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Center for Computational Systems Medicine
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FusionGeneSummary

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FusionProtFeature

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FusionGeneSequence

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FusionGenePPI

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RelatedDrugs

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RelatedDiseases

Fusion gene ID: 2467

FusionGeneSummary for ARHGAP4_ARHGAP4

check button Fusion gene summary
Fusion gene informationFusion gene name: ARHGAP4_ARHGAP4
Fusion gene ID: 2467
HgeneTgene
Gene symbol

ARHGAP4

ARHGAP4

Gene ID

393

393

Gene nameRho GTPase activating protein 4Rho GTPase activating protein 4
SynonymsC1|RGC1|RhoGAP4|SrGAP4|p115C1|RGC1|RhoGAP4|SrGAP4|p115
Cytomap

Xq28

Xq28

Type of geneprotein-codingprotein-coding
Descriptionrho GTPase-activating protein 4Rho-GAP hematopoietic protein C1rho-type GTPase-activating protein 4rho GTPase-activating protein 4Rho-GAP hematopoietic protein C1rho-type GTPase-activating protein 4
Modification date2018052320180523
UniProtAcc

P98171

P98171

Ensembl transtripts involved in fusion geneENST00000393721, ENST00000370028, 
ENST00000350060, ENST00000370016, 
ENST00000537206, ENST00000467421, 
ENST00000393721, ENST00000370028, 
ENST00000350060, ENST00000370016, 
ENST00000537206, ENST00000467421, 
Fusion gene scores* DoF score2 X 4 X 2=161 X 3 X 1=3
# samples 65
** MAII scorelog2(6/16*10)=1.90689059560852
effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs).
DoF>8 and MAII>0
log2(5/3*10)=4.05889368905357
Context

PubMed: ARHGAP4 [Title/Abstract] AND ARHGAP4 [Title/Abstract] AND fusion [Title/Abstract]

Functional or gene categories assigned by FusionGDB annotation
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID

check button Fusion gene information from three resources
(ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018))
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
Data typeSourceCancer typeSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChiTaRS3.1EL583420ARHGAP4chrX

153191215

+ARHGAP4chrX

153191341

-
ChiTaRS3.1EL583796ARHGAP4chrX

153191338

+ARHGAP4chrX

153191215

-
ChiTaRS3.1EL583776ARHGAP4chrX

153191341

+ARHGAP4chrX

153191215

-
ChiTaRS3.1EL583440ARHGAP4chrX

153191215

+ARHGAP4chrX

153191338

-
ChiTaRS3.1EL583436ARHGAP4chrX

153191215

+ARHGAP4chrX

153191338

-
* LD: Li Ding group's fusion gene list
  RV: Roel Verhaak group's fusion gene list
  ChiTaRs fusion database

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
intron-intronENST00000393721ENST00000393721ARHGAP4chrX

153191215

+ARHGAP4chrX

153191341

-
intron-intronENST00000393721ENST00000370028ARHGAP4chrX

153191215

+ARHGAP4chrX

153191341

-
intron-intronENST00000393721ENST00000350060ARHGAP4chrX

153191215

+ARHGAP4chrX

153191341

-
intron-intronENST00000393721ENST00000370016ARHGAP4chrX

153191215

+ARHGAP4chrX

153191341

-
intron-intronENST00000393721ENST00000537206ARHGAP4chrX

153191215

+ARHGAP4chrX

153191341

-
intron-intronENST00000393721ENST00000467421ARHGAP4chrX

153191215

+ARHGAP4chrX

153191341

-
intron-intronENST00000370028ENST00000393721ARHGAP4chrX

153191215

+ARHGAP4chrX

153191341

-
intron-intronENST00000370028ENST00000370028ARHGAP4chrX

153191215

+ARHGAP4chrX

153191341

-
intron-intronENST00000370028ENST00000350060ARHGAP4chrX

153191215

+ARHGAP4chrX

153191341

-
intron-intronENST00000370028ENST00000370016ARHGAP4chrX

153191215

+ARHGAP4chrX

153191341

-
intron-intronENST00000370028ENST00000537206ARHGAP4chrX

153191215

+ARHGAP4chrX

153191341

-
intron-intronENST00000370028ENST00000467421ARHGAP4chrX

153191215

+ARHGAP4chrX

153191341

-
intron-intronENST00000350060ENST00000393721ARHGAP4chrX

153191215

+ARHGAP4chrX

153191341

-
intron-intronENST00000350060ENST00000370028ARHGAP4chrX

153191215

+ARHGAP4chrX

153191341

-
intron-intronENST00000350060ENST00000350060ARHGAP4chrX

153191215

+ARHGAP4chrX

153191341

-
intron-intronENST00000350060ENST00000370016ARHGAP4chrX

153191215

+ARHGAP4chrX

153191341

-
intron-intronENST00000350060ENST00000537206ARHGAP4chrX

153191215

+ARHGAP4chrX

153191341

-
intron-intronENST00000350060ENST00000467421ARHGAP4chrX

153191215

+ARHGAP4chrX

153191341

-
intron-intronENST00000370016ENST00000393721ARHGAP4chrX

153191215

+ARHGAP4chrX

153191341

-
intron-intronENST00000370016ENST00000370028ARHGAP4chrX

153191215

+ARHGAP4chrX

153191341

-
intron-intronENST00000370016ENST00000350060ARHGAP4chrX

153191215

+ARHGAP4chrX

153191341

-
intron-intronENST00000370016ENST00000370016ARHGAP4chrX

153191215

+ARHGAP4chrX

153191341

-
intron-intronENST00000370016ENST00000537206ARHGAP4chrX

153191215

+ARHGAP4chrX

153191341

-
intron-intronENST00000370016ENST00000467421ARHGAP4chrX

153191215

+ARHGAP4chrX

153191341

-
intron-intronENST00000537206ENST00000393721ARHGAP4chrX

153191215

+ARHGAP4chrX

153191341

-
intron-intronENST00000537206ENST00000370028ARHGAP4chrX

153191215

+ARHGAP4chrX

153191341

-
intron-intronENST00000537206ENST00000350060ARHGAP4chrX

153191215

+ARHGAP4chrX

153191341

-
intron-intronENST00000537206ENST00000370016ARHGAP4chrX

153191215

+ARHGAP4chrX

153191341

-
intron-intronENST00000537206ENST00000537206ARHGAP4chrX

153191215

+ARHGAP4chrX

153191341

-
intron-intronENST00000537206ENST00000467421ARHGAP4chrX

153191215

+ARHGAP4chrX

153191341

-
intron-intronENST00000467421ENST00000393721ARHGAP4chrX

153191215

+ARHGAP4chrX

153191341

-
intron-intronENST00000467421ENST00000370028ARHGAP4chrX

153191215

+ARHGAP4chrX

153191341

-
intron-intronENST00000467421ENST00000350060ARHGAP4chrX

153191215

+ARHGAP4chrX

153191341

-
intron-intronENST00000467421ENST00000370016ARHGAP4chrX

153191215

+ARHGAP4chrX

153191341

-
intron-intronENST00000467421ENST00000537206ARHGAP4chrX

153191215

+ARHGAP4chrX

153191341

-
intron-intronENST00000467421ENST00000467421ARHGAP4chrX

153191215

+ARHGAP4chrX

153191341

-
intron-intronENST00000393721ENST00000393721ARHGAP4chrX

153191338

+ARHGAP4chrX

153191215

-
intron-intronENST00000393721ENST00000370028ARHGAP4chrX

153191338

+ARHGAP4chrX

153191215

-
intron-intronENST00000393721ENST00000350060ARHGAP4chrX

153191338

+ARHGAP4chrX

153191215

-
intron-intronENST00000393721ENST00000370016ARHGAP4chrX

153191338

+ARHGAP4chrX

153191215

-
intron-intronENST00000393721ENST00000537206ARHGAP4chrX

153191338

+ARHGAP4chrX

153191215

-
intron-intronENST00000393721ENST00000467421ARHGAP4chrX

153191338

+ARHGAP4chrX

153191215

-
intron-intronENST00000370028ENST00000393721ARHGAP4chrX

153191338

+ARHGAP4chrX

153191215

-
intron-intronENST00000370028ENST00000370028ARHGAP4chrX

153191338

+ARHGAP4chrX

153191215

-
intron-intronENST00000370028ENST00000350060ARHGAP4chrX

153191338

+ARHGAP4chrX

153191215

-
intron-intronENST00000370028ENST00000370016ARHGAP4chrX

153191338

+ARHGAP4chrX

153191215

-
intron-intronENST00000370028ENST00000537206ARHGAP4chrX

153191338

+ARHGAP4chrX

153191215

-
intron-intronENST00000370028ENST00000467421ARHGAP4chrX

153191338

+ARHGAP4chrX

153191215

-
intron-intronENST00000350060ENST00000393721ARHGAP4chrX

153191338

+ARHGAP4chrX

153191215

-
intron-intronENST00000350060ENST00000370028ARHGAP4chrX

153191338

+ARHGAP4chrX

153191215

-
intron-intronENST00000350060ENST00000350060ARHGAP4chrX

153191338

+ARHGAP4chrX

153191215

-
intron-intronENST00000350060ENST00000370016ARHGAP4chrX

153191338

+ARHGAP4chrX

153191215

-
intron-intronENST00000350060ENST00000537206ARHGAP4chrX

153191338

+ARHGAP4chrX

153191215

-
intron-intronENST00000350060ENST00000467421ARHGAP4chrX

153191338

+ARHGAP4chrX

153191215

-
intron-intronENST00000370016ENST00000393721ARHGAP4chrX

153191338

+ARHGAP4chrX

153191215

-
intron-intronENST00000370016ENST00000370028ARHGAP4chrX

153191338

+ARHGAP4chrX

153191215

-
intron-intronENST00000370016ENST00000350060ARHGAP4chrX

153191338

+ARHGAP4chrX

153191215

-
intron-intronENST00000370016ENST00000370016ARHGAP4chrX

153191338

+ARHGAP4chrX

153191215

-
intron-intronENST00000370016ENST00000537206ARHGAP4chrX

153191338

+ARHGAP4chrX

153191215

-
intron-intronENST00000370016ENST00000467421ARHGAP4chrX

153191338

+ARHGAP4chrX

153191215

-
intron-intronENST00000537206ENST00000393721ARHGAP4chrX

153191338

+ARHGAP4chrX

153191215

-
intron-intronENST00000537206ENST00000370028ARHGAP4chrX

153191338

+ARHGAP4chrX

153191215

-
intron-intronENST00000537206ENST00000350060ARHGAP4chrX

153191338

+ARHGAP4chrX

153191215

-
intron-intronENST00000537206ENST00000370016ARHGAP4chrX

153191338

+ARHGAP4chrX

153191215

-
intron-intronENST00000537206ENST00000537206ARHGAP4chrX

153191338

+ARHGAP4chrX

153191215

-
intron-intronENST00000537206ENST00000467421ARHGAP4chrX

153191338

+ARHGAP4chrX

153191215

-
intron-intronENST00000467421ENST00000393721ARHGAP4chrX

153191338

+ARHGAP4chrX

153191215

-
intron-intronENST00000467421ENST00000370028ARHGAP4chrX

153191338

+ARHGAP4chrX

153191215

-
intron-intronENST00000467421ENST00000350060ARHGAP4chrX

153191338

+ARHGAP4chrX

153191215

-
intron-intronENST00000467421ENST00000370016ARHGAP4chrX

153191338

+ARHGAP4chrX

153191215

-
intron-intronENST00000467421ENST00000537206ARHGAP4chrX

153191338

+ARHGAP4chrX

153191215

-
intron-intronENST00000467421ENST00000467421ARHGAP4chrX

153191338

+ARHGAP4chrX

153191215

-
intron-intronENST00000393721ENST00000393721ARHGAP4chrX

153191341

+ARHGAP4chrX

153191215

-
intron-intronENST00000393721ENST00000370028ARHGAP4chrX

153191341

+ARHGAP4chrX

153191215

-
intron-intronENST00000393721ENST00000350060ARHGAP4chrX

153191341

+ARHGAP4chrX

153191215

-
intron-intronENST00000393721ENST00000370016ARHGAP4chrX

153191341

+ARHGAP4chrX

153191215

-
intron-intronENST00000393721ENST00000537206ARHGAP4chrX

153191341

+ARHGAP4chrX

153191215

-
intron-intronENST00000393721ENST00000467421ARHGAP4chrX

153191341

+ARHGAP4chrX

153191215

-
intron-intronENST00000370028ENST00000393721ARHGAP4chrX

153191341

+ARHGAP4chrX

153191215

-
intron-intronENST00000370028ENST00000370028ARHGAP4chrX

153191341

+ARHGAP4chrX

153191215

-
intron-intronENST00000370028ENST00000350060ARHGAP4chrX

153191341

+ARHGAP4chrX

153191215

-
intron-intronENST00000370028ENST00000370016ARHGAP4chrX

153191341

+ARHGAP4chrX

153191215

-
intron-intronENST00000370028ENST00000537206ARHGAP4chrX

153191341

+ARHGAP4chrX

153191215

-
intron-intronENST00000370028ENST00000467421ARHGAP4chrX

153191341

+ARHGAP4chrX

153191215

-
intron-intronENST00000350060ENST00000393721ARHGAP4chrX

153191341

+ARHGAP4chrX

153191215

-
intron-intronENST00000350060ENST00000370028ARHGAP4chrX

153191341

+ARHGAP4chrX

153191215

-
intron-intronENST00000350060ENST00000350060ARHGAP4chrX

153191341

+ARHGAP4chrX

153191215

-
intron-intronENST00000350060ENST00000370016ARHGAP4chrX

153191341

+ARHGAP4chrX

153191215

-
intron-intronENST00000350060ENST00000537206ARHGAP4chrX

153191341

+ARHGAP4chrX

153191215

-
intron-intronENST00000350060ENST00000467421ARHGAP4chrX

153191341

+ARHGAP4chrX

153191215

-
intron-intronENST00000370016ENST00000393721ARHGAP4chrX

153191341

+ARHGAP4chrX

153191215

-
intron-intronENST00000370016ENST00000370028ARHGAP4chrX

153191341

+ARHGAP4chrX

153191215

-
intron-intronENST00000370016ENST00000350060ARHGAP4chrX

153191341

+ARHGAP4chrX

153191215

-
intron-intronENST00000370016ENST00000370016ARHGAP4chrX

153191341

+ARHGAP4chrX

153191215

-
intron-intronENST00000370016ENST00000537206ARHGAP4chrX

153191341

+ARHGAP4chrX

153191215

-
intron-intronENST00000370016ENST00000467421ARHGAP4chrX

153191341

+ARHGAP4chrX

153191215

-
intron-intronENST00000537206ENST00000393721ARHGAP4chrX

153191341

+ARHGAP4chrX

153191215

-
intron-intronENST00000537206ENST00000370028ARHGAP4chrX

153191341

+ARHGAP4chrX

153191215

-
intron-intronENST00000537206ENST00000350060ARHGAP4chrX

153191341

+ARHGAP4chrX

153191215

-
intron-intronENST00000537206ENST00000370016ARHGAP4chrX

153191341

+ARHGAP4chrX

153191215

-
intron-intronENST00000537206ENST00000537206ARHGAP4chrX

153191341

+ARHGAP4chrX

153191215

-
intron-intronENST00000537206ENST00000467421ARHGAP4chrX

153191341

+ARHGAP4chrX

153191215

-
intron-intronENST00000467421ENST00000393721ARHGAP4chrX

153191341

+ARHGAP4chrX

153191215

-
intron-intronENST00000467421ENST00000370028ARHGAP4chrX

153191341

+ARHGAP4chrX

153191215

-
intron-intronENST00000467421ENST00000350060ARHGAP4chrX

153191341

+ARHGAP4chrX

153191215

-
intron-intronENST00000467421ENST00000370016ARHGAP4chrX

153191341

+ARHGAP4chrX

153191215

-
intron-intronENST00000467421ENST00000537206ARHGAP4chrX

153191341

+ARHGAP4chrX

153191215

-
intron-intronENST00000467421ENST00000467421ARHGAP4chrX

153191341

+ARHGAP4chrX

153191215

-
intron-intronENST00000393721ENST00000393721ARHGAP4chrX

153191215

+ARHGAP4chrX

153191338

-
intron-intronENST00000393721ENST00000370028ARHGAP4chrX

153191215

+ARHGAP4chrX

153191338

-
intron-intronENST00000393721ENST00000350060ARHGAP4chrX

153191215

+ARHGAP4chrX

153191338

-
intron-intronENST00000393721ENST00000370016ARHGAP4chrX

153191215

+ARHGAP4chrX

153191338

-
intron-intronENST00000393721ENST00000537206ARHGAP4chrX

153191215

+ARHGAP4chrX

153191338

-
intron-intronENST00000393721ENST00000467421ARHGAP4chrX

153191215

+ARHGAP4chrX

153191338

-
intron-intronENST00000370028ENST00000393721ARHGAP4chrX

153191215

+ARHGAP4chrX

153191338

-
intron-intronENST00000370028ENST00000370028ARHGAP4chrX

153191215

+ARHGAP4chrX

153191338

-
intron-intronENST00000370028ENST00000350060ARHGAP4chrX

153191215

+ARHGAP4chrX

153191338

-
intron-intronENST00000370028ENST00000370016ARHGAP4chrX

153191215

+ARHGAP4chrX

153191338

-
intron-intronENST00000370028ENST00000537206ARHGAP4chrX

153191215

+ARHGAP4chrX

153191338

-
intron-intronENST00000370028ENST00000467421ARHGAP4chrX

153191215

+ARHGAP4chrX

153191338

-
intron-intronENST00000350060ENST00000393721ARHGAP4chrX

153191215

+ARHGAP4chrX

153191338

-
intron-intronENST00000350060ENST00000370028ARHGAP4chrX

153191215

+ARHGAP4chrX

153191338

-
intron-intronENST00000350060ENST00000350060ARHGAP4chrX

153191215

+ARHGAP4chrX

153191338

-
intron-intronENST00000350060ENST00000370016ARHGAP4chrX

153191215

+ARHGAP4chrX

153191338

-
intron-intronENST00000350060ENST00000537206ARHGAP4chrX

153191215

+ARHGAP4chrX

153191338

-
intron-intronENST00000350060ENST00000467421ARHGAP4chrX

153191215

+ARHGAP4chrX

153191338

-
intron-intronENST00000370016ENST00000393721ARHGAP4chrX

153191215

+ARHGAP4chrX

153191338

-
intron-intronENST00000370016ENST00000370028ARHGAP4chrX

153191215

+ARHGAP4chrX

153191338

-
intron-intronENST00000370016ENST00000350060ARHGAP4chrX

153191215

+ARHGAP4chrX

153191338

-
intron-intronENST00000370016ENST00000370016ARHGAP4chrX

153191215

+ARHGAP4chrX

153191338

-
intron-intronENST00000370016ENST00000537206ARHGAP4chrX

153191215

+ARHGAP4chrX

153191338

-
intron-intronENST00000370016ENST00000467421ARHGAP4chrX

153191215

+ARHGAP4chrX

153191338

-
intron-intronENST00000537206ENST00000393721ARHGAP4chrX

153191215

+ARHGAP4chrX

153191338

-
intron-intronENST00000537206ENST00000370028ARHGAP4chrX

153191215

+ARHGAP4chrX

153191338

-
intron-intronENST00000537206ENST00000350060ARHGAP4chrX

153191215

+ARHGAP4chrX

153191338

-
intron-intronENST00000537206ENST00000370016ARHGAP4chrX

153191215

+ARHGAP4chrX

153191338

-
intron-intronENST00000537206ENST00000537206ARHGAP4chrX

153191215

+ARHGAP4chrX

153191338

-
intron-intronENST00000537206ENST00000467421ARHGAP4chrX

153191215

+ARHGAP4chrX

153191338

-
intron-intronENST00000467421ENST00000393721ARHGAP4chrX

153191215

+ARHGAP4chrX

153191338

-
intron-intronENST00000467421ENST00000370028ARHGAP4chrX

153191215

+ARHGAP4chrX

153191338

-
intron-intronENST00000467421ENST00000350060ARHGAP4chrX

153191215

+ARHGAP4chrX

153191338

-
intron-intronENST00000467421ENST00000370016ARHGAP4chrX

153191215

+ARHGAP4chrX

153191338

-
intron-intronENST00000467421ENST00000537206ARHGAP4chrX

153191215

+ARHGAP4chrX

153191338

-
intron-intronENST00000467421ENST00000467421ARHGAP4chrX

153191215

+ARHGAP4chrX

153191338

-

Top

FusionProtFeatures for ARHGAP4_ARHGAP4


check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
ARHGAP4

P98171

ARHGAP4

P98171

Inhibitory effect on stress fiber organization. Maydown-regulate Rho-like GTPase in hematopoietic cells. Inhibitory effect on stress fiber organization. Maydown-regulate Rho-like GTPase in hematopoietic cells.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page

.

* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note


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FusionGeneSequence for ARHGAP4_ARHGAP4


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences.
(nt: nucleotides, aa: amino acids)

* Fusion amino acid sequences.

* Fusion transcript sequences (only coding sequence (CDS) region).

* Fusion transcript sequences (Full-length transcript).

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FusionGenePPI for ARHGAP4_ARHGAP4


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page

.

check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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RelatedDrugs for ARHGAP4_ARHGAP4


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.0 2018-04-02)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for ARHGAP4_ARHGAP4


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource
HgeneARHGAP4C0019693HIV Infections1CTD_human
TgeneARHGAP4C0019693HIV Infections1CTD_human