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Fusion gene ID: 26095 |
FusionGeneSummary for PAXBP1_TP53I3 |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: PAXBP1_TP53I3 | Fusion gene ID: 26095 | Hgene | Tgene | Gene symbol | PAXBP1 | TP53I3 | Gene ID | 94104 | 9540 |
| Gene name | PAX3 and PAX7 binding protein 1 | tumor protein p53 inducible protein 3 | |
| Synonyms | BM020|C21orf66|FSAP105|GCFC|GCFC1 | PIG3 | |
| Cytomap | 21q22.11 | 2p23.3 | |
| Type of gene | protein-coding | protein-coding | |
| Description | PAX3- and PAX7-binding protein 1GC-rich sequence DNA-binding factor 1GC-rich sequence DNA-binding factor candidatefunctional spliceosome-associated protein 105 | quinone oxidoreductase PIG3p53-induced gene 3 proteinquinone oxidoreductase homolog | |
| Modification date | 20180523 | 20180519 | |
| UniProtAcc | Q9Y5B6 | Q53FA7 | |
| Ensembl transtripts involved in fusion gene | ENST00000331923, ENST00000290178, ENST00000472588, | ENST00000335934, ENST00000238721, ENST00000313482, ENST00000407482, ENST00000417886, | |
| Fusion gene scores | * DoF score | 2 X 2 X 2=8 | 3 X 2 X 2=12 |
| # samples | 2 | 3 | |
| ** MAII score | log2(2/8*10)=1.32192809488736 | log2(3/12*10)=1.32192809488736 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
| Context | PubMed: PAXBP1 [Title/Abstract] AND TP53I3 [Title/Abstract] AND fusion [Title/Abstract] | ||
| Functional or gene categories assigned by FusionGDB annotation | |||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Tgene | TP53I3 | GO:0006739 | NADP metabolic process | 19349281 |
| Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| TCGA | LD | BRCA | TCGA-AR-A1AO-01A | PAXBP1 | chr21 | 34131391 | - | TP53I3 | chr2 | 24300631 | - |
| * LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
| Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| Frame-shift | ENST00000331923 | ENST00000335934 | PAXBP1 | chr21 | 34131391 | - | TP53I3 | chr2 | 24300631 | - |
| Frame-shift | ENST00000331923 | ENST00000238721 | PAXBP1 | chr21 | 34131391 | - | TP53I3 | chr2 | 24300631 | - |
| In-frame | ENST00000331923 | ENST00000313482 | PAXBP1 | chr21 | 34131391 | - | TP53I3 | chr2 | 24300631 | - |
| In-frame | ENST00000331923 | ENST00000407482 | PAXBP1 | chr21 | 34131391 | - | TP53I3 | chr2 | 24300631 | - |
| 5CDS-intron | ENST00000331923 | ENST00000417886 | PAXBP1 | chr21 | 34131391 | - | TP53I3 | chr2 | 24300631 | - |
| Frame-shift | ENST00000290178 | ENST00000335934 | PAXBP1 | chr21 | 34131391 | - | TP53I3 | chr2 | 24300631 | - |
| Frame-shift | ENST00000290178 | ENST00000238721 | PAXBP1 | chr21 | 34131391 | - | TP53I3 | chr2 | 24300631 | - |
| In-frame | ENST00000290178 | ENST00000313482 | PAXBP1 | chr21 | 34131391 | - | TP53I3 | chr2 | 24300631 | - |
| In-frame | ENST00000290178 | ENST00000407482 | PAXBP1 | chr21 | 34131391 | - | TP53I3 | chr2 | 24300631 | - |
| 5CDS-intron | ENST00000290178 | ENST00000417886 | PAXBP1 | chr21 | 34131391 | - | TP53I3 | chr2 | 24300631 | - |
| 5UTR-3CDS | ENST00000472588 | ENST00000335934 | PAXBP1 | chr21 | 34131391 | - | TP53I3 | chr2 | 24300631 | - |
| 5UTR-3CDS | ENST00000472588 | ENST00000238721 | PAXBP1 | chr21 | 34131391 | - | TP53I3 | chr2 | 24300631 | - |
| 5UTR-3CDS | ENST00000472588 | ENST00000313482 | PAXBP1 | chr21 | 34131391 | - | TP53I3 | chr2 | 24300631 | - |
| 5UTR-3CDS | ENST00000472588 | ENST00000407482 | PAXBP1 | chr21 | 34131391 | - | TP53I3 | chr2 | 24300631 | - |
| 5UTR-intron | ENST00000472588 | ENST00000417886 | PAXBP1 | chr21 | 34131391 | - | TP53I3 | chr2 | 24300631 | - |
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FusionProtFeatures for PAXBP1_TP53I3 |
| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| PAXBP1 | TP53I3 |
| Adapter protein linking the transcription factors PAX3and PAX7 to the histone methylation machinery and involved inmyogenesis. Associates with a histone methyltransferase complexthat specifically mediates dimethylation and trimethylation of'Lys-4' of histone H3. Mediates the recruitment of that complex tothe transcription factors PAX3 and PAX7 on chromatin to regulatethe expression of genes involved in muscle progenitor cellsproliferation including ID3 and CDC20 (By similarity).{ECO:0000250}. | May be involved in the generation of reactive oxygenspecies (ROS). Has low NADPH-dependent beta-naphthoquinonereductase activity, with a preference for 1,2-beta-naphthoquinoneover 1,4-beta-naphthoquinone. Has low NADPH-dependent diaminereductase activity (in vitro). {ECO:0000269|PubMed:19349281}. |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
| - In-frame and retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| - In-frame and not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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FusionGeneSequence for PAXBP1_TP53I3 |
| For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
| * Fusion amino acid sequences. |
| >In-frame_PAXBP1_ENST00000331923_chr21_34131391_-_TP53I3_ENST00000313482_chr2_24300631_-_503aa MFRKARRVNVRKRNDSEEEERERDEEQEPPPLLPPPGTGEEAGPGGGDRAPGGESLLGPGPSPPSALTPGLGAEAGGGFPGGAEPGNGLK PRKRPRENKEVPRASLLSFQDEEEENEEVFKVKKSSYSKKIVKLLKKEYKEDLEKSKIKTELNSSAESEQPLDKTGHVKDTNQEDGVIIS EHGEDEMDMESEKEEEKPKTGGAFSNALSSLNVLRPGEIPDAAFIHAARKKRQMARELGDFTPHDNEPGKGRLVREDENDASDDEDDDEK RRIVFSVKEKSQRQKIAEEIGIEGSDDDALVTGEQDEELSRWEQEQIRKGINIPQVQASQPAEVNMYYQNTYQTMPYGSSYGIPYSYTAY GSSDAKSQKTDNTVPFKTPSNEMTPVTIDLVKKQLKDRLDSMKELHKTNRQQHEKHLQSRVDSTRAIERLEGSSGGIGERYKFLQEMRGY >In-frame_PAXBP1_ENST00000331923_chr21_34131391_-_TP53I3_ENST00000407482_chr2_24300631_-_503aa MFRKARRVNVRKRNDSEEEERERDEEQEPPPLLPPPGTGEEAGPGGGDRAPGGESLLGPGPSPPSALTPGLGAEAGGGFPGGAEPGNGLK PRKRPRENKEVPRASLLSFQDEEEENEEVFKVKKSSYSKKIVKLLKKEYKEDLEKSKIKTELNSSAESEQPLDKTGHVKDTNQEDGVIIS EHGEDEMDMESEKEEEKPKTGGAFSNALSSLNVLRPGEIPDAAFIHAARKKRQMARELGDFTPHDNEPGKGRLVREDENDASDDEDDDEK RRIVFSVKEKSQRQKIAEEIGIEGSDDDALVTGEQDEELSRWEQEQIRKGINIPQVQASQPAEVNMYYQNTYQTMPYGSSYGIPYSYTAY GSSDAKSQKTDNTVPFKTPSNEMTPVTIDLVKKQLKDRLDSMKELHKTNRQQHEKHLQSRVDSTRAIERLEGSSGGIGERYKFLQEMRGY >In-frame_PAXBP1_ENST00000290178_chr21_34131391_-_TP53I3_ENST00000313482_chr2_24300631_-_503aa MFRKARRVNVRKRNDSEEEERERDEEQEPPPLLPPPGTGEEAGPGGGDRAPGGESLLGPGPSPPSALTPGLGAEAGGGFPGGAEPGNGLK PRKRPRENKEVPRASLLSFQDEEEENEEVFKVKKSSYSKKIVKLLKKEYKEDLEKSKIKTELNSSAESEQPLDKTGHVKDTNQEDGVIIS EHGEDEMDMESEKEEEKPKTGGAFSNALSSLNVLRPGEIPDAAFIHAARKKRQMARELGDFTPHDNEPGKGRLVREDENDASDDEDDDEK RRIVFSVKEKSQRQKIAEEIGIEGSDDDALVTGEQDEELSRWEQEQIRKGINIPQVQASQPAEVNMYYQNTYQTMPYGSSYGIPYSYTAY GSSDAKSQKTDNTVPFKTPSNEMTPVTIDLVKKQLKDRLDSMKELHKTNRQQHEKHLQSRVDSTRAIERLEGSSGGIGERYKFLQEMRGY >In-frame_PAXBP1_ENST00000290178_chr21_34131391_-_TP53I3_ENST00000407482_chr2_24300631_-_503aa MFRKARRVNVRKRNDSEEEERERDEEQEPPPLLPPPGTGEEAGPGGGDRAPGGESLLGPGPSPPSALTPGLGAEAGGGFPGGAEPGNGLK PRKRPRENKEVPRASLLSFQDEEEENEEVFKVKKSSYSKKIVKLLKKEYKEDLEKSKIKTELNSSAESEQPLDKTGHVKDTNQEDGVIIS EHGEDEMDMESEKEEEKPKTGGAFSNALSSLNVLRPGEIPDAAFIHAARKKRQMARELGDFTPHDNEPGKGRLVREDENDASDDEDDDEK RRIVFSVKEKSQRQKIAEEIGIEGSDDDALVTGEQDEELSRWEQEQIRKGINIPQVQASQPAEVNMYYQNTYQTMPYGSSYGIPYSYTAY GSSDAKSQKTDNTVPFKTPSNEMTPVTIDLVKKQLKDRLDSMKELHKTNRQQHEKHLQSRVDSTRAIERLEGSSGGIGERYKFLQEMRGY |
| * Fusion transcript sequences (only coding sequence (CDS) region). |
| >In-frame_PAXBP1_ENST00000331923_chr21_34131391_-_TP53I3_ENST00000313482_chr2_24300631_-_1511nt ATGTTCCGAAAGGCCCGGCGGGTGAACGTGCGCAAGCGGAACGACTCCGAAGAGGAAGAGCGGGAACGCGATGAGGAGCAGGAGCCGCCG CCGTTGTTGCCGCCGCCGGGCACGGGCGAAGAGGCGGGCCCCGGTGGCGGCGACAGGGCCCCTGGCGGGGAGTCGCTGCTGGGCCCGGGG CCGTCGCCGCCTTCCGCGCTGACCCCGGGCCTCGGGGCTGAGGCCGGGGGCGGCTTCCCCGGCGGCGCGGAGCCCGGCAACGGGCTGAAG CCGCGCAAGAGGCCTCGCGAGAACAAAGAGGTGCCCCGGGCCAGCCTGCTCAGCTTCCAGGACGAGGAGGAAGAAAATGAAGAAGTTTTC AAAGTGAAGAAATCAAGTTATAGCAAAAAGATAGTAAAATTGCTCAAGAAGGAATATAAAGAAGATCTTGAAAAATCGAAGATTAAGACA GAACTCAACTCATCAGCTGAAAGTGAACAACCTTTGGACAAAACAGGACATGTTAAGGATACAAATCAAGAAGATGGAGTTATCATCAGT GAACATGGTGAAGATGAAATGGATATGGAAAGTGAAAAAGAGGAAGAAAAGCCAAAGACTGGTGGAGCTTTTTCAAATGCTTTATCTTCA TTGAATGTTCTTCGTCCAGGAGAAATTCCAGATGCAGCTTTTATACATGCTGCAAGGAAAAAGCGCCAAATGGCCCGAGAATTGGGAGAT TTCACTCCTCATGATAATGAGCCTGGTAAAGGCCGCCTTGTTAGAGAAGATGAGAATGATGCCAGTGATGATGAAGATGACGATGAGAAA CGCCGGATAGTTTTTTCTGTGAAAGAAAAGTCACAAAGACAAAAAATTGCTGAGGAAATAGGAATTGAGGGGAGTGATGATGATGCTTTA GTAACTGGAGAACAGGATGAAGAGCTCAGCCGATGGGAACAGGAGCAGATAAGGAAAGGAATTAATATCCCTCAGGTTCAAGCCAGTCAA CCCGCAGAAGTGAATATGTACTACCAGAACACTTACCAGACAATGCCTTACGGCTCATCCTATGGCATTCCTTATAGTTATACGGCCTAT GGATCATCAGATGCCAAATCTCAAAAAACAGATAATACAGTCCCTTTCAAAACTCCCAGTAATGAGATGACTCCCGTTACTATTGATTTG GTAAAGAAACAGCTTAAAGACAGGTTGGACTCCATGAAAGAATTGCACAAAACAAATCGACAGCAGCATGAGAAACATCTGCAAAGCCGA GTGGACTCTACCAGGGCTATTGAAAGATTAGAAGGGTCTTCTGGGGGTATTGGTGAACGGTATAAATTTTTGCAAGAAATGCGAGGGTAT GTCCAAGACTTGCTTGAGTGTTTCAGTGAAAAGTACAAGCAAATGCTGGTGAATGCTTTCACGGAGCAAATTCTGCCTCACTTCTCCACG >In-frame_PAXBP1_ENST00000331923_chr21_34131391_-_TP53I3_ENST00000407482_chr2_24300631_-_1511nt ATGTTCCGAAAGGCCCGGCGGGTGAACGTGCGCAAGCGGAACGACTCCGAAGAGGAAGAGCGGGAACGCGATGAGGAGCAGGAGCCGCCG CCGTTGTTGCCGCCGCCGGGCACGGGCGAAGAGGCGGGCCCCGGTGGCGGCGACAGGGCCCCTGGCGGGGAGTCGCTGCTGGGCCCGGGG CCGTCGCCGCCTTCCGCGCTGACCCCGGGCCTCGGGGCTGAGGCCGGGGGCGGCTTCCCCGGCGGCGCGGAGCCCGGCAACGGGCTGAAG CCGCGCAAGAGGCCTCGCGAGAACAAAGAGGTGCCCCGGGCCAGCCTGCTCAGCTTCCAGGACGAGGAGGAAGAAAATGAAGAAGTTTTC AAAGTGAAGAAATCAAGTTATAGCAAAAAGATAGTAAAATTGCTCAAGAAGGAATATAAAGAAGATCTTGAAAAATCGAAGATTAAGACA GAACTCAACTCATCAGCTGAAAGTGAACAACCTTTGGACAAAACAGGACATGTTAAGGATACAAATCAAGAAGATGGAGTTATCATCAGT GAACATGGTGAAGATGAAATGGATATGGAAAGTGAAAAAGAGGAAGAAAAGCCAAAGACTGGTGGAGCTTTTTCAAATGCTTTATCTTCA TTGAATGTTCTTCGTCCAGGAGAAATTCCAGATGCAGCTTTTATACATGCTGCAAGGAAAAAGCGCCAAATGGCCCGAGAATTGGGAGAT TTCACTCCTCATGATAATGAGCCTGGTAAAGGCCGCCTTGTTAGAGAAGATGAGAATGATGCCAGTGATGATGAAGATGACGATGAGAAA CGCCGGATAGTTTTTTCTGTGAAAGAAAAGTCACAAAGACAAAAAATTGCTGAGGAAATAGGAATTGAGGGGAGTGATGATGATGCTTTA GTAACTGGAGAACAGGATGAAGAGCTCAGCCGATGGGAACAGGAGCAGATAAGGAAAGGAATTAATATCCCTCAGGTTCAAGCCAGTCAA CCCGCAGAAGTGAATATGTACTACCAGAACACTTACCAGACAATGCCTTACGGCTCATCCTATGGCATTCCTTATAGTTATACGGCCTAT GGATCATCAGATGCCAAATCTCAAAAAACAGATAATACAGTCCCTTTCAAAACTCCCAGTAATGAGATGACTCCCGTTACTATTGATTTG GTAAAGAAACAGCTTAAAGACAGGTTGGACTCCATGAAAGAATTGCACAAAACAAATCGACAGCAGCATGAGAAACATCTGCAAAGCCGA GTGGACTCTACCAGGGCTATTGAAAGATTAGAAGGGTCTTCTGGGGGTATTGGTGAACGGTATAAATTTTTGCAAGAAATGCGAGGGTAT GTCCAAGACTTGCTTGAGTGTTTCAGTGAAAAGTACAAGCAAATGCTGGTGAATGCTTTCACGGAGCAAATTCTGCCTCACTTCTCCACG >In-frame_PAXBP1_ENST00000290178_chr21_34131391_-_TP53I3_ENST00000313482_chr2_24300631_-_1511nt ATGTTCCGAAAGGCCCGGCGGGTGAACGTGCGCAAGCGGAACGACTCCGAAGAGGAAGAGCGGGAACGCGATGAGGAGCAGGAGCCGCCG CCGTTGTTGCCGCCGCCGGGCACGGGCGAAGAGGCGGGCCCCGGTGGCGGCGACAGGGCCCCTGGCGGGGAGTCGCTGCTGGGCCCGGGG CCGTCGCCGCCTTCCGCGCTGACCCCGGGCCTCGGGGCTGAGGCCGGGGGCGGCTTCCCCGGCGGCGCGGAGCCCGGCAACGGGCTGAAG CCGCGCAAGAGGCCTCGCGAGAACAAAGAGGTGCCCCGGGCCAGCCTGCTCAGCTTCCAGGACGAGGAGGAAGAAAATGAAGAAGTTTTC AAAGTGAAGAAATCAAGTTATAGCAAAAAGATAGTAAAATTGCTCAAGAAGGAATATAAAGAAGATCTTGAAAAATCGAAGATTAAGACA GAACTCAACTCATCAGCTGAAAGTGAACAACCTTTGGACAAAACAGGACATGTTAAGGATACAAATCAAGAAGATGGAGTTATCATCAGT GAACATGGTGAAGATGAAATGGATATGGAAAGTGAAAAAGAGGAAGAAAAGCCAAAGACTGGTGGAGCTTTTTCAAATGCTTTATCTTCA TTGAATGTTCTTCGTCCAGGAGAAATTCCAGATGCAGCTTTTATACATGCTGCAAGGAAAAAGCGCCAAATGGCCCGAGAATTGGGAGAT TTCACTCCTCATGATAATGAGCCTGGTAAAGGCCGCCTTGTTAGAGAAGATGAGAATGATGCCAGTGATGATGAAGATGACGATGAGAAA CGCCGGATAGTTTTTTCTGTGAAAGAAAAGTCACAAAGACAAAAAATTGCTGAGGAAATAGGAATTGAGGGGAGTGATGATGATGCTTTA GTAACTGGAGAACAGGATGAAGAGCTCAGCCGATGGGAACAGGAGCAGATAAGGAAAGGAATTAATATCCCTCAGGTTCAAGCCAGTCAA CCCGCAGAAGTGAATATGTACTACCAGAACACTTACCAGACAATGCCTTACGGCTCATCCTATGGCATTCCTTATAGTTATACGGCCTAT GGATCATCAGATGCCAAATCTCAAAAAACAGATAATACAGTCCCTTTCAAAACTCCCAGTAATGAGATGACTCCCGTTACTATTGATTTG GTAAAGAAACAGCTTAAAGACAGGTTGGACTCCATGAAAGAATTGCACAAAACAAATCGACAGCAGCATGAGAAACATCTGCAAAGCCGA GTGGACTCTACCAGGGCTATTGAAAGATTAGAAGGGTCTTCTGGGGGTATTGGTGAACGGTATAAATTTTTGCAAGAAATGCGAGGGTAT GTCCAAGACTTGCTTGAGTGTTTCAGTGAAAAGTACAAGCAAATGCTGGTGAATGCTTTCACGGAGCAAATTCTGCCTCACTTCTCCACG >In-frame_PAXBP1_ENST00000290178_chr21_34131391_-_TP53I3_ENST00000407482_chr2_24300631_-_1511nt ATGTTCCGAAAGGCCCGGCGGGTGAACGTGCGCAAGCGGAACGACTCCGAAGAGGAAGAGCGGGAACGCGATGAGGAGCAGGAGCCGCCG CCGTTGTTGCCGCCGCCGGGCACGGGCGAAGAGGCGGGCCCCGGTGGCGGCGACAGGGCCCCTGGCGGGGAGTCGCTGCTGGGCCCGGGG CCGTCGCCGCCTTCCGCGCTGACCCCGGGCCTCGGGGCTGAGGCCGGGGGCGGCTTCCCCGGCGGCGCGGAGCCCGGCAACGGGCTGAAG CCGCGCAAGAGGCCTCGCGAGAACAAAGAGGTGCCCCGGGCCAGCCTGCTCAGCTTCCAGGACGAGGAGGAAGAAAATGAAGAAGTTTTC AAAGTGAAGAAATCAAGTTATAGCAAAAAGATAGTAAAATTGCTCAAGAAGGAATATAAAGAAGATCTTGAAAAATCGAAGATTAAGACA GAACTCAACTCATCAGCTGAAAGTGAACAACCTTTGGACAAAACAGGACATGTTAAGGATACAAATCAAGAAGATGGAGTTATCATCAGT GAACATGGTGAAGATGAAATGGATATGGAAAGTGAAAAAGAGGAAGAAAAGCCAAAGACTGGTGGAGCTTTTTCAAATGCTTTATCTTCA TTGAATGTTCTTCGTCCAGGAGAAATTCCAGATGCAGCTTTTATACATGCTGCAAGGAAAAAGCGCCAAATGGCCCGAGAATTGGGAGAT TTCACTCCTCATGATAATGAGCCTGGTAAAGGCCGCCTTGTTAGAGAAGATGAGAATGATGCCAGTGATGATGAAGATGACGATGAGAAA CGCCGGATAGTTTTTTCTGTGAAAGAAAAGTCACAAAGACAAAAAATTGCTGAGGAAATAGGAATTGAGGGGAGTGATGATGATGCTTTA GTAACTGGAGAACAGGATGAAGAGCTCAGCCGATGGGAACAGGAGCAGATAAGGAAAGGAATTAATATCCCTCAGGTTCAAGCCAGTCAA CCCGCAGAAGTGAATATGTACTACCAGAACACTTACCAGACAATGCCTTACGGCTCATCCTATGGCATTCCTTATAGTTATACGGCCTAT GGATCATCAGATGCCAAATCTCAAAAAACAGATAATACAGTCCCTTTCAAAACTCCCAGTAATGAGATGACTCCCGTTACTATTGATTTG GTAAAGAAACAGCTTAAAGACAGGTTGGACTCCATGAAAGAATTGCACAAAACAAATCGACAGCAGCATGAGAAACATCTGCAAAGCCGA GTGGACTCTACCAGGGCTATTGAAAGATTAGAAGGGTCTTCTGGGGGTATTGGTGAACGGTATAAATTTTTGCAAGAAATGCGAGGGTAT GTCCAAGACTTGCTTGAGTGTTTCAGTGAAAAGTACAAGCAAATGCTGGTGAATGCTTTCACGGAGCAAATTCTGCCTCACTTCTCCACG |
| * Fusion transcript sequences (Full-length transcript). |
| >In-frame_PAXBP1_ENST00000331923_chr21_34131391_-_TP53I3_ENST00000313482_chr2_24300631_-_1899nt CTCTCTCTCTTTCTCCAAGTATTGAGAGCGCGTGGGAGCATAGGCGCATGCGCGCTCGTGGGGTGCGCGGTAGCAACAGAGGACTCGACC CGGCTGGAGCTCCGGAGAGCGCGCGTGCGCCGTCACGAGCTCGGCGCTGCCGGGGCCGCGGTGTGGAAGCGAGTATTCGACCGCCGTGCG GGCCGCGGGGATGTTCCGAAAGGCCCGGCGGGTGAACGTGCGCAAGCGGAACGACTCCGAAGAGGAAGAGCGGGAACGCGATGAGGAGCA GGAGCCGCCGCCGTTGTTGCCGCCGCCGGGCACGGGCGAAGAGGCGGGCCCCGGTGGCGGCGACAGGGCCCCTGGCGGGGAGTCGCTGCT GGGCCCGGGGCCGTCGCCGCCTTCCGCGCTGACCCCGGGCCTCGGGGCTGAGGCCGGGGGCGGCTTCCCCGGCGGCGCGGAGCCCGGCAA CGGGCTGAAGCCGCGCAAGAGGCCTCGCGAGAACAAAGAGGTGCCCCGGGCCAGCCTGCTCAGCTTCCAGGACGAGGAGGAAGAAAATGA AGAAGTTTTCAAAGTGAAGAAATCAAGTTATAGCAAAAAGATAGTAAAATTGCTCAAGAAGGAATATAAAGAAGATCTTGAAAAATCGAA GATTAAGACAGAACTCAACTCATCAGCTGAAAGTGAACAACCTTTGGACAAAACAGGACATGTTAAGGATACAAATCAAGAAGATGGAGT TATCATCAGTGAACATGGTGAAGATGAAATGGATATGGAAAGTGAAAAAGAGGAAGAAAAGCCAAAGACTGGTGGAGCTTTTTCAAATGC TTTATCTTCATTGAATGTTCTTCGTCCAGGAGAAATTCCAGATGCAGCTTTTATACATGCTGCAAGGAAAAAGCGCCAAATGGCCCGAGA ATTGGGAGATTTCACTCCTCATGATAATGAGCCTGGTAAAGGCCGCCTTGTTAGAGAAGATGAGAATGATGCCAGTGATGATGAAGATGA CGATGAGAAACGCCGGATAGTTTTTTCTGTGAAAGAAAAGTCACAAAGACAAAAAATTGCTGAGGAAATAGGAATTGAGGGGAGTGATGA TGATGCTTTAGTAACTGGAGAACAGGATGAAGAGCTCAGCCGATGGGAACAGGAGCAGATAAGGAAAGGAATTAATATCCCTCAGGTTCA AGCCAGTCAACCCGCAGAAGTGAATATGTACTACCAGAACACTTACCAGACAATGCCTTACGGCTCATCCTATGGCATTCCTTATAGTTA TACGGCCTATGGATCATCAGATGCCAAATCTCAAAAAACAGATAATACAGTCCCTTTCAAAACTCCCAGTAATGAGATGACTCCCGTTAC TATTGATTTGGTAAAGAAACAGCTTAAAGACAGGTTGGACTCCATGAAAGAATTGCACAAAACAAATCGACAGCAGCATGAGAAACATCT GCAAAGCCGAGTGGACTCTACCAGGGCTATTGAAAGATTAGAAGGGTCTTCTGGGGGTATTGGTGAACGGTATAAATTTTTGCAAGAAAT GCGAGGGTATGTCCAAGACTTGCTTGAGTGTTTCAGTGAAAAGTACAAGCAAATGCTGGTGAATGCTTTCACGGAGCAAATTCTGCCTCA CTTCTCCACGGAGGGCCCCCAACGTCTGCTGCCGGTTCTGGACAGAATCTACCCAGTGACCGAAATCCAGGAGGCCCATAAGTACATGGA GGCCAACAAGAACATAGGCAAGATCGTCCTGGAACTGCCCCAGTGAAGGAGGATGGGGCAGGACAGGACGCGGCCACCCCAGGCCTTTCC AGAGCAAACCTGGAGAAGATTCACAATAGACAGGCCAAGAAACCCGGTGCTTCCTCCAGAGCCGTTTAAAGCTGATATGAGGAAATAAAG >In-frame_PAXBP1_ENST00000331923_chr21_34131391_-_TP53I3_ENST00000407482_chr2_24300631_-_1701nt CTCTCTCTCTTTCTCCAAGTATTGAGAGCGCGTGGGAGCATAGGCGCATGCGCGCTCGTGGGGTGCGCGGTAGCAACAGAGGACTCGACC CGGCTGGAGCTCCGGAGAGCGCGCGTGCGCCGTCACGAGCTCGGCGCTGCCGGGGCCGCGGTGTGGAAGCGAGTATTCGACCGCCGTGCG GGCCGCGGGGATGTTCCGAAAGGCCCGGCGGGTGAACGTGCGCAAGCGGAACGACTCCGAAGAGGAAGAGCGGGAACGCGATGAGGAGCA GGAGCCGCCGCCGTTGTTGCCGCCGCCGGGCACGGGCGAAGAGGCGGGCCCCGGTGGCGGCGACAGGGCCCCTGGCGGGGAGTCGCTGCT GGGCCCGGGGCCGTCGCCGCCTTCCGCGCTGACCCCGGGCCTCGGGGCTGAGGCCGGGGGCGGCTTCCCCGGCGGCGCGGAGCCCGGCAA CGGGCTGAAGCCGCGCAAGAGGCCTCGCGAGAACAAAGAGGTGCCCCGGGCCAGCCTGCTCAGCTTCCAGGACGAGGAGGAAGAAAATGA AGAAGTTTTCAAAGTGAAGAAATCAAGTTATAGCAAAAAGATAGTAAAATTGCTCAAGAAGGAATATAAAGAAGATCTTGAAAAATCGAA GATTAAGACAGAACTCAACTCATCAGCTGAAAGTGAACAACCTTTGGACAAAACAGGACATGTTAAGGATACAAATCAAGAAGATGGAGT TATCATCAGTGAACATGGTGAAGATGAAATGGATATGGAAAGTGAAAAAGAGGAAGAAAAGCCAAAGACTGGTGGAGCTTTTTCAAATGC TTTATCTTCATTGAATGTTCTTCGTCCAGGAGAAATTCCAGATGCAGCTTTTATACATGCTGCAAGGAAAAAGCGCCAAATGGCCCGAGA ATTGGGAGATTTCACTCCTCATGATAATGAGCCTGGTAAAGGCCGCCTTGTTAGAGAAGATGAGAATGATGCCAGTGATGATGAAGATGA CGATGAGAAACGCCGGATAGTTTTTTCTGTGAAAGAAAAGTCACAAAGACAAAAAATTGCTGAGGAAATAGGAATTGAGGGGAGTGATGA TGATGCTTTAGTAACTGGAGAACAGGATGAAGAGCTCAGCCGATGGGAACAGGAGCAGATAAGGAAAGGAATTAATATCCCTCAGGTTCA AGCCAGTCAACCCGCAGAAGTGAATATGTACTACCAGAACACTTACCAGACAATGCCTTACGGCTCATCCTATGGCATTCCTTATAGTTA TACGGCCTATGGATCATCAGATGCCAAATCTCAAAAAACAGATAATACAGTCCCTTTCAAAACTCCCAGTAATGAGATGACTCCCGTTAC TATTGATTTGGTAAAGAAACAGCTTAAAGACAGGTTGGACTCCATGAAAGAATTGCACAAAACAAATCGACAGCAGCATGAGAAACATCT GCAAAGCCGAGTGGACTCTACCAGGGCTATTGAAAGATTAGAAGGGTCTTCTGGGGGTATTGGTGAACGGTATAAATTTTTGCAAGAAAT GCGAGGGTATGTCCAAGACTTGCTTGAGTGTTTCAGTGAAAAGTACAAGCAAATGCTGGTGAATGCTTTCACGGAGCAAATTCTGCCTCA >In-frame_PAXBP1_ENST00000290178_chr21_34131391_-_TP53I3_ENST00000313482_chr2_24300631_-_1709nt ATGTTCCGAAAGGCCCGGCGGGTGAACGTGCGCAAGCGGAACGACTCCGAAGAGGAAGAGCGGGAACGCGATGAGGAGCAGGAGCCGCCG CCGTTGTTGCCGCCGCCGGGCACGGGCGAAGAGGCGGGCCCCGGTGGCGGCGACAGGGCCCCTGGCGGGGAGTCGCTGCTGGGCCCGGGG CCGTCGCCGCCTTCCGCGCTGACCCCGGGCCTCGGGGCTGAGGCCGGGGGCGGCTTCCCCGGCGGCGCGGAGCCCGGCAACGGGCTGAAG CCGCGCAAGAGGCCTCGCGAGAACAAAGAGGTGCCCCGGGCCAGCCTGCTCAGCTTCCAGGACGAGGAGGAAGAAAATGAAGAAGTTTTC AAAGTGAAGAAATCAAGTTATAGCAAAAAGATAGTAAAATTGCTCAAGAAGGAATATAAAGAAGATCTTGAAAAATCGAAGATTAAGACA GAACTCAACTCATCAGCTGAAAGTGAACAACCTTTGGACAAAACAGGACATGTTAAGGATACAAATCAAGAAGATGGAGTTATCATCAGT GAACATGGTGAAGATGAAATGGATATGGAAAGTGAAAAAGAGGAAGAAAAGCCAAAGACTGGTGGAGCTTTTTCAAATGCTTTATCTTCA TTGAATGTTCTTCGTCCAGGAGAAATTCCAGATGCAGCTTTTATACATGCTGCAAGGAAAAAGCGCCAAATGGCCCGAGAATTGGGAGAT TTCACTCCTCATGATAATGAGCCTGGTAAAGGCCGCCTTGTTAGAGAAGATGAGAATGATGCCAGTGATGATGAAGATGACGATGAGAAA CGCCGGATAGTTTTTTCTGTGAAAGAAAAGTCACAAAGACAAAAAATTGCTGAGGAAATAGGAATTGAGGGGAGTGATGATGATGCTTTA GTAACTGGAGAACAGGATGAAGAGCTCAGCCGATGGGAACAGGAGCAGATAAGGAAAGGAATTAATATCCCTCAGGTTCAAGCCAGTCAA CCCGCAGAAGTGAATATGTACTACCAGAACACTTACCAGACAATGCCTTACGGCTCATCCTATGGCATTCCTTATAGTTATACGGCCTAT GGATCATCAGATGCCAAATCTCAAAAAACAGATAATACAGTCCCTTTCAAAACTCCCAGTAATGAGATGACTCCCGTTACTATTGATTTG GTAAAGAAACAGCTTAAAGACAGGTTGGACTCCATGAAAGAATTGCACAAAACAAATCGACAGCAGCATGAGAAACATCTGCAAAGCCGA GTGGACTCTACCAGGGCTATTGAAAGATTAGAAGGGTCTTCTGGGGGTATTGGTGAACGGTATAAATTTTTGCAAGAAATGCGAGGGTAT GTCCAAGACTTGCTTGAGTGTTTCAGTGAAAAGTACAAGCAAATGCTGGTGAATGCTTTCACGGAGCAAATTCTGCCTCACTTCTCCACG GAGGGCCCCCAACGTCTGCTGCCGGTTCTGGACAGAATCTACCCAGTGACCGAAATCCAGGAGGCCCATAAGTACATGGAGGCCAACAAG AACATAGGCAAGATCGTCCTGGAACTGCCCCAGTGAAGGAGGATGGGGCAGGACAGGACGCGGCCACCCCAGGCCTTTCCAGAGCAAACC >In-frame_PAXBP1_ENST00000290178_chr21_34131391_-_TP53I3_ENST00000407482_chr2_24300631_-_1511nt ATGTTCCGAAAGGCCCGGCGGGTGAACGTGCGCAAGCGGAACGACTCCGAAGAGGAAGAGCGGGAACGCGATGAGGAGCAGGAGCCGCCG CCGTTGTTGCCGCCGCCGGGCACGGGCGAAGAGGCGGGCCCCGGTGGCGGCGACAGGGCCCCTGGCGGGGAGTCGCTGCTGGGCCCGGGG CCGTCGCCGCCTTCCGCGCTGACCCCGGGCCTCGGGGCTGAGGCCGGGGGCGGCTTCCCCGGCGGCGCGGAGCCCGGCAACGGGCTGAAG CCGCGCAAGAGGCCTCGCGAGAACAAAGAGGTGCCCCGGGCCAGCCTGCTCAGCTTCCAGGACGAGGAGGAAGAAAATGAAGAAGTTTTC AAAGTGAAGAAATCAAGTTATAGCAAAAAGATAGTAAAATTGCTCAAGAAGGAATATAAAGAAGATCTTGAAAAATCGAAGATTAAGACA GAACTCAACTCATCAGCTGAAAGTGAACAACCTTTGGACAAAACAGGACATGTTAAGGATACAAATCAAGAAGATGGAGTTATCATCAGT GAACATGGTGAAGATGAAATGGATATGGAAAGTGAAAAAGAGGAAGAAAAGCCAAAGACTGGTGGAGCTTTTTCAAATGCTTTATCTTCA TTGAATGTTCTTCGTCCAGGAGAAATTCCAGATGCAGCTTTTATACATGCTGCAAGGAAAAAGCGCCAAATGGCCCGAGAATTGGGAGAT TTCACTCCTCATGATAATGAGCCTGGTAAAGGCCGCCTTGTTAGAGAAGATGAGAATGATGCCAGTGATGATGAAGATGACGATGAGAAA CGCCGGATAGTTTTTTCTGTGAAAGAAAAGTCACAAAGACAAAAAATTGCTGAGGAAATAGGAATTGAGGGGAGTGATGATGATGCTTTA GTAACTGGAGAACAGGATGAAGAGCTCAGCCGATGGGAACAGGAGCAGATAAGGAAAGGAATTAATATCCCTCAGGTTCAAGCCAGTCAA CCCGCAGAAGTGAATATGTACTACCAGAACACTTACCAGACAATGCCTTACGGCTCATCCTATGGCATTCCTTATAGTTATACGGCCTAT GGATCATCAGATGCCAAATCTCAAAAAACAGATAATACAGTCCCTTTCAAAACTCCCAGTAATGAGATGACTCCCGTTACTATTGATTTG GTAAAGAAACAGCTTAAAGACAGGTTGGACTCCATGAAAGAATTGCACAAAACAAATCGACAGCAGCATGAGAAACATCTGCAAAGCCGA GTGGACTCTACCAGGGCTATTGAAAGATTAGAAGGGTCTTCTGGGGGTATTGGTGAACGGTATAAATTTTTGCAAGAAATGCGAGGGTAT GTCCAAGACTTGCTTGAGTGTTTCAGTGAAAAGTACAAGCAAATGCTGGTGAATGCTTTCACGGAGCAAATTCTGCCTCACTTCTCCACG |
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FusionGenePPI for PAXBP1_TP53I3 |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
| Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
| Hgene | Hgene's interactors | Tgene | Tgene's interactors |
| PAXBP1 | TERF2, HDAC11, MOV10, NXF1, BMI1, DDX23, TSSC4, RSRC1, SNRNP40, TFIP11, USP37, JMJD6, SNRPE, SNRPG, SNRPN, SNRPF, JPH4, SLC22A23, KIAA1143 | TP53I3 | FUNDC2, EEF1G, UBR1, UNC119, H2AFX, TP53BP1, PLK1, TLDC1, HMBS, GPX3 |
| - Retained PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| - Lost PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
| - Retained PPIs, but lost function due to frame-shift fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for PAXBP1_TP53I3 |
| Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
| Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for PAXBP1_TP53I3 |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
| Tgene | TP53I3 | C0024667 | Animal Mammary Neoplasms | 1 | CTD_human |
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