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Fusion gene ID: 26200 |
FusionGeneSummary for PCDHA11_ANKHD1 |
Fusion gene summary |
Fusion gene information | Fusion gene name: PCDHA11_ANKHD1 | Fusion gene ID: 26200 | Hgene | Tgene | Gene symbol | PCDHA11 | ANKHD1 | Gene ID | 56138 | 54882 |
Gene name | protocadherin alpha 11 | ankyrin repeat and KH domain containing 1 | |
Synonyms | CNR7|CNRN7|CNRS7|CRNR7|PCDH-ALPHA11 | MASK|MASK1|PP2500|VBARP | |
Cytomap | 5q31.3 | 5q31.3 | |
Type of gene | protein-coding | protein-coding | |
Description | protocadherin alpha-11KIAA0345-like 3 | ankyrin repeat and KH domain-containing protein 1HIV-1 Vpr-binding ankyrin repeat proteinmultiple ankyrin repeats, single KH-domain homolog | |
Modification date | 20180523 | 20180523 | |
UniProtAcc | Q9Y5I1 | Q8IWZ3 | |
Ensembl transtripts involved in fusion gene | ENST00000398640, | ENST00000360839, ENST00000297183, ENST00000394723, ENST00000394722, ENST00000462121, ENST00000544120, | |
Fusion gene scores | * DoF score | 1 X 1 X 1=1 | 8 X 11 X 3=264 |
# samples | 1 | 11 | |
** MAII score | log2(1/1*10)=3.32192809488736 | log2(11/264*10)=-1.26303440583379 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: PCDHA11 [Title/Abstract] AND ANKHD1 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | RV | BRCA | TCGA-D8-A13Z-01A | PCDHA11 | chr5 | 140251079 | + | ANKHD1 | chr5 | 139892948 | + |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000398640 | ENST00000360839 | PCDHA11 | chr5 | 140251079 | + | ANKHD1 | chr5 | 139892948 | + |
In-frame | ENST00000398640 | ENST00000297183 | PCDHA11 | chr5 | 140251079 | + | ANKHD1 | chr5 | 139892948 | + |
5CDS-intron | ENST00000398640 | ENST00000394723 | PCDHA11 | chr5 | 140251079 | + | ANKHD1 | chr5 | 139892948 | + |
5CDS-intron | ENST00000398640 | ENST00000394722 | PCDHA11 | chr5 | 140251079 | + | ANKHD1 | chr5 | 139892948 | + |
5CDS-intron | ENST00000398640 | ENST00000462121 | PCDHA11 | chr5 | 140251079 | + | ANKHD1 | chr5 | 139892948 | + |
5CDS-intron | ENST00000398640 | ENST00000544120 | PCDHA11 | chr5 | 140251079 | + | ANKHD1 | chr5 | 139892948 | + |
Top |
FusionProtFeatures for PCDHA11_ANKHD1 |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
PCDHA11 | ANKHD1 |
Potential calcium-dependent cell-adhesion protein. Maybe involved in the establishment and maintenance of specificneuronal connections in the brain. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | PCDHA11 | chr5:140251079 | chr5:139892948 | ENST00000398640 | + | 1 | 4 | 157_242 | 797 | 950 | Domain | Cadherin 2 |
Hgene | PCDHA11 | chr5:140251079 | chr5:139892948 | ENST00000398640 | + | 1 | 4 | 243_349 | 797 | 950 | Domain | Cadherin 3 |
Hgene | PCDHA11 | chr5:140251079 | chr5:139892948 | ENST00000398640 | + | 1 | 4 | 30_133 | 797 | 950 | Domain | Cadherin 1 |
Hgene | PCDHA11 | chr5:140251079 | chr5:139892948 | ENST00000398640 | + | 1 | 4 | 350_454 | 797 | 950 | Domain | Cadherin 4 |
Hgene | PCDHA11 | chr5:140251079 | chr5:139892948 | ENST00000398640 | + | 1 | 4 | 455_564 | 797 | 950 | Domain | Cadherin 5 |
Hgene | PCDHA11 | chr5:140251079 | chr5:139892948 | ENST00000398640 | + | 1 | 4 | 580_677 | 797 | 950 | Domain | Cadherin 6 |
Hgene | PCDHA11 | chr5:140251079 | chr5:139892948 | ENST00000398640 | + | 1 | 4 | 733_736 | 797 | 950 | Repeat | Note=PXXP 1 |
Hgene | PCDHA11 | chr5:140251079 | chr5:139892948 | ENST00000398640 | + | 1 | 4 | 773_776 | 797 | 950 | Repeat | Note=PXXP 2 |
Hgene | PCDHA11 | chr5:140251079 | chr5:139892948 | ENST00000398640 | + | 1 | 4 | 795_798 | 797 | 950 | Repeat | Note=PXXP 3 |
Hgene | PCDHA11 | chr5:140251079 | chr5:139892948 | ENST00000398640 | + | 1 | 4 | 30_696 | 797 | 950 | Topological domain | Extracellular |
Hgene | PCDHA11 | chr5:140251079 | chr5:139892948 | ENST00000398640 | + | 1 | 4 | 697_717 | 797 | 950 | Transmembrane | Helical |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000297183 | + | 22 | 36 | 1415_1485 | 1400 | 2618 | Coiled coil | Ontology_term=ECO:0000255 |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000360839 | + | 22 | 34 | 1415_1485 | 1400 | 2543 | Coiled coil | Ontology_term=ECO:0000255 |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000394722 | + | 0 | 11 | 1415_1485 | -16 | 617 | Coiled coil | Ontology_term=ECO:0000255 |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000394722 | + | 0 | 11 | 775_852 | -16 | 617 | Coiled coil | Ontology_term=ECO:0000255 |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000394723 | + | 0 | 11 | 1415_1485 | -38 | 628 | Coiled coil | Ontology_term=ECO:0000255 |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000394723 | + | 0 | 11 | 775_852 | -38 | 628 | Coiled coil | Ontology_term=ECO:0000255 |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000297183 | + | 22 | 36 | 1977_2100 | 1400 | 2618 | Compositional bias | Note=Ser-rich |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000297183 | + | 22 | 36 | 2291_2299 | 1400 | 2618 | Compositional bias | Note=Poly-Ser |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000360839 | + | 22 | 34 | 1977_2100 | 1400 | 2543 | Compositional bias | Note=Ser-rich |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000360839 | + | 22 | 34 | 2291_2299 | 1400 | 2543 | Compositional bias | Note=Poly-Ser |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000394722 | + | 0 | 11 | 1977_2100 | -16 | 617 | Compositional bias | Note=Ser-rich |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000394722 | + | 0 | 11 | 2291_2299 | -16 | 617 | Compositional bias | Note=Poly-Ser |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000394722 | + | 0 | 11 | 6_94 | -16 | 617 | Compositional bias | Note=Gly-rich |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000394723 | + | 0 | 11 | 1977_2100 | -38 | 628 | Compositional bias | Note=Ser-rich |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000394723 | + | 0 | 11 | 2291_2299 | -38 | 628 | Compositional bias | Note=Poly-Ser |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000394723 | + | 0 | 11 | 6_94 | -38 | 628 | Compositional bias | Note=Gly-rich |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000297183 | + | 22 | 36 | 1695_1759 | 1400 | 2618 | Domain | KH |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000360839 | + | 22 | 34 | 1695_1759 | 1400 | 2543 | Domain | KH |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000394722 | + | 0 | 11 | 1695_1759 | -16 | 617 | Domain | KH |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000394723 | + | 0 | 11 | 1695_1759 | -38 | 628 | Domain | KH |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000394722 | + | 0 | 11 | 1054_1083 | -16 | 617 | Repeat | Note=ANK 16 |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000394722 | + | 0 | 11 | 1087_1116 | -16 | 617 | Repeat | Note=ANK 17 |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000394722 | + | 0 | 11 | 1121_1150 | -16 | 617 | Repeat | Note=ANK 18 |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000394722 | + | 0 | 11 | 1154_1183 | -16 | 617 | Repeat | Note=ANK 19 |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000394722 | + | 0 | 11 | 1189_1218 | -16 | 617 | Repeat | Note=ANK 20 |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000394722 | + | 0 | 11 | 1223_1252 | -16 | 617 | Repeat | Note=ANK 21 |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000394722 | + | 0 | 11 | 1256_1285 | -16 | 617 | Repeat | Note=ANK 22 |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000394722 | + | 0 | 11 | 1291_1320 | -16 | 617 | Repeat | Note=ANK 23 |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000394722 | + | 0 | 11 | 1324_1353 | -16 | 617 | Repeat | Note=ANK 24 |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000394722 | + | 0 | 11 | 1357_1386 | -16 | 617 | Repeat | Note=ANK 25 |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000394722 | + | 0 | 11 | 204_233 | -16 | 617 | Repeat | Note=ANK 1 |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000394722 | + | 0 | 11 | 237_266 | -16 | 617 | Repeat | Note=ANK 2 |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000394722 | + | 0 | 11 | 271_300 | -16 | 617 | Repeat | Note=ANK 3 |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000394722 | + | 0 | 11 | 304_333 | -16 | 617 | Repeat | Note=ANK 4 |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000394722 | + | 0 | 11 | 337_366 | -16 | 617 | Repeat | Note=ANK 5 |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000394722 | + | 0 | 11 | 371_400 | -16 | 617 | Repeat | Note=ANK 6 |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000394722 | + | 0 | 11 | 404_433 | -16 | 617 | Repeat | Note=ANK 7 |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000394722 | + | 0 | 11 | 437_466 | -16 | 617 | Repeat | Note=ANK 8 |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000394722 | + | 0 | 11 | 470_499 | -16 | 617 | Repeat | Note=ANK 9 |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000394722 | + | 0 | 11 | 504_533 | -16 | 617 | Repeat | Note=ANK 10 |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000394722 | + | 0 | 11 | 534_563 | -16 | 617 | Repeat | Note=ANK 11 |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000394722 | + | 0 | 11 | 567_596 | -16 | 617 | Repeat | Note=ANK 12 |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000394722 | + | 0 | 11 | 600_629 | -16 | 617 | Repeat | Note=ANK 13 |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000394722 | + | 0 | 11 | 634_663 | -16 | 617 | Repeat | Note=ANK 14 |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000394722 | + | 0 | 11 | 667_696 | -16 | 617 | Repeat | Note=ANK 15 |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000394723 | + | 0 | 11 | 1054_1083 | -38 | 628 | Repeat | Note=ANK 16 |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000394723 | + | 0 | 11 | 1087_1116 | -38 | 628 | Repeat | Note=ANK 17 |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000394723 | + | 0 | 11 | 1121_1150 | -38 | 628 | Repeat | Note=ANK 18 |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000394723 | + | 0 | 11 | 1154_1183 | -38 | 628 | Repeat | Note=ANK 19 |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000394723 | + | 0 | 11 | 1189_1218 | -38 | 628 | Repeat | Note=ANK 20 |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000394723 | + | 0 | 11 | 1223_1252 | -38 | 628 | Repeat | Note=ANK 21 |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000394723 | + | 0 | 11 | 1256_1285 | -38 | 628 | Repeat | Note=ANK 22 |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000394723 | + | 0 | 11 | 1291_1320 | -38 | 628 | Repeat | Note=ANK 23 |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000394723 | + | 0 | 11 | 1324_1353 | -38 | 628 | Repeat | Note=ANK 24 |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000394723 | + | 0 | 11 | 1357_1386 | -38 | 628 | Repeat | Note=ANK 25 |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000394723 | + | 0 | 11 | 204_233 | -38 | 628 | Repeat | Note=ANK 1 |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000394723 | + | 0 | 11 | 237_266 | -38 | 628 | Repeat | Note=ANK 2 |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000394723 | + | 0 | 11 | 271_300 | -38 | 628 | Repeat | Note=ANK 3 |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000394723 | + | 0 | 11 | 304_333 | -38 | 628 | Repeat | Note=ANK 4 |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000394723 | + | 0 | 11 | 337_366 | -38 | 628 | Repeat | Note=ANK 5 |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000394723 | + | 0 | 11 | 371_400 | -38 | 628 | Repeat | Note=ANK 6 |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000394723 | + | 0 | 11 | 404_433 | -38 | 628 | Repeat | Note=ANK 7 |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000394723 | + | 0 | 11 | 437_466 | -38 | 628 | Repeat | Note=ANK 8 |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000394723 | + | 0 | 11 | 470_499 | -38 | 628 | Repeat | Note=ANK 9 |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000394723 | + | 0 | 11 | 504_533 | -38 | 628 | Repeat | Note=ANK 10 |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000394723 | + | 0 | 11 | 534_563 | -38 | 628 | Repeat | Note=ANK 11 |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000394723 | + | 0 | 11 | 567_596 | -38 | 628 | Repeat | Note=ANK 12 |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000394723 | + | 0 | 11 | 600_629 | -38 | 628 | Repeat | Note=ANK 13 |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000394723 | + | 0 | 11 | 634_663 | -38 | 628 | Repeat | Note=ANK 14 |
Tgene | >ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000394723 | + | 0 | 11 | 667_696 | -38 | 628 | Repeat | Note=ANK 15 |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | >PCDHA11 | chr5:140251079 | chr5:139892948 | ENST00000398640 | + | 1 | 4 | 922_929 | 797 | 950 | Compositional bias | Note=Poly-Lys |
Hgene | >PCDHA11 | chr5:140251079 | chr5:139892948 | ENST00000398640 | + | 1 | 4 | 733_893 | 797 | 950 | Region | Note=6 X 4 AA repeats of P-X-X-P |
Hgene | >PCDHA11 | chr5:140251079 | chr5:139892948 | ENST00000398640 | + | 1 | 4 | 831_834 | 797 | 950 | Repeat | Note=PXXP 4 |
Hgene | >PCDHA11 | chr5:140251079 | chr5:139892948 | ENST00000398640 | + | 1 | 4 | 872_875 | 797 | 950 | Repeat | Note=PXXP 5 |
Hgene | >PCDHA11 | chr5:140251079 | chr5:139892948 | ENST00000398640 | + | 1 | 4 | 890_893 | 797 | 950 | Repeat | Note=PXXP 6 |
Hgene | >PCDHA11 | chr5:140251079 | chr5:139892948 | ENST00000398640 | + | 1 | 4 | 718_949 | 797 | 950 | Topological domain | Cytoplasmic |
Tgene | ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000297183 | + | 22 | 36 | 775_852 | 1400 | 2618 | Coiled coil | Ontology_term=ECO:0000255 |
Tgene | ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000360839 | + | 22 | 34 | 775_852 | 1400 | 2543 | Coiled coil | Ontology_term=ECO:0000255 |
Tgene | ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000297183 | + | 22 | 36 | 6_94 | 1400 | 2618 | Compositional bias | Note=Gly-rich |
Tgene | ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000360839 | + | 22 | 34 | 6_94 | 1400 | 2543 | Compositional bias | Note=Gly-rich |
Tgene | ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000297183 | + | 22 | 36 | 1054_1083 | 1400 | 2618 | Repeat | Note=ANK 16 |
Tgene | ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000297183 | + | 22 | 36 | 1087_1116 | 1400 | 2618 | Repeat | Note=ANK 17 |
Tgene | ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000297183 | + | 22 | 36 | 1121_1150 | 1400 | 2618 | Repeat | Note=ANK 18 |
Tgene | ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000297183 | + | 22 | 36 | 1154_1183 | 1400 | 2618 | Repeat | Note=ANK 19 |
Tgene | ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000297183 | + | 22 | 36 | 1189_1218 | 1400 | 2618 | Repeat | Note=ANK 20 |
Tgene | ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000297183 | + | 22 | 36 | 1223_1252 | 1400 | 2618 | Repeat | Note=ANK 21 |
Tgene | ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000297183 | + | 22 | 36 | 1256_1285 | 1400 | 2618 | Repeat | Note=ANK 22 |
Tgene | ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000297183 | + | 22 | 36 | 1291_1320 | 1400 | 2618 | Repeat | Note=ANK 23 |
Tgene | ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000297183 | + | 22 | 36 | 1324_1353 | 1400 | 2618 | Repeat | Note=ANK 24 |
Tgene | ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000297183 | + | 22 | 36 | 1357_1386 | 1400 | 2618 | Repeat | Note=ANK 25 |
Tgene | ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000297183 | + | 22 | 36 | 204_233 | 1400 | 2618 | Repeat | Note=ANK 1 |
Tgene | ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000297183 | + | 22 | 36 | 237_266 | 1400 | 2618 | Repeat | Note=ANK 2 |
Tgene | ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000297183 | + | 22 | 36 | 271_300 | 1400 | 2618 | Repeat | Note=ANK 3 |
Tgene | ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000297183 | + | 22 | 36 | 304_333 | 1400 | 2618 | Repeat | Note=ANK 4 |
Tgene | ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000297183 | + | 22 | 36 | 337_366 | 1400 | 2618 | Repeat | Note=ANK 5 |
Tgene | ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000297183 | + | 22 | 36 | 371_400 | 1400 | 2618 | Repeat | Note=ANK 6 |
Tgene | ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000297183 | + | 22 | 36 | 404_433 | 1400 | 2618 | Repeat | Note=ANK 7 |
Tgene | ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000297183 | + | 22 | 36 | 437_466 | 1400 | 2618 | Repeat | Note=ANK 8 |
Tgene | ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000297183 | + | 22 | 36 | 470_499 | 1400 | 2618 | Repeat | Note=ANK 9 |
Tgene | ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000297183 | + | 22 | 36 | 504_533 | 1400 | 2618 | Repeat | Note=ANK 10 |
Tgene | ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000297183 | + | 22 | 36 | 534_563 | 1400 | 2618 | Repeat | Note=ANK 11 |
Tgene | ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000297183 | + | 22 | 36 | 567_596 | 1400 | 2618 | Repeat | Note=ANK 12 |
Tgene | ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000297183 | + | 22 | 36 | 600_629 | 1400 | 2618 | Repeat | Note=ANK 13 |
Tgene | ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000297183 | + | 22 | 36 | 634_663 | 1400 | 2618 | Repeat | Note=ANK 14 |
Tgene | ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000297183 | + | 22 | 36 | 667_696 | 1400 | 2618 | Repeat | Note=ANK 15 |
Tgene | ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000360839 | + | 22 | 34 | 1054_1083 | 1400 | 2543 | Repeat | Note=ANK 16 |
Tgene | ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000360839 | + | 22 | 34 | 1087_1116 | 1400 | 2543 | Repeat | Note=ANK 17 |
Tgene | ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000360839 | + | 22 | 34 | 1121_1150 | 1400 | 2543 | Repeat | Note=ANK 18 |
Tgene | ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000360839 | + | 22 | 34 | 1154_1183 | 1400 | 2543 | Repeat | Note=ANK 19 |
Tgene | ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000360839 | + | 22 | 34 | 1189_1218 | 1400 | 2543 | Repeat | Note=ANK 20 |
Tgene | ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000360839 | + | 22 | 34 | 1223_1252 | 1400 | 2543 | Repeat | Note=ANK 21 |
Tgene | ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000360839 | + | 22 | 34 | 1256_1285 | 1400 | 2543 | Repeat | Note=ANK 22 |
Tgene | ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000360839 | + | 22 | 34 | 1291_1320 | 1400 | 2543 | Repeat | Note=ANK 23 |
Tgene | ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000360839 | + | 22 | 34 | 1324_1353 | 1400 | 2543 | Repeat | Note=ANK 24 |
Tgene | ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000360839 | + | 22 | 34 | 1357_1386 | 1400 | 2543 | Repeat | Note=ANK 25 |
Tgene | ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000360839 | + | 22 | 34 | 204_233 | 1400 | 2543 | Repeat | Note=ANK 1 |
Tgene | ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000360839 | + | 22 | 34 | 237_266 | 1400 | 2543 | Repeat | Note=ANK 2 |
Tgene | ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000360839 | + | 22 | 34 | 271_300 | 1400 | 2543 | Repeat | Note=ANK 3 |
Tgene | ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000360839 | + | 22 | 34 | 304_333 | 1400 | 2543 | Repeat | Note=ANK 4 |
Tgene | ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000360839 | + | 22 | 34 | 337_366 | 1400 | 2543 | Repeat | Note=ANK 5 |
Tgene | ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000360839 | + | 22 | 34 | 371_400 | 1400 | 2543 | Repeat | Note=ANK 6 |
Tgene | ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000360839 | + | 22 | 34 | 404_433 | 1400 | 2543 | Repeat | Note=ANK 7 |
Tgene | ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000360839 | + | 22 | 34 | 437_466 | 1400 | 2543 | Repeat | Note=ANK 8 |
Tgene | ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000360839 | + | 22 | 34 | 470_499 | 1400 | 2543 | Repeat | Note=ANK 9 |
Tgene | ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000360839 | + | 22 | 34 | 504_533 | 1400 | 2543 | Repeat | Note=ANK 10 |
Tgene | ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000360839 | + | 22 | 34 | 534_563 | 1400 | 2543 | Repeat | Note=ANK 11 |
Tgene | ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000360839 | + | 22 | 34 | 567_596 | 1400 | 2543 | Repeat | Note=ANK 12 |
Tgene | ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000360839 | + | 22 | 34 | 600_629 | 1400 | 2543 | Repeat | Note=ANK 13 |
Tgene | ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000360839 | + | 22 | 34 | 634_663 | 1400 | 2543 | Repeat | Note=ANK 14 |
Tgene | ANKHD1 | chr5:140251079 | chr5:139892948 | ENST00000360839 | + | 22 | 34 | 667_696 | 1400 | 2543 | Repeat | Note=ANK 15 |
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FusionGeneSequence for PCDHA11_ANKHD1 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_PCDHA11_ENST00000398640_chr5_140251079_+_ANKHD1_ENST00000360839_chr5_139892948_+_1940aa MFGFQRRGLGTPRLQLWLLLLEFWEVGSGQLHYSVSEEAKHGTFVGRIAQDLGLELAELVQRLFRVASKTHGDLLEVNLQNGILFVNSRI DREELCGQSAECSIHLEVIVDRPLQVFHVNVEVKDINDNPPVFSLREQKLLIAESKQSDSRFPLEGASDADIEENALLTYRLSKNEYFSL DSPTNGKQIKRLSLILKKSLDREKTPELNLLLTATDGGKPELTGTVRLLVQVLDVNDNDPEFDKSEYKVSLMENAAKETLVLKLNATDRD EGVNGEVTYSLMSIKPNGRHLFTLDQNNGEVRVNGTLDYEENKFYKIEVQATDKGTPPMAGHCTVWVEILDTNDNSPEVAVTSLSLPVRE DAQPSTVIALISVSDRDSGVNGQVTCSLTPHVPFKLVSTFKNYYSLVLDSALDRENVWAYELVVTARDGGSPSLWATARVSVEVADVNDN APAFAQPEYTVFVKENNPPGCHIFTVSARDADAQENALVSYSLVERRLGDRALSSYVSVHAESGKVYALQPLDHEELELLQFQVSARDAG VPPLSSNVTLQVFVLDENDNAPALLATQAGSAGGAVNKLVPRSVGAGHVVAKVRAVDADSGYNAWLSYELQPAAGGSRIPFRVGLYTGEI STTRALDEADSPRHRLLVLVKDHGEPALTATATVLVSLVESGQAPKASSRTLAGAASPEAALVDVNVYLIIAICVVSSLLVLTLLLYTAL WWSATPTEGACAPGKPTLVCSRAVGSWSYSQQRRQRVCSEEGPPKTDLMAFSPSLPLGLNKEEEGERQEPGSNHPGQELLKKCHQCVETI VKAKDQQAAEANKNASILLKELDLEKSREESRKQALAAKREKRKEKRKKKKEEQKRKQEEDEENKPKENSELPEDEDEEENDEDVEQEVP IEPPSATTTTTIGISATSATFTNVFGKKRANVVTTPSTNRKNKKNKTKETPPTAHLILPEQHMSLAQQKADKNKINGEPRGGGAGGNSDS DNLDSTDCNSESSSGGKSQELNFVMDVNSSKYPSLLLHSQEEKTSTATSKTQTRLEGEVTPNSLSTSYKTVSLPLSSPNIKLNLTSPKRG QKREEGWKEVVRRSKKLSVPASVVSRIMGRGGCNITAIQDVTGAHIDVDKQKDKNGERMITIRGGTESTRYAVQLINALIQDPAKELEDL IPKNHIRTPASTKSIHANFSSGVGTTAASSKNAFPLGAPTLVTSQATTLSTFQPANKLNKNVPTNVRSSFPVSLPLAYPHPHFALLAAQT MQQIRHPRLPMAQFGGTFSPSPNTWGPFPVRPVNPGNTNSSPKHNNTSRLPNQNGTVLPSESAGLATASCPITVSSVVAASQQLCVTNTR TPSSVRKQLFACVPKTSPPATVISSVTSTCSSLPSVSSAPITSGQAPTTFLPASTSQAQLSSQKMESFSAVPPTKEKVSTQDQPMANLCT PSSTANSCSSSASNTPGAPETHPSSSPTPTSSNTQEEAQPSSVSDLSPMSMPFASNSEPAPLTLTSPRMVAADNQDTSNLPQLAVPAPRV SHRMQPRGSFYSMVPNATIHQDPQSIFVTNPVTLTPPQGPPAAVQLSSAVNIMNGSQMHINPANKSLPPTFGPATLFNHFSSLFDSSQVP ANQGWGDGPLSSRVATDASFTVQSAFLGNSVLGHLENMHPDNSKAPGFRPPSQRVSTSPVGLPSIDPSGSSPSSSSAPLASFSGIPGTRV FLQGPAPVGTPSFNRQHFSPHPWTSASNSSTSAPPTLGQPKGVSASQDRKIPPPIGTERLARIRQGGSVAQAPAGTSFVAPVGHSGIWSF GVNAVSEGLSGWSQSVMGNHPMHQQLSDPSTFSQHQPMERDDSGMVAPSNIFHQPMASGFVDFSKGLPISMYGGTIIPSHPQLADVPGGP >In-frame_PCDHA11_ENST00000398640_chr5_140251079_+_ANKHD1_ENST00000297183_chr5_139892948_+_2015aa MFGFQRRGLGTPRLQLWLLLLEFWEVGSGQLHYSVSEEAKHGTFVGRIAQDLGLELAELVQRLFRVASKTHGDLLEVNLQNGILFVNSRI DREELCGQSAECSIHLEVIVDRPLQVFHVNVEVKDINDNPPVFSLREQKLLIAESKQSDSRFPLEGASDADIEENALLTYRLSKNEYFSL DSPTNGKQIKRLSLILKKSLDREKTPELNLLLTATDGGKPELTGTVRLLVQVLDVNDNDPEFDKSEYKVSLMENAAKETLVLKLNATDRD EGVNGEVTYSLMSIKPNGRHLFTLDQNNGEVRVNGTLDYEENKFYKIEVQATDKGTPPMAGHCTVWVEILDTNDNSPEVAVTSLSLPVRE DAQPSTVIALISVSDRDSGVNGQVTCSLTPHVPFKLVSTFKNYYSLVLDSALDRENVWAYELVVTARDGGSPSLWATARVSVEVADVNDN APAFAQPEYTVFVKENNPPGCHIFTVSARDADAQENALVSYSLVERRLGDRALSSYVSVHAESGKVYALQPLDHEELELLQFQVSARDAG VPPLSSNVTLQVFVLDENDNAPALLATQAGSAGGAVNKLVPRSVGAGHVVAKVRAVDADSGYNAWLSYELQPAAGGSRIPFRVGLYTGEI STTRALDEADSPRHRLLVLVKDHGEPALTATATVLVSLVESGQAPKASSRTLAGAASPEAALVDVNVYLIIAICVVSSLLVLTLLLYTAL WWSATPTEGACAPGKPTLVCSRAVGSWSYSQQRRQRVCSEEGPPKTDLMAFSPSLPLGLNKEEEGERQEPGSNHPGQELLKKCHQCVETI VKAKDQQAAEANKNASILLKELDLEKSREESRKQALAAKREKRKEKRKKKKEEQKRKQEEDEENKPKENSELPEDEDEEENDEDVEQEVP IEPPSATTTTTIGISATSATFTNVFGKKRANVVTTPSTNRKNKKNKTKETPPTAHLILPEQHMSLAQQKADKNKINGEPRGGGAGGNSDS DNLDSTDCNSESSSGGKSQELNFVMDVNSSKYPSLLLHSQEEKTSTATSKTQTRLEGEVTPNSLSTSYKTVSLPLSSPNIKLNLTSPKRG QKREEGWKEVVRRSKKLSVPASVVSRIMGRGGCNITAIQDVTGAHIDVDKQKDKNGERMITIRGGTESTRYAVQLINALIQDPAKELEDL IPKNHIRTPASTKSIHANFSSGVGTTAASSKNAFPLGAPTLVTSQATTLSTFQPANKLNKNVPTNVRSSFPVSLPLAYPHPHFALLAAQT MQQIRHPRLPMAQFGGTFSPSPNTWGPFPVRPVNPGNTNSSPKHNNTSRLPNQNGTVLPSESAGLATASCPITVSSVVAASQQLCVTNTR TPSSVRKQLFACVPKTSPPATVISSVTSTCSSLPSVSSAPITSGQAPTTFLPASTSQAQLSSQKMESFSAVPPTKEKVSTQDQPMANLCT PSSTANSCSSSASNTPGAPETHPSSSPTPTSSNTQEEAQPSSVSDLSPMSMPFASNSEPAPLTLTSPRMVAADNQDTSNLPQLAVPAPRV SHRMQPRGSFYSMVPNATIHQDPQSIFVTNPVTLTPPQGPPAAVQLSSAVNIMNGSQMHINPANKSLPPTFGPATLFNHFSSLFDSSQVP ANQGWGDGPLSSRVATDASFTVQSAFLGNSVLGHLENMHPDNSKAPGFRPPSQRVSTSPVGLPSIDPSGSSPSSSSAPLASFSGIPGTRV FLQGPAPVGTPSFNRQHFSPHPWTSASNSSTSAPPTLGQPKGVSASQDRKIPPPIGTERLARIRQGGSVAQAPAGTSFVAPVGHSGIWSF GVNAVSEGLSGWSQSVMGNHPMHQQLSDPSTFSQHQPMERDDSGMVAPSNIFHQPMASGFVDFSKGLPISMYGGTIIPSHPQLADVPGGP LFNGLHNPDPAWNPMIKVIQNSTECTDAQQASLLPSVPALKGEIPSPQLTRPKKRIGRPMVASPNQRHQDHLRPKVPAGVQELTHCPDTP |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_PCDHA11_ENST00000398640_chr5_140251079_+_ANKHD1_ENST00000360839_chr5_139892948_+_5820nt ATGTTTGGTTTTCAGAGAAGGGGATTGGGCACCCCACGACTACAGCTCTGGCTTCTCCTCCTCGAATTCTGGGAGGTGGGGAGCGGCCAG CTCCACTACTCCGTCTCGGAGGAGGCCAAACACGGCACCTTCGTGGGCCGCATCGCGCAGGACCTGGGGCTGGAGCTGGCGGAGCTGGTG CAGCGCCTGTTCCGGGTGGCGTCCAAAACACATGGGGACCTTCTGGAGGTAAATCTGCAGAATGGCATTTTGTTTGTGAATTCTCGGATC GACCGCGAGGAGCTGTGCGGGCAGAGCGCGGAGTGCAGCATCCACCTGGAGGTGATCGTGGACAGGCCGCTGCAGGTTTTCCATGTGAAC GTGGAGGTGAAGGACATTAACGACAACCCGCCGGTGTTCTCGCTCAGAGAACAAAAGCTGCTGATTGCGGAATCTAAGCAATCGGACTCG CGTTTTCCACTAGAGGGAGCTTCTGATGCTGACATTGAAGAGAATGCTCTATTGACCTACAGGCTAAGTAAAAATGAGTATTTTTCTTTA GATTCACCAACAAATGGTAAGCAGATTAAAAGACTGTCACTTATTTTAAAGAAGTCTCTGGATAGAGAGAAAACTCCGGAACTTAATTTG CTGCTAACAGCTACAGACGGGGGAAAACCAGAGCTTACTGGCACCGTTCGGCTGTTAGTCCAAGTCTTGGATGTCAACGACAATGATCCA GAGTTTGATAAATCAGAATATAAGGTGAGCCTTATGGAAAATGCTGCTAAAGAAACTCTTGTGCTCAAACTAAACGCCACAGACCGAGAC GAAGGAGTCAATGGAGAGGTAACATACTCCTTAATGTCAATTAAGCCCAATGGAAGACACTTATTTACACTAGATCAAAATAATGGAGAA GTGAGGGTCAATGGAACTTTAGATTATGAAGAAAACAAGTTTTATAAAATTGAAGTACAGGCTACAGATAAGGGGACTCCCCCAATGGCA GGTCACTGTACAGTCTGGGTGGAAATCTTGGACACCAACGATAACTCTCCTGAAGTCGCCGTGACTTCCTTGTCCCTCCCAGTACGAGAG GACGCTCAGCCCAGCACGGTCATTGCCCTGATCAGCGTGTCTGACCGTGACTCAGGTGTCAACGGACAGGTGACCTGCTCGCTGACGCCC CACGTTCCCTTCAAGCTGGTGTCCACCTTCAAGAATTACTACTCGTTGGTGCTGGACAGCGCCCTGGACCGCGAGAACGTGTGGGCCTAT GAACTGGTGGTGACTGCGCGGGATGGGGGTTCGCCTTCTCTGTGGGCCACGGCCAGGGTATCCGTGGAGGTGGCCGACGTGAACGACAAT GCGCCTGCGTTCGCACAGCCCGAGTACACCGTGTTCGTGAAGGAGAACAACCCACCAGGCTGCCACATCTTCACAGTGTCGGCGCGGGAC GCGGACGCGCAGGAGAACGCGCTGGTGTCCTACTCGCTGGTGGAGCGGCGGTTGGGCGACCGCGCGCTGTCGAGCTACGTGTCGGTGCAC GCGGAGAGCGGCAAGGTGTACGCGCTGCAGCCGTTGGACCACGAGGAGCTGGAGCTGCTACAGTTCCAGGTGAGCGCGCGCGATGCGGGC GTGCCGCCTCTGAGCAGCAACGTGACGCTGCAGGTGTTCGTGCTGGACGAGAACGACAACGCGCCGGCACTGCTGGCGACTCAGGCTGGC AGCGCGGGAGGCGCAGTTAACAAGCTAGTACCGCGGTCGGTGGGTGCGGGCCACGTGGTGGCGAAGGTGCGCGCAGTGGATGCGGACTCA GGCTACAACGCGTGGCTTTCATATGAATTGCAGCCGGCGGCGGGCGGCTCGCGCATCCCGTTCCGCGTGGGGCTGTACACGGGCGAGATA AGCACAACGCGTGCCCTGGACGAGGCAGACTCGCCGCGCCACCGACTTCTAGTACTGGTGAAGGATCACGGTGAGCCGGCGCTGACGGCC ACGGCCACCGTGCTGGTGTCGTTGGTGGAGAGCGGACAGGCGCCAAAGGCCTCTTCCCGGACTTTGGCGGGCGCCGCGAGCCCAGAGGCT GCGCTGGTGGATGTCAACGTGTACCTGATCATCGCCATCTGCGTGGTGTCCAGCCTCCTGGTACTCACGCTGCTGCTGTATACGGCGCTG TGGTGGTCGGCAACGCCCACTGAGGGCGCGTGCGCGCCGGGGAAGCCCACGCTGGTGTGCTCCCGCGCGGTGGGGAGCTGGTCATACTCG CAGCAGAGGCGGCAGAGGGTGTGCTCTGAGGAGGGCCCACCTAAGACGGACCTCATGGCCTTCAGCCCCAGTCTTCCTCTAGGTCTGAAT AAAGAGGAGGAAGGGGAAAGACAGGAGCCAGGGTCAAATCACCCCGGACAGGAACTGTTGAAAAAATGTCATCAATGTGTCGAAACCATT GTGAAGGCTAAAGACCAGCAAGCTGCAGAAGCAAATAAGAATGCGAGTATTCTTTTAAAGGAACTTGATCTGGAAAAGTCAAGAGAAGAG AGCAGAAAGCAGGCTCTTGCTGCTAAAAGAGAAAAAAGAAAAGAAAAGAGAAAAAAGAAAAAAGAGGAACAGAAAAGGAAACAGGAAGAA GATGAAGAAAACAAACCTAAGGAGAATTCGGAACTACCAGAGGATGAAGATGAAGAGGAGAATGATGAAGATGTGGAGCAAGAAGTTCCC ATAGAACCTCCTAGTGCAACCACCACCACTACGATTGGAATCTCTGCAACATCTGCAACATTCACAAATGTGTTTGGGAAAAAAAGGGCC AATGTGGTGACAACTCCCAGCACCAATCGGAAAAATAAGAAGAACAAAACAAAAGAAACCCCTCCTACAGCACATTTAATTTTACCAGAA CAACATATGTCTTTAGCCCAACAAAAGGCAGATAAAAATAAAATAAATGGAGAACCTAGAGGTGGTGGTGCAGGTGGGAATAGTGATTCA GATAACTTGGACAGCACAGACTGCAACAGTGAGAGTAGCAGTGGTGGTAAAAGCCAAGAGTTAAATTTTGTGATGGATGTGAATTCCTCT AAATACCCCTCACTGCTCCTTCATTCCCAAGAAGAAAAGACAAGTACTGCTACTTCCAAAACTCAGACACGACTTGAAGGTGAAGTGACT CCTAATTCCTTGTCAACCAGCTACAAGACAGTGTCATTGCCATTAAGCTCTCCAAACATAAAGCTGAATCTCACTAGCCCTAAAAGGGGT CAGAAAAGAGAAGAAGGGTGGAAAGAAGTTGTACGAAGGTCAAAGAAATTGTCTGTTCCAGCCTCAGTGGTGTCGAGGATAATGGGAAGA GGAGGATGCAACATCACTGCAATACAGGATGTTACTGGTGCCCATATTGATGTGGATAAACAAAAAGATAAGAATGGCGAGAGAATGATC ACAATAAGGGGTGGCACAGAATCAACAAGATATGCAGTTCAACTAATCAATGCACTCATTCAAGATCCTGCTAAGGAACTGGAAGACTTG ATTCCTAAAAATCATATCAGAACACCTGCCAGCACCAAATCAATTCATGCTAACTTCTCATCTGGAGTAGGTACCACAGCAGCTTCCAGT AAAAATGCATTTCCTTTGGGTGCTCCAACTCTTGTAACTTCACAGGCAACAACGTTATCTACGTTCCAGCCCGCTAATAAACTTAATAAG AATGTTCCAACAAATGTACGTTCTTCTTTCCCAGTTTCTCTACCCTTAGCTTATCCTCACCCTCATTTTGCCCTGCTGGCTGCTCAAACT ATGCAACAGATTCGGCATCCTCGCTTACCCATGGCCCAGTTTGGAGGAACCTTCTCACCTTCTCCTAACACATGGGGACCATTCCCAGTG AGACCTGTGAATCCTGGCAACACAAATAGCTCTCCAAAGCATAATAACACAAGCCGTCTACCTAACCAGAACGGGACTGTTTTACCCTCA GAGTCTGCTGGACTAGCTACTGCCAGTTGTCCTATCACTGTCTCTTCTGTAGTTGCTGCCAGTCAGCAACTGTGTGTCACTAATACCCGG ACTCCTTCATCAGTCAGAAAGCAGTTGTTTGCCTGTGTGCCTAAGACAAGTCCTCCAGCAACAGTGATTTCTTCTGTGACAAGCACTTGT AGTTCCCTGCCTTCTGTCTCCTCTGCACCTATCACTAGCGGGCAAGCTCCCACCACATTTCTACCTGCAAGTACTTCTCAAGCACAGCTT TCTTCACAAAAGATGGAGTCTTTCTCTGCTGTGCCACCCACCAAAGAGAAAGTGTCCACACAGGACCAGCCCATGGCAAACCTATGTACC CCATCTTCAACTGCAAACAGTTGCAGTAGCTCTGCCAGCAACACCCCGGGAGCTCCAGAAACTCACCCATCCAGTAGTCCCACTCCTACT TCCAGTAACACACAAGAGGAGGCACAGCCATCCAGTGTGTCTGATTTAAGTCCTATGTCAATGCCTTTTGCATCTAACTCAGAACCTGCT CCATTGACTTTGACATCACCCAGAATGGTTGCTGCTGATAATCAGGACACCAGTAATTTACCTCAGTTAGCTGTACCAGCACCTCGAGTT TCTCATCGAATGCAGCCCAGAGGTTCTTTTTACTCCATGGTACCAAATGCAACTATTCACCAGGATCCCCAGTCTATTTTTGTTACGAAT CCAGTTACTTTAACACCACCTCAAGGCCCACCAGCTGCAGTGCAGCTTTCTTCAGCTGTGAACATTATGAATGGTTCTCAGATGCACATA AACCCAGCAAATAAGTCTTTGCCACCTACATTTGGCCCAGCCACACTTTTCAATCACTTCAGCAGTCTTTTTGATAGTAGTCAGGTGCCA GCTAACCAGGGCTGGGGAGATGGTCCACTGTCCTCACGAGTTGCTACAGATGCCTCTTTCACTGTTCAGTCAGCGTTCCTGGGTAACTCA GTGCTTGGACACTTGGAAAACATGCACCCTGATAACTCAAAGGCACCTGGCTTCAGACCACCTTCCCAGCGAGTTTCTACTAGTCCAGTT GGGTTACCATCCATTGACCCATCAGGCAGCTCCCCATCTTCCTCTTCTGCTCCTCTGGCAAGTTTTTCCGGCATACCAGGAACAAGGGTT TTCCTGCAAGGGCCAGCTCCTGTTGGGACTCCTAGTTTCAACAGACAACATTTTTCTCCCCATCCTTGGACAAGCGCCTCAAACTCATCC ACTTCTGCCCCACCAACGTTGGGCCAACCAAAAGGAGTCAGTGCCAGTCAAGATCGAAAGATACCTCCCCCAATTGGAACAGAGAGACTG GCCCGAATTCGGCAAGGAGGGTCTGTTGCACAAGCCCCGGCGGGGACCAGTTTTGTCGCTCCCGTTGGACACAGTGGAATCTGGTCATTT GGTGTCAATGCTGTGTCAGAAGGCTTATCAGGTTGGTCGCAATCTGTGATGGGGAACCATCCAATGCATCAACAATTATCAGACCCAAGC ACATTCTCCCAACATCAGCCAATGGAGAGAGATGATTCTGGAATGGTAGCCCCCTCTAACATTTTTCATCAGCCTATGGCAAGTGGTTTT GTGGATTTTTCTAAAGGTCTGCCAATTTCCATGTATGGAGGCACCATAATACCCTCTCATCCTCAGCTTGCTGATGTTCCAGGAGGCCCT CTGTTTAATGGACTTCACAATCCAGATCCTGCTTGGAACCCTATGATAAAAGTTATCCAAAATTCAACTGAATGCACTGATGCCCAGCAG >In-frame_PCDHA11_ENST00000398640_chr5_140251079_+_ANKHD1_ENST00000297183_chr5_139892948_+_6045nt ATGTTTGGTTTTCAGAGAAGGGGATTGGGCACCCCACGACTACAGCTCTGGCTTCTCCTCCTCGAATTCTGGGAGGTGGGGAGCGGCCAG CTCCACTACTCCGTCTCGGAGGAGGCCAAACACGGCACCTTCGTGGGCCGCATCGCGCAGGACCTGGGGCTGGAGCTGGCGGAGCTGGTG CAGCGCCTGTTCCGGGTGGCGTCCAAAACACATGGGGACCTTCTGGAGGTAAATCTGCAGAATGGCATTTTGTTTGTGAATTCTCGGATC GACCGCGAGGAGCTGTGCGGGCAGAGCGCGGAGTGCAGCATCCACCTGGAGGTGATCGTGGACAGGCCGCTGCAGGTTTTCCATGTGAAC GTGGAGGTGAAGGACATTAACGACAACCCGCCGGTGTTCTCGCTCAGAGAACAAAAGCTGCTGATTGCGGAATCTAAGCAATCGGACTCG CGTTTTCCACTAGAGGGAGCTTCTGATGCTGACATTGAAGAGAATGCTCTATTGACCTACAGGCTAAGTAAAAATGAGTATTTTTCTTTA GATTCACCAACAAATGGTAAGCAGATTAAAAGACTGTCACTTATTTTAAAGAAGTCTCTGGATAGAGAGAAAACTCCGGAACTTAATTTG CTGCTAACAGCTACAGACGGGGGAAAACCAGAGCTTACTGGCACCGTTCGGCTGTTAGTCCAAGTCTTGGATGTCAACGACAATGATCCA GAGTTTGATAAATCAGAATATAAGGTGAGCCTTATGGAAAATGCTGCTAAAGAAACTCTTGTGCTCAAACTAAACGCCACAGACCGAGAC GAAGGAGTCAATGGAGAGGTAACATACTCCTTAATGTCAATTAAGCCCAATGGAAGACACTTATTTACACTAGATCAAAATAATGGAGAA GTGAGGGTCAATGGAACTTTAGATTATGAAGAAAACAAGTTTTATAAAATTGAAGTACAGGCTACAGATAAGGGGACTCCCCCAATGGCA GGTCACTGTACAGTCTGGGTGGAAATCTTGGACACCAACGATAACTCTCCTGAAGTCGCCGTGACTTCCTTGTCCCTCCCAGTACGAGAG GACGCTCAGCCCAGCACGGTCATTGCCCTGATCAGCGTGTCTGACCGTGACTCAGGTGTCAACGGACAGGTGACCTGCTCGCTGACGCCC CACGTTCCCTTCAAGCTGGTGTCCACCTTCAAGAATTACTACTCGTTGGTGCTGGACAGCGCCCTGGACCGCGAGAACGTGTGGGCCTAT GAACTGGTGGTGACTGCGCGGGATGGGGGTTCGCCTTCTCTGTGGGCCACGGCCAGGGTATCCGTGGAGGTGGCCGACGTGAACGACAAT GCGCCTGCGTTCGCACAGCCCGAGTACACCGTGTTCGTGAAGGAGAACAACCCACCAGGCTGCCACATCTTCACAGTGTCGGCGCGGGAC GCGGACGCGCAGGAGAACGCGCTGGTGTCCTACTCGCTGGTGGAGCGGCGGTTGGGCGACCGCGCGCTGTCGAGCTACGTGTCGGTGCAC GCGGAGAGCGGCAAGGTGTACGCGCTGCAGCCGTTGGACCACGAGGAGCTGGAGCTGCTACAGTTCCAGGTGAGCGCGCGCGATGCGGGC GTGCCGCCTCTGAGCAGCAACGTGACGCTGCAGGTGTTCGTGCTGGACGAGAACGACAACGCGCCGGCACTGCTGGCGACTCAGGCTGGC AGCGCGGGAGGCGCAGTTAACAAGCTAGTACCGCGGTCGGTGGGTGCGGGCCACGTGGTGGCGAAGGTGCGCGCAGTGGATGCGGACTCA GGCTACAACGCGTGGCTTTCATATGAATTGCAGCCGGCGGCGGGCGGCTCGCGCATCCCGTTCCGCGTGGGGCTGTACACGGGCGAGATA AGCACAACGCGTGCCCTGGACGAGGCAGACTCGCCGCGCCACCGACTTCTAGTACTGGTGAAGGATCACGGTGAGCCGGCGCTGACGGCC ACGGCCACCGTGCTGGTGTCGTTGGTGGAGAGCGGACAGGCGCCAAAGGCCTCTTCCCGGACTTTGGCGGGCGCCGCGAGCCCAGAGGCT GCGCTGGTGGATGTCAACGTGTACCTGATCATCGCCATCTGCGTGGTGTCCAGCCTCCTGGTACTCACGCTGCTGCTGTATACGGCGCTG TGGTGGTCGGCAACGCCCACTGAGGGCGCGTGCGCGCCGGGGAAGCCCACGCTGGTGTGCTCCCGCGCGGTGGGGAGCTGGTCATACTCG CAGCAGAGGCGGCAGAGGGTGTGCTCTGAGGAGGGCCCACCTAAGACGGACCTCATGGCCTTCAGCCCCAGTCTTCCTCTAGGTCTGAAT AAAGAGGAGGAAGGGGAAAGACAGGAGCCAGGGTCAAATCACCCCGGACAGGAACTGTTGAAAAAATGTCATCAATGTGTCGAAACCATT GTGAAGGCTAAAGACCAGCAAGCTGCAGAAGCAAATAAGAATGCGAGTATTCTTTTAAAGGAACTTGATCTGGAAAAGTCAAGAGAAGAG AGCAGAAAGCAGGCTCTTGCTGCTAAAAGAGAAAAAAGAAAAGAAAAGAGAAAAAAGAAAAAAGAGGAACAGAAAAGGAAACAGGAAGAA GATGAAGAAAACAAACCTAAGGAGAATTCGGAACTACCAGAGGATGAAGATGAAGAGGAGAATGATGAAGATGTGGAGCAAGAAGTTCCC ATAGAACCTCCTAGTGCAACCACCACCACTACGATTGGAATCTCTGCAACATCTGCAACATTCACAAATGTGTTTGGGAAAAAAAGGGCC AATGTGGTGACAACTCCCAGCACCAATCGGAAAAATAAGAAGAACAAAACAAAAGAAACCCCTCCTACAGCACATTTAATTTTACCAGAA CAACATATGTCTTTAGCCCAACAAAAGGCAGATAAAAATAAAATAAATGGAGAACCTAGAGGTGGTGGTGCAGGTGGGAATAGTGATTCA GATAACTTGGACAGCACAGACTGCAACAGTGAGAGTAGCAGTGGTGGTAAAAGCCAAGAGTTAAATTTTGTGATGGATGTGAATTCCTCT AAATACCCCTCACTGCTCCTTCATTCCCAAGAAGAAAAGACAAGTACTGCTACTTCCAAAACTCAGACACGACTTGAAGGTGAAGTGACT CCTAATTCCTTGTCAACCAGCTACAAGACAGTGTCATTGCCATTAAGCTCTCCAAACATAAAGCTGAATCTCACTAGCCCTAAAAGGGGT CAGAAAAGAGAAGAAGGGTGGAAAGAAGTTGTACGAAGGTCAAAGAAATTGTCTGTTCCAGCCTCAGTGGTGTCGAGGATAATGGGAAGA GGAGGATGCAACATCACTGCAATACAGGATGTTACTGGTGCCCATATTGATGTGGATAAACAAAAAGATAAGAATGGCGAGAGAATGATC ACAATAAGGGGTGGCACAGAATCAACAAGATATGCAGTTCAACTAATCAATGCACTCATTCAAGATCCTGCTAAGGAACTGGAAGACTTG ATTCCTAAAAATCATATCAGAACACCTGCCAGCACCAAATCAATTCATGCTAACTTCTCATCTGGAGTAGGTACCACAGCAGCTTCCAGT AAAAATGCATTTCCTTTGGGTGCTCCAACTCTTGTAACTTCACAGGCAACAACGTTATCTACGTTCCAGCCCGCTAATAAACTTAATAAG AATGTTCCAACAAATGTACGTTCTTCTTTCCCAGTTTCTCTACCCTTAGCTTATCCTCACCCTCATTTTGCCCTGCTGGCTGCTCAAACT ATGCAACAGATTCGGCATCCTCGCTTACCCATGGCCCAGTTTGGAGGAACCTTCTCACCTTCTCCTAACACATGGGGACCATTCCCAGTG AGACCTGTGAATCCTGGCAACACAAATAGCTCTCCAAAGCATAATAACACAAGCCGTCTACCTAACCAGAACGGGACTGTTTTACCCTCA GAGTCTGCTGGACTAGCTACTGCCAGTTGTCCTATCACTGTCTCTTCTGTAGTTGCTGCCAGTCAGCAACTGTGTGTCACTAATACCCGG ACTCCTTCATCAGTCAGAAAGCAGTTGTTTGCCTGTGTGCCTAAGACAAGTCCTCCAGCAACAGTGATTTCTTCTGTGACAAGCACTTGT AGTTCCCTGCCTTCTGTCTCCTCTGCACCTATCACTAGCGGGCAAGCTCCCACCACATTTCTACCTGCAAGTACTTCTCAAGCACAGCTT TCTTCACAAAAGATGGAGTCTTTCTCTGCTGTGCCACCCACCAAAGAGAAAGTGTCCACACAGGACCAGCCCATGGCAAACCTATGTACC CCATCTTCAACTGCAAACAGTTGCAGTAGCTCTGCCAGCAACACCCCGGGAGCTCCAGAAACTCACCCATCCAGTAGTCCCACTCCTACT TCCAGTAACACACAAGAGGAGGCACAGCCATCCAGTGTGTCTGATTTAAGTCCTATGTCAATGCCTTTTGCATCTAACTCAGAACCTGCT CCATTGACTTTGACATCACCCAGAATGGTTGCTGCTGATAATCAGGACACCAGTAATTTACCTCAGTTAGCTGTACCAGCACCTCGAGTT TCTCATCGAATGCAGCCCAGAGGTTCTTTTTACTCCATGGTACCAAATGCAACTATTCACCAGGATCCCCAGTCTATTTTTGTTACGAAT CCAGTTACTTTAACACCACCTCAAGGCCCACCAGCTGCAGTGCAGCTTTCTTCAGCTGTGAACATTATGAATGGTTCTCAGATGCACATA AACCCAGCAAATAAGTCTTTGCCACCTACATTTGGCCCAGCCACACTTTTCAATCACTTCAGCAGTCTTTTTGATAGTAGTCAGGTGCCA GCTAACCAGGGCTGGGGAGATGGTCCACTGTCCTCACGAGTTGCTACAGATGCCTCTTTCACTGTTCAGTCAGCGTTCCTGGGTAACTCA GTGCTTGGACACTTGGAAAACATGCACCCTGATAACTCAAAGGCACCTGGCTTCAGACCACCTTCCCAGCGAGTTTCTACTAGTCCAGTT GGGTTACCATCCATTGACCCATCAGGCAGCTCCCCATCTTCCTCTTCTGCTCCTCTGGCAAGTTTTTCCGGCATACCAGGAACAAGGGTT TTCCTGCAAGGGCCAGCTCCTGTTGGGACTCCTAGTTTCAACAGACAACATTTTTCTCCCCATCCTTGGACAAGCGCCTCAAACTCATCC ACTTCTGCCCCACCAACGTTGGGCCAACCAAAAGGAGTCAGTGCCAGTCAAGATCGAAAGATACCTCCCCCAATTGGAACAGAGAGACTG GCCCGAATTCGGCAAGGAGGGTCTGTTGCACAAGCCCCGGCGGGGACCAGTTTTGTCGCTCCCGTTGGACACAGTGGAATCTGGTCATTT GGTGTCAATGCTGTGTCAGAAGGCTTATCAGGTTGGTCGCAATCTGTGATGGGGAACCATCCAATGCATCAACAATTATCAGACCCAAGC ACATTCTCCCAACATCAGCCAATGGAGAGAGATGATTCTGGAATGGTAGCCCCCTCTAACATTTTTCATCAGCCTATGGCAAGTGGTTTT GTGGATTTTTCTAAAGGTCTGCCAATTTCCATGTATGGAGGCACCATAATACCCTCTCATCCTCAGCTTGCTGATGTTCCAGGAGGCCCT CTGTTTAATGGACTTCACAATCCAGATCCTGCTTGGAACCCTATGATAAAAGTTATCCAAAATTCAACTGAATGCACTGATGCCCAGCAG GCCAGTCTGCTTCCTTCAGTCCCTGCTCTCAAAGGGGAAATCCCATCACCTCAGCTAACCAGACCGAAGAAGAGAATTGGACGGCCGATG GTGGCCTCTCCTAACCAGAGGCACCAGGATCATCTACGACCGAAAGTTCCTGCTGGAGTGCAAGAACTCACCCATTGCCCGGACACCCCC CTGCTGCCTCCCTCAGATTCCCGGGGTCACAACTCCTCCAACAGCCCCTCTCTCCAAGCTGGAGGAGCTGAAGGAGCAGGAGACAGAGGA |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_PCDHA11_ENST00000398640_chr5_140251079_+_ANKHD1_ENST00000360839_chr5_139892948_+_6258nt ATGTTTGGTTTTCAGAGAAGGGGATTGGGCACCCCACGACTACAGCTCTGGCTTCTCCTCCTCGAATTCTGGGAGGTGGGGAGCGGCCAG CTCCACTACTCCGTCTCGGAGGAGGCCAAACACGGCACCTTCGTGGGCCGCATCGCGCAGGACCTGGGGCTGGAGCTGGCGGAGCTGGTG CAGCGCCTGTTCCGGGTGGCGTCCAAAACACATGGGGACCTTCTGGAGGTAAATCTGCAGAATGGCATTTTGTTTGTGAATTCTCGGATC GACCGCGAGGAGCTGTGCGGGCAGAGCGCGGAGTGCAGCATCCACCTGGAGGTGATCGTGGACAGGCCGCTGCAGGTTTTCCATGTGAAC GTGGAGGTGAAGGACATTAACGACAACCCGCCGGTGTTCTCGCTCAGAGAACAAAAGCTGCTGATTGCGGAATCTAAGCAATCGGACTCG CGTTTTCCACTAGAGGGAGCTTCTGATGCTGACATTGAAGAGAATGCTCTATTGACCTACAGGCTAAGTAAAAATGAGTATTTTTCTTTA GATTCACCAACAAATGGTAAGCAGATTAAAAGACTGTCACTTATTTTAAAGAAGTCTCTGGATAGAGAGAAAACTCCGGAACTTAATTTG CTGCTAACAGCTACAGACGGGGGAAAACCAGAGCTTACTGGCACCGTTCGGCTGTTAGTCCAAGTCTTGGATGTCAACGACAATGATCCA GAGTTTGATAAATCAGAATATAAGGTGAGCCTTATGGAAAATGCTGCTAAAGAAACTCTTGTGCTCAAACTAAACGCCACAGACCGAGAC GAAGGAGTCAATGGAGAGGTAACATACTCCTTAATGTCAATTAAGCCCAATGGAAGACACTTATTTACACTAGATCAAAATAATGGAGAA GTGAGGGTCAATGGAACTTTAGATTATGAAGAAAACAAGTTTTATAAAATTGAAGTACAGGCTACAGATAAGGGGACTCCCCCAATGGCA GGTCACTGTACAGTCTGGGTGGAAATCTTGGACACCAACGATAACTCTCCTGAAGTCGCCGTGACTTCCTTGTCCCTCCCAGTACGAGAG GACGCTCAGCCCAGCACGGTCATTGCCCTGATCAGCGTGTCTGACCGTGACTCAGGTGTCAACGGACAGGTGACCTGCTCGCTGACGCCC CACGTTCCCTTCAAGCTGGTGTCCACCTTCAAGAATTACTACTCGTTGGTGCTGGACAGCGCCCTGGACCGCGAGAACGTGTGGGCCTAT GAACTGGTGGTGACTGCGCGGGATGGGGGTTCGCCTTCTCTGTGGGCCACGGCCAGGGTATCCGTGGAGGTGGCCGACGTGAACGACAAT GCGCCTGCGTTCGCACAGCCCGAGTACACCGTGTTCGTGAAGGAGAACAACCCACCAGGCTGCCACATCTTCACAGTGTCGGCGCGGGAC GCGGACGCGCAGGAGAACGCGCTGGTGTCCTACTCGCTGGTGGAGCGGCGGTTGGGCGACCGCGCGCTGTCGAGCTACGTGTCGGTGCAC GCGGAGAGCGGCAAGGTGTACGCGCTGCAGCCGTTGGACCACGAGGAGCTGGAGCTGCTACAGTTCCAGGTGAGCGCGCGCGATGCGGGC GTGCCGCCTCTGAGCAGCAACGTGACGCTGCAGGTGTTCGTGCTGGACGAGAACGACAACGCGCCGGCACTGCTGGCGACTCAGGCTGGC AGCGCGGGAGGCGCAGTTAACAAGCTAGTACCGCGGTCGGTGGGTGCGGGCCACGTGGTGGCGAAGGTGCGCGCAGTGGATGCGGACTCA GGCTACAACGCGTGGCTTTCATATGAATTGCAGCCGGCGGCGGGCGGCTCGCGCATCCCGTTCCGCGTGGGGCTGTACACGGGCGAGATA AGCACAACGCGTGCCCTGGACGAGGCAGACTCGCCGCGCCACCGACTTCTAGTACTGGTGAAGGATCACGGTGAGCCGGCGCTGACGGCC ACGGCCACCGTGCTGGTGTCGTTGGTGGAGAGCGGACAGGCGCCAAAGGCCTCTTCCCGGACTTTGGCGGGCGCCGCGAGCCCAGAGGCT GCGCTGGTGGATGTCAACGTGTACCTGATCATCGCCATCTGCGTGGTGTCCAGCCTCCTGGTACTCACGCTGCTGCTGTATACGGCGCTG TGGTGGTCGGCAACGCCCACTGAGGGCGCGTGCGCGCCGGGGAAGCCCACGCTGGTGTGCTCCCGCGCGGTGGGGAGCTGGTCATACTCG CAGCAGAGGCGGCAGAGGGTGTGCTCTGAGGAGGGCCCACCTAAGACGGACCTCATGGCCTTCAGCCCCAGTCTTCCTCTAGGTCTGAAT AAAGAGGAGGAAGGGGAAAGACAGGAGCCAGGGTCAAATCACCCCGGACAGGAACTGTTGAAAAAATGTCATCAATGTGTCGAAACCATT GTGAAGGCTAAAGACCAGCAAGCTGCAGAAGCAAATAAGAATGCGAGTATTCTTTTAAAGGAACTTGATCTGGAAAAGTCAAGAGAAGAG AGCAGAAAGCAGGCTCTTGCTGCTAAAAGAGAAAAAAGAAAAGAAAAGAGAAAAAAGAAAAAAGAGGAACAGAAAAGGAAACAGGAAGAA GATGAAGAAAACAAACCTAAGGAGAATTCGGAACTACCAGAGGATGAAGATGAAGAGGAGAATGATGAAGATGTGGAGCAAGAAGTTCCC ATAGAACCTCCTAGTGCAACCACCACCACTACGATTGGAATCTCTGCAACATCTGCAACATTCACAAATGTGTTTGGGAAAAAAAGGGCC AATGTGGTGACAACTCCCAGCACCAATCGGAAAAATAAGAAGAACAAAACAAAAGAAACCCCTCCTACAGCACATTTAATTTTACCAGAA CAACATATGTCTTTAGCCCAACAAAAGGCAGATAAAAATAAAATAAATGGAGAACCTAGAGGTGGTGGTGCAGGTGGGAATAGTGATTCA GATAACTTGGACAGCACAGACTGCAACAGTGAGAGTAGCAGTGGTGGTAAAAGCCAAGAGTTAAATTTTGTGATGGATGTGAATTCCTCT AAATACCCCTCACTGCTCCTTCATTCCCAAGAAGAAAAGACAAGTACTGCTACTTCCAAAACTCAGACACGACTTGAAGGTGAAGTGACT CCTAATTCCTTGTCAACCAGCTACAAGACAGTGTCATTGCCATTAAGCTCTCCAAACATAAAGCTGAATCTCACTAGCCCTAAAAGGGGT CAGAAAAGAGAAGAAGGGTGGAAAGAAGTTGTACGAAGGTCAAAGAAATTGTCTGTTCCAGCCTCAGTGGTGTCGAGGATAATGGGAAGA GGAGGATGCAACATCACTGCAATACAGGATGTTACTGGTGCCCATATTGATGTGGATAAACAAAAAGATAAGAATGGCGAGAGAATGATC ACAATAAGGGGTGGCACAGAATCAACAAGATATGCAGTTCAACTAATCAATGCACTCATTCAAGATCCTGCTAAGGAACTGGAAGACTTG ATTCCTAAAAATCATATCAGAACACCTGCCAGCACCAAATCAATTCATGCTAACTTCTCATCTGGAGTAGGTACCACAGCAGCTTCCAGT AAAAATGCATTTCCTTTGGGTGCTCCAACTCTTGTAACTTCACAGGCAACAACGTTATCTACGTTCCAGCCCGCTAATAAACTTAATAAG AATGTTCCAACAAATGTACGTTCTTCTTTCCCAGTTTCTCTACCCTTAGCTTATCCTCACCCTCATTTTGCCCTGCTGGCTGCTCAAACT ATGCAACAGATTCGGCATCCTCGCTTACCCATGGCCCAGTTTGGAGGAACCTTCTCACCTTCTCCTAACACATGGGGACCATTCCCAGTG AGACCTGTGAATCCTGGCAACACAAATAGCTCTCCAAAGCATAATAACACAAGCCGTCTACCTAACCAGAACGGGACTGTTTTACCCTCA GAGTCTGCTGGACTAGCTACTGCCAGTTGTCCTATCACTGTCTCTTCTGTAGTTGCTGCCAGTCAGCAACTGTGTGTCACTAATACCCGG ACTCCTTCATCAGTCAGAAAGCAGTTGTTTGCCTGTGTGCCTAAGACAAGTCCTCCAGCAACAGTGATTTCTTCTGTGACAAGCACTTGT AGTTCCCTGCCTTCTGTCTCCTCTGCACCTATCACTAGCGGGCAAGCTCCCACCACATTTCTACCTGCAAGTACTTCTCAAGCACAGCTT TCTTCACAAAAGATGGAGTCTTTCTCTGCTGTGCCACCCACCAAAGAGAAAGTGTCCACACAGGACCAGCCCATGGCAAACCTATGTACC CCATCTTCAACTGCAAACAGTTGCAGTAGCTCTGCCAGCAACACCCCGGGAGCTCCAGAAACTCACCCATCCAGTAGTCCCACTCCTACT TCCAGTAACACACAAGAGGAGGCACAGCCATCCAGTGTGTCTGATTTAAGTCCTATGTCAATGCCTTTTGCATCTAACTCAGAACCTGCT CCATTGACTTTGACATCACCCAGAATGGTTGCTGCTGATAATCAGGACACCAGTAATTTACCTCAGTTAGCTGTACCAGCACCTCGAGTT TCTCATCGAATGCAGCCCAGAGGTTCTTTTTACTCCATGGTACCAAATGCAACTATTCACCAGGATCCCCAGTCTATTTTTGTTACGAAT CCAGTTACTTTAACACCACCTCAAGGCCCACCAGCTGCAGTGCAGCTTTCTTCAGCTGTGAACATTATGAATGGTTCTCAGATGCACATA AACCCAGCAAATAAGTCTTTGCCACCTACATTTGGCCCAGCCACACTTTTCAATCACTTCAGCAGTCTTTTTGATAGTAGTCAGGTGCCA GCTAACCAGGGCTGGGGAGATGGTCCACTGTCCTCACGAGTTGCTACAGATGCCTCTTTCACTGTTCAGTCAGCGTTCCTGGGTAACTCA GTGCTTGGACACTTGGAAAACATGCACCCTGATAACTCAAAGGCACCTGGCTTCAGACCACCTTCCCAGCGAGTTTCTACTAGTCCAGTT GGGTTACCATCCATTGACCCATCAGGCAGCTCCCCATCTTCCTCTTCTGCTCCTCTGGCAAGTTTTTCCGGCATACCAGGAACAAGGGTT TTCCTGCAAGGGCCAGCTCCTGTTGGGACTCCTAGTTTCAACAGACAACATTTTTCTCCCCATCCTTGGACAAGCGCCTCAAACTCATCC ACTTCTGCCCCACCAACGTTGGGCCAACCAAAAGGAGTCAGTGCCAGTCAAGATCGAAAGATACCTCCCCCAATTGGAACAGAGAGACTG GCCCGAATTCGGCAAGGAGGGTCTGTTGCACAAGCCCCGGCGGGGACCAGTTTTGTCGCTCCCGTTGGACACAGTGGAATCTGGTCATTT GGTGTCAATGCTGTGTCAGAAGGCTTATCAGGTTGGTCGCAATCTGTGATGGGGAACCATCCAATGCATCAACAATTATCAGACCCAAGC ACATTCTCCCAACATCAGCCAATGGAGAGAGATGATTCTGGAATGGTAGCCCCCTCTAACATTTTTCATCAGCCTATGGCAAGTGGTTTT GTGGATTTTTCTAAAGGTCTGCCAATTTCCATGTATGGAGGCACCATAATACCCTCTCATCCTCAGCTTGCTGATGTTCCAGGAGGCCCT CTGTTTAATGGACTTCACAATCCAGATCCTGCTTGGAACCCTATGATAAAAGTTATCCAAAATTCAACTGAATGCACTGATGCCCAGCAG ATTTGGCCTGGCACGTGGGCACCTCATATTGGAAACATGCATCTCAAATATGTCAACTAAGTTAGAAGGTCTTTACTCTTTAGCCTTGTT TAAGAAACCTATGACCTTGGAAGAACCATGGGGATTTTTTTTTAATGTGCCTAAGAAATTTTCTCTGAGGCTTTAGCAATGGAAATTTGA TTGCCCATTGTATAAGAACAAATTGATTTCCTATCCACCTGATTATGTTCTCTGGTTAGTTTAGCCATTTTGAACTTAAGATCATATGAC CTTAGTGCTTTTGGCTAAACATACAGAATACTACTTGTATGCAGAAGAGAATTAGTTGATTACATGTTTCAACCTTTTAGGGTGATAAAT ACATGTATAATTGTTTACATACTTAAAAGGAAAAAGTTGAGTAAATTTCTTGTCATATAGTGGCTCTACGTAATGTAGCCTGTATTAATG >In-frame_PCDHA11_ENST00000398640_chr5_140251079_+_ANKHD1_ENST00000297183_chr5_139892948_+_6386nt ATGTTTGGTTTTCAGAGAAGGGGATTGGGCACCCCACGACTACAGCTCTGGCTTCTCCTCCTCGAATTCTGGGAGGTGGGGAGCGGCCAG CTCCACTACTCCGTCTCGGAGGAGGCCAAACACGGCACCTTCGTGGGCCGCATCGCGCAGGACCTGGGGCTGGAGCTGGCGGAGCTGGTG CAGCGCCTGTTCCGGGTGGCGTCCAAAACACATGGGGACCTTCTGGAGGTAAATCTGCAGAATGGCATTTTGTTTGTGAATTCTCGGATC GACCGCGAGGAGCTGTGCGGGCAGAGCGCGGAGTGCAGCATCCACCTGGAGGTGATCGTGGACAGGCCGCTGCAGGTTTTCCATGTGAAC GTGGAGGTGAAGGACATTAACGACAACCCGCCGGTGTTCTCGCTCAGAGAACAAAAGCTGCTGATTGCGGAATCTAAGCAATCGGACTCG CGTTTTCCACTAGAGGGAGCTTCTGATGCTGACATTGAAGAGAATGCTCTATTGACCTACAGGCTAAGTAAAAATGAGTATTTTTCTTTA GATTCACCAACAAATGGTAAGCAGATTAAAAGACTGTCACTTATTTTAAAGAAGTCTCTGGATAGAGAGAAAACTCCGGAACTTAATTTG CTGCTAACAGCTACAGACGGGGGAAAACCAGAGCTTACTGGCACCGTTCGGCTGTTAGTCCAAGTCTTGGATGTCAACGACAATGATCCA GAGTTTGATAAATCAGAATATAAGGTGAGCCTTATGGAAAATGCTGCTAAAGAAACTCTTGTGCTCAAACTAAACGCCACAGACCGAGAC GAAGGAGTCAATGGAGAGGTAACATACTCCTTAATGTCAATTAAGCCCAATGGAAGACACTTATTTACACTAGATCAAAATAATGGAGAA GTGAGGGTCAATGGAACTTTAGATTATGAAGAAAACAAGTTTTATAAAATTGAAGTACAGGCTACAGATAAGGGGACTCCCCCAATGGCA GGTCACTGTACAGTCTGGGTGGAAATCTTGGACACCAACGATAACTCTCCTGAAGTCGCCGTGACTTCCTTGTCCCTCCCAGTACGAGAG GACGCTCAGCCCAGCACGGTCATTGCCCTGATCAGCGTGTCTGACCGTGACTCAGGTGTCAACGGACAGGTGACCTGCTCGCTGACGCCC CACGTTCCCTTCAAGCTGGTGTCCACCTTCAAGAATTACTACTCGTTGGTGCTGGACAGCGCCCTGGACCGCGAGAACGTGTGGGCCTAT GAACTGGTGGTGACTGCGCGGGATGGGGGTTCGCCTTCTCTGTGGGCCACGGCCAGGGTATCCGTGGAGGTGGCCGACGTGAACGACAAT GCGCCTGCGTTCGCACAGCCCGAGTACACCGTGTTCGTGAAGGAGAACAACCCACCAGGCTGCCACATCTTCACAGTGTCGGCGCGGGAC GCGGACGCGCAGGAGAACGCGCTGGTGTCCTACTCGCTGGTGGAGCGGCGGTTGGGCGACCGCGCGCTGTCGAGCTACGTGTCGGTGCAC GCGGAGAGCGGCAAGGTGTACGCGCTGCAGCCGTTGGACCACGAGGAGCTGGAGCTGCTACAGTTCCAGGTGAGCGCGCGCGATGCGGGC GTGCCGCCTCTGAGCAGCAACGTGACGCTGCAGGTGTTCGTGCTGGACGAGAACGACAACGCGCCGGCACTGCTGGCGACTCAGGCTGGC AGCGCGGGAGGCGCAGTTAACAAGCTAGTACCGCGGTCGGTGGGTGCGGGCCACGTGGTGGCGAAGGTGCGCGCAGTGGATGCGGACTCA GGCTACAACGCGTGGCTTTCATATGAATTGCAGCCGGCGGCGGGCGGCTCGCGCATCCCGTTCCGCGTGGGGCTGTACACGGGCGAGATA AGCACAACGCGTGCCCTGGACGAGGCAGACTCGCCGCGCCACCGACTTCTAGTACTGGTGAAGGATCACGGTGAGCCGGCGCTGACGGCC ACGGCCACCGTGCTGGTGTCGTTGGTGGAGAGCGGACAGGCGCCAAAGGCCTCTTCCCGGACTTTGGCGGGCGCCGCGAGCCCAGAGGCT GCGCTGGTGGATGTCAACGTGTACCTGATCATCGCCATCTGCGTGGTGTCCAGCCTCCTGGTACTCACGCTGCTGCTGTATACGGCGCTG TGGTGGTCGGCAACGCCCACTGAGGGCGCGTGCGCGCCGGGGAAGCCCACGCTGGTGTGCTCCCGCGCGGTGGGGAGCTGGTCATACTCG CAGCAGAGGCGGCAGAGGGTGTGCTCTGAGGAGGGCCCACCTAAGACGGACCTCATGGCCTTCAGCCCCAGTCTTCCTCTAGGTCTGAAT AAAGAGGAGGAAGGGGAAAGACAGGAGCCAGGGTCAAATCACCCCGGACAGGAACTGTTGAAAAAATGTCATCAATGTGTCGAAACCATT GTGAAGGCTAAAGACCAGCAAGCTGCAGAAGCAAATAAGAATGCGAGTATTCTTTTAAAGGAACTTGATCTGGAAAAGTCAAGAGAAGAG AGCAGAAAGCAGGCTCTTGCTGCTAAAAGAGAAAAAAGAAAAGAAAAGAGAAAAAAGAAAAAAGAGGAACAGAAAAGGAAACAGGAAGAA GATGAAGAAAACAAACCTAAGGAGAATTCGGAACTACCAGAGGATGAAGATGAAGAGGAGAATGATGAAGATGTGGAGCAAGAAGTTCCC ATAGAACCTCCTAGTGCAACCACCACCACTACGATTGGAATCTCTGCAACATCTGCAACATTCACAAATGTGTTTGGGAAAAAAAGGGCC AATGTGGTGACAACTCCCAGCACCAATCGGAAAAATAAGAAGAACAAAACAAAAGAAACCCCTCCTACAGCACATTTAATTTTACCAGAA CAACATATGTCTTTAGCCCAACAAAAGGCAGATAAAAATAAAATAAATGGAGAACCTAGAGGTGGTGGTGCAGGTGGGAATAGTGATTCA GATAACTTGGACAGCACAGACTGCAACAGTGAGAGTAGCAGTGGTGGTAAAAGCCAAGAGTTAAATTTTGTGATGGATGTGAATTCCTCT AAATACCCCTCACTGCTCCTTCATTCCCAAGAAGAAAAGACAAGTACTGCTACTTCCAAAACTCAGACACGACTTGAAGGTGAAGTGACT CCTAATTCCTTGTCAACCAGCTACAAGACAGTGTCATTGCCATTAAGCTCTCCAAACATAAAGCTGAATCTCACTAGCCCTAAAAGGGGT CAGAAAAGAGAAGAAGGGTGGAAAGAAGTTGTACGAAGGTCAAAGAAATTGTCTGTTCCAGCCTCAGTGGTGTCGAGGATAATGGGAAGA GGAGGATGCAACATCACTGCAATACAGGATGTTACTGGTGCCCATATTGATGTGGATAAACAAAAAGATAAGAATGGCGAGAGAATGATC ACAATAAGGGGTGGCACAGAATCAACAAGATATGCAGTTCAACTAATCAATGCACTCATTCAAGATCCTGCTAAGGAACTGGAAGACTTG ATTCCTAAAAATCATATCAGAACACCTGCCAGCACCAAATCAATTCATGCTAACTTCTCATCTGGAGTAGGTACCACAGCAGCTTCCAGT AAAAATGCATTTCCTTTGGGTGCTCCAACTCTTGTAACTTCACAGGCAACAACGTTATCTACGTTCCAGCCCGCTAATAAACTTAATAAG AATGTTCCAACAAATGTACGTTCTTCTTTCCCAGTTTCTCTACCCTTAGCTTATCCTCACCCTCATTTTGCCCTGCTGGCTGCTCAAACT ATGCAACAGATTCGGCATCCTCGCTTACCCATGGCCCAGTTTGGAGGAACCTTCTCACCTTCTCCTAACACATGGGGACCATTCCCAGTG AGACCTGTGAATCCTGGCAACACAAATAGCTCTCCAAAGCATAATAACACAAGCCGTCTACCTAACCAGAACGGGACTGTTTTACCCTCA GAGTCTGCTGGACTAGCTACTGCCAGTTGTCCTATCACTGTCTCTTCTGTAGTTGCTGCCAGTCAGCAACTGTGTGTCACTAATACCCGG ACTCCTTCATCAGTCAGAAAGCAGTTGTTTGCCTGTGTGCCTAAGACAAGTCCTCCAGCAACAGTGATTTCTTCTGTGACAAGCACTTGT AGTTCCCTGCCTTCTGTCTCCTCTGCACCTATCACTAGCGGGCAAGCTCCCACCACATTTCTACCTGCAAGTACTTCTCAAGCACAGCTT TCTTCACAAAAGATGGAGTCTTTCTCTGCTGTGCCACCCACCAAAGAGAAAGTGTCCACACAGGACCAGCCCATGGCAAACCTATGTACC CCATCTTCAACTGCAAACAGTTGCAGTAGCTCTGCCAGCAACACCCCGGGAGCTCCAGAAACTCACCCATCCAGTAGTCCCACTCCTACT TCCAGTAACACACAAGAGGAGGCACAGCCATCCAGTGTGTCTGATTTAAGTCCTATGTCAATGCCTTTTGCATCTAACTCAGAACCTGCT CCATTGACTTTGACATCACCCAGAATGGTTGCTGCTGATAATCAGGACACCAGTAATTTACCTCAGTTAGCTGTACCAGCACCTCGAGTT TCTCATCGAATGCAGCCCAGAGGTTCTTTTTACTCCATGGTACCAAATGCAACTATTCACCAGGATCCCCAGTCTATTTTTGTTACGAAT CCAGTTACTTTAACACCACCTCAAGGCCCACCAGCTGCAGTGCAGCTTTCTTCAGCTGTGAACATTATGAATGGTTCTCAGATGCACATA AACCCAGCAAATAAGTCTTTGCCACCTACATTTGGCCCAGCCACACTTTTCAATCACTTCAGCAGTCTTTTTGATAGTAGTCAGGTGCCA GCTAACCAGGGCTGGGGAGATGGTCCACTGTCCTCACGAGTTGCTACAGATGCCTCTTTCACTGTTCAGTCAGCGTTCCTGGGTAACTCA GTGCTTGGACACTTGGAAAACATGCACCCTGATAACTCAAAGGCACCTGGCTTCAGACCACCTTCCCAGCGAGTTTCTACTAGTCCAGTT GGGTTACCATCCATTGACCCATCAGGCAGCTCCCCATCTTCCTCTTCTGCTCCTCTGGCAAGTTTTTCCGGCATACCAGGAACAAGGGTT TTCCTGCAAGGGCCAGCTCCTGTTGGGACTCCTAGTTTCAACAGACAACATTTTTCTCCCCATCCTTGGACAAGCGCCTCAAACTCATCC ACTTCTGCCCCACCAACGTTGGGCCAACCAAAAGGAGTCAGTGCCAGTCAAGATCGAAAGATACCTCCCCCAATTGGAACAGAGAGACTG GCCCGAATTCGGCAAGGAGGGTCTGTTGCACAAGCCCCGGCGGGGACCAGTTTTGTCGCTCCCGTTGGACACAGTGGAATCTGGTCATTT GGTGTCAATGCTGTGTCAGAAGGCTTATCAGGTTGGTCGCAATCTGTGATGGGGAACCATCCAATGCATCAACAATTATCAGACCCAAGC ACATTCTCCCAACATCAGCCAATGGAGAGAGATGATTCTGGAATGGTAGCCCCCTCTAACATTTTTCATCAGCCTATGGCAAGTGGTTTT GTGGATTTTTCTAAAGGTCTGCCAATTTCCATGTATGGAGGCACCATAATACCCTCTCATCCTCAGCTTGCTGATGTTCCAGGAGGCCCT CTGTTTAATGGACTTCACAATCCAGATCCTGCTTGGAACCCTATGATAAAAGTTATCCAAAATTCAACTGAATGCACTGATGCCCAGCAG GCCAGTCTGCTTCCTTCAGTCCCTGCTCTCAAAGGGGAAATCCCATCACCTCAGCTAACCAGACCGAAGAAGAGAATTGGACGGCCGATG GTGGCCTCTCCTAACCAGAGGCACCAGGATCATCTACGACCGAAAGTTCCTGCTGGAGTGCAAGAACTCACCCATTGCCCGGACACCCCC CTGCTGCCTCCCTCAGATTCCCGGGGTCACAACTCCTCCAACAGCCCCTCTCTCCAAGCTGGAGGAGCTGAAGGAGCAGGAGACAGAGGA AGAGATACCCGATGACGCACAATTTGAAATGGACATCTAATCCAGTGCAGATGACCTGGCATGTGGAGTTACAGAGGGATCCCTCATGCC ACTGCTGCCACCACCTCTTCCTGGGGCATCCAAAGGCCAGCTGGCCTCATCTAATCTGGAAGGGAGTGACTTGTTAGTTCCAGGCCTCCT TTAGTTCTGAGGCAGCTAGACCAGGGATAGGAGTGGGCAACTTGCCAAGCCCTTAACTCTACTTCCTCTTCAGTCTGTGGTACTCCTCCT 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FusionGenePPI for PCDHA11_ANKHD1 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
PCDHA11 | PCDHA10, PCDHA3, PCDHA4, PCDHA12 | ANKHD1 | POLR2M, UNC93B1, SIRT7, CAND1, ATXN1, ATXN1L, VCP, NFKBIE, ZNF346, ADARB2, MOV10, NXF1, HOXC4, MAGEA1, ZC3H3, FOSL2, SFRP4, RBM23, SEC16A, CDT1, SKA3, FOS, FOXQ1, STX11, FGF8, TRIM41, FGF3, SIX2, HOXD4, IRF9, AKAP17A, ZNF263, ZNF433, IL17RA, H2AFX, NOB1, C6orf141, TULP3, CERKL, CDX1, TRIM25 |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for PCDHA11_ANKHD1 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for PCDHA11_ANKHD1 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |