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Fusion gene ID: 26852 |
FusionGeneSummary for PHACTR1_BCL11A |
Fusion gene summary |
Fusion gene information | Fusion gene name: PHACTR1_BCL11A | Fusion gene ID: 26852 | Hgene | Tgene | Gene symbol | PHACTR1 | BCL11A | Gene ID | 221692 | 53335 |
Gene name | phosphatase and actin regulator 1 | B cell CLL/lymphoma 11A | |
Synonyms | RPEL|RPEL1|dJ257A7.2 | BCL11A-L|BCL11A-S|BCL11A-XL|BCL11a-M|CTIP1|DILOS|EVI9|HBFQTL5|ZNF856 | |
Cytomap | 6p24.1 | 2p16.1 | |
Type of gene | protein-coding | protein-coding | |
Description | phosphatase and actin regulator 1RPEL repeat containing 1 | B-cell lymphoma/leukemia 11AB-cell CLL/lymphoma 11A (zinc finger protein) isoform 2BCL11A B-cell CLL/lymphoma 11A (zinc finger protein) isoform 1C2H2-type zinc finger proteinCOUP-TF-interacting protein 1ecotropic viral integration site 9 homologecot | |
Modification date | 20180519 | 20180527 | |
UniProtAcc | Q9C0D0 | Q9H165 | |
Ensembl transtripts involved in fusion gene | ENST00000379350, ENST00000379348, ENST00000332995, ENST00000482982, ENST00000379345, ENST00000457702, ENST00000379335, ENST00000379329, | ENST00000356842, ENST00000359629, ENST00000538214, ENST00000537768, ENST00000335712, ENST00000477659, ENST00000358510, | |
Fusion gene scores | * DoF score | 2 X 3 X 2=12 | 9 X 8 X 3=216 |
# samples | 3 | 8 | |
** MAII score | log2(3/12*10)=1.32192809488736 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | log2(8/216*10)=-1.43295940727611 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: PHACTR1 [Title/Abstract] AND BCL11A [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation | Oncogene involved fusion gene, in-frame and retained their domain. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Tgene | BCL11A | GO:0000122 | negative regulation of transcription by RNA polymerase II | 19153051 |
Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | RV | LUAD | TCGA-44-7670-01A | PHACTR1 | chr6 | 12750022 | + | BCL11A | chr2 | 60679801 | - |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000379350 | ENST00000356842 | PHACTR1 | chr6 | 12750022 | + | BCL11A | chr2 | 60679801 | - |
In-frame | ENST00000379350 | ENST00000359629 | PHACTR1 | chr6 | 12750022 | + | BCL11A | chr2 | 60679801 | - |
In-frame | ENST00000379350 | ENST00000538214 | PHACTR1 | chr6 | 12750022 | + | BCL11A | chr2 | 60679801 | - |
Frame-shift | ENST00000379350 | ENST00000537768 | PHACTR1 | chr6 | 12750022 | + | BCL11A | chr2 | 60679801 | - |
5CDS-intron | ENST00000379350 | ENST00000335712 | PHACTR1 | chr6 | 12750022 | + | BCL11A | chr2 | 60679801 | - |
5CDS-intron | ENST00000379350 | ENST00000477659 | PHACTR1 | chr6 | 12750022 | + | BCL11A | chr2 | 60679801 | - |
5CDS-intron | ENST00000379350 | ENST00000358510 | PHACTR1 | chr6 | 12750022 | + | BCL11A | chr2 | 60679801 | - |
In-frame | ENST00000379348 | ENST00000356842 | PHACTR1 | chr6 | 12750022 | + | BCL11A | chr2 | 60679801 | - |
In-frame | ENST00000379348 | ENST00000359629 | PHACTR1 | chr6 | 12750022 | + | BCL11A | chr2 | 60679801 | - |
In-frame | ENST00000379348 | ENST00000538214 | PHACTR1 | chr6 | 12750022 | + | BCL11A | chr2 | 60679801 | - |
Frame-shift | ENST00000379348 | ENST00000537768 | PHACTR1 | chr6 | 12750022 | + | BCL11A | chr2 | 60679801 | - |
5CDS-intron | ENST00000379348 | ENST00000335712 | PHACTR1 | chr6 | 12750022 | + | BCL11A | chr2 | 60679801 | - |
5CDS-intron | ENST00000379348 | ENST00000477659 | PHACTR1 | chr6 | 12750022 | + | BCL11A | chr2 | 60679801 | - |
5CDS-intron | ENST00000379348 | ENST00000358510 | PHACTR1 | chr6 | 12750022 | + | BCL11A | chr2 | 60679801 | - |
In-frame | ENST00000332995 | ENST00000356842 | PHACTR1 | chr6 | 12750022 | + | BCL11A | chr2 | 60679801 | - |
In-frame | ENST00000332995 | ENST00000359629 | PHACTR1 | chr6 | 12750022 | + | BCL11A | chr2 | 60679801 | - |
In-frame | ENST00000332995 | ENST00000538214 | PHACTR1 | chr6 | 12750022 | + | BCL11A | chr2 | 60679801 | - |
Frame-shift | ENST00000332995 | ENST00000537768 | PHACTR1 | chr6 | 12750022 | + | BCL11A | chr2 | 60679801 | - |
5CDS-intron | ENST00000332995 | ENST00000335712 | PHACTR1 | chr6 | 12750022 | + | BCL11A | chr2 | 60679801 | - |
5CDS-intron | ENST00000332995 | ENST00000477659 | PHACTR1 | chr6 | 12750022 | + | BCL11A | chr2 | 60679801 | - |
5CDS-intron | ENST00000332995 | ENST00000358510 | PHACTR1 | chr6 | 12750022 | + | BCL11A | chr2 | 60679801 | - |
intron-3CDS | ENST00000482982 | ENST00000356842 | PHACTR1 | chr6 | 12750022 | + | BCL11A | chr2 | 60679801 | - |
intron-3CDS | ENST00000482982 | ENST00000359629 | PHACTR1 | chr6 | 12750022 | + | BCL11A | chr2 | 60679801 | - |
intron-3CDS | ENST00000482982 | ENST00000538214 | PHACTR1 | chr6 | 12750022 | + | BCL11A | chr2 | 60679801 | - |
intron-3CDS | ENST00000482982 | ENST00000537768 | PHACTR1 | chr6 | 12750022 | + | BCL11A | chr2 | 60679801 | - |
intron-intron | ENST00000482982 | ENST00000335712 | PHACTR1 | chr6 | 12750022 | + | BCL11A | chr2 | 60679801 | - |
intron-intron | ENST00000482982 | ENST00000477659 | PHACTR1 | chr6 | 12750022 | + | BCL11A | chr2 | 60679801 | - |
intron-intron | ENST00000482982 | ENST00000358510 | PHACTR1 | chr6 | 12750022 | + | BCL11A | chr2 | 60679801 | - |
intron-3CDS | ENST00000379345 | ENST00000356842 | PHACTR1 | chr6 | 12750022 | + | BCL11A | chr2 | 60679801 | - |
intron-3CDS | ENST00000379345 | ENST00000359629 | PHACTR1 | chr6 | 12750022 | + | BCL11A | chr2 | 60679801 | - |
intron-3CDS | ENST00000379345 | ENST00000538214 | PHACTR1 | chr6 | 12750022 | + | BCL11A | chr2 | 60679801 | - |
intron-3CDS | ENST00000379345 | ENST00000537768 | PHACTR1 | chr6 | 12750022 | + | BCL11A | chr2 | 60679801 | - |
intron-intron | ENST00000379345 | ENST00000335712 | PHACTR1 | chr6 | 12750022 | + | BCL11A | chr2 | 60679801 | - |
intron-intron | ENST00000379345 | ENST00000477659 | PHACTR1 | chr6 | 12750022 | + | BCL11A | chr2 | 60679801 | - |
intron-intron | ENST00000379345 | ENST00000358510 | PHACTR1 | chr6 | 12750022 | + | BCL11A | chr2 | 60679801 | - |
intron-3CDS | ENST00000457702 | ENST00000356842 | PHACTR1 | chr6 | 12750022 | + | BCL11A | chr2 | 60679801 | - |
intron-3CDS | ENST00000457702 | ENST00000359629 | PHACTR1 | chr6 | 12750022 | + | BCL11A | chr2 | 60679801 | - |
intron-3CDS | ENST00000457702 | ENST00000538214 | PHACTR1 | chr6 | 12750022 | + | BCL11A | chr2 | 60679801 | - |
intron-3CDS | ENST00000457702 | ENST00000537768 | PHACTR1 | chr6 | 12750022 | + | BCL11A | chr2 | 60679801 | - |
intron-intron | ENST00000457702 | ENST00000335712 | PHACTR1 | chr6 | 12750022 | + | BCL11A | chr2 | 60679801 | - |
intron-intron | ENST00000457702 | ENST00000477659 | PHACTR1 | chr6 | 12750022 | + | BCL11A | chr2 | 60679801 | - |
intron-intron | ENST00000457702 | ENST00000358510 | PHACTR1 | chr6 | 12750022 | + | BCL11A | chr2 | 60679801 | - |
intron-3CDS | ENST00000379335 | ENST00000356842 | PHACTR1 | chr6 | 12750022 | + | BCL11A | chr2 | 60679801 | - |
intron-3CDS | ENST00000379335 | ENST00000359629 | PHACTR1 | chr6 | 12750022 | + | BCL11A | chr2 | 60679801 | - |
intron-3CDS | ENST00000379335 | ENST00000538214 | PHACTR1 | chr6 | 12750022 | + | BCL11A | chr2 | 60679801 | - |
intron-3CDS | ENST00000379335 | ENST00000537768 | PHACTR1 | chr6 | 12750022 | + | BCL11A | chr2 | 60679801 | - |
intron-intron | ENST00000379335 | ENST00000335712 | PHACTR1 | chr6 | 12750022 | + | BCL11A | chr2 | 60679801 | - |
intron-intron | ENST00000379335 | ENST00000477659 | PHACTR1 | chr6 | 12750022 | + | BCL11A | chr2 | 60679801 | - |
intron-intron | ENST00000379335 | ENST00000358510 | PHACTR1 | chr6 | 12750022 | + | BCL11A | chr2 | 60679801 | - |
intron-3CDS | ENST00000379329 | ENST00000356842 | PHACTR1 | chr6 | 12750022 | + | BCL11A | chr2 | 60679801 | - |
intron-3CDS | ENST00000379329 | ENST00000359629 | PHACTR1 | chr6 | 12750022 | + | BCL11A | chr2 | 60679801 | - |
intron-3CDS | ENST00000379329 | ENST00000538214 | PHACTR1 | chr6 | 12750022 | + | BCL11A | chr2 | 60679801 | - |
intron-3CDS | ENST00000379329 | ENST00000537768 | PHACTR1 | chr6 | 12750022 | + | BCL11A | chr2 | 60679801 | - |
intron-intron | ENST00000379329 | ENST00000335712 | PHACTR1 | chr6 | 12750022 | + | BCL11A | chr2 | 60679801 | - |
intron-intron | ENST00000379329 | ENST00000477659 | PHACTR1 | chr6 | 12750022 | + | BCL11A | chr2 | 60679801 | - |
intron-intron | ENST00000379329 | ENST00000358510 | PHACTR1 | chr6 | 12750022 | + | BCL11A | chr2 | 60679801 | - |
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FusionProtFeatures for PHACTR1_BCL11A |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
PHACTR1 | BCL11A |
Binds actin monomers (G actin) and plays a role in thereorganization of the actin cytoskeleton and in formation of actinstress fibers. Plays a role in cell motility. Plays a role in theformation of tubules by endothelial cells. Regulates PPP1CAactivity. Required for normal cell survival.{ECO:0000269|PubMed:21798305, ECO:0000269|PubMed:21939755}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | >BCL11A | chr6:12750022 | chr2:60679801 | ENST00000335712 | - | 0 | 4 | 260_373 | -76 | 836 | Compositional bias | Note=Pro-rich |
Tgene | >BCL11A | chr6:12750022 | chr2:60679801 | ENST00000335712 | - | 0 | 4 | 481_509 | -76 | 836 | Compositional bias | Note=Glu-rich |
Tgene | >BCL11A | chr6:12750022 | chr2:60679801 | ENST00000358510 | - | 0 | 3 | 260_373 | -54 | 802 | Compositional bias | Note=Pro-rich |
Tgene | >BCL11A | chr6:12750022 | chr2:60679801 | ENST00000358510 | - | 0 | 3 | 481_509 | -54 | 802 | Compositional bias | Note=Glu-rich |
Tgene | >BCL11A | chr6:12750022 | chr2:60679801 | ENST00000359629 | - | 3 | 5 | 260_373 | 210 | 244 | Compositional bias | Note=Pro-rich |
Tgene | >BCL11A | chr6:12750022 | chr2:60679801 | ENST00000359629 | - | 3 | 5 | 481_509 | 210 | 244 | Compositional bias | Note=Glu-rich |
Tgene | >BCL11A | chr6:12750022 | chr2:60679801 | ENST00000335712 | - | 0 | 4 | 1_210 | -76 | 836 | Region | Required for nuclear body formation and for SUMO1 recruitment |
Tgene | >BCL11A | chr6:12750022 | chr2:60679801 | ENST00000358510 | - | 0 | 3 | 1_210 | -54 | 802 | Region | Required for nuclear body formation and for SUMO1 recruitment |
Tgene | >BCL11A | chr6:12750022 | chr2:60679801 | ENST00000335712 | - | 0 | 4 | 170_193 | -76 | 836 | Zinc finger | C2H2-type 1 |
Tgene | >BCL11A | chr6:12750022 | chr2:60679801 | ENST00000335712 | - | 0 | 4 | 377_399 | -76 | 836 | Zinc finger | C2H2-type 2 |
Tgene | >BCL11A | chr6:12750022 | chr2:60679801 | ENST00000335712 | - | 0 | 4 | 405_429 | -76 | 836 | Zinc finger | C2H2-type 3 |
Tgene | >BCL11A | chr6:12750022 | chr2:60679801 | ENST00000335712 | - | 0 | 4 | 742_764 | -76 | 836 | Zinc finger | C2H2-type 4 |
Tgene | >BCL11A | chr6:12750022 | chr2:60679801 | ENST00000335712 | - | 0 | 4 | 770_792 | -76 | 836 | Zinc finger | C2H2-type 5 |
Tgene | >BCL11A | chr6:12750022 | chr2:60679801 | ENST00000335712 | - | 0 | 4 | 800_823 | -76 | 836 | Zinc finger | C2H2-type 6 |
Tgene | >BCL11A | chr6:12750022 | chr2:60679801 | ENST00000356842 | - | 3 | 5 | 742_764 | 743 | 774 | Zinc finger | C2H2-type 4 |
Tgene | >BCL11A | chr6:12750022 | chr2:60679801 | ENST00000356842 | - | 3 | 5 | 770_792 | 743 | 774 | Zinc finger | C2H2-type 5 |
Tgene | >BCL11A | chr6:12750022 | chr2:60679801 | ENST00000356842 | - | 3 | 5 | 800_823 | 743 | 774 | Zinc finger | C2H2-type 6 |
Tgene | >BCL11A | chr6:12750022 | chr2:60679801 | ENST00000358510 | - | 0 | 3 | 170_193 | -54 | 802 | Zinc finger | C2H2-type 1 |
Tgene | >BCL11A | chr6:12750022 | chr2:60679801 | ENST00000358510 | - | 0 | 3 | 377_399 | -54 | 802 | Zinc finger | C2H2-type 2 |
Tgene | >BCL11A | chr6:12750022 | chr2:60679801 | ENST00000358510 | - | 0 | 3 | 405_429 | -54 | 802 | Zinc finger | C2H2-type 3 |
Tgene | >BCL11A | chr6:12750022 | chr2:60679801 | ENST00000358510 | - | 0 | 3 | 742_764 | -54 | 802 | Zinc finger | C2H2-type 4 |
Tgene | >BCL11A | chr6:12750022 | chr2:60679801 | ENST00000358510 | - | 0 | 3 | 770_792 | -54 | 802 | Zinc finger | C2H2-type 5 |
Tgene | >BCL11A | chr6:12750022 | chr2:60679801 | ENST00000358510 | - | 0 | 3 | 800_823 | -54 | 802 | Zinc finger | C2H2-type 6 |
Tgene | >BCL11A | chr6:12750022 | chr2:60679801 | ENST00000359629 | - | 3 | 5 | 377_399 | 210 | 244 | Zinc finger | C2H2-type 2 |
Tgene | >BCL11A | chr6:12750022 | chr2:60679801 | ENST00000359629 | - | 3 | 5 | 405_429 | 210 | 244 | Zinc finger | C2H2-type 3 |
Tgene | >BCL11A | chr6:12750022 | chr2:60679801 | ENST00000359629 | - | 3 | 5 | 742_764 | 210 | 244 | Zinc finger | C2H2-type 4 |
Tgene | >BCL11A | chr6:12750022 | chr2:60679801 | ENST00000359629 | - | 3 | 5 | 770_792 | 210 | 244 | Zinc finger | C2H2-type 5 |
Tgene | >BCL11A | chr6:12750022 | chr2:60679801 | ENST00000359629 | - | 3 | 5 | 800_823 | 210 | 244 | Zinc finger | C2H2-type 6 |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | >PHACTR1 | chr6:12750022 | chr2:60679801 | ENST00000379350 | + | 3 | 10 | 108_129 | 83 | 485 | Motif | Nuclear localization signal |
Hgene | >PHACTR1 | chr6:12750022 | chr2:60679801 | ENST00000379350 | + | 3 | 10 | 138_163 | 83 | 485 | Repeat | Note=RPEL 1 |
Hgene | >PHACTR1 | chr6:12750022 | chr2:60679801 | ENST00000379350 | + | 3 | 10 | 422_447 | 83 | 485 | Repeat | Note=RPEL 2 |
Hgene | >PHACTR1 | chr6:12750022 | chr2:60679801 | ENST00000379350 | + | 3 | 10 | 460_484 | 83 | 485 | Repeat | Note=RPEL 3 |
Hgene | >PHACTR1 | chr6:12750022 | chr2:60679801 | ENST00000379350 | + | 3 | 10 | 498_523 | 83 | 485 | Repeat | Note=RPEL 4 |
Tgene | BCL11A | chr6:12750022 | chr2:60679801 | ENST00000356842 | - | 3 | 5 | 260_373 | 743 | 774 | Compositional bias | Note=Pro-rich |
Tgene | BCL11A | chr6:12750022 | chr2:60679801 | ENST00000356842 | - | 3 | 5 | 481_509 | 743 | 774 | Compositional bias | Note=Glu-rich |
Tgene | BCL11A | chr6:12750022 | chr2:60679801 | ENST00000356842 | - | 3 | 5 | 1_210 | 743 | 774 | Region | Required for nuclear body formation and for SUMO1 recruitment |
Tgene | BCL11A | chr6:12750022 | chr2:60679801 | ENST00000359629 | - | 3 | 5 | 1_210 | 210 | 244 | Region | Required for nuclear body formation and for SUMO1 recruitment |
Tgene | BCL11A | chr6:12750022 | chr2:60679801 | ENST00000356842 | - | 3 | 5 | 170_193 | 743 | 774 | Zinc finger | C2H2-type 1 |
Tgene | BCL11A | chr6:12750022 | chr2:60679801 | ENST00000356842 | - | 3 | 5 | 377_399 | 743 | 774 | Zinc finger | C2H2-type 2 |
Tgene | BCL11A | chr6:12750022 | chr2:60679801 | ENST00000356842 | - | 3 | 5 | 405_429 | 743 | 774 | Zinc finger | C2H2-type 3 |
Tgene | BCL11A | chr6:12750022 | chr2:60679801 | ENST00000359629 | - | 3 | 5 | 170_193 | 210 | 244 | Zinc finger | C2H2-type 1 |
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FusionGeneSequence for PHACTR1_BCL11A |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_PHACTR1_ENST00000379350_chr6_12750022_+_BCL11A_ENST00000356842_chr2_60679801_-_114aa MDYPKMDYFLDVESAHRLLDVESAQRFFYSQGAQARRATLLLPPTLMAASSEDDIDRRPIRRVRSKSDTPYLAEARISFNLGAGSSHTPI >In-frame_PHACTR1_ENST00000379350_chr6_12750022_+_BCL11A_ENST00000359629_chr2_60679801_-_117aa MDYPKMDYFLDVESAHRLLDVESAQRFFYSQGAQARRATLLLPPTLMAASSEDDIDRRPIRRVRSKSDTPYLAEARISFNLGAGSSHTPI >In-frame_PHACTR1_ENST00000379350_chr6_12750022_+_BCL11A_ENST00000538214_chr2_60679801_-_117aa MDYPKMDYFLDVESAHRLLDVESAQRFFYSQGAQARRATLLLPPTLMAASSEDDIDRRPIRRVRSKSDTPYLAEARISFNLGAGSSHTPI >In-frame_PHACTR1_ENST00000379348_chr6_12750022_+_BCL11A_ENST00000356842_chr2_60679801_-_114aa MDYPKMDYFLDVESAHRLLDVESAQRFFYSQGAQARRATLLLPPTLMAASSEDDIDRRPIRRVRSKSDTPYLAEARISFNLGAGSSHTPI >In-frame_PHACTR1_ENST00000379348_chr6_12750022_+_BCL11A_ENST00000359629_chr2_60679801_-_117aa MDYPKMDYFLDVESAHRLLDVESAQRFFYSQGAQARRATLLLPPTLMAASSEDDIDRRPIRRVRSKSDTPYLAEARISFNLGAGSSHTPI >In-frame_PHACTR1_ENST00000379348_chr6_12750022_+_BCL11A_ENST00000538214_chr2_60679801_-_117aa MDYPKMDYFLDVESAHRLLDVESAQRFFYSQGAQARRATLLLPPTLMAASSEDDIDRRPIRRVRSKSDTPYLAEARISFNLGAGSSHTPI >In-frame_PHACTR1_ENST00000332995_chr6_12750022_+_BCL11A_ENST00000356842_chr2_60679801_-_114aa MDYPKMDYFLDVESAHRLLDVESAQRFFYSQGAQARRATLLLPPTLMAASSEDDIDRRPIRRVRSKSDTPYLAEARISFNLGAGSSHTPI >In-frame_PHACTR1_ENST00000332995_chr6_12750022_+_BCL11A_ENST00000359629_chr2_60679801_-_117aa MDYPKMDYFLDVESAHRLLDVESAQRFFYSQGAQARRATLLLPPTLMAASSEDDIDRRPIRRVRSKSDTPYLAEARISFNLGAGSSHTPI >In-frame_PHACTR1_ENST00000332995_chr6_12750022_+_BCL11A_ENST00000538214_chr2_60679801_-_117aa MDYPKMDYFLDVESAHRLLDVESAQRFFYSQGAQARRATLLLPPTLMAASSEDDIDRRPIRRVRSKSDTPYLAEARISFNLGAGSSHTPI |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_PHACTR1_ENST00000379350_chr6_12750022_+_BCL11A_ENST00000356842_chr2_60679801_-_342nt ATGGATTATCCCAAAATGGATTATTTTCTGGATGTAGAGTCTGCTCACAGACTCTTGGATGTTGAGTCAGCTCAAAGATTCTTCTACAGT CAAGGAGCTCAAGCTCGCCGGGCGACCCTGCTCCTGCCTCCCACATTAATGGCGGCATCCTCGGAGGATGATATAGACCGGCGGCCCATC CGGAGAGTGCGCTCCAAGAGCGACACGCCGTACCTCGCAGAGGCCAGGATCTCCTTTAACCTGGGGGCAGGTTCTTCACACACCCCCATT >In-frame_PHACTR1_ENST00000379350_chr6_12750022_+_BCL11A_ENST00000359629_chr2_60679801_-_352nt ATGGATTATCCCAAAATGGATTATTTTCTGGATGTAGAGTCTGCTCACAGACTCTTGGATGTTGAGTCAGCTCAAAGATTCTTCTACAGT CAAGGAGCTCAAGCTCGCCGGGCGACCCTGCTCCTGCCTCCCACATTAATGGCGGCATCCTCGGAGGATGATATAGACCGGCGGCCCATC CGGAGAGTGCGCTCCAAGAGCGACACGCCGTACCTCGCAGAGGCCAGGATCTCCTTTAACCTGGGGGCAGGTTCTTCACACACCCCCATT >In-frame_PHACTR1_ENST00000379350_chr6_12750022_+_BCL11A_ENST00000538214_chr2_60679801_-_352nt ATGGATTATCCCAAAATGGATTATTTTCTGGATGTAGAGTCTGCTCACAGACTCTTGGATGTTGAGTCAGCTCAAAGATTCTTCTACAGT CAAGGAGCTCAAGCTCGCCGGGCGACCCTGCTCCTGCCTCCCACATTAATGGCGGCATCCTCGGAGGATGATATAGACCGGCGGCCCATC CGGAGAGTGCGCTCCAAGAGCGACACGCCGTACCTCGCAGAGGCCAGGATCTCCTTTAACCTGGGGGCAGGTTCTTCACACACCCCCATT >In-frame_PHACTR1_ENST00000379348_chr6_12750022_+_BCL11A_ENST00000356842_chr2_60679801_-_342nt ATGGATTATCCCAAAATGGATTATTTTCTGGATGTAGAGTCTGCTCACAGACTCTTGGATGTTGAGTCAGCTCAAAGATTCTTCTACAGT CAAGGAGCTCAAGCTCGCCGGGCGACCCTGCTCCTGCCTCCCACATTAATGGCGGCATCCTCGGAGGATGATATAGACCGGCGGCCCATC CGGAGAGTGCGCTCCAAGAGCGACACGCCGTACCTCGCAGAGGCCAGGATCTCCTTTAACCTGGGGGCAGGTTCTTCACACACCCCCATT >In-frame_PHACTR1_ENST00000379348_chr6_12750022_+_BCL11A_ENST00000359629_chr2_60679801_-_352nt ATGGATTATCCCAAAATGGATTATTTTCTGGATGTAGAGTCTGCTCACAGACTCTTGGATGTTGAGTCAGCTCAAAGATTCTTCTACAGT CAAGGAGCTCAAGCTCGCCGGGCGACCCTGCTCCTGCCTCCCACATTAATGGCGGCATCCTCGGAGGATGATATAGACCGGCGGCCCATC CGGAGAGTGCGCTCCAAGAGCGACACGCCGTACCTCGCAGAGGCCAGGATCTCCTTTAACCTGGGGGCAGGTTCTTCACACACCCCCATT >In-frame_PHACTR1_ENST00000379348_chr6_12750022_+_BCL11A_ENST00000538214_chr2_60679801_-_352nt ATGGATTATCCCAAAATGGATTATTTTCTGGATGTAGAGTCTGCTCACAGACTCTTGGATGTTGAGTCAGCTCAAAGATTCTTCTACAGT CAAGGAGCTCAAGCTCGCCGGGCGACCCTGCTCCTGCCTCCCACATTAATGGCGGCATCCTCGGAGGATGATATAGACCGGCGGCCCATC CGGAGAGTGCGCTCCAAGAGCGACACGCCGTACCTCGCAGAGGCCAGGATCTCCTTTAACCTGGGGGCAGGTTCTTCACACACCCCCATT >In-frame_PHACTR1_ENST00000332995_chr6_12750022_+_BCL11A_ENST00000356842_chr2_60679801_-_342nt ATGGATTATCCCAAAATGGATTATTTTCTGGATGTAGAGTCTGCTCACAGACTCTTGGATGTTGAGTCAGCTCAAAGATTCTTCTACAGT CAAGGAGCTCAAGCTCGCCGGGCGACCCTGCTCCTGCCTCCCACATTAATGGCGGCATCCTCGGAGGATGATATAGACCGGCGGCCCATC CGGAGAGTGCGCTCCAAGAGCGACACGCCGTACCTCGCAGAGGCCAGGATCTCCTTTAACCTGGGGGCAGGTTCTTCACACACCCCCATT >In-frame_PHACTR1_ENST00000332995_chr6_12750022_+_BCL11A_ENST00000359629_chr2_60679801_-_352nt ATGGATTATCCCAAAATGGATTATTTTCTGGATGTAGAGTCTGCTCACAGACTCTTGGATGTTGAGTCAGCTCAAAGATTCTTCTACAGT CAAGGAGCTCAAGCTCGCCGGGCGACCCTGCTCCTGCCTCCCACATTAATGGCGGCATCCTCGGAGGATGATATAGACCGGCGGCCCATC CGGAGAGTGCGCTCCAAGAGCGACACGCCGTACCTCGCAGAGGCCAGGATCTCCTTTAACCTGGGGGCAGGTTCTTCACACACCCCCATT >In-frame_PHACTR1_ENST00000332995_chr6_12750022_+_BCL11A_ENST00000538214_chr2_60679801_-_352nt ATGGATTATCCCAAAATGGATTATTTTCTGGATGTAGAGTCTGCTCACAGACTCTTGGATGTTGAGTCAGCTCAAAGATTCTTCTACAGT CAAGGAGCTCAAGCTCGCCGGGCGACCCTGCTCCTGCCTCCCACATTAATGGCGGCATCCTCGGAGGATGATATAGACCGGCGGCCCATC CGGAGAGTGCGCTCCAAGAGCGACACGCCGTACCTCGCAGAGGCCAGGATCTCCTTTAACCTGGGGGCAGGTTCTTCACACACCCCCATT |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_PHACTR1_ENST00000379350_chr6_12750022_+_BCL11A_ENST00000356842_chr2_60679801_-_1879nt TATTTAGCAAGATCAAAGACACTCTGGCTGGAACGGCTCTTGTTTTACCGCTGACAGATAGCCTTTGATTTTTATTTTTTGCAGTGTTCC AGTGTTTTCTCTCAAAACTCTGTGTTTGGAACATCAAGGATGGATTATCCCAAAATGGATTATTTTCTGGATGTAGAGTCTGCTCACAGA CTCTTGGATGTTGAGTCAGCTCAAAGATTCTTCTACAGTCAAGGAGCTCAAGCTCGCCGGGCGACCCTGCTCCTGCCTCCCACATTAATG GCGGCATCCTCGGAGGATGATATAGACCGGCGGCCCATCCGGAGAGTGCGCTCCAAGAGCGACACGCCGTACCTCGCAGAGGCCAGGATC TCCTTTAACCTGGGGGCAGGTTCTTCACACACCCCCATTCGGCGTAGTACCCAGAGAGCTCAAGATGTGTGGCAGTTTTCGGATGGAAGC TCGAGAGCCCTTAAGTTCTGAGAAAATTTGAAGCCCCCAGGGGTGGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCATC CTGCTAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAGGCCTGC AGCGCCATTTTATTTATATTTTTTAATAAAAAGTAAAAACAAAAAAACAGACCCACATTGGAACAGTGAATCAGTCCCATAGAGAGGGCC CGTGGACCATCGCTGTCATGAGTGATGCCCTGGCCCTTCTGAAACCAGCCAACCTAATTACCTGTATTGTGGAAATGCGCATGAGTCCCC AACCCCTTGTTTCTATACATTCTATGTTGTCTTTTAAAAAGTGTGCTTAACATTGACACAATAAATGTTGGAGCTTTAGGTGGTGTTTGC TTGTTCTTTAATTTTTAATGCTTATAAGACAATGAGGCTGCTTATGATTTTGTACTTCTGTACCTGTTTCCTACAGACACCCATCGGGTG GGTAGGAGGAACAGATTTGAGAAATGGGCAGGAGATGTAGGAGGGGAACTAGGTTACCGCTTATCAGATGGCATAAATTTTCAAGGAGAA TCAAAATGCAAAACTTGGGAATAAATCATAGCAATATCATAATTAATGTAGTAGTAATATTGCTGTTTATTAATGCTGAAGTGTGGTTTT CCTAACTGTCTGACTTATAATTTGCATACCATTAAATAATGCATAATATGGCACGCCGAATCCTGTTTTTCAAATATATGCTTTTGGTGG CTACCATGCAGGATTTGAATTTGTCTTTTAATTTAGCTTAGGAAAGAACATCACTGGGCGAGCGGTAAATCCTAAAGAAGGTGATAAATG TCAGTAGTTTCTTATTAAATATTCTAATTTTAGGTTCCCAAACCTTCAGGAAATATATCTTAATGCAGACAAACAAACATAAAACTTCTT TAGTACTTACATCAGGAAATTTGGGGCAGATTTTAGAGGGGGGAAATTATAGGAGGAAAGAAGTTCACATCAGAACAGACAATCACAGCA ATGCTCTATTCCTTAGAAATTAGTGCCACAAATAAGTTACATCTACAAACAGGTGGTAAAAATTCTTTCTGGCCCAGTTAATTTGCACAG AACTTTTCTCAGTTTGGTATTTTTTACTGCTTGGAGATCCAGAAGAGAATTAGAAACAACATAGCAAATTAAAATAGGTTTGTCAATAAT AGAGCTCAGACACCTGTGTGCTGTAGATTCACATACAGGCCGTGAACCTAAGTGGGGAAAATCCTACCTATCCACCTTCTGGCTAGATTA >In-frame_PHACTR1_ENST00000379350_chr6_12750022_+_BCL11A_ENST00000359629_chr2_60679801_-_1879nt TATTTAGCAAGATCAAAGACACTCTGGCTGGAACGGCTCTTGTTTTACCGCTGACAGATAGCCTTTGATTTTTATTTTTTGCAGTGTTCC AGTGTTTTCTCTCAAAACTCTGTGTTTGGAACATCAAGGATGGATTATCCCAAAATGGATTATTTTCTGGATGTAGAGTCTGCTCACAGA CTCTTGGATGTTGAGTCAGCTCAAAGATTCTTCTACAGTCAAGGAGCTCAAGCTCGCCGGGCGACCCTGCTCCTGCCTCCCACATTAATG GCGGCATCCTCGGAGGATGATATAGACCGGCGGCCCATCCGGAGAGTGCGCTCCAAGAGCGACACGCCGTACCTCGCAGAGGCCAGGATC TCCTTTAACCTGGGGGCAGGTTCTTCACACACCCCCATTCGGCGTAGTACCCAGAGAGCTCAAGATGTGTGGCAGTTTTCGGATGGAAGC TCGAGAGCCCTTAAGTTCTGAGAAAATTTGAAGCCCCCAGGGGTGGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCATC CTGCTAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAGGCCTGC AGCGCCATTTTATTTATATTTTTTAATAAAAAGTAAAAACAAAAAAACAGACCCACATTGGAACAGTGAATCAGTCCCATAGAGAGGGCC CGTGGACCATCGCTGTCATGAGTGATGCCCTGGCCCTTCTGAAACCAGCCAACCTAATTACCTGTATTGTGGAAATGCGCATGAGTCCCC AACCCCTTGTTTCTATACATTCTATGTTGTCTTTTAAAAAGTGTGCTTAACATTGACACAATAAATGTTGGAGCTTTAGGTGGTGTTTGC TTGTTCTTTAATTTTTAATGCTTATAAGACAATGAGGCTGCTTATGATTTTGTACTTCTGTACCTGTTTCCTACAGACACCCATCGGGTG GGTAGGAGGAACAGATTTGAGAAATGGGCAGGAGATGTAGGAGGGGAACTAGGTTACCGCTTATCAGATGGCATAAATTTTCAAGGAGAA TCAAAATGCAAAACTTGGGAATAAATCATAGCAATATCATAATTAATGTAGTAGTAATATTGCTGTTTATTAATGCTGAAGTGTGGTTTT CCTAACTGTCTGACTTATAATTTGCATACCATTAAATAATGCATAATATGGCACGCCGAATCCTGTTTTTCAAATATATGCTTTTGGTGG CTACCATGCAGGATTTGAATTTGTCTTTTAATTTAGCTTAGGAAAGAACATCACTGGGCGAGCGGTAAATCCTAAAGAAGGTGATAAATG TCAGTAGTTTCTTATTAAATATTCTAATTTTAGGTTCCCAAACCTTCAGGAAATATATCTTAATGCAGACAAACAAACATAAAACTTCTT TAGTACTTACATCAGGAAATTTGGGGCAGATTTTAGAGGGGGGAAATTATAGGAGGAAAGAAGTTCACATCAGAACAGACAATCACAGCA ATGCTCTATTCCTTAGAAATTAGTGCCACAAATAAGTTACATCTACAAACAGGTGGTAAAAATTCTTTCTGGCCCAGTTAATTTGCACAG AACTTTTCTCAGTTTGGTATTTTTTACTGCTTGGAGATCCAGAAGAGAATTAGAAACAACATAGCAAATTAAAATAGGTTTGTCAATAAT AGAGCTCAGACACCTGTGTGCTGTAGATTCACATACAGGCCGTGAACCTAAGTGGGGAAAATCCTACCTATCCACCTTCTGGCTAGATTA >In-frame_PHACTR1_ENST00000379350_chr6_12750022_+_BCL11A_ENST00000538214_chr2_60679801_-_624nt TATTTAGCAAGATCAAAGACACTCTGGCTGGAACGGCTCTTGTTTTACCGCTGACAGATAGCCTTTGATTTTTATTTTTTGCAGTGTTCC AGTGTTTTCTCTCAAAACTCTGTGTTTGGAACATCAAGGATGGATTATCCCAAAATGGATTATTTTCTGGATGTAGAGTCTGCTCACAGA CTCTTGGATGTTGAGTCAGCTCAAAGATTCTTCTACAGTCAAGGAGCTCAAGCTCGCCGGGCGACCCTGCTCCTGCCTCCCACATTAATG GCGGCATCCTCGGAGGATGATATAGACCGGCGGCCCATCCGGAGAGTGCGCTCCAAGAGCGACACGCCGTACCTCGCAGAGGCCAGGATC TCCTTTAACCTGGGGGCAGGTTCTTCACACACCCCCATTCGGCGTAGTACCCAGAGAGCTCAAGATGTGTGGCAGTTTTCGGATGGAAGC TCGAGAGCCCTTAAGTTCTGAGAAAATTTGAAGCCCCCAGGGGTGGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCATC >In-frame_PHACTR1_ENST00000379348_chr6_12750022_+_BCL11A_ENST00000356842_chr2_60679801_-_1927nt GATGAGCTGAGGATCAACACTCACAACGGCTGACACTTAATGACGCTATTTATCAAATAGACCTTTTGAAAACTGATAGCATGTGAATTT AACAGTATATGTTCCAGAGAATATAAAGCAAGGAAAGGCTGGTGTTCCAGTGTTTTCTCTCAAAACTCTGTGTTTGGAACATCAAGGATG GATTATCCCAAAATGGATTATTTTCTGGATGTAGAGTCTGCTCACAGACTCTTGGATGTTGAGTCAGCTCAAAGATTCTTCTACAGTCAA GGAGCTCAAGCTCGCCGGGCGACCCTGCTCCTGCCTCCCACATTAATGGCGGCATCCTCGGAGGATGATATAGACCGGCGGCCCATCCGG AGAGTGCGCTCCAAGAGCGACACGCCGTACCTCGCAGAGGCCAGGATCTCCTTTAACCTGGGGGCAGGTTCTTCACACACCCCCATTCGG CGTAGTACCCAGAGAGCTCAAGATGTGTGGCAGTTTTCGGATGGAAGCTCGAGAGCCCTTAAGTTCTGAGAAAATTTGAAGCCCCCAGGG GTGGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCATCCTGCTAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGC CGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAGGCCTGCAGCGCCATTTTATTTATATTTTTTAATAAAAAGTAAAAACAA AAAAACAGACCCACATTGGAACAGTGAATCAGTCCCATAGAGAGGGCCCGTGGACCATCGCTGTCATGAGTGATGCCCTGGCCCTTCTGA AACCAGCCAACCTAATTACCTGTATTGTGGAAATGCGCATGAGTCCCCAACCCCTTGTTTCTATACATTCTATGTTGTCTTTTAAAAAGT GTGCTTAACATTGACACAATAAATGTTGGAGCTTTAGGTGGTGTTTGCTTGTTCTTTAATTTTTAATGCTTATAAGACAATGAGGCTGCT TATGATTTTGTACTTCTGTACCTGTTTCCTACAGACACCCATCGGGTGGGTAGGAGGAACAGATTTGAGAAATGGGCAGGAGATGTAGGA GGGGAACTAGGTTACCGCTTATCAGATGGCATAAATTTTCAAGGAGAATCAAAATGCAAAACTTGGGAATAAATCATAGCAATATCATAA TTAATGTAGTAGTAATATTGCTGTTTATTAATGCTGAAGTGTGGTTTTCCTAACTGTCTGACTTATAATTTGCATACCATTAAATAATGC ATAATATGGCACGCCGAATCCTGTTTTTCAAATATATGCTTTTGGTGGCTACCATGCAGGATTTGAATTTGTCTTTTAATTTAGCTTAGG AAAGAACATCACTGGGCGAGCGGTAAATCCTAAAGAAGGTGATAAATGTCAGTAGTTTCTTATTAAATATTCTAATTTTAGGTTCCCAAA CCTTCAGGAAATATATCTTAATGCAGACAAACAAACATAAAACTTCTTTAGTACTTACATCAGGAAATTTGGGGCAGATTTTAGAGGGGG GAAATTATAGGAGGAAAGAAGTTCACATCAGAACAGACAATCACAGCAATGCTCTATTCCTTAGAAATTAGTGCCACAAATAAGTTACAT CTACAAACAGGTGGTAAAAATTCTTTCTGGCCCAGTTAATTTGCACAGAACTTTTCTCAGTTTGGTATTTTTTACTGCTTGGAGATCCAG AAGAGAATTAGAAACAACATAGCAAATTAAAATAGGTTTGTCAATAATAGAGCTCAGACACCTGTGTGCTGTAGATTCACATACAGGCCG TGAACCTAAGTGGGGAAAATCCTACCTATCCACCTTCTGGCTAGATTACCTAGCTTAGTGAAAAGATAGCCAAATAATTGGCATGTGAAT >In-frame_PHACTR1_ENST00000379348_chr6_12750022_+_BCL11A_ENST00000359629_chr2_60679801_-_1927nt GATGAGCTGAGGATCAACACTCACAACGGCTGACACTTAATGACGCTATTTATCAAATAGACCTTTTGAAAACTGATAGCATGTGAATTT AACAGTATATGTTCCAGAGAATATAAAGCAAGGAAAGGCTGGTGTTCCAGTGTTTTCTCTCAAAACTCTGTGTTTGGAACATCAAGGATG GATTATCCCAAAATGGATTATTTTCTGGATGTAGAGTCTGCTCACAGACTCTTGGATGTTGAGTCAGCTCAAAGATTCTTCTACAGTCAA GGAGCTCAAGCTCGCCGGGCGACCCTGCTCCTGCCTCCCACATTAATGGCGGCATCCTCGGAGGATGATATAGACCGGCGGCCCATCCGG AGAGTGCGCTCCAAGAGCGACACGCCGTACCTCGCAGAGGCCAGGATCTCCTTTAACCTGGGGGCAGGTTCTTCACACACCCCCATTCGG CGTAGTACCCAGAGAGCTCAAGATGTGTGGCAGTTTTCGGATGGAAGCTCGAGAGCCCTTAAGTTCTGAGAAAATTTGAAGCCCCCAGGG GTGGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCATCCTGCTAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGC CGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAGGCCTGCAGCGCCATTTTATTTATATTTTTTAATAAAAAGTAAAAACAA AAAAACAGACCCACATTGGAACAGTGAATCAGTCCCATAGAGAGGGCCCGTGGACCATCGCTGTCATGAGTGATGCCCTGGCCCTTCTGA AACCAGCCAACCTAATTACCTGTATTGTGGAAATGCGCATGAGTCCCCAACCCCTTGTTTCTATACATTCTATGTTGTCTTTTAAAAAGT GTGCTTAACATTGACACAATAAATGTTGGAGCTTTAGGTGGTGTTTGCTTGTTCTTTAATTTTTAATGCTTATAAGACAATGAGGCTGCT TATGATTTTGTACTTCTGTACCTGTTTCCTACAGACACCCATCGGGTGGGTAGGAGGAACAGATTTGAGAAATGGGCAGGAGATGTAGGA GGGGAACTAGGTTACCGCTTATCAGATGGCATAAATTTTCAAGGAGAATCAAAATGCAAAACTTGGGAATAAATCATAGCAATATCATAA TTAATGTAGTAGTAATATTGCTGTTTATTAATGCTGAAGTGTGGTTTTCCTAACTGTCTGACTTATAATTTGCATACCATTAAATAATGC ATAATATGGCACGCCGAATCCTGTTTTTCAAATATATGCTTTTGGTGGCTACCATGCAGGATTTGAATTTGTCTTTTAATTTAGCTTAGG AAAGAACATCACTGGGCGAGCGGTAAATCCTAAAGAAGGTGATAAATGTCAGTAGTTTCTTATTAAATATTCTAATTTTAGGTTCCCAAA CCTTCAGGAAATATATCTTAATGCAGACAAACAAACATAAAACTTCTTTAGTACTTACATCAGGAAATTTGGGGCAGATTTTAGAGGGGG GAAATTATAGGAGGAAAGAAGTTCACATCAGAACAGACAATCACAGCAATGCTCTATTCCTTAGAAATTAGTGCCACAAATAAGTTACAT CTACAAACAGGTGGTAAAAATTCTTTCTGGCCCAGTTAATTTGCACAGAACTTTTCTCAGTTTGGTATTTTTTACTGCTTGGAGATCCAG AAGAGAATTAGAAACAACATAGCAAATTAAAATAGGTTTGTCAATAATAGAGCTCAGACACCTGTGTGCTGTAGATTCACATACAGGCCG TGAACCTAAGTGGGGAAAATCCTACCTATCCACCTTCTGGCTAGATTACCTAGCTTAGTGAAAAGATAGCCAAATAATTGGCATGTGAAT >In-frame_PHACTR1_ENST00000379348_chr6_12750022_+_BCL11A_ENST00000538214_chr2_60679801_-_672nt GATGAGCTGAGGATCAACACTCACAACGGCTGACACTTAATGACGCTATTTATCAAATAGACCTTTTGAAAACTGATAGCATGTGAATTT AACAGTATATGTTCCAGAGAATATAAAGCAAGGAAAGGCTGGTGTTCCAGTGTTTTCTCTCAAAACTCTGTGTTTGGAACATCAAGGATG GATTATCCCAAAATGGATTATTTTCTGGATGTAGAGTCTGCTCACAGACTCTTGGATGTTGAGTCAGCTCAAAGATTCTTCTACAGTCAA GGAGCTCAAGCTCGCCGGGCGACCCTGCTCCTGCCTCCCACATTAATGGCGGCATCCTCGGAGGATGATATAGACCGGCGGCCCATCCGG AGAGTGCGCTCCAAGAGCGACACGCCGTACCTCGCAGAGGCCAGGATCTCCTTTAACCTGGGGGCAGGTTCTTCACACACCCCCATTCGG CGTAGTACCCAGAGAGCTCAAGATGTGTGGCAGTTTTCGGATGGAAGCTCGAGAGCCCTTAAGTTCTGAGAAAATTTGAAGCCCCCAGGG GTGGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCATCCTGCTAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGC >In-frame_PHACTR1_ENST00000332995_chr6_12750022_+_BCL11A_ENST00000356842_chr2_60679801_-_1750nt ATGGATTATCCCAAAATGGATTATTTTCTGGATGTAGAGTCTGCTCACAGACTCTTGGATGTTGAGTCAGCTCAAAGATTCTTCTACAGT CAAGGAGCTCAAGCTCGCCGGGCGACCCTGCTCCTGCCTCCCACATTAATGGCGGCATCCTCGGAGGATGATATAGACCGGCGGCCCATC CGGAGAGTGCGCTCCAAGAGCGACACGCCGTACCTCGCAGAGGCCAGGATCTCCTTTAACCTGGGGGCAGGTTCTTCACACACCCCCATT CGGCGTAGTACCCAGAGAGCTCAAGATGTGTGGCAGTTTTCGGATGGAAGCTCGAGAGCCCTTAAGTTCTGAGAAAATTTGAAGCCCCCA GGGGTGGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCATCCTGCTAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGA AGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAGGCCTGCAGCGCCATTTTATTTATATTTTTTAATAAAAAGTAAAAA CAAAAAAACAGACCCACATTGGAACAGTGAATCAGTCCCATAGAGAGGGCCCGTGGACCATCGCTGTCATGAGTGATGCCCTGGCCCTTC TGAAACCAGCCAACCTAATTACCTGTATTGTGGAAATGCGCATGAGTCCCCAACCCCTTGTTTCTATACATTCTATGTTGTCTTTTAAAA AGTGTGCTTAACATTGACACAATAAATGTTGGAGCTTTAGGTGGTGTTTGCTTGTTCTTTAATTTTTAATGCTTATAAGACAATGAGGCT GCTTATGATTTTGTACTTCTGTACCTGTTTCCTACAGACACCCATCGGGTGGGTAGGAGGAACAGATTTGAGAAATGGGCAGGAGATGTA GGAGGGGAACTAGGTTACCGCTTATCAGATGGCATAAATTTTCAAGGAGAATCAAAATGCAAAACTTGGGAATAAATCATAGCAATATCA TAATTAATGTAGTAGTAATATTGCTGTTTATTAATGCTGAAGTGTGGTTTTCCTAACTGTCTGACTTATAATTTGCATACCATTAAATAA TGCATAATATGGCACGCCGAATCCTGTTTTTCAAATATATGCTTTTGGTGGCTACCATGCAGGATTTGAATTTGTCTTTTAATTTAGCTT AGGAAAGAACATCACTGGGCGAGCGGTAAATCCTAAAGAAGGTGATAAATGTCAGTAGTTTCTTATTAAATATTCTAATTTTAGGTTCCC AAACCTTCAGGAAATATATCTTAATGCAGACAAACAAACATAAAACTTCTTTAGTACTTACATCAGGAAATTTGGGGCAGATTTTAGAGG GGGGAAATTATAGGAGGAAAGAAGTTCACATCAGAACAGACAATCACAGCAATGCTCTATTCCTTAGAAATTAGTGCCACAAATAAGTTA CATCTACAAACAGGTGGTAAAAATTCTTTCTGGCCCAGTTAATTTGCACAGAACTTTTCTCAGTTTGGTATTTTTTACTGCTTGGAGATC CAGAAGAGAATTAGAAACAACATAGCAAATTAAAATAGGTTTGTCAATAATAGAGCTCAGACACCTGTGTGCTGTAGATTCACATACAGG CCGTGAACCTAAGTGGGGAAAATCCTACCTATCCACCTTCTGGCTAGATTACCTAGCTTAGTGAAAAGATAGCCAAATAATTGGCATGTG >In-frame_PHACTR1_ENST00000332995_chr6_12750022_+_BCL11A_ENST00000359629_chr2_60679801_-_1750nt ATGGATTATCCCAAAATGGATTATTTTCTGGATGTAGAGTCTGCTCACAGACTCTTGGATGTTGAGTCAGCTCAAAGATTCTTCTACAGT CAAGGAGCTCAAGCTCGCCGGGCGACCCTGCTCCTGCCTCCCACATTAATGGCGGCATCCTCGGAGGATGATATAGACCGGCGGCCCATC CGGAGAGTGCGCTCCAAGAGCGACACGCCGTACCTCGCAGAGGCCAGGATCTCCTTTAACCTGGGGGCAGGTTCTTCACACACCCCCATT CGGCGTAGTACCCAGAGAGCTCAAGATGTGTGGCAGTTTTCGGATGGAAGCTCGAGAGCCCTTAAGTTCTGAGAAAATTTGAAGCCCCCA GGGGTGGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCATCCTGCTAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGA AGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAGGCCTGCAGCGCCATTTTATTTATATTTTTTAATAAAAAGTAAAAA CAAAAAAACAGACCCACATTGGAACAGTGAATCAGTCCCATAGAGAGGGCCCGTGGACCATCGCTGTCATGAGTGATGCCCTGGCCCTTC TGAAACCAGCCAACCTAATTACCTGTATTGTGGAAATGCGCATGAGTCCCCAACCCCTTGTTTCTATACATTCTATGTTGTCTTTTAAAA AGTGTGCTTAACATTGACACAATAAATGTTGGAGCTTTAGGTGGTGTTTGCTTGTTCTTTAATTTTTAATGCTTATAAGACAATGAGGCT GCTTATGATTTTGTACTTCTGTACCTGTTTCCTACAGACACCCATCGGGTGGGTAGGAGGAACAGATTTGAGAAATGGGCAGGAGATGTA GGAGGGGAACTAGGTTACCGCTTATCAGATGGCATAAATTTTCAAGGAGAATCAAAATGCAAAACTTGGGAATAAATCATAGCAATATCA TAATTAATGTAGTAGTAATATTGCTGTTTATTAATGCTGAAGTGTGGTTTTCCTAACTGTCTGACTTATAATTTGCATACCATTAAATAA TGCATAATATGGCACGCCGAATCCTGTTTTTCAAATATATGCTTTTGGTGGCTACCATGCAGGATTTGAATTTGTCTTTTAATTTAGCTT AGGAAAGAACATCACTGGGCGAGCGGTAAATCCTAAAGAAGGTGATAAATGTCAGTAGTTTCTTATTAAATATTCTAATTTTAGGTTCCC AAACCTTCAGGAAATATATCTTAATGCAGACAAACAAACATAAAACTTCTTTAGTACTTACATCAGGAAATTTGGGGCAGATTTTAGAGG GGGGAAATTATAGGAGGAAAGAAGTTCACATCAGAACAGACAATCACAGCAATGCTCTATTCCTTAGAAATTAGTGCCACAAATAAGTTA CATCTACAAACAGGTGGTAAAAATTCTTTCTGGCCCAGTTAATTTGCACAGAACTTTTCTCAGTTTGGTATTTTTTACTGCTTGGAGATC CAGAAGAGAATTAGAAACAACATAGCAAATTAAAATAGGTTTGTCAATAATAGAGCTCAGACACCTGTGTGCTGTAGATTCACATACAGG CCGTGAACCTAAGTGGGGAAAATCCTACCTATCCACCTTCTGGCTAGATTACCTAGCTTAGTGAAAAGATAGCCAAATAATTGGCATGTG >In-frame_PHACTR1_ENST00000332995_chr6_12750022_+_BCL11A_ENST00000538214_chr2_60679801_-_495nt ATGGATTATCCCAAAATGGATTATTTTCTGGATGTAGAGTCTGCTCACAGACTCTTGGATGTTGAGTCAGCTCAAAGATTCTTCTACAGT CAAGGAGCTCAAGCTCGCCGGGCGACCCTGCTCCTGCCTCCCACATTAATGGCGGCATCCTCGGAGGATGATATAGACCGGCGGCCCATC CGGAGAGTGCGCTCCAAGAGCGACACGCCGTACCTCGCAGAGGCCAGGATCTCCTTTAACCTGGGGGCAGGTTCTTCACACACCCCCATT CGGCGTAGTACCCAGAGAGCTCAAGATGTGTGGCAGTTTTCGGATGGAAGCTCGAGAGCCCTTAAGTTCTGAGAAAATTTGAAGCCCCCA GGGGTGGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCATCCTGCTAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGA |
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FusionGenePPI for PHACTR1_BCL11A |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
PHACTR1 | ACTA1, PPP1CA, TRIM25 | BCL11A | NR2F1, CHD4, MTA2, MTA1, HDAC1, MBD3, SIRT1, BCL6, BCL11A, APP, CDK4, CDK6, HDAC2, YME1L1, CDCA3, ACTC1, NR2F2, NR2E1, NR2E3, NR2F6, LMO1, NCK2, ZBTB24, GMCL1P1, UBE2I, PIAS3, PHF20L1, RBBP7, UBXN4, MBD3L1, FGFR2 |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for PHACTR1_BCL11A |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for PHACTR1_BCL11A |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | PHACTR1 | C1956346 | Coronary Artery Disease | 3 | CTD_human |
Hgene | PHACTR1 | C0027051 | Myocardial Infarction | 2 | CTD_human |
Hgene | PHACTR1 | C0338480 | Common Migraine | 1 | CTD_human |
Tgene | BCL11A | C0003635 | Apraxias | 1 | CTD_human |
Tgene | BCL11A | C0010606 | Adenoid Cystic Carcinoma | 1 | CTD_human |
Tgene | BCL11A | C0023014 | Language Development Disorders | 1 | CTD_human |
Tgene | BCL11A | C0032460 | Polycystic Ovary Syndrome | 1 | CTD_human |
Tgene | BCL11A | C0036095 | Salivary Gland Neoplasms | 1 | CTD_human |
Tgene | BCL11A | C0036341 | Schizophrenia | 1 | PSYGENET |