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Fusion gene ID: 26111 |
FusionGeneSummary for PBRM1_TKT |
Fusion gene summary |
Fusion gene information | Fusion gene name: PBRM1_TKT | Fusion gene ID: 26111 | Hgene | Tgene | Gene symbol | PBRM1 | TKT | Gene ID | 55193 | 7086 |
Gene name | polybromo 1 | transketolase | |
Synonyms | BAF180|PB1 | HEL-S-48|HEL107|SDDHD|TK|TKT1 | |
Cytomap | 3p21.1 | 3p21.1 | |
Type of gene | protein-coding | protein-coding | |
Description | protein polybromo-1BRG1-associated factor 180polybromo-1D | transketolaseepididymis luminal protein 107epididymis secretory protein Li 48 | |
Modification date | 20180523 | 20180519 | |
UniProtAcc | Q86U86 | P29401 | |
Ensembl transtripts involved in fusion gene | ENST00000356770, ENST00000394830, ENST00000296302, ENST00000337303, ENST00000410007, ENST00000409057, ENST00000409114, ENST00000409767, | ENST00000462138, ENST00000423525, ENST00000461139, ENST00000423516, ENST00000296289, | |
Fusion gene scores | * DoF score | 9 X 6 X 9=486 | 8 X 8 X 6=384 |
# samples | 10 | 12 | |
** MAII score | log2(10/486*10)=-2.28095631383106 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(12/384*10)=-1.67807190511264 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: PBRM1 [Title/Abstract] AND TKT [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation | Tumor suppressor gene involved fusion gene, retained protein feature but frameshift. DDR (DNA damage repair) gene involved fusion gene, in-frame but not retained their domain. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Tgene | TKT | GO:0046166 | glyceraldehyde-3-phosphate biosynthetic process | 9611778 |
Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | LD | BRCA | TCGA-A7-A26G-01A | PBRM1 | chr3 | 52692215 | - | TKT | chr3 | 53276258 | - |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
Frame-shift | ENST00000356770 | ENST00000462138 | PBRM1 | chr3 | 52692215 | - | TKT | chr3 | 53276258 | - |
In-frame | ENST00000356770 | ENST00000423525 | PBRM1 | chr3 | 52692215 | - | TKT | chr3 | 53276258 | - |
5CDS-intron | ENST00000356770 | ENST00000461139 | PBRM1 | chr3 | 52692215 | - | TKT | chr3 | 53276258 | - |
5CDS-intron | ENST00000356770 | ENST00000423516 | PBRM1 | chr3 | 52692215 | - | TKT | chr3 | 53276258 | - |
5CDS-5UTR | ENST00000356770 | ENST00000296289 | PBRM1 | chr3 | 52692215 | - | TKT | chr3 | 53276258 | - |
In-frame | ENST00000394830 | ENST00000462138 | PBRM1 | chr3 | 52692215 | - | TKT | chr3 | 53276258 | - |
Frame-shift | ENST00000394830 | ENST00000423525 | PBRM1 | chr3 | 52692215 | - | TKT | chr3 | 53276258 | - |
5CDS-intron | ENST00000394830 | ENST00000461139 | PBRM1 | chr3 | 52692215 | - | TKT | chr3 | 53276258 | - |
5CDS-intron | ENST00000394830 | ENST00000423516 | PBRM1 | chr3 | 52692215 | - | TKT | chr3 | 53276258 | - |
5CDS-5UTR | ENST00000394830 | ENST00000296289 | PBRM1 | chr3 | 52692215 | - | TKT | chr3 | 53276258 | - |
Frame-shift | ENST00000296302 | ENST00000462138 | PBRM1 | chr3 | 52692215 | - | TKT | chr3 | 53276258 | - |
In-frame | ENST00000296302 | ENST00000423525 | PBRM1 | chr3 | 52692215 | - | TKT | chr3 | 53276258 | - |
5CDS-intron | ENST00000296302 | ENST00000461139 | PBRM1 | chr3 | 52692215 | - | TKT | chr3 | 53276258 | - |
5CDS-intron | ENST00000296302 | ENST00000423516 | PBRM1 | chr3 | 52692215 | - | TKT | chr3 | 53276258 | - |
5CDS-5UTR | ENST00000296302 | ENST00000296289 | PBRM1 | chr3 | 52692215 | - | TKT | chr3 | 53276258 | - |
Frame-shift | ENST00000337303 | ENST00000462138 | PBRM1 | chr3 | 52692215 | - | TKT | chr3 | 53276258 | - |
In-frame | ENST00000337303 | ENST00000423525 | PBRM1 | chr3 | 52692215 | - | TKT | chr3 | 53276258 | - |
5CDS-intron | ENST00000337303 | ENST00000461139 | PBRM1 | chr3 | 52692215 | - | TKT | chr3 | 53276258 | - |
5CDS-intron | ENST00000337303 | ENST00000423516 | PBRM1 | chr3 | 52692215 | - | TKT | chr3 | 53276258 | - |
5CDS-5UTR | ENST00000337303 | ENST00000296289 | PBRM1 | chr3 | 52692215 | - | TKT | chr3 | 53276258 | - |
Frame-shift | ENST00000410007 | ENST00000462138 | PBRM1 | chr3 | 52692215 | - | TKT | chr3 | 53276258 | - |
In-frame | ENST00000410007 | ENST00000423525 | PBRM1 | chr3 | 52692215 | - | TKT | chr3 | 53276258 | - |
5CDS-intron | ENST00000410007 | ENST00000461139 | PBRM1 | chr3 | 52692215 | - | TKT | chr3 | 53276258 | - |
5CDS-intron | ENST00000410007 | ENST00000423516 | PBRM1 | chr3 | 52692215 | - | TKT | chr3 | 53276258 | - |
5CDS-5UTR | ENST00000410007 | ENST00000296289 | PBRM1 | chr3 | 52692215 | - | TKT | chr3 | 53276258 | - |
Frame-shift | ENST00000409057 | ENST00000462138 | PBRM1 | chr3 | 52692215 | - | TKT | chr3 | 53276258 | - |
In-frame | ENST00000409057 | ENST00000423525 | PBRM1 | chr3 | 52692215 | - | TKT | chr3 | 53276258 | - |
5CDS-intron | ENST00000409057 | ENST00000461139 | PBRM1 | chr3 | 52692215 | - | TKT | chr3 | 53276258 | - |
5CDS-intron | ENST00000409057 | ENST00000423516 | PBRM1 | chr3 | 52692215 | - | TKT | chr3 | 53276258 | - |
5CDS-5UTR | ENST00000409057 | ENST00000296289 | PBRM1 | chr3 | 52692215 | - | TKT | chr3 | 53276258 | - |
Frame-shift | ENST00000409114 | ENST00000462138 | PBRM1 | chr3 | 52692215 | - | TKT | chr3 | 53276258 | - |
In-frame | ENST00000409114 | ENST00000423525 | PBRM1 | chr3 | 52692215 | - | TKT | chr3 | 53276258 | - |
5CDS-intron | ENST00000409114 | ENST00000461139 | PBRM1 | chr3 | 52692215 | - | TKT | chr3 | 53276258 | - |
5CDS-intron | ENST00000409114 | ENST00000423516 | PBRM1 | chr3 | 52692215 | - | TKT | chr3 | 53276258 | - |
5CDS-5UTR | ENST00000409114 | ENST00000296289 | PBRM1 | chr3 | 52692215 | - | TKT | chr3 | 53276258 | - |
Frame-shift | ENST00000409767 | ENST00000462138 | PBRM1 | chr3 | 52692215 | - | TKT | chr3 | 53276258 | - |
In-frame | ENST00000409767 | ENST00000423525 | PBRM1 | chr3 | 52692215 | - | TKT | chr3 | 53276258 | - |
5CDS-intron | ENST00000409767 | ENST00000461139 | PBRM1 | chr3 | 52692215 | - | TKT | chr3 | 53276258 | - |
5CDS-intron | ENST00000409767 | ENST00000423516 | PBRM1 | chr3 | 52692215 | - | TKT | chr3 | 53276258 | - |
5CDS-5UTR | ENST00000409767 | ENST00000296289 | PBRM1 | chr3 | 52692215 | - | TKT | chr3 | 53276258 | - |
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FusionProtFeatures for PBRM1_TKT |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
PBRM1 | TKT |
Catalyzes the transfer of a two-carbon ketol group froma ketose donor to an aldose acceptor, via a covalent intermediatewith the cofactor thiamine pyrophosphate.{ECO:0000269|PubMed:27259054}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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FusionGeneSequence for PBRM1_TKT |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_PBRM1_ENST00000356770_chr3_52692215_-_TKT_ENST00000423525_chr3_53276258_-_215aa MGSKRRRATSPSSSVSGDFDDGHHSVSTPGPSRKRRRLSNLPTVDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQ PIDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKSYYKPDSPEYKAACKLWDLYLRTRNEFVQKGEADDEDDDEDGQDNQGTVTEGSSPA >In-frame_PBRM1_ENST00000394830_chr3_52692215_-_TKT_ENST00000462138_chr3_53276258_-_803aa MGSKRRRATSPSSSVSGDFDDGHHSVSTPGPSRKRRRLSNLPTVDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQ PIDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKSYYKPDSPEYKAACKLWDLYLRTRNEFVQKGEADDEDDDEDGQDNQGTVTEGSSPA YLKEILEQLLEAIVVATNPSGRLISELFQKLPSKVPPHVMLQRRRDHGCPLFPHHALQVPGPPESAQXPLCALQGPCSSHPLRGLGXSWF PGRGGAAEPEEDQLRLGRAPGPETSFHRRGHWLPGPGPRGRLWDGLHRQILRQGQLPSLLLAGRRGAVRGLCMGGHGLRQHLXAGQPCGH SRHQSPGPEXPGPTAAPDGHLPEAVRGLRLACHHRGWTQRGGAVQGLWPGQAPANSHHCQDLQGPRDHGGRRXGVLAWEAPPQKHGXADH PGDLQPDPEQKEDPGNPSTGGRTLSGHCQHPHAQPAQLQSWGQDSHPQGLRAGTGQAGPCQXPHHRPGWGHQKFHLLGDLQKGAPGPLHR VLHCXAEHGEHRGGLCHPQQDGALLQHFCSLLHAGLXPDSHGRHLREQHQPLRLPLRRFHRGRRALPDGPRRSGYVSVSPHINCLLPKXW RCYREGSGTSRQYKGYLLHPDQPPRKCHHLXQQXGLPGRTSQGGPEEQGXPGDRYRGWGDPARGLGRCRTAEERKDQHPRAGPLHHQAPG >In-frame_PBRM1_ENST00000296302_chr3_52692215_-_TKT_ENST00000423525_chr3_53276258_-_215aa MGSKRRRATSPSSSVSGDFDDGHHSVSTPGPSRKRRRLSNLPTVDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQ PIDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKSYYKPDSPEYKAACKLWDLYLRTRNEFVQKGEADDEDDDEDGQDNQGTVTEGSSPA >In-frame_PBRM1_ENST00000337303_chr3_52692215_-_TKT_ENST00000423525_chr3_53276258_-_215aa MGSKRRRATSPSSSVSGDFDDGHHSVSTPGPSRKRRRLSNLPTVDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQ PIDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKSYYKPDSPEYKAACKLWDLYLRTRNEFVQKGEADDEDDDEDGQDNQGTVTEGSSPA >In-frame_PBRM1_ENST00000410007_chr3_52692215_-_TKT_ENST00000423525_chr3_53276258_-_215aa MGSKRRRATSPSSSVSGDFDDGHHSVSTPGPSRKRRRLSNLPTVDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQ PIDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKSYYKPDSPEYKAACKLWDLYLRTRNEFVQKGEADDEDDDEDGQDNQGTVTEGSSPA >In-frame_PBRM1_ENST00000409057_chr3_52692215_-_TKT_ENST00000423525_chr3_53276258_-_215aa MGSKRRRATSPSSSVSGDFDDGHHSVSTPGPSRKRRRLSNLPTVDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQ PIDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKSYYKPDSPEYKAACKLWDLYLRTRNEFVQKGEADDEDDDEDGQDNQGTVTEGSSPA >In-frame_PBRM1_ENST00000409114_chr3_52692215_-_TKT_ENST00000423525_chr3_53276258_-_215aa MGSKRRRATSPSSSVSGDFDDGHHSVSTPGPSRKRRRLSNLPTVDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQ PIDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKSYYKPDSPEYKAACKLWDLYLRTRNEFVQKGEADDEDDDEDGQDNQGTVTEGSSPA >In-frame_PBRM1_ENST00000409767_chr3_52692215_-_TKT_ENST00000423525_chr3_53276258_-_215aa MGSKRRRATSPSSSVSGDFDDGHHSVSTPGPSRKRRRLSNLPTVDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQ PIDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKSYYKPDSPEYKAACKLWDLYLRTRNEFVQKGEADDEDDDEDGQDNQGTVTEGSSPA |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_PBRM1_ENST00000356770_chr3_52692215_-_TKT_ENST00000423525_chr3_53276258_-_645nt ATGGGTTCCAAGAGAAGAAGAGCTACCTCCCCTTCCAGCAGTGTCAGCGGGGACTTTGATGATGGGCACCATTCTGTGTCAACACCAGGC CCAAGCAGGAAAAGGAGGAGACTTTCCAATCTTCCAACTGTAGATCCTATTGCCGTGTGCCATGAACTCTATAATACCATCCGAGACTAT AAGGATGAACAGGGCAGACTTCTCTGTGAGCTCTTCATTAGGGCACCAAAGCGAAGAAATCAACCAGACTATTATGAAGTGGTTTCTCAG CCCATTGACTTGATGAAAATCCAACAGAAACTAAAAATGGAAGAGTATGATGATGTTAATTTGCTGACTGCTGACTTCCAGCTTCTTTTT AACAATGCAAAGTCCTATTATAAGCCAGATTCTCCTGAATATAAAGCCGCTTGCAAACTCTGGGATTTGTACCTTCGAACAAGAAATGAG TTTGTTCAGAAAGGAGAAGCAGATGACGAAGATGATGATGAAGATGGGCAAGACAATCAGGGCACAGTGACTGAAGGATCTTCTCCAGCT TACTTGAAGGAGATCCTGGAGCAGCTTCTTGAAGCCATAGTTGTAGCTACAAATCCATCAGGACGTCTCATTAGCGAACTTTTTCAGAAA >In-frame_PBRM1_ENST00000394830_chr3_52692215_-_TKT_ENST00000462138_chr3_53276258_-_2410nt ATGGGTTCCAAGAGAAGAAGAGCTACCTCCCCTTCCAGCAGTGTCAGCGGGGACTTTGATGATGGGCACCATTCTGTGTCAACACCAGGC CCAAGCAGGAAAAGGAGGAGACTTTCCAATCTTCCAACTGTAGATCCTATTGCCGTGTGCCATGAACTCTATAATACCATCCGAGACTAT AAGGATGAACAGGGCAGACTTCTCTGTGAGCTCTTCATTAGGGCACCAAAGCGAAGAAATCAACCAGACTATTATGAAGTGGTTTCTCAG CCCATTGACTTGATGAAAATCCAACAGAAACTAAAAATGGAAGAGTATGATGATGTTAATTTGCTGACTGCTGACTTCCAGCTTCTTTTT AACAATGCAAAGTCCTATTATAAGCCAGATTCTCCTGAATATAAAGCCGCTTGCAAACTCTGGGATTTGTACCTTCGAACAAGAAATGAG TTTGTTCAGAAAGGAGAAGCAGATGACGAAGATGATGATGAAGATGGGCAAGACAATCAGGGCACAGTGACTGAAGGATCTTCTCCAGCT TACTTGAAGGAGATCCTGGAGCAGCTTCTTGAAGCCATAGTTGTAGCTACAAATCCATCAGGACGTCTCATTAGCGAACTTTTTCAGAAA CTGCCTTCTAAAGTGCCACCCCACGTCATGCTGCAGCGCCGCAGAGATCATGGCTGTCCTCTTTTTCCACACCATGCGCTACAAGTCCCA GGACCCCCGGAATCCGCACAATGACCGCTTTGTGCTCTCCAAGGGCCATGCAGCTCCCATCCTCTACGCGGTCTGGGCTGAAGCTGGTTT CCTGGCCGAGGCGGAGCTGCTGAACCTGAGGAAGATCAGCTCCGACTTGGACGGGCACCCGGTCCCGAAACAAGCTTTCACCGACGTGGC CACTGGCTCCCTGGGCCAGGGCCTCGGGGCCGCTTGTGGGATGGCCTACACCGGCAAATACTTCGACAAGGCCAGCTACCGAGTCTATTG CTTGCTGGGAGACGGGGAGCTGTCAGAGGGCTCTGTATGGGAGGCCATGGCCTTCGCCAGCATCTATAAGCTGGACAACCTTGTGGCCAT TCTAGACATCAATCGCCTGGGCCAGAGTGACCCGGCCCCACTGCAGCACCAGATGGACATCTACCAGAAGCGGTGCGAGGCCTTCGGTTG GCATGCCATCATCGTGGATGGACACAGCGTGGAGGAGCTGTGCAAGGCCTTTGGCCAGGCCAAGCACCAGCCAACAGCCATCATTGCCAA GACCTTCAAGGGCCGAGGGATCACGGGGGTAGAAGATAAGGAGTCTTGGCATGGGAAGCCCCTCCCCAAAAACATGGCTGAGCAGATCAT CCAGGAGATCTACAGCCAGATCCAGAGCAAAAAGAAGATCCTGGCAACCCCTCCACAGGAGGACGCACCCTCAGTGGACATTGCCAACAT CCGCATGCCCAGCCTGCCCAGCTACAAAGTTGGGGACAAGATAGCCACCCGCAAGGCCTACGGGCAGGCACTGGCCAAGCTGGGCCATGC CAGTGACCGCATCATCGCCCTGGATGGGGACACCAAAAATTCCACCTTCTCGGAGATCTTCAAAAAGGAGCACCCGGACCGCTTCATCGA GTGCTACATTGCTGAGCAGAACATGGTGAGCATCGCGGTGGGCTGTGCCACCCGCAACAGGACGGTGCCCTTCTGCAGCACTTTTGCAGC CTTCTTCACGCGGGCCTTTGACCAGATTCGCATGGCCGCCATCTCCGAGAGCAACATCAACCTCTGCGGCTCCCACTGCGGCGTTTCCAT CGGGGAAGACGGGCCCTCCCAGATGGCCCTAGAAGATCTGGCTATGTTTCGGTCAGTCCCCACATCAACTGTCTTTTACCCAAGTGATGG CGTTGCTACAGAGAAGGCAGTGGAACTAGCCGCCAATACAAAGGGTATCTGCTTCATCCGGACCAGCCGCCCAGAAAATGCCATCATCTA TAACAACAATGAGGACTTCCAGGTCGGACAAGCCAAGGTGGTCCTGAAGAGCAAGGATGACCAGGTGACCGTTATCGGGGCTGGGGTGAC CCTGCACGAGGCCTTGGCCGCTGCCGAACTGCTGAAGAAAGAAAAGATCAACATCCGCGTGCTGGACCCCTTCACCATCAAGCCCCTGGA CAGAAAACTCATTCTCGACAGCGCTCGTGCCACCAAGGGCAGGATCCTCACCGTGGAGGACCATTATTATGAAGGTGGCATTGGTGAGGC TGTGTCCAGTGCAGTAGTGGGCGAGCCTGGCATCACTGTCACCCACCTGGCAGTTAACCGGGTACCAAGAAGTGGGAAGCCGGCTGAGCT >In-frame_PBRM1_ENST00000296302_chr3_52692215_-_TKT_ENST00000423525_chr3_53276258_-_645nt ATGGGTTCCAAGAGAAGAAGAGCTACCTCCCCTTCCAGCAGTGTCAGCGGGGACTTTGATGATGGGCACCATTCTGTGTCAACACCAGGC CCAAGCAGGAAAAGGAGGAGACTTTCCAATCTTCCAACTGTAGATCCTATTGCCGTGTGCCATGAACTCTATAATACCATCCGAGACTAT AAGGATGAACAGGGCAGACTTCTCTGTGAGCTCTTCATTAGGGCACCAAAGCGAAGAAATCAACCAGACTATTATGAAGTGGTTTCTCAG CCCATTGACTTGATGAAAATCCAACAGAAACTAAAAATGGAAGAGTATGATGATGTTAATTTGCTGACTGCTGACTTCCAGCTTCTTTTT AACAATGCAAAGTCCTATTATAAGCCAGATTCTCCTGAATATAAAGCCGCTTGCAAACTCTGGGATTTGTACCTTCGAACAAGAAATGAG TTTGTTCAGAAAGGAGAAGCAGATGACGAAGATGATGATGAAGATGGGCAAGACAATCAGGGCACAGTGACTGAAGGATCTTCTCCAGCT TACTTGAAGGAGATCCTGGAGCAGCTTCTTGAAGCCATAGTTGTAGCTACAAATCCATCAGGACGTCTCATTAGCGAACTTTTTCAGAAA >In-frame_PBRM1_ENST00000337303_chr3_52692215_-_TKT_ENST00000423525_chr3_53276258_-_645nt ATGGGTTCCAAGAGAAGAAGAGCTACCTCCCCTTCCAGCAGTGTCAGCGGGGACTTTGATGATGGGCACCATTCTGTGTCAACACCAGGC CCAAGCAGGAAAAGGAGGAGACTTTCCAATCTTCCAACTGTAGATCCTATTGCCGTGTGCCATGAACTCTATAATACCATCCGAGACTAT AAGGATGAACAGGGCAGACTTCTCTGTGAGCTCTTCATTAGGGCACCAAAGCGAAGAAATCAACCAGACTATTATGAAGTGGTTTCTCAG CCCATTGACTTGATGAAAATCCAACAGAAACTAAAAATGGAAGAGTATGATGATGTTAATTTGCTGACTGCTGACTTCCAGCTTCTTTTT AACAATGCAAAGTCCTATTATAAGCCAGATTCTCCTGAATATAAAGCCGCTTGCAAACTCTGGGATTTGTACCTTCGAACAAGAAATGAG TTTGTTCAGAAAGGAGAAGCAGATGACGAAGATGATGATGAAGATGGGCAAGACAATCAGGGCACAGTGACTGAAGGATCTTCTCCAGCT TACTTGAAGGAGATCCTGGAGCAGCTTCTTGAAGCCATAGTTGTAGCTACAAATCCATCAGGACGTCTCATTAGCGAACTTTTTCAGAAA >In-frame_PBRM1_ENST00000410007_chr3_52692215_-_TKT_ENST00000423525_chr3_53276258_-_645nt ATGGGTTCCAAGAGAAGAAGAGCTACCTCCCCTTCCAGCAGTGTCAGCGGGGACTTTGATGATGGGCACCATTCTGTGTCAACACCAGGC CCAAGCAGGAAAAGGAGGAGACTTTCCAATCTTCCAACTGTAGATCCTATTGCCGTGTGCCATGAACTCTATAATACCATCCGAGACTAT AAGGATGAACAGGGCAGACTTCTCTGTGAGCTCTTCATTAGGGCACCAAAGCGAAGAAATCAACCAGACTATTATGAAGTGGTTTCTCAG CCCATTGACTTGATGAAAATCCAACAGAAACTAAAAATGGAAGAGTATGATGATGTTAATTTGCTGACTGCTGACTTCCAGCTTCTTTTT AACAATGCAAAGTCCTATTATAAGCCAGATTCTCCTGAATATAAAGCCGCTTGCAAACTCTGGGATTTGTACCTTCGAACAAGAAATGAG TTTGTTCAGAAAGGAGAAGCAGATGACGAAGATGATGATGAAGATGGGCAAGACAATCAGGGCACAGTGACTGAAGGATCTTCTCCAGCT TACTTGAAGGAGATCCTGGAGCAGCTTCTTGAAGCCATAGTTGTAGCTACAAATCCATCAGGACGTCTCATTAGCGAACTTTTTCAGAAA >In-frame_PBRM1_ENST00000409057_chr3_52692215_-_TKT_ENST00000423525_chr3_53276258_-_645nt ATGGGTTCCAAGAGAAGAAGAGCTACCTCCCCTTCCAGCAGTGTCAGCGGGGACTTTGATGATGGGCACCATTCTGTGTCAACACCAGGC CCAAGCAGGAAAAGGAGGAGACTTTCCAATCTTCCAACTGTAGATCCTATTGCCGTGTGCCATGAACTCTATAATACCATCCGAGACTAT AAGGATGAACAGGGCAGACTTCTCTGTGAGCTCTTCATTAGGGCACCAAAGCGAAGAAATCAACCAGACTATTATGAAGTGGTTTCTCAG CCCATTGACTTGATGAAAATCCAACAGAAACTAAAAATGGAAGAGTATGATGATGTTAATTTGCTGACTGCTGACTTCCAGCTTCTTTTT AACAATGCAAAGTCCTATTATAAGCCAGATTCTCCTGAATATAAAGCCGCTTGCAAACTCTGGGATTTGTACCTTCGAACAAGAAATGAG TTTGTTCAGAAAGGAGAAGCAGATGACGAAGATGATGATGAAGATGGGCAAGACAATCAGGGCACAGTGACTGAAGGATCTTCTCCAGCT TACTTGAAGGAGATCCTGGAGCAGCTTCTTGAAGCCATAGTTGTAGCTACAAATCCATCAGGACGTCTCATTAGCGAACTTTTTCAGAAA >In-frame_PBRM1_ENST00000409114_chr3_52692215_-_TKT_ENST00000423525_chr3_53276258_-_645nt ATGGGTTCCAAGAGAAGAAGAGCTACCTCCCCTTCCAGCAGTGTCAGCGGGGACTTTGATGATGGGCACCATTCTGTGTCAACACCAGGC CCAAGCAGGAAAAGGAGGAGACTTTCCAATCTTCCAACTGTAGATCCTATTGCCGTGTGCCATGAACTCTATAATACCATCCGAGACTAT AAGGATGAACAGGGCAGACTTCTCTGTGAGCTCTTCATTAGGGCACCAAAGCGAAGAAATCAACCAGACTATTATGAAGTGGTTTCTCAG CCCATTGACTTGATGAAAATCCAACAGAAACTAAAAATGGAAGAGTATGATGATGTTAATTTGCTGACTGCTGACTTCCAGCTTCTTTTT AACAATGCAAAGTCCTATTATAAGCCAGATTCTCCTGAATATAAAGCCGCTTGCAAACTCTGGGATTTGTACCTTCGAACAAGAAATGAG TTTGTTCAGAAAGGAGAAGCAGATGACGAAGATGATGATGAAGATGGGCAAGACAATCAGGGCACAGTGACTGAAGGATCTTCTCCAGCT TACTTGAAGGAGATCCTGGAGCAGCTTCTTGAAGCCATAGTTGTAGCTACAAATCCATCAGGACGTCTCATTAGCGAACTTTTTCAGAAA >In-frame_PBRM1_ENST00000409767_chr3_52692215_-_TKT_ENST00000423525_chr3_53276258_-_645nt ATGGGTTCCAAGAGAAGAAGAGCTACCTCCCCTTCCAGCAGTGTCAGCGGGGACTTTGATGATGGGCACCATTCTGTGTCAACACCAGGC CCAAGCAGGAAAAGGAGGAGACTTTCCAATCTTCCAACTGTAGATCCTATTGCCGTGTGCCATGAACTCTATAATACCATCCGAGACTAT AAGGATGAACAGGGCAGACTTCTCTGTGAGCTCTTCATTAGGGCACCAAAGCGAAGAAATCAACCAGACTATTATGAAGTGGTTTCTCAG CCCATTGACTTGATGAAAATCCAACAGAAACTAAAAATGGAAGAGTATGATGATGTTAATTTGCTGACTGCTGACTTCCAGCTTCTTTTT AACAATGCAAAGTCCTATTATAAGCCAGATTCTCCTGAATATAAAGCCGCTTGCAAACTCTGGGATTTGTACCTTCGAACAAGAAATGAG TTTGTTCAGAAAGGAGAAGCAGATGACGAAGATGATGATGAAGATGGGCAAGACAATCAGGGCACAGTGACTGAAGGATCTTCTCCAGCT TACTTGAAGGAGATCCTGGAGCAGCTTCTTGAAGCCATAGTTGTAGCTACAAATCCATCAGGACGTCTCATTAGCGAACTTTTTCAGAAA |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_PBRM1_ENST00000356770_chr3_52692215_-_TKT_ENST00000423525_chr3_53276258_-_3314nt TCCATGGGTTCCAAGAGAAGAAGAGCTACCTCCCCTTCCAGCAGTGTCAGCGGGGACTTTGATGATGGGCACCATTCTGTGTCAACACCA GGCCCAAGCAGGAAAAGGAGGAGACTTTCCAATCTTCCAACTGTAGATCCTATTGCCGTGTGCCATGAACTCTATAATACCATCCGAGAC TATAAGGATGAACAGGGCAGACTTCTCTGTGAGCTCTTCATTAGGGCACCAAAGCGAAGAAATCAACCAGACTATTATGAAGTGGTTTCT CAGCCCATTGACTTGATGAAAATCCAACAGAAACTAAAAATGGAAGAGTATGATGATGTTAATTTGCTGACTGCTGACTTCCAGCTTCTT TTTAACAATGCAAAGTCCTATTATAAGCCAGATTCTCCTGAATATAAAGCCGCTTGCAAACTCTGGGATTTGTACCTTCGAACAAGAAAT GAGTTTGTTCAGAAAGGAGAAGCAGATGACGAAGATGATGATGAAGATGGGCAAGACAATCAGGGCACAGTGACTGAAGGATCTTCTCCA GCTTACTTGAAGGAGATCCTGGAGCAGCTTCTTGAAGCCATAGTTGTAGCTACAAATCCATCAGGACGTCTCATTAGCGAACTTTTTCAG AAACTGCCTTCTAAAGTGCCACCCCACGTCATGCTGCAGCGCCGCAGAGATCATGGCTGTCCTCTTTTTCCACACCATGCGCTACAAGTC CCAGGACCCCCGGAATCCGCACAATGACCGCTTTGTGCTCTCCAAGGGCCATGCAGCTCCCATCCTCTACGCGGTCTGGGCTGAAGCTGG TTTCCTGGCCGAGGCGGAGCTGCTGAACCTGAGGAAGATCAGCTCCGACTTGGACGGGCACCCGGTCCCGAAACAAGCTTTCACCGACGT GGCCACTGGCTCCCTGGGCCAGGGCCTCGGGGCCGCTTGTGGGATGGCCTACACCGGCAAATACTTCGACAAGGCCAGCTACCGAGTCTA TTGCTTGCTGGGAGACGGGGAGCTGTCAGAGGGCTCTGTATGGGAGGCCATGGCCTTCGCCAGCATCTATAAGCTGGACAACCTTGTGGC CATTCTAGACATCAATCGCCTGGGCCAGAGTGACCCGGCCCCACTGCAGCACCAGATGGACATCTACCAGAAGCGGTGCGAGGCCTTCGG TTGGCATGCCATCATCGTGGATGGACACAGCGTGGAGGAGCTGTGCAAGGCCTTTGGCCAGGCCAAGCACCAGCCAACAGCCATCATTGC CAAGACCTTCAAGGGCCGAGGGATCACGGGGGTAGAAGATAAGGAGTCTTGGCATGGGAAGCCCCTCCCCAAAAACATGGCTGAGCAGAT CATCCAGGAGATCTACAGCCAGATCCAGAGCAAAAAGAAGATCCTGGCAACCCCTCCACAGGAGGACGCACCCTCAGTGGACATTGCCAA CATCCGCATGCCCAGCCTGCCCAGCTACAAAGTTGGGGACAAGATAGCCACCCGCAAGGCCTACGGGCAGGCACTGGCCAAGCTGGGCCA TGCCAGTGACCGCATCATCGCCCTGGATGGGGACACCAAAAATTCCACCTTCTCGGAGATCTTCAAAAAGGAGCACCCGGACCGCTTCAT CGAGTGCTACATTGCTGAGCAGAACATGGTGAGCATCGCGGTGGGCTGTGCCACCCGCAACAGGACGGTGCCCTTCTGCAGCACTTTTGC AGCCTTCTTCACGCGGGCCTTTGACCAGATTCGCATGGCCGCCATCTCCGAGAGCAACATCAACCTCTGCGGCTCCCACTGCGGCGTTTC CATCGGGGAAGACGGGCCCTCCCAGATGGCCCTAGAAGATCTGGCTATGTTTCGGTCAGTCCCCACATCAACTGTCTTTTACCCAAGTGA TGGCGTTGCTACAGAGAAGGCAGTGGAACTAGCCGCCAATACAAAGGGTATCTGCTTCATCCGGACCAGCCGCCCAGAAAATGCCATCAT CTATAACAACAATGAGGACTTCCAGGTCGGACAAGCCAAGGTGGTCCTGAAGAGCAAGGATGACCAGGTGACCGTTATCGGGGCTGGGGT GACCCTGCACGAGGCCTTGGCCGCTGCCGAACTGCTGAAGAAAGAAAAGATCAACATCCGCGTGCTGGACCCCTTCACCATCAAGCCCCT GGACAGAAAACTCATTCTCGACAGCGCTCGTGCCACCAAGGGCAGGATCCTCACCGTGGAGGACCATTATTATGAAGGTGGCATTGGTGA GGCTGTGTCCAGTGCAGTAGTGGGCGAGCCTGGCATCACTGTCACCCACCTGGCAGTTAACCGGGTACCAAGAAGTGGGAAGCCGGCTGA GCTGCTGAAGATGTTTGGTATCGACAGGGATGCCATTGCACAAGCTGTGAGGGGCCTCATCACCAAGGCCTAGGGCGGCCAGTGCAGGTT CTGGGGAAGAAGCGTGGAGGGTGCGCTAGGGAGGCTGGTGTCCTTGGTCCTGGGCCAGGACCTGGGTGTCCCAAGTCCCCTTGGAATCAC CTGCAACTGCCCTCAACCTCCAGAACTATCGCTGCCTCCCATTCATCACCAGGTGACATTTGACTGCAACCTGCCTTCTAGCTGAGAGGC TGAGACCTACATCCCTCATTGTGACCTCAGTCCACCTGGCCCTGAGCGGGCTGGGGAACTGCCTCAGTCTGGAAGCTGACCAGGCACTCT CAGGGCCGCCCCACCTCCCCCAAGTCCCCACAGCCTTGCAGTCAGGTCTCCTGGGATAGGGAGGTTCACTTGCTTGTTGTCCCTCGTCCT TGTCATATCCTTTTAACTAGGCATCTCAGAGAAGCAGAGACAGGGCAGCCTTCGTCCTGGGGGAAAAGGGACCCTCAGGATGGCATGAGA GGTCCTCAATCCCAAGTGTGGAACTGTCCCCCTCAACTTGTTAAAATGCAGATTTCTGGGTCTTGCCAATGGGGCCTGGGACTCCATGTG ACAACTGGCCCAGGAGCTTCTGATGTCACACAGAATTCTGCAGTCCCAAGCTCCAGCCCCGACCTGCTCTGCTGTTCCTAGGTGACTGCC CTCACACTGCTGACCACAGTGGATTTCTCCCCCTGCTGCTCGGGCTCAGCTGGGGTCAGCCCTGCTTATAAGGTCAACTGTGCAAAACCT TATACTGGCCAAGAACAAACTAGTGCTGGGGGAGGAGGGCTGGGTGCCCCGGCCACTGGTGGAGTCCCCAGGAAATCCTCAGAGCTGTTG >In-frame_PBRM1_ENST00000394830_chr3_52692215_-_TKT_ENST00000462138_chr3_53276258_-_3559nt AGGAGCAATAGCAGCAGCCGTGGCGGCCACGGGGCGGGGCGCGGCGGTCGGTGACCGCGGCCGGGGCTGCAGGCGGCGGAGCGGCTGGAA GTTGGATTCCATGGGTTCCAAGAGAAGAAGAGCTACCTCCCCTTCCAGCAGTGTCAGCGGGGACTTTGATGATGGGCACCATTCTGTGTC AACACCAGGCCCAAGCAGGAAAAGGAGGAGACTTTCCAATCTTCCAACTGTAGATCCTATTGCCGTGTGCCATGAACTCTATAATACCAT CCGAGACTATAAGGATGAACAGGGCAGACTTCTCTGTGAGCTCTTCATTAGGGCACCAAAGCGAAGAAATCAACCAGACTATTATGAAGT GGTTTCTCAGCCCATTGACTTGATGAAAATCCAACAGAAACTAAAAATGGAAGAGTATGATGATGTTAATTTGCTGACTGCTGACTTCCA GCTTCTTTTTAACAATGCAAAGTCCTATTATAAGCCAGATTCTCCTGAATATAAAGCCGCTTGCAAACTCTGGGATTTGTACCTTCGAAC AAGAAATGAGTTTGTTCAGAAAGGAGAAGCAGATGACGAAGATGATGATGAAGATGGGCAAGACAATCAGGGCACAGTGACTGAAGGATC TTCTCCAGCTTACTTGAAGGAGATCCTGGAGCAGCTTCTTGAAGCCATAGTTGTAGCTACAAATCCATCAGGACGTCTCATTAGCGAACT TTTTCAGAAACTGCCTTCTAAAGTGCCACCCCACGTCATGCTGCAGCGCCGCAGAGATCATGGCTGTCCTCTTTTTCCACACCATGCGCT ACAAGTCCCAGGACCCCCGGAATCCGCACAATGACCGCTTTGTGCTCTCCAAGGGCCATGCAGCTCCCATCCTCTACGCGGTCTGGGCTG AAGCTGGTTTCCTGGCCGAGGCGGAGCTGCTGAACCTGAGGAAGATCAGCTCCGACTTGGACGGGCACCCGGTCCCGAAACAAGCTTTCA CCGACGTGGCCACTGGCTCCCTGGGCCAGGGCCTCGGGGCCGCTTGTGGGATGGCCTACACCGGCAAATACTTCGACAAGGCCAGCTACC GAGTCTATTGCTTGCTGGGAGACGGGGAGCTGTCAGAGGGCTCTGTATGGGAGGCCATGGCCTTCGCCAGCATCTATAAGCTGGACAACC TTGTGGCCATTCTAGACATCAATCGCCTGGGCCAGAGTGACCCGGCCCCACTGCAGCACCAGATGGACATCTACCAGAAGCGGTGCGAGG CCTTCGGTTGGCATGCCATCATCGTGGATGGACACAGCGTGGAGGAGCTGTGCAAGGCCTTTGGCCAGGCCAAGCACCAGCCAACAGCCA TCATTGCCAAGACCTTCAAGGGCCGAGGGATCACGGGGGTAGAAGATAAGGAGTCTTGGCATGGGAAGCCCCTCCCCAAAAACATGGCTG AGCAGATCATCCAGGAGATCTACAGCCAGATCCAGAGCAAAAAGAAGATCCTGGCAACCCCTCCACAGGAGGACGCACCCTCAGTGGACA TTGCCAACATCCGCATGCCCAGCCTGCCCAGCTACAAAGTTGGGGACAAGATAGCCACCCGCAAGGCCTACGGGCAGGCACTGGCCAAGC TGGGCCATGCCAGTGACCGCATCATCGCCCTGGATGGGGACACCAAAAATTCCACCTTCTCGGAGATCTTCAAAAAGGAGCACCCGGACC GCTTCATCGAGTGCTACATTGCTGAGCAGAACATGGTGAGCATCGCGGTGGGCTGTGCCACCCGCAACAGGACGGTGCCCTTCTGCAGCA CTTTTGCAGCCTTCTTCACGCGGGCCTTTGACCAGATTCGCATGGCCGCCATCTCCGAGAGCAACATCAACCTCTGCGGCTCCCACTGCG GCGTTTCCATCGGGGAAGACGGGCCCTCCCAGATGGCCCTAGAAGATCTGGCTATGTTTCGGTCAGTCCCCACATCAACTGTCTTTTACC CAAGTGATGGCGTTGCTACAGAGAAGGCAGTGGAACTAGCCGCCAATACAAAGGGTATCTGCTTCATCCGGACCAGCCGCCCAGAAAATG CCATCATCTATAACAACAATGAGGACTTCCAGGTCGGACAAGCCAAGGTGGTCCTGAAGAGCAAGGATGACCAGGTGACCGTTATCGGGG CTGGGGTGACCCTGCACGAGGCCTTGGCCGCTGCCGAACTGCTGAAGAAAGAAAAGATCAACATCCGCGTGCTGGACCCCTTCACCATCA AGCCCCTGGACAGAAAACTCATTCTCGACAGCGCTCGTGCCACCAAGGGCAGGATCCTCACCGTGGAGGACCATTATTATGAAGGTGGCA TTGGTGAGGCTGTGTCCAGTGCAGTAGTGGGCGAGCCTGGCATCACTGTCACCCACCTGGCAGTTAACCGGGTACCAAGAAGTGGGAAGC CGGCTGAGCTGCTGAAGATGTTTGGTATCGACAGGGATGCCATTGCACAAGCTGTGAGGGGCCTCATCACCAAGGCCTAGGGCGGGTATG AAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGTTTTGAGA AAAATGAATTGGCCCTGAAATGTTTTCTTTTTTGATGTGTTTGCAGCCAGTGCAGGTTCTGGGGAAGAAGCGTGGAGGGTGCGCTAGGGA GGCTGGTGTCCTTGGTCCTGGGCCAGGACCTGGGTGTCCCAAGTCCCCTTGGAATCACCTGCAACTGCCCTCAACCTCCAGAACTATCGC TGCCTCCCATTCATCACCAGGTGACATTTGACTGCAACCTGCCTTCTAGCTGAGAGGCTGAGACCTACATCCCTCATTGTGACCTCAGTC CACCTGGCCCTGAGCGGGCTGGGGAACTGCCTCAGTCTGGAAGCTGACCAGGCACTCTCAGGGCCGCCCCACCTCCCCCAAGTCCCCACA GCCTTGCAGTCAGGTCTCCTGGGATAGGGAGGTTCACTTGCTTGTTGTCCCTCGTCCTTGTCATATCCTTTTAACTAGGCATCTCAGAGA AGCAGAGACAGGGCAGCCTTCGTCCTGGGGGAAAAGGGACCCTCAGGATGGCATGAGAGGTCCTCAATCCCAAGTGTGGAACTGTCCCCC TCAACTTGTTAAAATGCAGATTTCTGGGTCTTGCCAATGGGGCCTGGGACTCCATGTGACAACTGGCCCAGGAGCTTCTGATGTCACACA GAATTCTGCAGTCCCAAGCTCCAGCCCCGACCTGCTCTGCTGTTCCTAGGTGACTGCCCTCACACTGCTGACCACAGTGGATTTCTCCCC CTGCTGCTCGGGCTCAGCTGGGGTCAGCCCTGCTTATAAGGTCAACTGTGCAAAACCTTATACTGGCCAAGAACAAACTAGTGCTGGGGG AGGAGGGCTGGGTGCCCCGGCCACTGGTGGAGTCCCCAGGAAATCCTCAGAGCTGTTGCGAGGATGAGACACATTTGTGGACACGTCCAC >In-frame_PBRM1_ENST00000296302_chr3_52692215_-_TKT_ENST00000423525_chr3_53276258_-_3313nt CCATGGGTTCCAAGAGAAGAAGAGCTACCTCCCCTTCCAGCAGTGTCAGCGGGGACTTTGATGATGGGCACCATTCTGTGTCAACACCAG GCCCAAGCAGGAAAAGGAGGAGACTTTCCAATCTTCCAACTGTAGATCCTATTGCCGTGTGCCATGAACTCTATAATACCATCCGAGACT ATAAGGATGAACAGGGCAGACTTCTCTGTGAGCTCTTCATTAGGGCACCAAAGCGAAGAAATCAACCAGACTATTATGAAGTGGTTTCTC AGCCCATTGACTTGATGAAAATCCAACAGAAACTAAAAATGGAAGAGTATGATGATGTTAATTTGCTGACTGCTGACTTCCAGCTTCTTT TTAACAATGCAAAGTCCTATTATAAGCCAGATTCTCCTGAATATAAAGCCGCTTGCAAACTCTGGGATTTGTACCTTCGAACAAGAAATG AGTTTGTTCAGAAAGGAGAAGCAGATGACGAAGATGATGATGAAGATGGGCAAGACAATCAGGGCACAGTGACTGAAGGATCTTCTCCAG CTTACTTGAAGGAGATCCTGGAGCAGCTTCTTGAAGCCATAGTTGTAGCTACAAATCCATCAGGACGTCTCATTAGCGAACTTTTTCAGA AACTGCCTTCTAAAGTGCCACCCCACGTCATGCTGCAGCGCCGCAGAGATCATGGCTGTCCTCTTTTTCCACACCATGCGCTACAAGTCC CAGGACCCCCGGAATCCGCACAATGACCGCTTTGTGCTCTCCAAGGGCCATGCAGCTCCCATCCTCTACGCGGTCTGGGCTGAAGCTGGT TTCCTGGCCGAGGCGGAGCTGCTGAACCTGAGGAAGATCAGCTCCGACTTGGACGGGCACCCGGTCCCGAAACAAGCTTTCACCGACGTG GCCACTGGCTCCCTGGGCCAGGGCCTCGGGGCCGCTTGTGGGATGGCCTACACCGGCAAATACTTCGACAAGGCCAGCTACCGAGTCTAT TGCTTGCTGGGAGACGGGGAGCTGTCAGAGGGCTCTGTATGGGAGGCCATGGCCTTCGCCAGCATCTATAAGCTGGACAACCTTGTGGCC ATTCTAGACATCAATCGCCTGGGCCAGAGTGACCCGGCCCCACTGCAGCACCAGATGGACATCTACCAGAAGCGGTGCGAGGCCTTCGGT TGGCATGCCATCATCGTGGATGGACACAGCGTGGAGGAGCTGTGCAAGGCCTTTGGCCAGGCCAAGCACCAGCCAACAGCCATCATTGCC AAGACCTTCAAGGGCCGAGGGATCACGGGGGTAGAAGATAAGGAGTCTTGGCATGGGAAGCCCCTCCCCAAAAACATGGCTGAGCAGATC ATCCAGGAGATCTACAGCCAGATCCAGAGCAAAAAGAAGATCCTGGCAACCCCTCCACAGGAGGACGCACCCTCAGTGGACATTGCCAAC ATCCGCATGCCCAGCCTGCCCAGCTACAAAGTTGGGGACAAGATAGCCACCCGCAAGGCCTACGGGCAGGCACTGGCCAAGCTGGGCCAT GCCAGTGACCGCATCATCGCCCTGGATGGGGACACCAAAAATTCCACCTTCTCGGAGATCTTCAAAAAGGAGCACCCGGACCGCTTCATC GAGTGCTACATTGCTGAGCAGAACATGGTGAGCATCGCGGTGGGCTGTGCCACCCGCAACAGGACGGTGCCCTTCTGCAGCACTTTTGCA GCCTTCTTCACGCGGGCCTTTGACCAGATTCGCATGGCCGCCATCTCCGAGAGCAACATCAACCTCTGCGGCTCCCACTGCGGCGTTTCC ATCGGGGAAGACGGGCCCTCCCAGATGGCCCTAGAAGATCTGGCTATGTTTCGGTCAGTCCCCACATCAACTGTCTTTTACCCAAGTGAT GGCGTTGCTACAGAGAAGGCAGTGGAACTAGCCGCCAATACAAAGGGTATCTGCTTCATCCGGACCAGCCGCCCAGAAAATGCCATCATC TATAACAACAATGAGGACTTCCAGGTCGGACAAGCCAAGGTGGTCCTGAAGAGCAAGGATGACCAGGTGACCGTTATCGGGGCTGGGGTG ACCCTGCACGAGGCCTTGGCCGCTGCCGAACTGCTGAAGAAAGAAAAGATCAACATCCGCGTGCTGGACCCCTTCACCATCAAGCCCCTG GACAGAAAACTCATTCTCGACAGCGCTCGTGCCACCAAGGGCAGGATCCTCACCGTGGAGGACCATTATTATGAAGGTGGCATTGGTGAG GCTGTGTCCAGTGCAGTAGTGGGCGAGCCTGGCATCACTGTCACCCACCTGGCAGTTAACCGGGTACCAAGAAGTGGGAAGCCGGCTGAG CTGCTGAAGATGTTTGGTATCGACAGGGATGCCATTGCACAAGCTGTGAGGGGCCTCATCACCAAGGCCTAGGGCGGCCAGTGCAGGTTC TGGGGAAGAAGCGTGGAGGGTGCGCTAGGGAGGCTGGTGTCCTTGGTCCTGGGCCAGGACCTGGGTGTCCCAAGTCCCCTTGGAATCACC TGCAACTGCCCTCAACCTCCAGAACTATCGCTGCCTCCCATTCATCACCAGGTGACATTTGACTGCAACCTGCCTTCTAGCTGAGAGGCT GAGACCTACATCCCTCATTGTGACCTCAGTCCACCTGGCCCTGAGCGGGCTGGGGAACTGCCTCAGTCTGGAAGCTGACCAGGCACTCTC AGGGCCGCCCCACCTCCCCCAAGTCCCCACAGCCTTGCAGTCAGGTCTCCTGGGATAGGGAGGTTCACTTGCTTGTTGTCCCTCGTCCTT GTCATATCCTTTTAACTAGGCATCTCAGAGAAGCAGAGACAGGGCAGCCTTCGTCCTGGGGGAAAAGGGACCCTCAGGATGGCATGAGAG GTCCTCAATCCCAAGTGTGGAACTGTCCCCCTCAACTTGTTAAAATGCAGATTTCTGGGTCTTGCCAATGGGGCCTGGGACTCCATGTGA CAACTGGCCCAGGAGCTTCTGATGTCACACAGAATTCTGCAGTCCCAAGCTCCAGCCCCGACCTGCTCTGCTGTTCCTAGGTGACTGCCC TCACACTGCTGACCACAGTGGATTTCTCCCCCTGCTGCTCGGGCTCAGCTGGGGTCAGCCCTGCTTATAAGGTCAACTGTGCAAAACCTT ATACTGGCCAAGAACAAACTAGTGCTGGGGGAGGAGGGCTGGGTGCCCCGGCCACTGGTGGAGTCCCCAGGAAATCCTCAGAGCTGTTGC >In-frame_PBRM1_ENST00000337303_chr3_52692215_-_TKT_ENST00000423525_chr3_53276258_-_3314nt TCCATGGGTTCCAAGAGAAGAAGAGCTACCTCCCCTTCCAGCAGTGTCAGCGGGGACTTTGATGATGGGCACCATTCTGTGTCAACACCA GGCCCAAGCAGGAAAAGGAGGAGACTTTCCAATCTTCCAACTGTAGATCCTATTGCCGTGTGCCATGAACTCTATAATACCATCCGAGAC TATAAGGATGAACAGGGCAGACTTCTCTGTGAGCTCTTCATTAGGGCACCAAAGCGAAGAAATCAACCAGACTATTATGAAGTGGTTTCT CAGCCCATTGACTTGATGAAAATCCAACAGAAACTAAAAATGGAAGAGTATGATGATGTTAATTTGCTGACTGCTGACTTCCAGCTTCTT TTTAACAATGCAAAGTCCTATTATAAGCCAGATTCTCCTGAATATAAAGCCGCTTGCAAACTCTGGGATTTGTACCTTCGAACAAGAAAT GAGTTTGTTCAGAAAGGAGAAGCAGATGACGAAGATGATGATGAAGATGGGCAAGACAATCAGGGCACAGTGACTGAAGGATCTTCTCCA GCTTACTTGAAGGAGATCCTGGAGCAGCTTCTTGAAGCCATAGTTGTAGCTACAAATCCATCAGGACGTCTCATTAGCGAACTTTTTCAG AAACTGCCTTCTAAAGTGCCACCCCACGTCATGCTGCAGCGCCGCAGAGATCATGGCTGTCCTCTTTTTCCACACCATGCGCTACAAGTC CCAGGACCCCCGGAATCCGCACAATGACCGCTTTGTGCTCTCCAAGGGCCATGCAGCTCCCATCCTCTACGCGGTCTGGGCTGAAGCTGG TTTCCTGGCCGAGGCGGAGCTGCTGAACCTGAGGAAGATCAGCTCCGACTTGGACGGGCACCCGGTCCCGAAACAAGCTTTCACCGACGT GGCCACTGGCTCCCTGGGCCAGGGCCTCGGGGCCGCTTGTGGGATGGCCTACACCGGCAAATACTTCGACAAGGCCAGCTACCGAGTCTA TTGCTTGCTGGGAGACGGGGAGCTGTCAGAGGGCTCTGTATGGGAGGCCATGGCCTTCGCCAGCATCTATAAGCTGGACAACCTTGTGGC CATTCTAGACATCAATCGCCTGGGCCAGAGTGACCCGGCCCCACTGCAGCACCAGATGGACATCTACCAGAAGCGGTGCGAGGCCTTCGG TTGGCATGCCATCATCGTGGATGGACACAGCGTGGAGGAGCTGTGCAAGGCCTTTGGCCAGGCCAAGCACCAGCCAACAGCCATCATTGC CAAGACCTTCAAGGGCCGAGGGATCACGGGGGTAGAAGATAAGGAGTCTTGGCATGGGAAGCCCCTCCCCAAAAACATGGCTGAGCAGAT CATCCAGGAGATCTACAGCCAGATCCAGAGCAAAAAGAAGATCCTGGCAACCCCTCCACAGGAGGACGCACCCTCAGTGGACATTGCCAA CATCCGCATGCCCAGCCTGCCCAGCTACAAAGTTGGGGACAAGATAGCCACCCGCAAGGCCTACGGGCAGGCACTGGCCAAGCTGGGCCA TGCCAGTGACCGCATCATCGCCCTGGATGGGGACACCAAAAATTCCACCTTCTCGGAGATCTTCAAAAAGGAGCACCCGGACCGCTTCAT CGAGTGCTACATTGCTGAGCAGAACATGGTGAGCATCGCGGTGGGCTGTGCCACCCGCAACAGGACGGTGCCCTTCTGCAGCACTTTTGC AGCCTTCTTCACGCGGGCCTTTGACCAGATTCGCATGGCCGCCATCTCCGAGAGCAACATCAACCTCTGCGGCTCCCACTGCGGCGTTTC CATCGGGGAAGACGGGCCCTCCCAGATGGCCCTAGAAGATCTGGCTATGTTTCGGTCAGTCCCCACATCAACTGTCTTTTACCCAAGTGA TGGCGTTGCTACAGAGAAGGCAGTGGAACTAGCCGCCAATACAAAGGGTATCTGCTTCATCCGGACCAGCCGCCCAGAAAATGCCATCAT CTATAACAACAATGAGGACTTCCAGGTCGGACAAGCCAAGGTGGTCCTGAAGAGCAAGGATGACCAGGTGACCGTTATCGGGGCTGGGGT GACCCTGCACGAGGCCTTGGCCGCTGCCGAACTGCTGAAGAAAGAAAAGATCAACATCCGCGTGCTGGACCCCTTCACCATCAAGCCCCT GGACAGAAAACTCATTCTCGACAGCGCTCGTGCCACCAAGGGCAGGATCCTCACCGTGGAGGACCATTATTATGAAGGTGGCATTGGTGA GGCTGTGTCCAGTGCAGTAGTGGGCGAGCCTGGCATCACTGTCACCCACCTGGCAGTTAACCGGGTACCAAGAAGTGGGAAGCCGGCTGA GCTGCTGAAGATGTTTGGTATCGACAGGGATGCCATTGCACAAGCTGTGAGGGGCCTCATCACCAAGGCCTAGGGCGGCCAGTGCAGGTT CTGGGGAAGAAGCGTGGAGGGTGCGCTAGGGAGGCTGGTGTCCTTGGTCCTGGGCCAGGACCTGGGTGTCCCAAGTCCCCTTGGAATCAC CTGCAACTGCCCTCAACCTCCAGAACTATCGCTGCCTCCCATTCATCACCAGGTGACATTTGACTGCAACCTGCCTTCTAGCTGAGAGGC TGAGACCTACATCCCTCATTGTGACCTCAGTCCACCTGGCCCTGAGCGGGCTGGGGAACTGCCTCAGTCTGGAAGCTGACCAGGCACTCT CAGGGCCGCCCCACCTCCCCCAAGTCCCCACAGCCTTGCAGTCAGGTCTCCTGGGATAGGGAGGTTCACTTGCTTGTTGTCCCTCGTCCT TGTCATATCCTTTTAACTAGGCATCTCAGAGAAGCAGAGACAGGGCAGCCTTCGTCCTGGGGGAAAAGGGACCCTCAGGATGGCATGAGA GGTCCTCAATCCCAAGTGTGGAACTGTCCCCCTCAACTTGTTAAAATGCAGATTTCTGGGTCTTGCCAATGGGGCCTGGGACTCCATGTG ACAACTGGCCCAGGAGCTTCTGATGTCACACAGAATTCTGCAGTCCCAAGCTCCAGCCCCGACCTGCTCTGCTGTTCCTAGGTGACTGCC CTCACACTGCTGACCACAGTGGATTTCTCCCCCTGCTGCTCGGGCTCAGCTGGGGTCAGCCCTGCTTATAAGGTCAACTGTGCAAAACCT TATACTGGCCAAGAACAAACTAGTGCTGGGGGAGGAGGGCTGGGTGCCCCGGCCACTGGTGGAGTCCCCAGGAAATCCTCAGAGCTGTTG >In-frame_PBRM1_ENST00000410007_chr3_52692215_-_TKT_ENST00000423525_chr3_53276258_-_3314nt TCCATGGGTTCCAAGAGAAGAAGAGCTACCTCCCCTTCCAGCAGTGTCAGCGGGGACTTTGATGATGGGCACCATTCTGTGTCAACACCA GGCCCAAGCAGGAAAAGGAGGAGACTTTCCAATCTTCCAACTGTAGATCCTATTGCCGTGTGCCATGAACTCTATAATACCATCCGAGAC TATAAGGATGAACAGGGCAGACTTCTCTGTGAGCTCTTCATTAGGGCACCAAAGCGAAGAAATCAACCAGACTATTATGAAGTGGTTTCT CAGCCCATTGACTTGATGAAAATCCAACAGAAACTAAAAATGGAAGAGTATGATGATGTTAATTTGCTGACTGCTGACTTCCAGCTTCTT TTTAACAATGCAAAGTCCTATTATAAGCCAGATTCTCCTGAATATAAAGCCGCTTGCAAACTCTGGGATTTGTACCTTCGAACAAGAAAT GAGTTTGTTCAGAAAGGAGAAGCAGATGACGAAGATGATGATGAAGATGGGCAAGACAATCAGGGCACAGTGACTGAAGGATCTTCTCCA GCTTACTTGAAGGAGATCCTGGAGCAGCTTCTTGAAGCCATAGTTGTAGCTACAAATCCATCAGGACGTCTCATTAGCGAACTTTTTCAG AAACTGCCTTCTAAAGTGCCACCCCACGTCATGCTGCAGCGCCGCAGAGATCATGGCTGTCCTCTTTTTCCACACCATGCGCTACAAGTC CCAGGACCCCCGGAATCCGCACAATGACCGCTTTGTGCTCTCCAAGGGCCATGCAGCTCCCATCCTCTACGCGGTCTGGGCTGAAGCTGG TTTCCTGGCCGAGGCGGAGCTGCTGAACCTGAGGAAGATCAGCTCCGACTTGGACGGGCACCCGGTCCCGAAACAAGCTTTCACCGACGT GGCCACTGGCTCCCTGGGCCAGGGCCTCGGGGCCGCTTGTGGGATGGCCTACACCGGCAAATACTTCGACAAGGCCAGCTACCGAGTCTA TTGCTTGCTGGGAGACGGGGAGCTGTCAGAGGGCTCTGTATGGGAGGCCATGGCCTTCGCCAGCATCTATAAGCTGGACAACCTTGTGGC CATTCTAGACATCAATCGCCTGGGCCAGAGTGACCCGGCCCCACTGCAGCACCAGATGGACATCTACCAGAAGCGGTGCGAGGCCTTCGG TTGGCATGCCATCATCGTGGATGGACACAGCGTGGAGGAGCTGTGCAAGGCCTTTGGCCAGGCCAAGCACCAGCCAACAGCCATCATTGC CAAGACCTTCAAGGGCCGAGGGATCACGGGGGTAGAAGATAAGGAGTCTTGGCATGGGAAGCCCCTCCCCAAAAACATGGCTGAGCAGAT CATCCAGGAGATCTACAGCCAGATCCAGAGCAAAAAGAAGATCCTGGCAACCCCTCCACAGGAGGACGCACCCTCAGTGGACATTGCCAA CATCCGCATGCCCAGCCTGCCCAGCTACAAAGTTGGGGACAAGATAGCCACCCGCAAGGCCTACGGGCAGGCACTGGCCAAGCTGGGCCA TGCCAGTGACCGCATCATCGCCCTGGATGGGGACACCAAAAATTCCACCTTCTCGGAGATCTTCAAAAAGGAGCACCCGGACCGCTTCAT CGAGTGCTACATTGCTGAGCAGAACATGGTGAGCATCGCGGTGGGCTGTGCCACCCGCAACAGGACGGTGCCCTTCTGCAGCACTTTTGC AGCCTTCTTCACGCGGGCCTTTGACCAGATTCGCATGGCCGCCATCTCCGAGAGCAACATCAACCTCTGCGGCTCCCACTGCGGCGTTTC CATCGGGGAAGACGGGCCCTCCCAGATGGCCCTAGAAGATCTGGCTATGTTTCGGTCAGTCCCCACATCAACTGTCTTTTACCCAAGTGA TGGCGTTGCTACAGAGAAGGCAGTGGAACTAGCCGCCAATACAAAGGGTATCTGCTTCATCCGGACCAGCCGCCCAGAAAATGCCATCAT CTATAACAACAATGAGGACTTCCAGGTCGGACAAGCCAAGGTGGTCCTGAAGAGCAAGGATGACCAGGTGACCGTTATCGGGGCTGGGGT GACCCTGCACGAGGCCTTGGCCGCTGCCGAACTGCTGAAGAAAGAAAAGATCAACATCCGCGTGCTGGACCCCTTCACCATCAAGCCCCT GGACAGAAAACTCATTCTCGACAGCGCTCGTGCCACCAAGGGCAGGATCCTCACCGTGGAGGACCATTATTATGAAGGTGGCATTGGTGA GGCTGTGTCCAGTGCAGTAGTGGGCGAGCCTGGCATCACTGTCACCCACCTGGCAGTTAACCGGGTACCAAGAAGTGGGAAGCCGGCTGA GCTGCTGAAGATGTTTGGTATCGACAGGGATGCCATTGCACAAGCTGTGAGGGGCCTCATCACCAAGGCCTAGGGCGGCCAGTGCAGGTT CTGGGGAAGAAGCGTGGAGGGTGCGCTAGGGAGGCTGGTGTCCTTGGTCCTGGGCCAGGACCTGGGTGTCCCAAGTCCCCTTGGAATCAC CTGCAACTGCCCTCAACCTCCAGAACTATCGCTGCCTCCCATTCATCACCAGGTGACATTTGACTGCAACCTGCCTTCTAGCTGAGAGGC TGAGACCTACATCCCTCATTGTGACCTCAGTCCACCTGGCCCTGAGCGGGCTGGGGAACTGCCTCAGTCTGGAAGCTGACCAGGCACTCT CAGGGCCGCCCCACCTCCCCCAAGTCCCCACAGCCTTGCAGTCAGGTCTCCTGGGATAGGGAGGTTCACTTGCTTGTTGTCCCTCGTCCT TGTCATATCCTTTTAACTAGGCATCTCAGAGAAGCAGAGACAGGGCAGCCTTCGTCCTGGGGGAAAAGGGACCCTCAGGATGGCATGAGA GGTCCTCAATCCCAAGTGTGGAACTGTCCCCCTCAACTTGTTAAAATGCAGATTTCTGGGTCTTGCCAATGGGGCCTGGGACTCCATGTG ACAACTGGCCCAGGAGCTTCTGATGTCACACAGAATTCTGCAGTCCCAAGCTCCAGCCCCGACCTGCTCTGCTGTTCCTAGGTGACTGCC CTCACACTGCTGACCACAGTGGATTTCTCCCCCTGCTGCTCGGGCTCAGCTGGGGTCAGCCCTGCTTATAAGGTCAACTGTGCAAAACCT TATACTGGCCAAGAACAAACTAGTGCTGGGGGAGGAGGGCTGGGTGCCCCGGCCACTGGTGGAGTCCCCAGGAAATCCTCAGAGCTGTTG >In-frame_PBRM1_ENST00000409057_chr3_52692215_-_TKT_ENST00000423525_chr3_53276258_-_3314nt TCCATGGGTTCCAAGAGAAGAAGAGCTACCTCCCCTTCCAGCAGTGTCAGCGGGGACTTTGATGATGGGCACCATTCTGTGTCAACACCA GGCCCAAGCAGGAAAAGGAGGAGACTTTCCAATCTTCCAACTGTAGATCCTATTGCCGTGTGCCATGAACTCTATAATACCATCCGAGAC TATAAGGATGAACAGGGCAGACTTCTCTGTGAGCTCTTCATTAGGGCACCAAAGCGAAGAAATCAACCAGACTATTATGAAGTGGTTTCT CAGCCCATTGACTTGATGAAAATCCAACAGAAACTAAAAATGGAAGAGTATGATGATGTTAATTTGCTGACTGCTGACTTCCAGCTTCTT TTTAACAATGCAAAGTCCTATTATAAGCCAGATTCTCCTGAATATAAAGCCGCTTGCAAACTCTGGGATTTGTACCTTCGAACAAGAAAT GAGTTTGTTCAGAAAGGAGAAGCAGATGACGAAGATGATGATGAAGATGGGCAAGACAATCAGGGCACAGTGACTGAAGGATCTTCTCCA GCTTACTTGAAGGAGATCCTGGAGCAGCTTCTTGAAGCCATAGTTGTAGCTACAAATCCATCAGGACGTCTCATTAGCGAACTTTTTCAG AAACTGCCTTCTAAAGTGCCACCCCACGTCATGCTGCAGCGCCGCAGAGATCATGGCTGTCCTCTTTTTCCACACCATGCGCTACAAGTC CCAGGACCCCCGGAATCCGCACAATGACCGCTTTGTGCTCTCCAAGGGCCATGCAGCTCCCATCCTCTACGCGGTCTGGGCTGAAGCTGG TTTCCTGGCCGAGGCGGAGCTGCTGAACCTGAGGAAGATCAGCTCCGACTTGGACGGGCACCCGGTCCCGAAACAAGCTTTCACCGACGT GGCCACTGGCTCCCTGGGCCAGGGCCTCGGGGCCGCTTGTGGGATGGCCTACACCGGCAAATACTTCGACAAGGCCAGCTACCGAGTCTA TTGCTTGCTGGGAGACGGGGAGCTGTCAGAGGGCTCTGTATGGGAGGCCATGGCCTTCGCCAGCATCTATAAGCTGGACAACCTTGTGGC CATTCTAGACATCAATCGCCTGGGCCAGAGTGACCCGGCCCCACTGCAGCACCAGATGGACATCTACCAGAAGCGGTGCGAGGCCTTCGG TTGGCATGCCATCATCGTGGATGGACACAGCGTGGAGGAGCTGTGCAAGGCCTTTGGCCAGGCCAAGCACCAGCCAACAGCCATCATTGC CAAGACCTTCAAGGGCCGAGGGATCACGGGGGTAGAAGATAAGGAGTCTTGGCATGGGAAGCCCCTCCCCAAAAACATGGCTGAGCAGAT CATCCAGGAGATCTACAGCCAGATCCAGAGCAAAAAGAAGATCCTGGCAACCCCTCCACAGGAGGACGCACCCTCAGTGGACATTGCCAA CATCCGCATGCCCAGCCTGCCCAGCTACAAAGTTGGGGACAAGATAGCCACCCGCAAGGCCTACGGGCAGGCACTGGCCAAGCTGGGCCA TGCCAGTGACCGCATCATCGCCCTGGATGGGGACACCAAAAATTCCACCTTCTCGGAGATCTTCAAAAAGGAGCACCCGGACCGCTTCAT CGAGTGCTACATTGCTGAGCAGAACATGGTGAGCATCGCGGTGGGCTGTGCCACCCGCAACAGGACGGTGCCCTTCTGCAGCACTTTTGC AGCCTTCTTCACGCGGGCCTTTGACCAGATTCGCATGGCCGCCATCTCCGAGAGCAACATCAACCTCTGCGGCTCCCACTGCGGCGTTTC CATCGGGGAAGACGGGCCCTCCCAGATGGCCCTAGAAGATCTGGCTATGTTTCGGTCAGTCCCCACATCAACTGTCTTTTACCCAAGTGA TGGCGTTGCTACAGAGAAGGCAGTGGAACTAGCCGCCAATACAAAGGGTATCTGCTTCATCCGGACCAGCCGCCCAGAAAATGCCATCAT CTATAACAACAATGAGGACTTCCAGGTCGGACAAGCCAAGGTGGTCCTGAAGAGCAAGGATGACCAGGTGACCGTTATCGGGGCTGGGGT GACCCTGCACGAGGCCTTGGCCGCTGCCGAACTGCTGAAGAAAGAAAAGATCAACATCCGCGTGCTGGACCCCTTCACCATCAAGCCCCT GGACAGAAAACTCATTCTCGACAGCGCTCGTGCCACCAAGGGCAGGATCCTCACCGTGGAGGACCATTATTATGAAGGTGGCATTGGTGA GGCTGTGTCCAGTGCAGTAGTGGGCGAGCCTGGCATCACTGTCACCCACCTGGCAGTTAACCGGGTACCAAGAAGTGGGAAGCCGGCTGA GCTGCTGAAGATGTTTGGTATCGACAGGGATGCCATTGCACAAGCTGTGAGGGGCCTCATCACCAAGGCCTAGGGCGGCCAGTGCAGGTT CTGGGGAAGAAGCGTGGAGGGTGCGCTAGGGAGGCTGGTGTCCTTGGTCCTGGGCCAGGACCTGGGTGTCCCAAGTCCCCTTGGAATCAC CTGCAACTGCCCTCAACCTCCAGAACTATCGCTGCCTCCCATTCATCACCAGGTGACATTTGACTGCAACCTGCCTTCTAGCTGAGAGGC TGAGACCTACATCCCTCATTGTGACCTCAGTCCACCTGGCCCTGAGCGGGCTGGGGAACTGCCTCAGTCTGGAAGCTGACCAGGCACTCT CAGGGCCGCCCCACCTCCCCCAAGTCCCCACAGCCTTGCAGTCAGGTCTCCTGGGATAGGGAGGTTCACTTGCTTGTTGTCCCTCGTCCT TGTCATATCCTTTTAACTAGGCATCTCAGAGAAGCAGAGACAGGGCAGCCTTCGTCCTGGGGGAAAAGGGACCCTCAGGATGGCATGAGA GGTCCTCAATCCCAAGTGTGGAACTGTCCCCCTCAACTTGTTAAAATGCAGATTTCTGGGTCTTGCCAATGGGGCCTGGGACTCCATGTG ACAACTGGCCCAGGAGCTTCTGATGTCACACAGAATTCTGCAGTCCCAAGCTCCAGCCCCGACCTGCTCTGCTGTTCCTAGGTGACTGCC CTCACACTGCTGACCACAGTGGATTTCTCCCCCTGCTGCTCGGGCTCAGCTGGGGTCAGCCCTGCTTATAAGGTCAACTGTGCAAAACCT TATACTGGCCAAGAACAAACTAGTGCTGGGGGAGGAGGGCTGGGTGCCCCGGCCACTGGTGGAGTCCCCAGGAAATCCTCAGAGCTGTTG >In-frame_PBRM1_ENST00000409114_chr3_52692215_-_TKT_ENST00000423525_chr3_53276258_-_3314nt TCCATGGGTTCCAAGAGAAGAAGAGCTACCTCCCCTTCCAGCAGTGTCAGCGGGGACTTTGATGATGGGCACCATTCTGTGTCAACACCA GGCCCAAGCAGGAAAAGGAGGAGACTTTCCAATCTTCCAACTGTAGATCCTATTGCCGTGTGCCATGAACTCTATAATACCATCCGAGAC TATAAGGATGAACAGGGCAGACTTCTCTGTGAGCTCTTCATTAGGGCACCAAAGCGAAGAAATCAACCAGACTATTATGAAGTGGTTTCT CAGCCCATTGACTTGATGAAAATCCAACAGAAACTAAAAATGGAAGAGTATGATGATGTTAATTTGCTGACTGCTGACTTCCAGCTTCTT TTTAACAATGCAAAGTCCTATTATAAGCCAGATTCTCCTGAATATAAAGCCGCTTGCAAACTCTGGGATTTGTACCTTCGAACAAGAAAT GAGTTTGTTCAGAAAGGAGAAGCAGATGACGAAGATGATGATGAAGATGGGCAAGACAATCAGGGCACAGTGACTGAAGGATCTTCTCCA GCTTACTTGAAGGAGATCCTGGAGCAGCTTCTTGAAGCCATAGTTGTAGCTACAAATCCATCAGGACGTCTCATTAGCGAACTTTTTCAG AAACTGCCTTCTAAAGTGCCACCCCACGTCATGCTGCAGCGCCGCAGAGATCATGGCTGTCCTCTTTTTCCACACCATGCGCTACAAGTC CCAGGACCCCCGGAATCCGCACAATGACCGCTTTGTGCTCTCCAAGGGCCATGCAGCTCCCATCCTCTACGCGGTCTGGGCTGAAGCTGG TTTCCTGGCCGAGGCGGAGCTGCTGAACCTGAGGAAGATCAGCTCCGACTTGGACGGGCACCCGGTCCCGAAACAAGCTTTCACCGACGT GGCCACTGGCTCCCTGGGCCAGGGCCTCGGGGCCGCTTGTGGGATGGCCTACACCGGCAAATACTTCGACAAGGCCAGCTACCGAGTCTA TTGCTTGCTGGGAGACGGGGAGCTGTCAGAGGGCTCTGTATGGGAGGCCATGGCCTTCGCCAGCATCTATAAGCTGGACAACCTTGTGGC CATTCTAGACATCAATCGCCTGGGCCAGAGTGACCCGGCCCCACTGCAGCACCAGATGGACATCTACCAGAAGCGGTGCGAGGCCTTCGG TTGGCATGCCATCATCGTGGATGGACACAGCGTGGAGGAGCTGTGCAAGGCCTTTGGCCAGGCCAAGCACCAGCCAACAGCCATCATTGC CAAGACCTTCAAGGGCCGAGGGATCACGGGGGTAGAAGATAAGGAGTCTTGGCATGGGAAGCCCCTCCCCAAAAACATGGCTGAGCAGAT CATCCAGGAGATCTACAGCCAGATCCAGAGCAAAAAGAAGATCCTGGCAACCCCTCCACAGGAGGACGCACCCTCAGTGGACATTGCCAA CATCCGCATGCCCAGCCTGCCCAGCTACAAAGTTGGGGACAAGATAGCCACCCGCAAGGCCTACGGGCAGGCACTGGCCAAGCTGGGCCA TGCCAGTGACCGCATCATCGCCCTGGATGGGGACACCAAAAATTCCACCTTCTCGGAGATCTTCAAAAAGGAGCACCCGGACCGCTTCAT CGAGTGCTACATTGCTGAGCAGAACATGGTGAGCATCGCGGTGGGCTGTGCCACCCGCAACAGGACGGTGCCCTTCTGCAGCACTTTTGC AGCCTTCTTCACGCGGGCCTTTGACCAGATTCGCATGGCCGCCATCTCCGAGAGCAACATCAACCTCTGCGGCTCCCACTGCGGCGTTTC CATCGGGGAAGACGGGCCCTCCCAGATGGCCCTAGAAGATCTGGCTATGTTTCGGTCAGTCCCCACATCAACTGTCTTTTACCCAAGTGA TGGCGTTGCTACAGAGAAGGCAGTGGAACTAGCCGCCAATACAAAGGGTATCTGCTTCATCCGGACCAGCCGCCCAGAAAATGCCATCAT CTATAACAACAATGAGGACTTCCAGGTCGGACAAGCCAAGGTGGTCCTGAAGAGCAAGGATGACCAGGTGACCGTTATCGGGGCTGGGGT GACCCTGCACGAGGCCTTGGCCGCTGCCGAACTGCTGAAGAAAGAAAAGATCAACATCCGCGTGCTGGACCCCTTCACCATCAAGCCCCT GGACAGAAAACTCATTCTCGACAGCGCTCGTGCCACCAAGGGCAGGATCCTCACCGTGGAGGACCATTATTATGAAGGTGGCATTGGTGA GGCTGTGTCCAGTGCAGTAGTGGGCGAGCCTGGCATCACTGTCACCCACCTGGCAGTTAACCGGGTACCAAGAAGTGGGAAGCCGGCTGA GCTGCTGAAGATGTTTGGTATCGACAGGGATGCCATTGCACAAGCTGTGAGGGGCCTCATCACCAAGGCCTAGGGCGGCCAGTGCAGGTT CTGGGGAAGAAGCGTGGAGGGTGCGCTAGGGAGGCTGGTGTCCTTGGTCCTGGGCCAGGACCTGGGTGTCCCAAGTCCCCTTGGAATCAC CTGCAACTGCCCTCAACCTCCAGAACTATCGCTGCCTCCCATTCATCACCAGGTGACATTTGACTGCAACCTGCCTTCTAGCTGAGAGGC TGAGACCTACATCCCTCATTGTGACCTCAGTCCACCTGGCCCTGAGCGGGCTGGGGAACTGCCTCAGTCTGGAAGCTGACCAGGCACTCT CAGGGCCGCCCCACCTCCCCCAAGTCCCCACAGCCTTGCAGTCAGGTCTCCTGGGATAGGGAGGTTCACTTGCTTGTTGTCCCTCGTCCT TGTCATATCCTTTTAACTAGGCATCTCAGAGAAGCAGAGACAGGGCAGCCTTCGTCCTGGGGGAAAAGGGACCCTCAGGATGGCATGAGA GGTCCTCAATCCCAAGTGTGGAACTGTCCCCCTCAACTTGTTAAAATGCAGATTTCTGGGTCTTGCCAATGGGGCCTGGGACTCCATGTG ACAACTGGCCCAGGAGCTTCTGATGTCACACAGAATTCTGCAGTCCCAAGCTCCAGCCCCGACCTGCTCTGCTGTTCCTAGGTGACTGCC CTCACACTGCTGACCACAGTGGATTTCTCCCCCTGCTGCTCGGGCTCAGCTGGGGTCAGCCCTGCTTATAAGGTCAACTGTGCAAAACCT TATACTGGCCAAGAACAAACTAGTGCTGGGGGAGGAGGGCTGGGTGCCCCGGCCACTGGTGGAGTCCCCAGGAAATCCTCAGAGCTGTTG >In-frame_PBRM1_ENST00000409767_chr3_52692215_-_TKT_ENST00000423525_chr3_53276258_-_3314nt TCCATGGGTTCCAAGAGAAGAAGAGCTACCTCCCCTTCCAGCAGTGTCAGCGGGGACTTTGATGATGGGCACCATTCTGTGTCAACACCA GGCCCAAGCAGGAAAAGGAGGAGACTTTCCAATCTTCCAACTGTAGATCCTATTGCCGTGTGCCATGAACTCTATAATACCATCCGAGAC TATAAGGATGAACAGGGCAGACTTCTCTGTGAGCTCTTCATTAGGGCACCAAAGCGAAGAAATCAACCAGACTATTATGAAGTGGTTTCT CAGCCCATTGACTTGATGAAAATCCAACAGAAACTAAAAATGGAAGAGTATGATGATGTTAATTTGCTGACTGCTGACTTCCAGCTTCTT TTTAACAATGCAAAGTCCTATTATAAGCCAGATTCTCCTGAATATAAAGCCGCTTGCAAACTCTGGGATTTGTACCTTCGAACAAGAAAT GAGTTTGTTCAGAAAGGAGAAGCAGATGACGAAGATGATGATGAAGATGGGCAAGACAATCAGGGCACAGTGACTGAAGGATCTTCTCCA GCTTACTTGAAGGAGATCCTGGAGCAGCTTCTTGAAGCCATAGTTGTAGCTACAAATCCATCAGGACGTCTCATTAGCGAACTTTTTCAG AAACTGCCTTCTAAAGTGCCACCCCACGTCATGCTGCAGCGCCGCAGAGATCATGGCTGTCCTCTTTTTCCACACCATGCGCTACAAGTC CCAGGACCCCCGGAATCCGCACAATGACCGCTTTGTGCTCTCCAAGGGCCATGCAGCTCCCATCCTCTACGCGGTCTGGGCTGAAGCTGG TTTCCTGGCCGAGGCGGAGCTGCTGAACCTGAGGAAGATCAGCTCCGACTTGGACGGGCACCCGGTCCCGAAACAAGCTTTCACCGACGT GGCCACTGGCTCCCTGGGCCAGGGCCTCGGGGCCGCTTGTGGGATGGCCTACACCGGCAAATACTTCGACAAGGCCAGCTACCGAGTCTA TTGCTTGCTGGGAGACGGGGAGCTGTCAGAGGGCTCTGTATGGGAGGCCATGGCCTTCGCCAGCATCTATAAGCTGGACAACCTTGTGGC CATTCTAGACATCAATCGCCTGGGCCAGAGTGACCCGGCCCCACTGCAGCACCAGATGGACATCTACCAGAAGCGGTGCGAGGCCTTCGG TTGGCATGCCATCATCGTGGATGGACACAGCGTGGAGGAGCTGTGCAAGGCCTTTGGCCAGGCCAAGCACCAGCCAACAGCCATCATTGC CAAGACCTTCAAGGGCCGAGGGATCACGGGGGTAGAAGATAAGGAGTCTTGGCATGGGAAGCCCCTCCCCAAAAACATGGCTGAGCAGAT CATCCAGGAGATCTACAGCCAGATCCAGAGCAAAAAGAAGATCCTGGCAACCCCTCCACAGGAGGACGCACCCTCAGTGGACATTGCCAA CATCCGCATGCCCAGCCTGCCCAGCTACAAAGTTGGGGACAAGATAGCCACCCGCAAGGCCTACGGGCAGGCACTGGCCAAGCTGGGCCA TGCCAGTGACCGCATCATCGCCCTGGATGGGGACACCAAAAATTCCACCTTCTCGGAGATCTTCAAAAAGGAGCACCCGGACCGCTTCAT CGAGTGCTACATTGCTGAGCAGAACATGGTGAGCATCGCGGTGGGCTGTGCCACCCGCAACAGGACGGTGCCCTTCTGCAGCACTTTTGC AGCCTTCTTCACGCGGGCCTTTGACCAGATTCGCATGGCCGCCATCTCCGAGAGCAACATCAACCTCTGCGGCTCCCACTGCGGCGTTTC CATCGGGGAAGACGGGCCCTCCCAGATGGCCCTAGAAGATCTGGCTATGTTTCGGTCAGTCCCCACATCAACTGTCTTTTACCCAAGTGA TGGCGTTGCTACAGAGAAGGCAGTGGAACTAGCCGCCAATACAAAGGGTATCTGCTTCATCCGGACCAGCCGCCCAGAAAATGCCATCAT CTATAACAACAATGAGGACTTCCAGGTCGGACAAGCCAAGGTGGTCCTGAAGAGCAAGGATGACCAGGTGACCGTTATCGGGGCTGGGGT GACCCTGCACGAGGCCTTGGCCGCTGCCGAACTGCTGAAGAAAGAAAAGATCAACATCCGCGTGCTGGACCCCTTCACCATCAAGCCCCT GGACAGAAAACTCATTCTCGACAGCGCTCGTGCCACCAAGGGCAGGATCCTCACCGTGGAGGACCATTATTATGAAGGTGGCATTGGTGA GGCTGTGTCCAGTGCAGTAGTGGGCGAGCCTGGCATCACTGTCACCCACCTGGCAGTTAACCGGGTACCAAGAAGTGGGAAGCCGGCTGA GCTGCTGAAGATGTTTGGTATCGACAGGGATGCCATTGCACAAGCTGTGAGGGGCCTCATCACCAAGGCCTAGGGCGGCCAGTGCAGGTT CTGGGGAAGAAGCGTGGAGGGTGCGCTAGGGAGGCTGGTGTCCTTGGTCCTGGGCCAGGACCTGGGTGTCCCAAGTCCCCTTGGAATCAC CTGCAACTGCCCTCAACCTCCAGAACTATCGCTGCCTCCCATTCATCACCAGGTGACATTTGACTGCAACCTGCCTTCTAGCTGAGAGGC TGAGACCTACATCCCTCATTGTGACCTCAGTCCACCTGGCCCTGAGCGGGCTGGGGAACTGCCTCAGTCTGGAAGCTGACCAGGCACTCT CAGGGCCGCCCCACCTCCCCCAAGTCCCCACAGCCTTGCAGTCAGGTCTCCTGGGATAGGGAGGTTCACTTGCTTGTTGTCCCTCGTCCT TGTCATATCCTTTTAACTAGGCATCTCAGAGAAGCAGAGACAGGGCAGCCTTCGTCCTGGGGGAAAAGGGACCCTCAGGATGGCATGAGA GGTCCTCAATCCCAAGTGTGGAACTGTCCCCCTCAACTTGTTAAAATGCAGATTTCTGGGTCTTGCCAATGGGGCCTGGGACTCCATGTG ACAACTGGCCCAGGAGCTTCTGATGTCACACAGAATTCTGCAGTCCCAAGCTCCAGCCCCGACCTGCTCTGCTGTTCCTAGGTGACTGCC CTCACACTGCTGACCACAGTGGATTTCTCCCCCTGCTGCTCGGGCTCAGCTGGGGTCAGCCCTGCTTATAAGGTCAACTGTGCAAAACCT TATACTGGCCAAGAACAAACTAGTGCTGGGGGAGGAGGGCTGGGTGCCCCGGCCACTGGTGGAGTCCCCAGGAAATCCTCAGAGCTGTTG |
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FusionGenePPI for PBRM1_TKT |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
PBRM1 | ARID1A, SMARCC2, SMARCC1, SMARCE1, HIST1H3A, HIST1H4A, HIST2H2BE, HIST2H2AC, CHD7, ARID2, SMARCD1, ACTL6A, SMARCB1, SMARCA4, SMARCAD1, HIST3H3, SIRT7, CALML5, APP, GTF3C5, TCHHL1, NOTCH1, MAML1, ZNF512B, HECW2, CDC20, ZDHHC17, OBSL1, EED, DPF3, NUP50, COPS3, BRD7, SCARNA22, IFI16, HIST1H3E, DPPA4, NANOG, POU5F1, TOP1, HDAC6, VHL, BCL7C, BCL7A, ZBTB48, UHRF2, BRD1 | TKT | TKT, ATG5, PIK3C2A, H2AFX, HDAC5, ISG15, TERF1, CUL3, CDK2, MYOC, TPI1, TALDO1, AHCYL1, IGBP1, UBE2I, UFC1, PKM, VDAC3, UGDH, UFM1, SSSCA1, PRDX1, UBE2D1, DYNC1LI1, MYC, FN1, SQSTM1, FBXO6, FUS, MAPK8, ACAA2, ACP1, AKR1A1, AKR1B1, AKR1B15, LOC101930400, AKR1C2, ALDH4A1, ALDOA, CALR, COX17, DUT, ENO1, ENO2, ENO3, ESD, FABP5, FABP7, FH, GAPDH, GLRX, GPI, GPX4, HINT1, HSPA4L, HSPE1, IDH1, ITPA, LDHA, LDHAL6B, LDHB, LYPLA2, MIF, NANS, NEDD8, NME1-NME2, NME2, P4HB, PCBP1, PCMT1, PDCD6, PDCD6IP, PGK1, PGM2, PITPNB, PLS3, PMP2, RAB10, RPE, SCYL2, SF1, SOD2, STAT4, STIP1, ABHD14B, AK2, ANXA7, ASS1, C11orf54, CALU, CAPG, CFL1, COTL1, DAZAP1, EZR, FKBP7, FSCN1, GLO1, GLOD4, HSD17B10, HSPA9, HSPB1, LAP3, MSN, PAICS, PIR, PTGES3, RDX, RPIA, RSU1, SLC2A9, SOD1, SPR, SRI, TAGLN2, TAGLN3, C12orf5, VAPA, WDR1, YKT6, VCP, XRCC6, NTRK1, IFI16, PPME1, EXOSC9, PRKCD, MCM2, BCOR, U2AF2, SERPINB5, KHNYN, GREB1, SMG8, DMWD, ATG2B, FIGNL1, POLA2, WDR54, C5orf34, WDR19, MOCOS, POTEF, WDR41, STIL, GOLGA4, MED20, EIF2AK4, TBL1X, CAMK2B, TRIM32, KDM5C, SPC25, MED17, LCMT2, TUBA4A, PLEC, DPP9, EML4, HTT, TRAPPC8, AASDH, TBC1D4, COQ2, DNM1L, SDHA, SOAT1, VDAC1, BRCA1, TES |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for PBRM1_TKT |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for PBRM1_TKT |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | PBRM1 | C0005586 | Bipolar Disorder | 3 | PSYGENET |
Hgene | PBRM1 | C0007134 | Renal Cell Carcinoma | 2 | CTD_human |
Hgene | PBRM1 | C0033975 | Psychotic Disorders | 1 | PSYGENET |
Hgene | PBRM1 | C0036341 | Schizophrenia | 1 | PSYGENET |
Hgene | PBRM1 | C0040100 | Thymoma | 1 | CTD_human |
Hgene | PBRM1 | C0206698 | Cholangiocarcinoma | 1 | CTD_human |
Hgene | PBRM1 | C0349204 | Nonorganic psychosis | 1 | PSYGENET |
Tgene | TKT | C0001973 | Alcoholic Intoxication, Chronic | 2 | PSYGENET |
Tgene | TKT | C0024667 | Animal Mammary Neoplasms | 1 | CTD_human |
Tgene | TKT | C0024668 | Mammary Neoplasms, Experimental | 1 | CTD_human |
Tgene | TKT | C0027626 | Neoplasm Invasiveness | 1 | CTD_human |
Tgene | TKT | C0043121 | Wernicke Encephalopathy | 1 | CTD_human |
Tgene | TKT | C0242184 | Hypoxia | 1 | CTD_human |