTGCGCTCCAAGAGCGACACGCCGTACCTCGCAGAGGCCAGGATCTCCTTTAACCTGGGGGCAGGTTCTTCACACACCCCCATT
CGGCGTAGTACCCAGAGAGCTCAAGATGTGTGGCAGTTTTCGGATGGAAGCTCGAGAGCCCTTAAGTTCTGAGAAAATTTGAAGCCCCCA
GGGGTGGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCATCCTGCTAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGA
AGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAGGCCTGCAGCGCCATTTTATTTATATTTTTTAATAAAAAGTAAAAA
CAAAAAAACAGACCCACATTGGAACAGTGAATCAGTCCCATAGAGAGGGCCCGTGGACCATCGCTGTCATGAGTGATGCCCTGGCCCTTC
TGAAACCAGCCAACCTAATTACCTGTATTGTGGAAATGCGCATGAGTCCCCAACCCCTTGTTTCTATACATTCTATGTTGTCTTTTAAAA
AGTGTGCTTAACATTGACACAATAAATGTTGGAGCTTTAGGTGGTGTTTGCTTGTTCTTTAATTTTTAATGCTTATAAGACAATGAGGCT
GCTTATGATTTTGTACTTCTGTACCTGTTTCCTACAGACACCCATCGGGTGGGTAGGAGGAACAGATTTGAGAAATGGGCAGGAGATGTA
GGAGGGGAACTAGGTTACCGCTTATCAGATGGCATAAATTTTCAAGGAGAATCAAAATGCAAAACTTGGGAATAAATCATAGCAATATCA
TAATTAATGTAGTAGTAATATTGCTGTTTATTAATGCTGAAGTGTGGTTTTCCTAACTGTCTGACTTATAATTTGCATACCATTAAATAA
TGCATAATATGGCACGCCGAATCCTGTTTTTCAAATATATGCTTTTGGTGGCTACCATGCAGGATTTGAATTTGTCTTTTAATTTAGCTT
AGGAAAGAACATCACTGGGCGAGCGGTAAATCCTAAAGAAGGTGATAAATGTCAGTAGTTTCTTATTAAATATTCTAATTTTAGGTTCCC
AAACCTTCAGGAAATATATCTTAATGCAGACAAACAAACATAAAACTTCTTTAGTACTTACATCAGGAAATTTGGGGCAGATTTTAGAGG
GGGGAAATTATAGGAGGAAAGAAGTTCACATCAGAACAGACAATCACAGCAATGCTCTATTCCTTAGAAATTAGTGCCACAAATAAGTTA
CATCTACAAACAGGTGGTAAAAATTCTTTCTGGCCCAGTTAATTTGCACAGAACTTTTCTCAGTTTGGTATTTTTTACTGCTTGGAGATC
CAGAAGAGAATTAGAAACAACATAGCAAATTAAAATAGGTTTGTCAATAATAGAGCTCAGACACCTGTGTGCTGTAGATTCACATACAGG
CCGTGAACCTAAGTGGGGAAAATCCTACCTATCCACCTTCTGGCTAGATTACCTAGCTTAGTGAAAAGATAGCCAAATAATTGGCATGTG

>In-frame_PHACTR1_ENST00000332995_chr6_12750022_+_BCL11A_ENST00000359629_chr2_60679801_-_1750nt
ATGGATTATCCCAAAATGGATTATTTTCTGGATGTAGAGTCTGCTCACAGACTCTTGGATGTTGAGTCAGCTCAAAGATTCTTCTACAGT
CAAGGAGCTCAAGCTCGCCGGGCGACCCTGCTCCTGCCTCCCACATTAATGGCGGCATCCTCGGAGGATGATATAGACCGGCGGCCCATC
CGGAGAGTGCGCTCCAAGAGCGACACGCCGTACCTCGCAGAGGCCAGGATCTCCTTTAACCTGGGGGCAGGTTCTTCACACACCCCCATT
CGGCGTAGTACCCAGAGAGCTCAAGATGTGTGGCAGTTTTCGGATGGAAGCTCGAGAGCCCTTAAGTTCTGAGAAAATTTGAAGCCCCCA
GGGGTGGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCATCCTGCTAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGA
AGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAGGCCTGCAGCGCCATTTTATTTATATTTTTTAATAAAAAGTAAAAA
CAAAAAAACAGACCCACATTGGAACAGTGAATCAGTCCCATAGAGAGGGCCCGTGGACCATCGCTGTCATGAGTGATGCCCTGGCCCTTC
TGAAACCAGCCAACCTAATTACCTGTATTGTGGAAATGCGCATGAGTCCCCAACCCCTTGTTTCTATACATTCTATGTTGTCTTTTAAAA
AGTGTGCTTAACATTGACACAATAAATGTTGGAGCTTTAGGTGGTGTTTGCTTGTTCTTTAATTTTTAATGCTTATAAGACAATGAGGCT
GCTTATGATTTTGTACTTCTGTACCTGTTTCCTACAGACACCCATCGGGTGGGTAGGAGGAACAGATTTGAGAAATGGGCAGGAGATGTA
GGAGGGGAACTAGGTTACCGCTTATCAGATGGCATAAATTTTCAAGGAGAATCAAAATGCAAAACTTGGGAATAAATCATAGCAATATCA
TAATTAATGTAGTAGTAATATTGCTGTTTATTAATGCTGAAGTGTGGTTTTCCTAACTGTCTGACTTATAATTTGCATACCATTAAATAA
TGCATAATATGGCACGCCGAATCCTGTTTTTCAAATATATGCTTTTGGTGGCTACCATGCAGGATTTGAATTTGTCTTTTAATTTAGCTT
AGGAAAGAACATCACTGGGCGAGCGGTAAATCCTAAAGAAGGTGATAAATGTCAGTAGTTTCTTATTAAATATTCTAATTTTAGGTTCCC
AAACCTTCAGGAAATATATCTTAATGCAGACAAACAAACATAAAACTTCTTTAGTACTTACATCAGGAAATTTGGGGCAGATTTTAGAGG
GGGGAAATTATAGGAGGAAAGAAGTTCACATCAGAACAGACAATCACAGCAATGCTCTATTCCTTAGAAATTAGTGCCACAAATAAGTTA
CATCTACAAACAGGTGGTAAAAATTCTTTCTGGCCCAGTTAATTTGCACAGAACTTTTCTCAGTTTGGTATTTTTTACTGCTTGGAGATC
CAGAAGAGAATTAGAAACAACATAGCAAATTAAAATAGGTTTGTCAATAATAGAGCTCAGACACCTGTGTGCTGTAGATTCACATACAGG
CCGTGAACCTAAGTGGGGAAAATCCTACCTATCCACCTTCTGGCTAGATTACCTAGCTTAGTGAAAAGATAGCCAAATAATTGGCATGTG

>In-frame_PHACTR1_ENST00000332995_chr6_12750022_+_BCL11A_ENST00000538214_chr2_60679801_-_495nt
ATGGATTATCCCAAAATGGATTATTTTCTGGATGTAGAGTCTGCTCACAGACTCTTGGATGTTGAGTCAGCTCAAAGATTCTTCTACAGT
CAAGGAGCTCAAGCTCGCCGGGCGACCCTGCTCCTGCCTCCCACATTAATGGCGGCATCCTCGGAGGATGATATAGACCGGCGGCCCATC
CGGAGAGTGCGCTCCAAGAGCGACACGCCGTACCTCGCAGAGGCCAGGATCTCCTTTAACCTGGGGGCAGGTTCTTCACACACCCCCATT
CGGCGTAGTACCCAGAGAGCTCAAGATGTGTGGCAGTTTTCGGATGGAAGCTCGAGAGCCCTTAAGTTCTGAGAAAATTTGAAGCCCCCA
GGGGTGGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCATCCTGCTAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGA


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FusionGenePPI for PHACTR1_BCL11A


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page

.

check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors
PHACTR1ACTA1, PPP1CA, TRIM25BCL11ANR2F1, CHD4, MTA2, MTA1, HDAC1, MBD3, SIRT1, BCL6, BCL11A, APP, CDK4, CDK6, HDAC2, YME1L1, CDCA3, ACTC1, NR2F2, NR2E1, NR2E3, NR2F6, LMO1, NCK2, ZBTB24, GMCL1P1, UBE2I, PIAS3, PHF20L1, RBBP7, UBXN4, MBD3L1, FGFR2


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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RelatedDrugs for PHACTR1_BCL11A


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.0 2018-04-02)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for PHACTR1_BCL11A


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource
HgenePHACTR1C1956346Coronary Artery Disease3CTD_human
HgenePHACTR1C0027051Myocardial Infarction2CTD_human
HgenePHACTR1C0338480Common Migraine1CTD_human
TgeneBCL11AC0003635Apraxias1CTD_human
TgeneBCL11AC0010606Adenoid Cystic Carcinoma1CTD_human
TgeneBCL11AC0023014Language Development Disorders1CTD_human
TgeneBCL11AC0032460Polycystic Ovary Syndrome1CTD_human
TgeneBCL11AC0036095Salivary Gland Neoplasms1CTD_human
TgeneBCL11AC0036341Schizophrenia1PSYGENET