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Fusion gene ID: 26149 |
FusionGeneSummary for PCBP2_CCT5 |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: PCBP2_CCT5 | Fusion gene ID: 26149 | Hgene | Tgene | Gene symbol | PCBP2 | CCT5 | Gene ID | 5094 | 22948 |
| Gene name | poly(rC) binding protein 2 | chaperonin containing TCP1 subunit 5 | |
| Synonyms | HNRNPE2|HNRPE2|hnRNP-E2 | CCT-epsilon|CCTE|HEL-S-69|PNAS-102|TCP-1-epsilon | |
| Cytomap | 12q13.13 | 5p15.2 | |
| Type of gene | protein-coding | protein-coding | |
| Description | poly(rC)-binding protein 2alpha-CP2heterogeneous nuclear ribonucleoprotein E2heterogenous nuclear ribonucleoprotein E2hnRNP E2 | T-complex protein 1 subunit epsilonchaperonin containing TCP1, subunit 5 (epsilon)epididymis secretory protein Li 69 | |
| Modification date | 20180522 | 20180523 | |
| UniProtAcc | Q15366 | P48643 | |
| Ensembl transtripts involved in fusion gene | ENST00000359282, ENST00000603815, ENST00000437231, ENST00000447282, ENST00000549863, ENST00000359462, ENST00000546463, ENST00000552296, ENST00000552819, ENST00000455667, ENST00000439930, ENST00000548933, ENST00000541275, | ENST00000280326, ENST00000503026, ENST00000515390, ENST00000515676, ENST00000506600, | |
| Fusion gene scores | * DoF score | 17 X 15 X 8=2040 | 49 X 6 X 16=4704 |
| # samples | 20 | 53 | |
| ** MAII score | log2(20/2040*10)=-3.35049724708413 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(53/4704*10)=-3.1498237953858 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
| Context | PubMed: PCBP2 [Title/Abstract] AND CCT5 [Title/Abstract] AND fusion [Title/Abstract] | ||
| Functional or gene categories assigned by FusionGDB annotation | |||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Hgene | PCBP2 | GO:0039694 | viral RNA genome replication | 12414943 |
| Hgene | PCBP2 | GO:0075522 | IRES-dependent viral translational initiation | 12414943 |
| Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| TCGA | RV | CESC | TCGA-BI-A0VS-01A | PCBP2 | chr12 | 53873616 | + | CCT5 | chr5 | 10250033 | + |
| * LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
| Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| In-frame | ENST00000359282 | ENST00000280326 | PCBP2 | chr12 | 53873616 | + | CCT5 | chr5 | 10250033 | + |
| 5CDS-intron | ENST00000359282 | ENST00000503026 | PCBP2 | chr12 | 53873616 | + | CCT5 | chr5 | 10250033 | + |
| 5CDS-intron | ENST00000359282 | ENST00000515390 | PCBP2 | chr12 | 53873616 | + | CCT5 | chr5 | 10250033 | + |
| 5CDS-intron | ENST00000359282 | ENST00000515676 | PCBP2 | chr12 | 53873616 | + | CCT5 | chr5 | 10250033 | + |
| 5CDS-intron | ENST00000359282 | ENST00000506600 | PCBP2 | chr12 | 53873616 | + | CCT5 | chr5 | 10250033 | + |
| 3UTR-3CDS | ENST00000603815 | ENST00000280326 | PCBP2 | chr12 | 53873616 | + | CCT5 | chr5 | 10250033 | + |
| 3UTR-intron | ENST00000603815 | ENST00000503026 | PCBP2 | chr12 | 53873616 | + | CCT5 | chr5 | 10250033 | + |
| 3UTR-intron | ENST00000603815 | ENST00000515390 | PCBP2 | chr12 | 53873616 | + | CCT5 | chr5 | 10250033 | + |
| 3UTR-intron | ENST00000603815 | ENST00000515676 | PCBP2 | chr12 | 53873616 | + | CCT5 | chr5 | 10250033 | + |
| 3UTR-intron | ENST00000603815 | ENST00000506600 | PCBP2 | chr12 | 53873616 | + | CCT5 | chr5 | 10250033 | + |
| 3UTR-3CDS | ENST00000437231 | ENST00000280326 | PCBP2 | chr12 | 53873616 | + | CCT5 | chr5 | 10250033 | + |
| 3UTR-intron | ENST00000437231 | ENST00000503026 | PCBP2 | chr12 | 53873616 | + | CCT5 | chr5 | 10250033 | + |
| 3UTR-intron | ENST00000437231 | ENST00000515390 | PCBP2 | chr12 | 53873616 | + | CCT5 | chr5 | 10250033 | + |
| 3UTR-intron | ENST00000437231 | ENST00000515676 | PCBP2 | chr12 | 53873616 | + | CCT5 | chr5 | 10250033 | + |
| 3UTR-intron | ENST00000437231 | ENST00000506600 | PCBP2 | chr12 | 53873616 | + | CCT5 | chr5 | 10250033 | + |
| 3UTR-3CDS | ENST00000447282 | ENST00000280326 | PCBP2 | chr12 | 53873616 | + | CCT5 | chr5 | 10250033 | + |
| 3UTR-intron | ENST00000447282 | ENST00000503026 | PCBP2 | chr12 | 53873616 | + | CCT5 | chr5 | 10250033 | + |
| 3UTR-intron | ENST00000447282 | ENST00000515390 | PCBP2 | chr12 | 53873616 | + | CCT5 | chr5 | 10250033 | + |
| 3UTR-intron | ENST00000447282 | ENST00000515676 | PCBP2 | chr12 | 53873616 | + | CCT5 | chr5 | 10250033 | + |
| 3UTR-intron | ENST00000447282 | ENST00000506600 | PCBP2 | chr12 | 53873616 | + | CCT5 | chr5 | 10250033 | + |
| intron-3CDS | ENST00000549863 | ENST00000280326 | PCBP2 | chr12 | 53873616 | + | CCT5 | chr5 | 10250033 | + |
| intron-intron | ENST00000549863 | ENST00000503026 | PCBP2 | chr12 | 53873616 | + | CCT5 | chr5 | 10250033 | + |
| intron-intron | ENST00000549863 | ENST00000515390 | PCBP2 | chr12 | 53873616 | + | CCT5 | chr5 | 10250033 | + |
| intron-intron | ENST00000549863 | ENST00000515676 | PCBP2 | chr12 | 53873616 | + | CCT5 | chr5 | 10250033 | + |
| intron-intron | ENST00000549863 | ENST00000506600 | PCBP2 | chr12 | 53873616 | + | CCT5 | chr5 | 10250033 | + |
| In-frame | ENST00000359462 | ENST00000280326 | PCBP2 | chr12 | 53873616 | + | CCT5 | chr5 | 10250033 | + |
| 5CDS-intron | ENST00000359462 | ENST00000503026 | PCBP2 | chr12 | 53873616 | + | CCT5 | chr5 | 10250033 | + |
| 5CDS-intron | ENST00000359462 | ENST00000515390 | PCBP2 | chr12 | 53873616 | + | CCT5 | chr5 | 10250033 | + |
| 5CDS-intron | ENST00000359462 | ENST00000515676 | PCBP2 | chr12 | 53873616 | + | CCT5 | chr5 | 10250033 | + |
| 5CDS-intron | ENST00000359462 | ENST00000506600 | PCBP2 | chr12 | 53873616 | + | CCT5 | chr5 | 10250033 | + |
| intron-3CDS | ENST00000546463 | ENST00000280326 | PCBP2 | chr12 | 53873616 | + | CCT5 | chr5 | 10250033 | + |
| intron-intron | ENST00000546463 | ENST00000503026 | PCBP2 | chr12 | 53873616 | + | CCT5 | chr5 | 10250033 | + |
| intron-intron | ENST00000546463 | ENST00000515390 | PCBP2 | chr12 | 53873616 | + | CCT5 | chr5 | 10250033 | + |
| intron-intron | ENST00000546463 | ENST00000515676 | PCBP2 | chr12 | 53873616 | + | CCT5 | chr5 | 10250033 | + |
| intron-intron | ENST00000546463 | ENST00000506600 | PCBP2 | chr12 | 53873616 | + | CCT5 | chr5 | 10250033 | + |
| intron-3CDS | ENST00000552296 | ENST00000280326 | PCBP2 | chr12 | 53873616 | + | CCT5 | chr5 | 10250033 | + |
| intron-intron | ENST00000552296 | ENST00000503026 | PCBP2 | chr12 | 53873616 | + | CCT5 | chr5 | 10250033 | + |
| intron-intron | ENST00000552296 | ENST00000515390 | PCBP2 | chr12 | 53873616 | + | CCT5 | chr5 | 10250033 | + |
| intron-intron | ENST00000552296 | ENST00000515676 | PCBP2 | chr12 | 53873616 | + | CCT5 | chr5 | 10250033 | + |
| intron-intron | ENST00000552296 | ENST00000506600 | PCBP2 | chr12 | 53873616 | + | CCT5 | chr5 | 10250033 | + |
| intron-3CDS | ENST00000552819 | ENST00000280326 | PCBP2 | chr12 | 53873616 | + | CCT5 | chr5 | 10250033 | + |
| intron-intron | ENST00000552819 | ENST00000503026 | PCBP2 | chr12 | 53873616 | + | CCT5 | chr5 | 10250033 | + |
| intron-intron | ENST00000552819 | ENST00000515390 | PCBP2 | chr12 | 53873616 | + | CCT5 | chr5 | 10250033 | + |
| intron-intron | ENST00000552819 | ENST00000515676 | PCBP2 | chr12 | 53873616 | + | CCT5 | chr5 | 10250033 | + |
| intron-intron | ENST00000552819 | ENST00000506600 | PCBP2 | chr12 | 53873616 | + | CCT5 | chr5 | 10250033 | + |
| 3UTR-3CDS | ENST00000455667 | ENST00000280326 | PCBP2 | chr12 | 53873616 | + | CCT5 | chr5 | 10250033 | + |
| 3UTR-intron | ENST00000455667 | ENST00000503026 | PCBP2 | chr12 | 53873616 | + | CCT5 | chr5 | 10250033 | + |
| 3UTR-intron | ENST00000455667 | ENST00000515390 | PCBP2 | chr12 | 53873616 | + | CCT5 | chr5 | 10250033 | + |
| 3UTR-intron | ENST00000455667 | ENST00000515676 | PCBP2 | chr12 | 53873616 | + | CCT5 | chr5 | 10250033 | + |
| 3UTR-intron | ENST00000455667 | ENST00000506600 | PCBP2 | chr12 | 53873616 | + | CCT5 | chr5 | 10250033 | + |
| intron-3CDS | ENST00000439930 | ENST00000280326 | PCBP2 | chr12 | 53873616 | + | CCT5 | chr5 | 10250033 | + |
| intron-intron | ENST00000439930 | ENST00000503026 | PCBP2 | chr12 | 53873616 | + | CCT5 | chr5 | 10250033 | + |
| intron-intron | ENST00000439930 | ENST00000515390 | PCBP2 | chr12 | 53873616 | + | CCT5 | chr5 | 10250033 | + |
| intron-intron | ENST00000439930 | ENST00000515676 | PCBP2 | chr12 | 53873616 | + | CCT5 | chr5 | 10250033 | + |
| intron-intron | ENST00000439930 | ENST00000506600 | PCBP2 | chr12 | 53873616 | + | CCT5 | chr5 | 10250033 | + |
| intron-3CDS | ENST00000548933 | ENST00000280326 | PCBP2 | chr12 | 53873616 | + | CCT5 | chr5 | 10250033 | + |
| intron-intron | ENST00000548933 | ENST00000503026 | PCBP2 | chr12 | 53873616 | + | CCT5 | chr5 | 10250033 | + |
| intron-intron | ENST00000548933 | ENST00000515390 | PCBP2 | chr12 | 53873616 | + | CCT5 | chr5 | 10250033 | + |
| intron-intron | ENST00000548933 | ENST00000515676 | PCBP2 | chr12 | 53873616 | + | CCT5 | chr5 | 10250033 | + |
| intron-intron | ENST00000548933 | ENST00000506600 | PCBP2 | chr12 | 53873616 | + | CCT5 | chr5 | 10250033 | + |
| intron-3CDS | ENST00000541275 | ENST00000280326 | PCBP2 | chr12 | 53873616 | + | CCT5 | chr5 | 10250033 | + |
| intron-intron | ENST00000541275 | ENST00000503026 | PCBP2 | chr12 | 53873616 | + | CCT5 | chr5 | 10250033 | + |
| intron-intron | ENST00000541275 | ENST00000515390 | PCBP2 | chr12 | 53873616 | + | CCT5 | chr5 | 10250033 | + |
| intron-intron | ENST00000541275 | ENST00000515676 | PCBP2 | chr12 | 53873616 | + | CCT5 | chr5 | 10250033 | + |
| intron-intron | ENST00000541275 | ENST00000506600 | PCBP2 | chr12 | 53873616 | + | CCT5 | chr5 | 10250033 | + |
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FusionProtFeatures for PCBP2_CCT5 |
| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| PCBP2 | CCT5 |
| Molecular chaperone; assists the folding of proteinsupon ATP hydrolysis. As part of the BBS/CCT complex may play arole in the assembly of BBSome, a complex involved in ciliogenesisregulating transports vesicles to the cilia. Known to play a role,in vitro, in the folding of actin and tubulin.{ECO:0000269|PubMed:20080638}. |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
| - In-frame and retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | PCBP2 | chr12:53873616 | chr5:10250033 | ENST00000359282 | + | 14 | 14 | 13_75 | 460 | 332 | Domain | KH 1 |
| Hgene | PCBP2 | chr12:53873616 | chr5:10250033 | ENST00000359282 | + | 14 | 14 | 287_351 | 460 | 332 | Domain | KH 3 |
| Hgene | PCBP2 | chr12:53873616 | chr5:10250033 | ENST00000359282 | + | 14 | 14 | 97_162 | 460 | 332 | Domain | KH 2 |
| Hgene | PCBP2 | chr12:53873616 | chr5:10250033 | ENST00000359462 | + | 15 | 15 | 13_75 | 497 | 367 | Domain | KH 1 |
| Hgene | PCBP2 | chr12:53873616 | chr5:10250033 | ENST00000359462 | + | 15 | 15 | 287_351 | 497 | 367 | Domain | KH 3 |
| Hgene | PCBP2 | chr12:53873616 | chr5:10250033 | ENST00000359462 | + | 15 | 15 | 97_162 | 497 | 367 | Domain | KH 2 |
| - In-frame and not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | >PCBP2 | chr12:53873616 | chr5:10250033 | ENST00000439930 | + | 1 | 14 | 13_75 | -8 | 366 | Domain | KH 1 |
| Hgene | >PCBP2 | chr12:53873616 | chr5:10250033 | ENST00000439930 | + | 1 | 14 | 287_351 | -8 | 366 | Domain | KH 3 |
| Hgene | >PCBP2 | chr12:53873616 | chr5:10250033 | ENST00000439930 | + | 1 | 14 | 97_162 | -8 | 366 | Domain | KH 2 |
| Hgene | >PCBP2 | chr12:53873616 | chr5:10250033 | ENST00000447282 | + | 1 | 14 | 13_75 | -117 | 336 | Domain | KH 1 |
| Hgene | >PCBP2 | chr12:53873616 | chr5:10250033 | ENST00000447282 | + | 1 | 14 | 287_351 | -117 | 336 | Domain | KH 3 |
| Hgene | >PCBP2 | chr12:53873616 | chr5:10250033 | ENST00000447282 | + | 1 | 14 | 97_162 | -117 | 336 | Domain | KH 2 |
| Hgene | >PCBP2 | chr12:53873616 | chr5:10250033 | ENST00000546463 | + | 1 | 15 | 13_75 | -43 | 363 | Domain | KH 1 |
| Hgene | >PCBP2 | chr12:53873616 | chr5:10250033 | ENST00000546463 | + | 1 | 15 | 287_351 | -43 | 363 | Domain | KH 3 |
| Hgene | >PCBP2 | chr12:53873616 | chr5:10250033 | ENST00000546463 | + | 1 | 15 | 97_162 | -43 | 363 | Domain | KH 2 |
| Hgene | >PCBP2 | chr12:53873616 | chr5:10250033 | ENST00000548933 | + | 1 | 13 | 13_75 | -6 | 336 | Domain | KH 1 |
| Hgene | >PCBP2 | chr12:53873616 | chr5:10250033 | ENST00000548933 | + | 1 | 13 | 287_351 | -6 | 336 | Domain | KH 3 |
| Hgene | >PCBP2 | chr12:53873616 | chr5:10250033 | ENST00000548933 | + | 1 | 13 | 97_162 | -6 | 336 | Domain | KH 2 |
| Hgene | >PCBP2 | chr12:53873616 | chr5:10250033 | ENST00000552296 | + | 1 | 15 | 13_75 | -28 | 362 | Domain | KH 1 |
| Hgene | >PCBP2 | chr12:53873616 | chr5:10250033 | ENST00000552296 | + | 1 | 15 | 287_351 | -28 | 362 | Domain | KH 3 |
| Hgene | >PCBP2 | chr12:53873616 | chr5:10250033 | ENST00000552296 | + | 1 | 15 | 97_162 | -28 | 362 | Domain | KH 2 |
| Hgene | >PCBP2 | chr12:53873616 | chr5:10250033 | ENST00000603815 | + | 1 | 15 | 13_75 | -117 | 366 | Domain | KH 1 |
| Hgene | >PCBP2 | chr12:53873616 | chr5:10250033 | ENST00000603815 | + | 1 | 15 | 287_351 | -117 | 366 | Domain | KH 3 |
| Hgene | >PCBP2 | chr12:53873616 | chr5:10250033 | ENST00000603815 | + | 1 | 15 | 97_162 | -117 | 366 | Domain | KH 2 |
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FusionGeneSequence for PCBP2_CCT5 |
| For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
| * Fusion amino acid sequences. |
| >In-frame_PCBP2_ENST00000359282_chr12_53873616_+_CCT5_ENST00000280326_chr5_10250033_+_1142aa MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNS TAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRP KPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIG RQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSSETGGMGSSXNNADSSIIPFCCSPPPMIHLCSFXTVSD SRFXIVCKFSVSTHFIIHSXFFNXSVLIPFSVQLLMLRSIFSFISFSLVFFFWLMNFSVCHGNVRVEYXYISVXFCNVRNFSKKLKDGLE LFLCEXKLDAKKKKNRKWVLPSSRSRSAKKXRNSALSQXIPPWDPLSRNYQWXRFKKXQIQSALDLCVLRFPLSVFKPPPPRLPGXXKFP KAADSRRYCLAXNXSQXKHKSRASCAARAQAFGPSREREVHSRFRSGLRRLGGSNSGCCTMASMGTLAFDEYGRPFLIIKDQDRKSRLMG LEALKSHIMAAKAVANTMRTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEA EQLLDRGIHPIRIADGYEQAARVAIEHLDKISDSVLVDIKDTEPLIQTAKTTLGSKVVNSCHRQMAEIAVNAVLTVADMERRDVDFELIK VEGKVGGRLEDTKLIKGVIVDKDFSHPQMPKKVEDAKIAILTCPFEPPKPKTKHKLDVTSVEDYKALQKYEKEKFEEMIQQIKETGANLA ICQWGFDDEANHLLLQNNLPAVRWVGGPEIELIAIATGGRIVPRFSELTAEKLGFAGLVQEISFGTTKDKMLVIEQCKNSRAVTIFIRGG NKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADKCPTLEQYAMRAFADALEVIPMALSENSGMNPIQTMTEVRAR >In-frame_PCBP2_ENST00000359462_chr12_53873616_+_CCT5_ENST00000280326_chr5_10250033_+_1179aa MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNS TAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTI PYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIES SSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSSET GGMGSSXNNADSSIIPFCCSPPPMIHLCSFXTVSDSRFXIVCKFSVSTHFIIHSXFFNXSVLIPFSVQLLMLRSIFSFISFSLVFFFWLM NFSVCHGNVRVEYXYISVXFCNVRNFSKKLKDGLELFLCEXKLDATVKKKKNRKWVLPSSRSRSAKKXRNSALSQXIPPWDPLSRNYQWX RFKKXQIQSALDLCVLRFPLSVFKPPPPRLPGXXKFPKAADSRRYCLAXNXSQXKHKSRASCAARAQAFGPSREREVHSRFRSGLRRLGG SNSGCCTMASMGTLAFDEYGRPFLIIKDQDRKSRLMGLEALKSHIMAAKAVANTMRTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDV DHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARVAIEHLDKISDSVLVDIKDTEPLIQTAKTTL GSKVVNSCHRQMAEIAVNAVLTVADMERRDVDFELIKVEGKVGGRLEDTKLIKGVIVDKDFSHPQMPKKVEDAKIAILTCPFEPPKPKTK HKLDVTSVEDYKALQKYEKEKFEEMIQQIKETGANLAICQWGFDDEANHLLLQNNLPAVRWVGGPEIELIAIATGGRIVPRFSELTAEKL GFAGLVQEISFGTTKDKMLVIEQCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADKCPTL EQYAMRAFADALEVIPMALSENSGMNPIQTMTEVRARQVKEMNPALGIDCLHKGTNDMKQQHVIETLIGKKQQISLATQMVRMILKIDDI |
| * Fusion transcript sequences (only coding sequence (CDS) region). |
| >In-frame_PCBP2_ENST00000359282_chr12_53873616_+_CCT5_ENST00000280326_chr5_10250033_+_3426nt ATGGACACCGGTGTGATTGAAGGTGGATTAAATGTCACTCTCACCATCCGGCTACTTATGCATGGAAAGGAAGTTGGCAGTATCATCGGA AAGAAAGGAGAATCAGTTAAGAAGATGCGCGAGGAGAGTGGTGCACGTATCAACATCTCAGAAGGGAATTGTCCTGAGAGAATTATCACT TTGGCTGGACCCACTAATGCCATCTTCAAAGCCTTTGCTATGATCATTGACAAACTGGAAGAGGACATAAGCAGCTCTATGACCAATAGC ACAGCTGCCAGTAGACCCCCGGTCACCCTGAGGCTGGTGGTCCCTGCTAGTCAGTGTGGCTCTCTCATTGGAAAAGGTGGATGCAAGATC AAGGAAATACGAGAGAGTACAGGGGCTCAGGTCCAGGTGGCAGGGGATATGCTACCCAACTCAACTGAGCGGGCCATCACTATTGCTGGC ATTCCACAATCCATCATTGAGTGTGTCAAACAGATCTGCGTGGTCATGTTGGAGTCCCCCCCGAAGGGCGTGACCATCCCGTACCGGCCC AAGCCGTCCAGCTCTCCGGTCATCTTTGCAGGTGGTCAGGCCTATACCATTCAAGGACAGTATGCCATTCCACAGCCAGATTTGACCAAG CTGCACCAGTTGGCAATGCAACAGTCTCATTTTCCCATGACGCATGGCAACACCGGATTCAGTGGCATTGAATCCAGCTCTCCAGAGGTG AAAGGCTATTGGGCAGGTTTGGATGCATCTGCTCAGACTACTTCTCATGAACTCACCATTCCAAACGATTTGATTGGCTGCATAATCGGG CGTCAAGGCGCCAAAATCAATGAGATCCGTCAGATGTCTGGGGCGCAGATCAAAATTGCGAACCCAGTGGAAGGATCTACTGATAGGCAG GTTACCATCACTGGATCTGCTGCCAGCATTAGCCTGGCTCAATATCTAATCAATGTCAGGCTTTCCTCGGAGACGGGTGGCATGGGGAGC AGCTAGAACAATGCAGATTCATCCATAATCCCTTTCTGCTGTTCACCACCACCCATGATCCATCTGTGTAGTTTCTGAACAGTCAGCGAT TCCAGGTTTTAAATAGTTTGTAAATTTTCAGTTTCTACACACTTTATCATCCACTCGTGATTTTTTAATTAAAGCGTTTTAATTCCTTTC TCTGTTCAGCTGTTGATGCTGAGATCCATATTTAGTTTTATAAGCTTCTCCCTGGTTTTTTTTTTTTGGCTCATGAATTTTTCTGTTTGT CATGGAAATGTAAGAGTGGAATATTAATACATTTCAGTTTAGTTCTGTAATGTCAGGAATTTTTCAAAAAAATTAAAAGATGGACTGGAG CTTTTTCTTTGTGAATAGAAACTGGATGCCAAAAAAAAAAAAAACCGGAAATGGGTCCTACCATCTTCTCGGAGCCGGAGTGCGAAGAAA TAAAGAAATAGTGCTTTAAGTCAATGAATTCCTCCTTGGGACCCACTATCGAGAAACTATCAGTGGTAACGTTTTAAAAAATGACAAATT CAATCTGCTCTTGACTTGTGTGTCCTAAGATTTCCACTAAGTGTCTTCAAACCTCCCCCTCCCCGGCTTCCTGGATAATAGAAGTTCCCG AAGGCCGCCGATTCCAGAAGATACTGTCTGGCGTGAAATTAGTCTCAGTAGAAACATAAGTCCCGCGCGTCTTGTGCTGCGCGTGCGCAA GCTTTTGGGCCCTCCCGAGAAAGGGAAGTGCATTCTCGCTTCCGTAGCGGTCTCCGCCGGTTGGGGGGAAGTAATTCCGGTTGTTGCACC ATGGCGTCCATGGGGACCCTCGCCTTCGATGAATATGGGCGCCCTTTCCTCATCATCAAGGATCAGGACCGCAAGTCCCGTCTTATGGGA CTTGAGGCCCTCAAGTCTCATATAATGGCAGCAAAGGCTGTAGCAAATACAATGAGAACATCACTTGGACCAAATGGGCTTGATAAGATG ATGGTGGATAAGGATGGAGATGTGACTGTAACTAATGATGGGGCCACCATCTTAAGCATGATGGATGTTGATCATCAGATTGCCAAGCTG ATGGTGGAACTGTCCAAGTCTCAGGATGATGAAATTGGAGATGGAACCACAGGAGTGGTTGTCCTGGCTGGTGCCTTGTTAGAAGAAGCG GAGCAATTGCTAGACCGAGGCATTCACCCAATCAGAATAGCCGATGGCTATGAGCAGGCTGCTCGTGTTGCTATTGAACACCTGGACAAG ATCAGCGATAGCGTCCTTGTTGACATAAAGGACACCGAACCCCTGATTCAGACAGCAAAAACCACGCTGGGCTCCAAAGTGGTCAACAGT TGTCACCGACAGATGGCTGAGATTGCTGTGAATGCCGTCCTCACTGTAGCAGATATGGAGCGGAGAGACGTTGACTTTGAGCTTATCAAA GTAGAAGGCAAAGTGGGCGGCAGGCTGGAGGACACTAAACTGATTAAGGGCGTGATTGTGGACAAGGATTTCAGTCACCCACAGATGCCA AAAAAAGTGGAAGATGCGAAGATTGCAATTCTCACATGTCCATTTGAACCACCCAAACCAAAAACAAAGCATAAGCTGGATGTGACCTCT GTCGAAGATTATAAAGCCCTTCAGAAATACGAAAAGGAGAAATTTGAAGAGATGATTCAACAAATTAAAGAGACTGGTGCTAACCTAGCA ATTTGTCAGTGGGGCTTTGATGATGAAGCAAATCACTTACTTCTTCAGAACAACTTGCCTGCGGTTCGCTGGGTAGGAGGACCTGAAATT GAGCTGATTGCCATCGCAACAGGAGGGCGGATCGTCCCCAGGTTCTCAGAGCTCACAGCCGAGAAGCTGGGCTTTGCTGGTCTTGTACAG GAGATCTCATTTGGGACAACTAAGGATAAAATGCTGGTCATCGAGCAGTGTAAGAACTCCAGAGCTGTAACCATTTTTATTAGAGGAGGA AATAAGATGATCATTGAGGAGGCGAAACGATCCCTTCACGATGCTTTGTGTGTCATCCGGAACCTCATCCGCGATAATCGTGTGGTGTAT GGAGGAGGGGCTGCTGAGATATCCTGTGCCCTGGCAGTTAGCCAAGAGGCGGATAAGTGCCCCACCTTAGAACAGTATGCCATGAGAGCG TTTGCCGACGCACTGGAGGTCATCCCCATGGCCCTCTCTGAAAACAGTGGCATGAATCCCATCCAGACTATGACCGAAGTCCGAGCCAGA CAGGTGAAGGAGATGAACCCTGCTCTTGGCATCGACTGTTTGCACAAGGGGACAAATGATATGAAGCAACAGCATGTCATAGAAACCTTG ATTGGCAAAAAGCAACAGATATCTCTTGCAACACAAATGGTTAGAATGATTTTGAAGATTGATGACATTCGTAAGCCTGGAGAATCTGAA >In-frame_PCBP2_ENST00000359462_chr12_53873616_+_CCT5_ENST00000280326_chr5_10250033_+_3537nt ATGGACACCGGTGTGATTGAAGGTGGATTAAATGTCACTCTCACCATCCGGCTACTTATGCATGGAAAGGAAGTTGGCAGTATCATCGGA AAGAAAGGAGAATCAGTTAAGAAGATGCGCGAGGAGAGTGGTGCACGTATCAACATCTCAGAAGGGAATTGTCCTGAGAGAATTATCACT TTGGCTGGACCCACTAATGCCATCTTCAAAGCCTTTGCTATGATCATTGACAAACTGGAAGAGGACATAAGCAGCTCTATGACCAATAGC ACAGCTGCCAGTAGACCCCCGGTCACCCTGAGGCTGGTGGTCCCTGCTAGTCAGTGTGGCTCTCTCATTGGAAAAGGTGGATGCAAGATC AAGGAAATACGAGAGAGTACAGGGGCTCAGGTCCAGGTGGCAGGGGATATGCTACCCAACTCAACTGAGCGGGCCATCACTATTGCTGGC ATTCCACAATCCATCATTGAGTGTGTCAAACAGATCTGCGTGGTCATGTTGGAGACTCTCTCCCAGTCCCCCCCGAAGGGCGTGACCATC CCGTACCGGCCCAAGCCGTCCAGCTCTCCGGTCATCTTTGCAGGTGGTCAGGACAGGTACAGCACAGGCAGCGACAGTGCGAGCTTTCCC CACACCACCCCGTCCATGTGCCTCAACCCTGACCTGGAGGGACCACCTCTAGAGGCCTATACCATTCAAGGACAGTATGCCATTCCACAG CCAGATTTGACCAAGCTGCACCAGTTGGCAATGCAACAGTCTCATTTTCCCATGACGCATGGCAACACCGGATTCAGTGGCATTGAATCC AGCTCTCCAGAGGTGAAAGGCTATTGGGCAGGTTTGGATGCATCTGCTCAGACTACTTCTCATGAACTCACCATTCCAAACGATTTGATT GGCTGCATAATCGGGCGTCAAGGCGCCAAAATCAATGAGATCCGTCAGATGTCTGGGGCGCAGATCAAAATTGCGAACCCAGTGGAAGGA TCTACTGATAGGCAGGTTACCATCACTGGATCTGCTGCCAGCATTAGCCTGGCTCAATATCTAATCAATGTCAGGCTTTCCTCGGAGACG GGTGGCATGGGGAGCAGCTAGAACAATGCAGATTCATCCATAATCCCTTTCTGCTGTTCACCACCACCCATGATCCATCTGTGTAGTTTC TGAACAGTCAGCGATTCCAGGTTTTAAATAGTTTGTAAATTTTCAGTTTCTACACACTTTATCATCCACTCGTGATTTTTTAATTAAAGC GTTTTAATTCCTTTCTCTGTTCAGCTGTTGATGCTGAGATCCATATTTAGTTTTATAAGCTTCTCCCTGGTTTTTTTTTTTTGGCTCATG AATTTTTCTGTTTGTCATGGAAATGTAAGAGTGGAATATTAATACATTTCAGTTTAGTTCTGTAATGTCAGGAATTTTTCAAAAAAATTA AAAGATGGACTGGAGCTTTTTCTTTGTGAATAGAAACTGGATGCCACAGTGAAAAAAAAAAAAAACCGGAAATGGGTCCTACCATCTTCT CGGAGCCGGAGTGCGAAGAAATAAAGAAATAGTGCTTTAAGTCAATGAATTCCTCCTTGGGACCCACTATCGAGAAACTATCAGTGGTAA CGTTTTAAAAAATGACAAATTCAATCTGCTCTTGACTTGTGTGTCCTAAGATTTCCACTAAGTGTCTTCAAACCTCCCCCTCCCCGGCTT CCTGGATAATAGAAGTTCCCGAAGGCCGCCGATTCCAGAAGATACTGTCTGGCGTGAAATTAGTCTCAGTAGAAACATAAGTCCCGCGCG TCTTGTGCTGCGCGTGCGCAAGCTTTTGGGCCCTCCCGAGAAAGGGAAGTGCATTCTCGCTTCCGTAGCGGTCTCCGCCGGTTGGGGGGA AGTAATTCCGGTTGTTGCACCATGGCGTCCATGGGGACCCTCGCCTTCGATGAATATGGGCGCCCTTTCCTCATCATCAAGGATCAGGAC CGCAAGTCCCGTCTTATGGGACTTGAGGCCCTCAAGTCTCATATAATGGCAGCAAAGGCTGTAGCAAATACAATGAGAACATCACTTGGA CCAAATGGGCTTGATAAGATGATGGTGGATAAGGATGGAGATGTGACTGTAACTAATGATGGGGCCACCATCTTAAGCATGATGGATGTT GATCATCAGATTGCCAAGCTGATGGTGGAACTGTCCAAGTCTCAGGATGATGAAATTGGAGATGGAACCACAGGAGTGGTTGTCCTGGCT GGTGCCTTGTTAGAAGAAGCGGAGCAATTGCTAGACCGAGGCATTCACCCAATCAGAATAGCCGATGGCTATGAGCAGGCTGCTCGTGTT GCTATTGAACACCTGGACAAGATCAGCGATAGCGTCCTTGTTGACATAAAGGACACCGAACCCCTGATTCAGACAGCAAAAACCACGCTG GGCTCCAAAGTGGTCAACAGTTGTCACCGACAGATGGCTGAGATTGCTGTGAATGCCGTCCTCACTGTAGCAGATATGGAGCGGAGAGAC GTTGACTTTGAGCTTATCAAAGTAGAAGGCAAAGTGGGCGGCAGGCTGGAGGACACTAAACTGATTAAGGGCGTGATTGTGGACAAGGAT TTCAGTCACCCACAGATGCCAAAAAAAGTGGAAGATGCGAAGATTGCAATTCTCACATGTCCATTTGAACCACCCAAACCAAAAACAAAG CATAAGCTGGATGTGACCTCTGTCGAAGATTATAAAGCCCTTCAGAAATACGAAAAGGAGAAATTTGAAGAGATGATTCAACAAATTAAA GAGACTGGTGCTAACCTAGCAATTTGTCAGTGGGGCTTTGATGATGAAGCAAATCACTTACTTCTTCAGAACAACTTGCCTGCGGTTCGC TGGGTAGGAGGACCTGAAATTGAGCTGATTGCCATCGCAACAGGAGGGCGGATCGTCCCCAGGTTCTCAGAGCTCACAGCCGAGAAGCTG GGCTTTGCTGGTCTTGTACAGGAGATCTCATTTGGGACAACTAAGGATAAAATGCTGGTCATCGAGCAGTGTAAGAACTCCAGAGCTGTA ACCATTTTTATTAGAGGAGGAAATAAGATGATCATTGAGGAGGCGAAACGATCCCTTCACGATGCTTTGTGTGTCATCCGGAACCTCATC CGCGATAATCGTGTGGTGTATGGAGGAGGGGCTGCTGAGATATCCTGTGCCCTGGCAGTTAGCCAAGAGGCGGATAAGTGCCCCACCTTA GAACAGTATGCCATGAGAGCGTTTGCCGACGCACTGGAGGTCATCCCCATGGCCCTCTCTGAAAACAGTGGCATGAATCCCATCCAGACT ATGACCGAAGTCCGAGCCAGACAGGTGAAGGAGATGAACCCTGCTCTTGGCATCGACTGTTTGCACAAGGGGACAAATGATATGAAGCAA CAGCATGTCATAGAAACCTTGATTGGCAAAAAGCAACAGATATCTCTTGCAACACAAATGGTTAGAATGATTTTGAAGATTGATGACATT |
| * Fusion transcript sequences (Full-length transcript). |
| >In-frame_PCBP2_ENST00000359282_chr12_53873616_+_CCT5_ENST00000280326_chr5_10250033_+_5405nt CCCAGACCAGCAGAGGCAGCAGCCGGAGCAGCCGCAGCCTGCGCCCTCTCCCGCCCGCCCGCCCTCCGCCCGCCCGCCCGCCCTCCGCCG CCCTCCACCCGCCCCGGGGTCTCTTTCCCCCTTCCTCCTCCTCCTCCTCCACCCCCCCTTCCTCCTCCGCCCGCCCGCGGGGCCCCCCTC GCCTTCCCGCCCGCCCCTATTGTTCCGCCCCCGGCCTCCCGCCCTTCCCCTTCCCGCCCGCTCCCCTTTTCCCCTCAGTCGCCTCGCGCC TGCAGTTTTTGGCTTTCACCCCCAACCAGTGACCAAAGACTTGACCACTCAAAGTCCAGCTCCCCAGAACACTGCTCGACATGGACACCG GTGTGATTGAAGGTGGATTAAATGTCACTCTCACCATCCGGCTACTTATGCATGGAAAGGAAGTTGGCAGTATCATCGGAAAGAAAGGAG AATCAGTTAAGAAGATGCGCGAGGAGAGTGGTGCACGTATCAACATCTCAGAAGGGAATTGTCCTGAGAGAATTATCACTTTGGCTGGAC CCACTAATGCCATCTTCAAAGCCTTTGCTATGATCATTGACAAACTGGAAGAGGACATAAGCAGCTCTATGACCAATAGCACAGCTGCCA GTAGACCCCCGGTCACCCTGAGGCTGGTGGTCCCTGCTAGTCAGTGTGGCTCTCTCATTGGAAAAGGTGGATGCAAGATCAAGGAAATAC GAGAGAGTACAGGGGCTCAGGTCCAGGTGGCAGGGGATATGCTACCCAACTCAACTGAGCGGGCCATCACTATTGCTGGCATTCCACAAT CCATCATTGAGTGTGTCAAACAGATCTGCGTGGTCATGTTGGAGTCCCCCCCGAAGGGCGTGACCATCCCGTACCGGCCCAAGCCGTCCA GCTCTCCGGTCATCTTTGCAGGTGGTCAGGCCTATACCATTCAAGGACAGTATGCCATTCCACAGCCAGATTTGACCAAGCTGCACCAGT TGGCAATGCAACAGTCTCATTTTCCCATGACGCATGGCAACACCGGATTCAGTGGCATTGAATCCAGCTCTCCAGAGGTGAAAGGCTATT GGGCAGGTTTGGATGCATCTGCTCAGACTACTTCTCATGAACTCACCATTCCAAACGATTTGATTGGCTGCATAATCGGGCGTCAAGGCG CCAAAATCAATGAGATCCGTCAGATGTCTGGGGCGCAGATCAAAATTGCGAACCCAGTGGAAGGATCTACTGATAGGCAGGTTACCATCA CTGGATCTGCTGCCAGCATTAGCCTGGCTCAATATCTAATCAATGTCAGGCTTTCCTCGGAGACGGGTGGCATGGGGAGCAGCTAGAACA ATGCAGATTCATCCATAATCCCTTTCTGCTGTTCACCACCACCCATGATCCATCTGTGTAGTTTCTGAACAGTCAGCGATTCCAGGTTTT AAATAGTTTGTAAATTTTCAGTTTCTACACACTTTATCATCCACTCGTGATTTTTTAATTAAAGCGTTTTAATTCCTTTCTCTGTTCAGC TGTTGATGCTGAGATCCATATTTAGTTTTATAAGCTTCTCCCTGGTTTTTTTTTTTTGGCTCATGAATTTTTCTGTTTGTCATGGAAATG TAAGAGTGGAATATTAATACATTTCAGTTTAGTTCTGTAATGTCAGGAATTTTTCAAAAAAATTAAAAGATGGACTGGAGCTTTTTCTTT GTGAATAGAAACTGGATGCCAAAAAAAAAAAAAACCGGAAATGGGTCCTACCATCTTCTCGGAGCCGGAGTGCGAAGAAATAAAGAAATA GTGCTTTAAGTCAATGAATTCCTCCTTGGGACCCACTATCGAGAAACTATCAGTGGTAACGTTTTAAAAAATGACAAATTCAATCTGCTC TTGACTTGTGTGTCCTAAGATTTCCACTAAGTGTCTTCAAACCTCCCCCTCCCCGGCTTCCTGGATAATAGAAGTTCCCGAAGGCCGCCG ATTCCAGAAGATACTGTCTGGCGTGAAATTAGTCTCAGTAGAAACATAAGTCCCGCGCGTCTTGTGCTGCGCGTGCGCAAGCTTTTGGGC CCTCCCGAGAAAGGGAAGTGCATTCTCGCTTCCGTAGCGGTCTCCGCCGGTTGGGGGGAAGTAATTCCGGTTGTTGCACCATGGCGTCCA TGGGGACCCTCGCCTTCGATGAATATGGGCGCCCTTTCCTCATCATCAAGGATCAGGACCGCAAGTCCCGTCTTATGGGACTTGAGGCCC TCAAGTCTCATATAATGGCAGCAAAGGCTGTAGCAAATACAATGAGAACATCACTTGGACCAAATGGGCTTGATAAGATGATGGTGGATA AGGATGGAGATGTGACTGTAACTAATGATGGGGCCACCATCTTAAGCATGATGGATGTTGATCATCAGATTGCCAAGCTGATGGTGGAAC TGTCCAAGTCTCAGGATGATGAAATTGGAGATGGAACCACAGGAGTGGTTGTCCTGGCTGGTGCCTTGTTAGAAGAAGCGGAGCAATTGC TAGACCGAGGCATTCACCCAATCAGAATAGCCGATGGCTATGAGCAGGCTGCTCGTGTTGCTATTGAACACCTGGACAAGATCAGCGATA GCGTCCTTGTTGACATAAAGGACACCGAACCCCTGATTCAGACAGCAAAAACCACGCTGGGCTCCAAAGTGGTCAACAGTTGTCACCGAC AGATGGCTGAGATTGCTGTGAATGCCGTCCTCACTGTAGCAGATATGGAGCGGAGAGACGTTGACTTTGAGCTTATCAAAGTAGAAGGCA AAGTGGGCGGCAGGCTGGAGGACACTAAACTGATTAAGGGCGTGATTGTGGACAAGGATTTCAGTCACCCACAGATGCCAAAAAAAGTGG AAGATGCGAAGATTGCAATTCTCACATGTCCATTTGAACCACCCAAACCAAAAACAAAGCATAAGCTGGATGTGACCTCTGTCGAAGATT ATAAAGCCCTTCAGAAATACGAAAAGGAGAAATTTGAAGAGATGATTCAACAAATTAAAGAGACTGGTGCTAACCTAGCAATTTGTCAGT GGGGCTTTGATGATGAAGCAAATCACTTACTTCTTCAGAACAACTTGCCTGCGGTTCGCTGGGTAGGAGGACCTGAAATTGAGCTGATTG CCATCGCAACAGGAGGGCGGATCGTCCCCAGGTTCTCAGAGCTCACAGCCGAGAAGCTGGGCTTTGCTGGTCTTGTACAGGAGATCTCAT TTGGGACAACTAAGGATAAAATGCTGGTCATCGAGCAGTGTAAGAACTCCAGAGCTGTAACCATTTTTATTAGAGGAGGAAATAAGATGA TCATTGAGGAGGCGAAACGATCCCTTCACGATGCTTTGTGTGTCATCCGGAACCTCATCCGCGATAATCGTGTGGTGTATGGAGGAGGGG CTGCTGAGATATCCTGTGCCCTGGCAGTTAGCCAAGAGGCGGATAAGTGCCCCACCTTAGAACAGTATGCCATGAGAGCGTTTGCCGACG CACTGGAGGTCATCCCCATGGCCCTCTCTGAAAACAGTGGCATGAATCCCATCCAGACTATGACCGAAGTCCGAGCCAGACAGGTGAAGG AGATGAACCCTGCTCTTGGCATCGACTGTTTGCACAAGGGGACAAATGATATGAAGCAACAGCATGTCATAGAAACCTTGATTGGCAAAA AGCAACAGATATCTCTTGCAACACAAATGGTTAGAATGATTTTGAAGATTGATGACATTCGTAAGCCTGGAGAATCTGAAGAATGAAGAC ATTGAGAAAACTATGTAGCAAGATCCACTTCTGTGATTAAGTAAATGGATGTCTCGTGATGCATCTACAGTTATTTATTGTTACATCCTT TTCCAGACACTGTAGATGCTATAATAAAAATAGCTGTTTGGTAACCATAGTTTCACTTGTTCAAAGCTGTGTAATCGTGGGGGTACCATC TCAACTGCTTTTGTATTCATTGTATTAAAAGAATCTGTTTAAACAACCTTTATCTTCTCTTCGGGTTTAAGAAACGTTTATTGTAACAGT AATTAAATGCTGCCTTAATTGAAGGGGTTTGGGTGGATTTTTTTTTCTCAAAATAAGCTGTAGGGACTATTTTAACAGCTTAAACAGGAG CTCTCAAGATGCACTTTCATATTGAGAGGAATATGGGCTTGATCCTCTTCCTATCTAAATGGGTGGGCCATTTGATTGTAGAGGGTCCAC CACAGAATTATGGGATGCCTTAAGTGCTGTTACTAGGTTGCTCACAGCCTAACCTGGCGTGTTGTTTAGGGCTGATGGAGACCCATGTGA GCCTTTGCTTTCCTCTGGCCCCGGCCCCACCCTGAACACAGCTCATACACAGAATCAGGACCAGCATGTGCAGAGCTGGCCACCAGCACA GGCTTAGGGCAGTTCAGAACCCACTTGTTTCCCTATCAGAGGGACACAGTGAAGTGGAGGTTAAAGTAAATTACAGGAAATAAGGGAGAA ATCTTGCAGTTACCATGTTCAGATAGAGTGACTGAAATTAATTGTACTTACTAAAGTATTAACTAGCTAACAGTGATGGGCCAAGACGCT CCGAGAACTCTACCGGGATTGTCTGTTCTGACAACCCAGTGAGGCAGATACACTTTCTTACTGCTCACATCTTACAGGTGAGTACTCATA ATTGGCCAGCATCTCACCACCAGCAAGTAGTAGGGCCAGGTCAATCCCAGGCAGTCTGACCCCAGAGTGGCCCAGCTCATCCCCTACTCT GTTATTTGCTTGTTAATGATTCTCTAGATTTTCTAAAATAATGTTTCTTAGCATTGTGATGATAAAGCTCATGATGAACTTTATCACTAG TTATGCCACCTTAACTAGTCAGATTTCCTAGAATTAGGAAATGGTGACTCTTGTCTAAATTTGGTTAAGTGATGAATTTGGGTTACCGTC TCATGTGAACCTGGAGATTCACCAGTCTTAACTTTTGGGTCATTGTGTTTTCTCTACATTCATGCATTGGATGTTTTGCTAAATAACTCC TGTGGATTTAGGAATGTGTGCTAATAGCAATCTTCCTAATTTTCATGTTTATATGGAACTATGCAGTTGAGTATTGAAAGCTTTAAACTG AGTTTATTTACAAGGACTGAGTCTAGCCTACAGAGAACATACAGCAGCCTTCTTTGGACCACAGTCTTATCCGAGGGGTCTGTGGTTGTA TCAGAAGAGCCACTAAACCAATCCCCCTTTCCAAAATTGAACCTCACAGACGTTCCTGTTTTTTGTGATTGAGAAACTGGTCAATGAACA GGAAGACTTAGAGATGTTTCACAAGCCTTTGATTTTTGTTTCATTTATTTGTAATAAACCTCTTCCACGTGATGTCTTTTATTTTTCACG >In-frame_PCBP2_ENST00000359462_chr12_53873616_+_CCT5_ENST00000280326_chr5_10250033_+_5489nt GCAGCCGCAGCCTGCGCCCTCTCCCGCCCGCCCGCCCTCCGCCCGCCCGCCCGCCCTCCGCCGCCCTCCACCCGCCCCGGGGTCTCTTTC CCCCTTCCTCCTCCTCCTCCTCCACCCCCCCTTCCTCCTCCGCCCGCCCGCGGGGCCCCCCTCGCCTTCCCGCCCGCCCCTATTGTTCCG CCCCCGGCCTCCCGCCCTTCCCCTTCCCGCCCGCTCCCCTTTTCCCCTCAGTCGCCTCGCGCCTGCAGTTTTTGGCTTTCACCCCCAACC AGTGACCAAAGACTTGACCACTCAAAGTCCAGCTCCCCAGAACACTGCTCGACATGGACACCGGTGTGATTGAAGGTGGATTAAATGTCA CTCTCACCATCCGGCTACTTATGCATGGAAAGGAAGTTGGCAGTATCATCGGAAAGAAAGGAGAATCAGTTAAGAAGATGCGCGAGGAGA GTGGTGCACGTATCAACATCTCAGAAGGGAATTGTCCTGAGAGAATTATCACTTTGGCTGGACCCACTAATGCCATCTTCAAAGCCTTTG CTATGATCATTGACAAACTGGAAGAGGACATAAGCAGCTCTATGACCAATAGCACAGCTGCCAGTAGACCCCCGGTCACCCTGAGGCTGG TGGTCCCTGCTAGTCAGTGTGGCTCTCTCATTGGAAAAGGTGGATGCAAGATCAAGGAAATACGAGAGAGTACAGGGGCTCAGGTCCAGG TGGCAGGGGATATGCTACCCAACTCAACTGAGCGGGCCATCACTATTGCTGGCATTCCACAATCCATCATTGAGTGTGTCAAACAGATCT GCGTGGTCATGTTGGAGACTCTCTCCCAGTCCCCCCCGAAGGGCGTGACCATCCCGTACCGGCCCAAGCCGTCCAGCTCTCCGGTCATCT TTGCAGGTGGTCAGGACAGGTACAGCACAGGCAGCGACAGTGCGAGCTTTCCCCACACCACCCCGTCCATGTGCCTCAACCCTGACCTGG AGGGACCACCTCTAGAGGCCTATACCATTCAAGGACAGTATGCCATTCCACAGCCAGATTTGACCAAGCTGCACCAGTTGGCAATGCAAC AGTCTCATTTTCCCATGACGCATGGCAACACCGGATTCAGTGGCATTGAATCCAGCTCTCCAGAGGTGAAAGGCTATTGGGCAGGTTTGG ATGCATCTGCTCAGACTACTTCTCATGAACTCACCATTCCAAACGATTTGATTGGCTGCATAATCGGGCGTCAAGGCGCCAAAATCAATG AGATCCGTCAGATGTCTGGGGCGCAGATCAAAATTGCGAACCCAGTGGAAGGATCTACTGATAGGCAGGTTACCATCACTGGATCTGCTG CCAGCATTAGCCTGGCTCAATATCTAATCAATGTCAGGCTTTCCTCGGAGACGGGTGGCATGGGGAGCAGCTAGAACAATGCAGATTCAT CCATAATCCCTTTCTGCTGTTCACCACCACCCATGATCCATCTGTGTAGTTTCTGAACAGTCAGCGATTCCAGGTTTTAAATAGTTTGTA AATTTTCAGTTTCTACACACTTTATCATCCACTCGTGATTTTTTAATTAAAGCGTTTTAATTCCTTTCTCTGTTCAGCTGTTGATGCTGA GATCCATATTTAGTTTTATAAGCTTCTCCCTGGTTTTTTTTTTTTGGCTCATGAATTTTTCTGTTTGTCATGGAAATGTAAGAGTGGAAT ATTAATACATTTCAGTTTAGTTCTGTAATGTCAGGAATTTTTCAAAAAAATTAAAAGATGGACTGGAGCTTTTTCTTTGTGAATAGAAAC TGGATGCCACAGTGAAAAAAAAAAAAAACCGGAAATGGGTCCTACCATCTTCTCGGAGCCGGAGTGCGAAGAAATAAAGAAATAGTGCTT TAAGTCAATGAATTCCTCCTTGGGACCCACTATCGAGAAACTATCAGTGGTAACGTTTTAAAAAATGACAAATTCAATCTGCTCTTGACT TGTGTGTCCTAAGATTTCCACTAAGTGTCTTCAAACCTCCCCCTCCCCGGCTTCCTGGATAATAGAAGTTCCCGAAGGCCGCCGATTCCA GAAGATACTGTCTGGCGTGAAATTAGTCTCAGTAGAAACATAAGTCCCGCGCGTCTTGTGCTGCGCGTGCGCAAGCTTTTGGGCCCTCCC GAGAAAGGGAAGTGCATTCTCGCTTCCGTAGCGGTCTCCGCCGGTTGGGGGGAAGTAATTCCGGTTGTTGCACCATGGCGTCCATGGGGA CCCTCGCCTTCGATGAATATGGGCGCCCTTTCCTCATCATCAAGGATCAGGACCGCAAGTCCCGTCTTATGGGACTTGAGGCCCTCAAGT CTCATATAATGGCAGCAAAGGCTGTAGCAAATACAATGAGAACATCACTTGGACCAAATGGGCTTGATAAGATGATGGTGGATAAGGATG GAGATGTGACTGTAACTAATGATGGGGCCACCATCTTAAGCATGATGGATGTTGATCATCAGATTGCCAAGCTGATGGTGGAACTGTCCA AGTCTCAGGATGATGAAATTGGAGATGGAACCACAGGAGTGGTTGTCCTGGCTGGTGCCTTGTTAGAAGAAGCGGAGCAATTGCTAGACC GAGGCATTCACCCAATCAGAATAGCCGATGGCTATGAGCAGGCTGCTCGTGTTGCTATTGAACACCTGGACAAGATCAGCGATAGCGTCC TTGTTGACATAAAGGACACCGAACCCCTGATTCAGACAGCAAAAACCACGCTGGGCTCCAAAGTGGTCAACAGTTGTCACCGACAGATGG CTGAGATTGCTGTGAATGCCGTCCTCACTGTAGCAGATATGGAGCGGAGAGACGTTGACTTTGAGCTTATCAAAGTAGAAGGCAAAGTGG GCGGCAGGCTGGAGGACACTAAACTGATTAAGGGCGTGATTGTGGACAAGGATTTCAGTCACCCACAGATGCCAAAAAAAGTGGAAGATG CGAAGATTGCAATTCTCACATGTCCATTTGAACCACCCAAACCAAAAACAAAGCATAAGCTGGATGTGACCTCTGTCGAAGATTATAAAG CCCTTCAGAAATACGAAAAGGAGAAATTTGAAGAGATGATTCAACAAATTAAAGAGACTGGTGCTAACCTAGCAATTTGTCAGTGGGGCT TTGATGATGAAGCAAATCACTTACTTCTTCAGAACAACTTGCCTGCGGTTCGCTGGGTAGGAGGACCTGAAATTGAGCTGATTGCCATCG CAACAGGAGGGCGGATCGTCCCCAGGTTCTCAGAGCTCACAGCCGAGAAGCTGGGCTTTGCTGGTCTTGTACAGGAGATCTCATTTGGGA CAACTAAGGATAAAATGCTGGTCATCGAGCAGTGTAAGAACTCCAGAGCTGTAACCATTTTTATTAGAGGAGGAAATAAGATGATCATTG AGGAGGCGAAACGATCCCTTCACGATGCTTTGTGTGTCATCCGGAACCTCATCCGCGATAATCGTGTGGTGTATGGAGGAGGGGCTGCTG AGATATCCTGTGCCCTGGCAGTTAGCCAAGAGGCGGATAAGTGCCCCACCTTAGAACAGTATGCCATGAGAGCGTTTGCCGACGCACTGG AGGTCATCCCCATGGCCCTCTCTGAAAACAGTGGCATGAATCCCATCCAGACTATGACCGAAGTCCGAGCCAGACAGGTGAAGGAGATGA ACCCTGCTCTTGGCATCGACTGTTTGCACAAGGGGACAAATGATATGAAGCAACAGCATGTCATAGAAACCTTGATTGGCAAAAAGCAAC AGATATCTCTTGCAACACAAATGGTTAGAATGATTTTGAAGATTGATGACATTCGTAAGCCTGGAGAATCTGAAGAATGAAGACATTGAG AAAACTATGTAGCAAGATCCACTTCTGTGATTAAGTAAATGGATGTCTCGTGATGCATCTACAGTTATTTATTGTTACATCCTTTTCCAG ACACTGTAGATGCTATAATAAAAATAGCTGTTTGGTAACCATAGTTTCACTTGTTCAAAGCTGTGTAATCGTGGGGGTACCATCTCAACT GCTTTTGTATTCATTGTATTAAAAGAATCTGTTTAAACAACCTTTATCTTCTCTTCGGGTTTAAGAAACGTTTATTGTAACAGTAATTAA ATGCTGCCTTAATTGAAGGGGTTTGGGTGGATTTTTTTTTCTCAAAATAAGCTGTAGGGACTATTTTAACAGCTTAAACAGGAGCTCTCA AGATGCACTTTCATATTGAGAGGAATATGGGCTTGATCCTCTTCCTATCTAAATGGGTGGGCCATTTGATTGTAGAGGGTCCACCACAGA ATTATGGGATGCCTTAAGTGCTGTTACTAGGTTGCTCACAGCCTAACCTGGCGTGTTGTTTAGGGCTGATGGAGACCCATGTGAGCCTTT GCTTTCCTCTGGCCCCGGCCCCACCCTGAACACAGCTCATACACAGAATCAGGACCAGCATGTGCAGAGCTGGCCACCAGCACAGGCTTA GGGCAGTTCAGAACCCACTTGTTTCCCTATCAGAGGGACACAGTGAAGTGGAGGTTAAAGTAAATTACAGGAAATAAGGGAGAAATCTTG CAGTTACCATGTTCAGATAGAGTGACTGAAATTAATTGTACTTACTAAAGTATTAACTAGCTAACAGTGATGGGCCAAGACGCTCCGAGA ACTCTACCGGGATTGTCTGTTCTGACAACCCAGTGAGGCAGATACACTTTCTTACTGCTCACATCTTACAGGTGAGTACTCATAATTGGC CAGCATCTCACCACCAGCAAGTAGTAGGGCCAGGTCAATCCCAGGCAGTCTGACCCCAGAGTGGCCCAGCTCATCCCCTACTCTGTTATT TGCTTGTTAATGATTCTCTAGATTTTCTAAAATAATGTTTCTTAGCATTGTGATGATAAAGCTCATGATGAACTTTATCACTAGTTATGC CACCTTAACTAGTCAGATTTCCTAGAATTAGGAAATGGTGACTCTTGTCTAAATTTGGTTAAGTGATGAATTTGGGTTACCGTCTCATGT GAACCTGGAGATTCACCAGTCTTAACTTTTGGGTCATTGTGTTTTCTCTACATTCATGCATTGGATGTTTTGCTAAATAACTCCTGTGGA TTTAGGAATGTGTGCTAATAGCAATCTTCCTAATTTTCATGTTTATATGGAACTATGCAGTTGAGTATTGAAAGCTTTAAACTGAGTTTA TTTACAAGGACTGAGTCTAGCCTACAGAGAACATACAGCAGCCTTCTTTGGACCACAGTCTTATCCGAGGGGTCTGTGGTTGTATCAGAA GAGCCACTAAACCAATCCCCCTTTCCAAAATTGAACCTCACAGACGTTCCTGTTTTTTGTGATTGAGAAACTGGTCAATGAACAGGAAGA |
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FusionGenePPI for PCBP2_CCT5 |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
| Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
| Hgene | Hgene's interactors | Tgene | Tgene's interactors |
| PCBP2 | PCBP2, PTBP1, HNRNPK, HNRNPL, MEPCE, CDK9, RUVBL1, RUVBL2, POLR3H, KAT2A, H2AFX, UBC, HDAC5, PSMA3, HNRNPD, PABPC1, ELAVL1, MAVS, ITCH, IFIH1, CUL3, CUL2, CDK2, CUL1, COPS5, QKI, PCBP1, FBXO6, EEF1A1, PPIB, BARD1, PAXIP1, FN1, VCAM1, SF3B2, SLU7, WDR83, WDR77, NKAP, NOS2, PRPF40A, BRCA1, UBL4A, ITGA4, CD81, IGSF8, HMGA1, HMGA2, ADRB2, CASK, TARDBP, CEP250, HUWE1, FUS, SNRPA, PHF6, CUL7, OBSL1, CCDC8, EED, FTH1, HNRNPA1, ACAT2, ANXA2, ARF4, ARF5, CCDC58, DAZAP1, FUBP1, FUBP3, GBA, GNB2L1, GNPNAT1, KIF2C, LGALS1, LGALS3, MAGI3, PIN1, SCYL2, STIP1, TIA1, TIAL1, TRIP6, UBE2M, NTRK1, MCM2, CDC5L, CDH1, CYLD, URI1 | CCT5 | XRN1, THEG, SSSCA1, HDAC3, ACTB, TBC1D17, IKBKAP, IMMT, TP53, PPP4C, CTTNBP2, MOB4, PPP2CA, STK24, STRN, STRN3, TRAF3IP3, PPP2CB, PPP2R2C, IGBP1, TCP1, ACTA2, ACTA1, GPN1, HNRNPH1, RPAP2, RPAP3, CDK9, RFWD2, SRRM2, SRRM1, WDR82, H2AFX, UBC, MYC, PPP2R2A, PPP2R2B, PPP2R2D, PPP2R4, AGO4, HDAC5, PCK1, VHL, SIRT7, FBXO25, CUL3, CUL4A, CDK2, GNB5, GNB1, RGS7, PDCL, GRB2, PACRG, CCT2, CCT3, CCT8, CCT6A, CCT4, CCT7, CCT6B, AHCYL1, IARS, TARS, PSMA6, PSMB1, VCP, SSR1, XPO1, SLU7, TXNL1, SRSF2, ATXN2, TRIM28, FN1, VCAM1, ATF2, PEX14, NOS2, FAM86B2, METTL21B, ITGA4, PAN2, HDAC6, FBXW4, TERT, FBXO6, CDK5, ILK, CDC20, LGALS3BP, NEDD1, TUBG1, HUWE1, FUS, CUL7, OBSL1, RNF2, SIRT6, IKBKE, IRAK1, SGK2, TSSK6, TYK2, WDR76, POC1A, PEX7, RPS6KB2, DCAF7, UNK, ACTR2, AHNAK, HSPE1, PIN4, STUB1, NTRK1, BTRC, B9D1, MKS1, CETN2, CDK1, DDB2, HDAC1, PDK3, NSMAF, NIPSNAP1, PRPF4, BUB3, WRAP53, RFWD3, KIF21A, SEH1L, KBTBD7, TUBA1C, ARMC6, GAN, CRY2, ALKBH3, MCM2, SNW1, CDC5L, TTC27, NLE1, CDC73, CRBN, PPM1J, KLHDC8A, DNAI2, HCFC2, WDR77, DCAF11, KDM4B, KLHL33, KLHDC2, TXNDC9, WDR86, TBL1Y, DCAF8, THOC3, WDTC1, GANAB, ODF1, DCAF5, SEC31B, TSSC1, WDR83, CYLD, WDR92, TRIM25, MCPH1, HEY1, BRCA1, YAP1 |
| - Retained PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| - Lost PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
| - Retained PPIs, but lost function due to frame-shift fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for PCBP2_CCT5 |
| Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
| Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for PCBP2_CCT5 |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
| Tgene | CCT5 | C0019693 | HIV Infections | 1 | CTD_human |
| Tgene | CCT5 | C1458155 | Mammary Neoplasms | 1 | CTD_human |
| Tgene | CCT5 | C1850395 | Neuropathy, Hereditary Sensory, with Spastic Paraplegia, Autosomal Recessive | 1 | CTD_human;ORPHANET;UNIPROT |
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