FusionGDB Logo

Home

Download

Statistics

Examples

Help

Contact

Center for Computational Systems Medicine
leaf

FusionGeneSummary

leaf

FusionProtFeature

leaf

FusionGeneSequence

leaf

FusionGenePPI

leaf

RelatedDrugs

leaf

RelatedDiseases

Fusion gene ID: 24583

FusionGeneSummary for NOMO3_TFAP4

check button Fusion gene summary
Fusion gene informationFusion gene name: NOMO3_TFAP4
Fusion gene ID: 24583
HgeneTgene
Gene symbol

NOMO3

TFAP4

Gene ID

408050

7023

Gene nameNODAL modulator 3transcription factor AP-4
SynonymsNomoAP-4|bHLHc41
Cytomap

16p13.11

16p13.3

Type of geneprotein-codingprotein-coding
Descriptionnodal modulator 3pM5 protein 3pM5 protein, middle copytranscription factor AP-4activating enhancer-binding protein 4class C basic helix-loop-helix protein 41transcription factor AP-4 (activating enhancer binding protein 4)
Modification date2018052320180523
UniProtAcc

P69849

Q01664

Ensembl transtripts involved in fusion geneENST00000399336, ENST00000263012, 
ENST00000538468, ENST00000572932, 
ENST00000204517, 
Fusion gene scores* DoF score3 X 2 X 3=183 X 2 X 3=18
# samples 33
** MAII scorelog2(3/18*10)=0.736965594166206
effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs).
DoF>8 and MAII>0
log2(3/18*10)=0.736965594166206
effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs).
DoF>8 and MAII>0
Context

PubMed: NOMO3 [Title/Abstract] AND TFAP4 [Title/Abstract] AND fusion [Title/Abstract]

Functional or gene categories assigned by FusionGDB annotation
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
TgeneTFAP4

GO:0006978

DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator

18818310

TgeneTFAP4

GO:0043065

positive regulation of apoptotic process

18818310

TgeneTFAP4

GO:0043392

negative regulation of DNA binding

7933101|16540471

TgeneTFAP4

GO:0043922

negative regulation by host of viral transcription

14645924|16540471

TgeneTFAP4

GO:0043923

positive regulation by host of viral transcription

2833704

TgeneTFAP4

GO:0045736

negative regulation of cyclin-dependent protein serine/threonine kinase activity

18818310

TgeneTFAP4

GO:0045892

negative regulation of transcription, DNA-templated

9931457|16924111|19505873

TgeneTFAP4

GO:0065003

protein-containing complex assembly

19505873

TgeneTFAP4

GO:1901990

regulation of mitotic cell cycle phase transition

18818310


check button Fusion gene information from three resources
(ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018))
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
Data typeSourceCancer typeSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
TCGALDBRCATCGA-S3-AA0Z-01ANOMO3chr16

16350015

+TFAP4chr16

4312702

-
* LD: Li Ding group's fusion gene list
  RV: Roel Verhaak group's fusion gene list
  ChiTaRs fusion database

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
In-frameENST00000399336ENST00000204517NOMO3chr16

16350015

+TFAP4chr16

4312702

-
In-frameENST00000263012ENST00000204517NOMO3chr16

16350015

+TFAP4chr16

4312702

-
In-frameENST00000538468ENST00000204517NOMO3chr16

16350015

+TFAP4chr16

4312702

-
intron-3CDSENST00000572932ENST00000204517NOMO3chr16

16350015

+TFAP4chr16

4312702

-

Top

FusionProtFeatures for NOMO3_TFAP4


check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
NOMO3

P69849

TFAP4

Q01664

May antagonize Nodal signaling. {ECO:0000250}. Transcription factor that activates both viral andcellular genes by binding to the symmetrical DNA sequence 5'-CAGCTG-3'.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page

.

* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
>>>>>
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
TgeneTFAP4chr16:16350015chr16:4312702ENST00000204517-07193_22229339Compositional biasNote=Gln-rich
TgeneTFAP4chr16:16350015chr16:4312702ENST00000204517-07225_24429339Compositional biasNote=Pro-rich
TgeneTFAP4chr16:16350015chr16:4312702ENST00000204517-0748_9929339DomainbHLH
TgeneTFAP4chr16:16350015chr16:4312702ENST00000204517-07100_12029339RegionNote=Leucine-zipper 1
TgeneTFAP4chr16:16350015chr16:4312702ENST00000204517-07151_17929339RegionNote=Leucine-zipper 2

- In-frame and not-retained protein feature among the 13 regional features.
>>>
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneNOMO3chr16:16350015chr16:4312702ENST00000399336+11311177_12224061223Topological domainCytoplasmic
HgeneNOMO3chr16:16350015chr16:4312702ENST00000399336+113132_11554061223Topological domainExtracellular
HgeneNOMO3chr16:16350015chr16:4312702ENST00000399336+11311156_11764061223TransmembraneHelical


Top

FusionGeneSequence for NOMO3_TFAP4


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences.
(nt: nucleotides, aa: amino acids)

* Fusion amino acid sequences.
>In-frame_NOMO3_ENST00000399336_chr16_16350015_+_TFAP4_ENST00000204517_chr16_4312702_-_716aa
MLVGQGAGPLGPAVVTAAVVLLLSGVGPAHGSEDIVVGCGGFVKSDVEINYSLIEIKLYTKHGTLKYQTDCAPNNGYFMIPLYDKGDFIL
KIEPPLGWSFEPTTVELHVDGVSDICTKGGDINFVFTGFSVNGKVLSKGQPLGPAGVQVSLRNTGTEAKIQSTVTQPGGKFAFFKVLPGD
YEILATHPTWALKEASTTVRVTNSNANAASPLIVAGYNVSGSVRSDGEPMKGVKFLLFSSLVTKEDVLGCNVSPVPGFQPQDESLVYLCY
TVSREDGSFSFYSLPSGGYTVIPFYRGERITFDVAPSRLDFTVEHDSLKIEPVFHVMGFSVTGRVLNGPEGDGVPEAVVTLNNQIKVKTK
ADGSFRLENITTGTYTIHAQKEHLYFETVTIKIAPNTPQLADIVATGLANIPLTPETQRDQERRIRREIANSNERRRMQSINAGFQSLKT
LIPHTDGEKLSKAAILQQTAEYIFSLEQEKTRLLQQNTQLKRFIQELSGSSPKRRRAEDKDEGIGSPDIWEDEKAEDLRREMIELRQQLD
KERSVRMMLEEQVRSLEAHMYPEKLKVIAQQVQLQQQQEQVRLLHQEKLEREQQQLRTQLLPPPAPTHHPTVIVPAPPPPPSHHINVVTM

>In-frame_NOMO3_ENST00000263012_chr16_16350015_+_TFAP4_ENST00000204517_chr16_4312702_-_716aa
MLVGQGAGPLGPAVVTAAVVLLLSGVGPAHGSEDIVVGCGGFVKSDVEINYSLIEIKLYTKHGTLKYQTDCAPNNGYFMIPLYDKGDFIL
KIEPPLGWSFEPTTVELHVDGVSDICTKGGDINFVFTGFSVNGKVLSKGQPLGPAGVQVSLRNTGTEAKIQSTVTQPGGKFAFFKVLPGD
YEILATHPTWALKEASTTVRVTNSNANAASPLIVAGYNVSGSVRSDGEPMKGVKFLLFSSLVTKEDVLGCNVSPVPGFQPQDESLVYLCY
TVSREDGSFSFYSLPSGGYTVIPFYRGERITFDVAPSRLDFTVEHDSLKIEPVFHVMGFSVTGRVLNGPEGDGVPEAVVTLNNQIKVKTK
ADGSFRLENITTGTYTIHAQKEHLYFETVTIKIAPNTPQLADIVATGLANIPLTPETQRDQERRIRREIANSNERRRMQSINAGFQSLKT
LIPHTDGEKLSKAAILQQTAEYIFSLEQEKTRLLQQNTQLKRFIQELSGSSPKRRRAEDKDEGIGSPDIWEDEKAEDLRREMIELRQQLD
KERSVRMMLEEQVRSLEAHMYPEKLKVIAQQVQLQQQQEQVRLLHQEKLEREQQQLRTQLLPPPAPTHHPTVIVPAPPPPPSHHINVVTM

>In-frame_NOMO3_ENST00000538468_chr16_16350015_+_TFAP4_ENST00000204517_chr16_4312702_-_549aa
MARFAFFKVLPGDYEILATHPTWALKEASTTVRVTNSNANAASPLIVAGYNVSGSVRSDGEPMKGVKFLLFSSLVTKEDVLGCNVSPVPG
FQPQDESLVYLCYTVSREDGSFSFYSLPSGGYTVIPFYRGERITFDVAPSRLDFTVEHDSLKIEPVFHVMGFSVTGRVLNGPEGDGVPEA
VVTLNNQIKVKTKADGSFRLENITTGTYTIHAQKEHLYFETVTIKIAPNTPQLADIVATGLANIPLTPETQRDQERRIRREIANSNERRR
MQSINAGFQSLKTLIPHTDGEKLSKAAILQQTAEYIFSLEQEKTRLLQQNTQLKRFIQELSGSSPKRRRAEDKDEGIGSPDIWEDEKAED
LRREMIELRQQLDKERSVRMMLEEQVRSLEAHMYPEKLKVIAQQVQLQQQQEQVRLLHQEKLEREQQQLRTQLLPPPAPTHHPTVIVPAP
PPPPSHHINVVTMGPSSVINSVSTSRQNLDTIVQAIQHIEGTQEKQELEEEQRRAVIVKPVRSCPEAPTSDTASDSEASDSDAMDQSREE


* Fusion transcript sequences (only coding sequence (CDS) region).
>In-frame_NOMO3_ENST00000399336_chr16_16350015_+_TFAP4_ENST00000204517_chr16_4312702_-_2148nt
ATGCTGGTGGGCCAGGGCGCGGGGCCGCTGGGGCCCGCGGTGGTCACCGCCGCGGTGGTGCTGCTGCTGAGCGGCGTGGGGCCGGCGCAC
GGCTCGGAGGACATCGTGGTGGGCTGCGGTGGCTTCGTCAAGTCGGACGTGGAGATCAACTACTCTCTCATCGAGATAAAGCTGTACACC
AAGCATGGGACTTTGAAATACCAGACAGACTGTGCCCCTAATAATGGTTACTTTATGATCCCTTTGTATGATAAGGGGGATTTCATTCTG
AAGATTGAGCCTCCCCTAGGGTGGAGTTTTGAGCCGACGACCGTGGAGCTCCATGTGGATGGAGTCAGTGACATCTGCACAAAGGGTGGG
GACATCAACTTTGTCTTCACTGGGTTCTCTGTGAATGGCAAGGTCCTCAGCAAAGGGCAGCCCCTGGGTCCTGCGGGAGTTCAGGTGTCT
CTGAGAAACACTGGGACCGAAGCAAAGATCCAGTCCACAGTTACACAGCCTGGCGGAAAGTTTGCATTTTTTAAAGTTCTGCCTGGAGAT
TATGAAATCCTCGCAACTCATCCAACCTGGGCGTTGAAAGAGGCAAGCACCACAGTGCGTGTAACCAACTCCAATGCCAATGCGGCCAGT
CCCCTCATAGTTGCTGGCTACAATGTGTCTGGCTCTGTCCGAAGTGATGGGGAGCCCATGAAAGGCGTGAAGTTTCTTCTCTTTTCTTCT
TTAGTAACTAAAGAGGATGTCCTGGGCTGCAATGTCTCACCAGTGCCTGGGTTCCAGCCCCAAGACGAGAGTCTGGTGTATTTGTGCTAC
ACGGTCTCCAGAGAAGATGGCTCGTTCTCTTTCTATTCCTTGCCAAGTGGGGGCTACACTGTGATTCCGTTCTATCGAGGGGAGAGGATT
ACCTTTGATGTGGCGCCTTCCAGACTTGACTTCACAGTGGAGCATGACAGCTTGAAAATCGAGCCCGTGTTCCACGTCATGGGATTCTCC
GTCACCGGGAGGGTCTTGAACGGACCCGAAGGAGATGGTGTTCCAGAAGCAGTAGTCACCCTGAATAACCAAATCAAAGTTAAAACAAAA
GCTGATGGCTCATTCCGCCTTGAGAACATAACCACAGGGACATACACCATCCATGCTCAGAAAGAGCACCTCTACTTTGAAACGGTCACC
ATCAAAATTGCACCAAACACACCTCAGCTGGCTGACATTGTTGCAACAGGCCTTGCCAACATTCCACTAACCCCCGAGACTCAGCGGGAC
CAGGAGCGGCGGATTCGGCGGGAGATCGCCAACAGCAACGAGCGGAGACGCATGCAGAGCATCAACGCGGGATTCCAGTCCCTCAAGACC
CTCATCCCCCACACAGACGGAGAGAAGCTCAGCAAGGCAGCCATTCTCCAGCAGACAGCCGAGTACATCTTCTCCCTGGAGCAGGAGAAG
ACCAGGCTCTTGCAGCAGAACACACAGCTCAAGCGCTTCATCCAGGAGCTGAGCGGCTCGTCCCCCAAGCGACGGCGGGCAGAGGACAAG
GACGAAGGCATAGGCTCCCCGGACATCTGGGAGGACGAGAAGGCGGAGGACCTGCGGCGGGAGATGATTGAGCTGCGGCAGCAGCTGGAC
AAGGAGCGCTCGGTGCGCATGATGCTGGAGGAGCAGGTGCGCTCGCTGGAGGCCCACATGTACCCGGAAAAGCTCAAGGTGATTGCGCAG
CAGGTGCAGCTGCAGCAGCAGCAGGAACAGGTGAGGCTGCTGCACCAGGAGAAGCTGGAGCGGGAACAGCAGCAGCTGCGGACCCAGCTT
CTGCCCCCTCCGGCCCCCACCCACCACCCCACGGTGATCGTGCCAGCACCGCCTCCTCCTCCCTCCCACCACATCAATGTCGTCACCATG
GGCCCCTCCTCGGTCATCAACTCTGTTTCCACATCCCGGCAAAATCTGGACACCATCGTGCAGGCAATCCAGCACATCGAGGGCACCCAG
GAAAAGCAGGAGCTGGAGGAGGAGCAGCGGCGAGCTGTCATCGTGAAGCCTGTCCGCAGCTGCCCGGAGGCCCCCACCTCTGACACCGCC

>In-frame_NOMO3_ENST00000263012_chr16_16350015_+_TFAP4_ENST00000204517_chr16_4312702_-_2148nt
ATGCTGGTGGGCCAGGGCGCGGGGCCGCTGGGGCCCGCGGTGGTCACCGCCGCGGTGGTGCTGCTGCTGAGCGGCGTGGGGCCGGCGCAC
GGCTCGGAGGACATCGTGGTGGGCTGCGGTGGCTTCGTCAAGTCGGACGTGGAGATCAACTACTCTCTCATCGAGATAAAGCTGTACACC
AAGCATGGGACTTTGAAATACCAGACAGACTGTGCCCCTAATAATGGTTACTTTATGATCCCTTTGTATGATAAGGGGGATTTCATTCTG
AAGATTGAGCCTCCCCTAGGGTGGAGTTTTGAGCCGACGACCGTGGAGCTCCATGTGGATGGAGTCAGTGACATCTGCACAAAGGGTGGG
GACATCAACTTTGTCTTCACTGGGTTCTCTGTGAATGGCAAGGTCCTCAGCAAAGGGCAGCCCCTGGGTCCTGCGGGAGTTCAGGTGTCT
CTGAGAAACACTGGGACCGAAGCAAAGATCCAGTCCACAGTTACACAGCCTGGCGGAAAGTTTGCATTTTTTAAAGTTCTGCCTGGAGAT
TATGAAATCCTCGCAACTCATCCAACCTGGGCGTTGAAAGAGGCAAGCACCACAGTGCGTGTAACCAACTCCAATGCCAATGCGGCCAGT
CCCCTCATAGTTGCTGGCTACAATGTGTCTGGCTCTGTCCGAAGTGATGGGGAGCCCATGAAAGGCGTGAAGTTTCTTCTCTTTTCTTCT
TTAGTAACTAAAGAGGATGTCCTGGGCTGCAATGTCTCACCAGTGCCTGGGTTCCAGCCCCAAGACGAGAGTCTGGTGTATTTGTGCTAC
ACGGTCTCCAGAGAAGATGGCTCGTTCTCTTTCTATTCCTTGCCAAGTGGGGGCTACACTGTGATTCCGTTCTATCGAGGGGAGAGGATT
ACCTTTGATGTGGCGCCTTCCAGACTTGACTTCACAGTGGAGCATGACAGCTTGAAAATCGAGCCCGTGTTCCACGTCATGGGATTCTCC
GTCACCGGGAGGGTCTTGAACGGACCCGAAGGAGATGGTGTTCCAGAAGCAGTAGTCACCCTGAATAACCAAATCAAAGTTAAAACAAAA
GCTGATGGCTCATTCCGCCTTGAGAACATAACCACAGGGACATACACCATCCATGCTCAGAAAGAGCACCTCTACTTTGAAACGGTCACC
ATCAAAATTGCACCAAACACACCTCAGCTGGCTGACATTGTTGCAACAGGCCTTGCCAACATTCCACTAACCCCCGAGACTCAGCGGGAC
CAGGAGCGGCGGATTCGGCGGGAGATCGCCAACAGCAACGAGCGGAGACGCATGCAGAGCATCAACGCGGGATTCCAGTCCCTCAAGACC
CTCATCCCCCACACAGACGGAGAGAAGCTCAGCAAGGCAGCCATTCTCCAGCAGACAGCCGAGTACATCTTCTCCCTGGAGCAGGAGAAG
ACCAGGCTCTTGCAGCAGAACACACAGCTCAAGCGCTTCATCCAGGAGCTGAGCGGCTCGTCCCCCAAGCGACGGCGGGCAGAGGACAAG
GACGAAGGCATAGGCTCCCCGGACATCTGGGAGGACGAGAAGGCGGAGGACCTGCGGCGGGAGATGATTGAGCTGCGGCAGCAGCTGGAC
AAGGAGCGCTCGGTGCGCATGATGCTGGAGGAGCAGGTGCGCTCGCTGGAGGCCCACATGTACCCGGAAAAGCTCAAGGTGATTGCGCAG
CAGGTGCAGCTGCAGCAGCAGCAGGAACAGGTGAGGCTGCTGCACCAGGAGAAGCTGGAGCGGGAACAGCAGCAGCTGCGGACCCAGCTT
CTGCCCCCTCCGGCCCCCACCCACCACCCCACGGTGATCGTGCCAGCACCGCCTCCTCCTCCCTCCCACCACATCAATGTCGTCACCATG
GGCCCCTCCTCGGTCATCAACTCTGTTTCCACATCCCGGCAAAATCTGGACACCATCGTGCAGGCAATCCAGCACATCGAGGGCACCCAG
GAAAAGCAGGAGCTGGAGGAGGAGCAGCGGCGAGCTGTCATCGTGAAGCCTGTCCGCAGCTGCCCGGAGGCCCCCACCTCTGACACCGCC

>In-frame_NOMO3_ENST00000538468_chr16_16350015_+_TFAP4_ENST00000204517_chr16_4312702_-_1647nt
ATGGCAAGGTTTGCATTTTTTAAAGTTCTGCCTGGAGATTATGAAATCCTCGCAACTCATCCAACCTGGGCGTTGAAAGAGGCAAGCACC
ACAGTGCGTGTAACCAACTCCAATGCCAATGCGGCCAGTCCCCTCATAGTTGCTGGCTACAATGTGTCTGGCTCTGTCCGAAGTGATGGG
GAGCCCATGAAAGGCGTGAAGTTTCTTCTCTTTTCTTCTTTAGTAACTAAAGAGGATGTCCTGGGCTGCAATGTCTCACCAGTGCCTGGG
TTCCAGCCCCAAGACGAGAGTCTGGTGTATTTGTGCTACACGGTCTCCAGAGAAGATGGCTCGTTCTCTTTCTATTCCTTGCCAAGTGGG
GGCTACACTGTGATTCCGTTCTATCGAGGGGAGAGGATTACCTTTGATGTGGCGCCTTCCAGACTTGACTTCACAGTGGAGCATGACAGC
TTGAAAATCGAGCCCGTGTTCCACGTCATGGGATTCTCCGTCACCGGGAGGGTCTTGAACGGACCCGAAGGAGATGGTGTTCCAGAAGCA
GTAGTCACCCTGAATAACCAAATCAAAGTTAAAACAAAAGCTGATGGCTCATTCCGCCTTGAGAACATAACCACAGGGACATACACCATC
CATGCTCAGAAAGAGCACCTCTACTTTGAAACGGTCACCATCAAAATTGCACCAAACACACCTCAGCTGGCTGACATTGTTGCAACAGGC
CTTGCCAACATTCCACTAACCCCCGAGACTCAGCGGGACCAGGAGCGGCGGATTCGGCGGGAGATCGCCAACAGCAACGAGCGGAGACGC
ATGCAGAGCATCAACGCGGGATTCCAGTCCCTCAAGACCCTCATCCCCCACACAGACGGAGAGAAGCTCAGCAAGGCAGCCATTCTCCAG
CAGACAGCCGAGTACATCTTCTCCCTGGAGCAGGAGAAGACCAGGCTCTTGCAGCAGAACACACAGCTCAAGCGCTTCATCCAGGAGCTG
AGCGGCTCGTCCCCCAAGCGACGGCGGGCAGAGGACAAGGACGAAGGCATAGGCTCCCCGGACATCTGGGAGGACGAGAAGGCGGAGGAC
CTGCGGCGGGAGATGATTGAGCTGCGGCAGCAGCTGGACAAGGAGCGCTCGGTGCGCATGATGCTGGAGGAGCAGGTGCGCTCGCTGGAG
GCCCACATGTACCCGGAAAAGCTCAAGGTGATTGCGCAGCAGGTGCAGCTGCAGCAGCAGCAGGAACAGGTGAGGCTGCTGCACCAGGAG
AAGCTGGAGCGGGAACAGCAGCAGCTGCGGACCCAGCTTCTGCCCCCTCCGGCCCCCACCCACCACCCCACGGTGATCGTGCCAGCACCG
CCTCCTCCTCCCTCCCACCACATCAATGTCGTCACCATGGGCCCCTCCTCGGTCATCAACTCTGTTTCCACATCCCGGCAAAATCTGGAC
ACCATCGTGCAGGCAATCCAGCACATCGAGGGCACCCAGGAAAAGCAGGAGCTGGAGGAGGAGCAGCGGCGAGCTGTCATCGTGAAGCCT
GTCCGCAGCTGCCCGGAGGCCCCCACCTCTGACACCGCCTCCGACTCCGAGGCCTCAGACAGTGACGCCATGGACCAGAGCCGGGAGGAG


* Fusion transcript sequences (Full-length transcript).
>In-frame_NOMO3_ENST00000399336_chr16_16350015_+_TFAP4_ENST00000204517_chr16_4312702_-_3189nt
CTGGGGCTGTGACCGTGGGGTCGAAGCGCGCGTGCGCGGCGGCGGCTGGCGGCGGCGGTGGGGCGGGGCCTGGGCTGTCAGCCGGCCTAG
GAGGAGGAAGGAGCCTGCGGCGTGCAGTGTGAGGGGCGGGACCCGGCTGCCGGCGGTGGGTCTAGCTGGGGGAGGTCGGGCCATGCTGGT
GGGCCAGGGCGCGGGGCCGCTGGGGCCCGCGGTGGTCACCGCCGCGGTGGTGCTGCTGCTGAGCGGCGTGGGGCCGGCGCACGGCTCGGA
GGACATCGTGGTGGGCTGCGGTGGCTTCGTCAAGTCGGACGTGGAGATCAACTACTCTCTCATCGAGATAAAGCTGTACACCAAGCATGG
GACTTTGAAATACCAGACAGACTGTGCCCCTAATAATGGTTACTTTATGATCCCTTTGTATGATAAGGGGGATTTCATTCTGAAGATTGA
GCCTCCCCTAGGGTGGAGTTTTGAGCCGACGACCGTGGAGCTCCATGTGGATGGAGTCAGTGACATCTGCACAAAGGGTGGGGACATCAA
CTTTGTCTTCACTGGGTTCTCTGTGAATGGCAAGGTCCTCAGCAAAGGGCAGCCCCTGGGTCCTGCGGGAGTTCAGGTGTCTCTGAGAAA
CACTGGGACCGAAGCAAAGATCCAGTCCACAGTTACACAGCCTGGCGGAAAGTTTGCATTTTTTAAAGTTCTGCCTGGAGATTATGAAAT
CCTCGCAACTCATCCAACCTGGGCGTTGAAAGAGGCAAGCACCACAGTGCGTGTAACCAACTCCAATGCCAATGCGGCCAGTCCCCTCAT
AGTTGCTGGCTACAATGTGTCTGGCTCTGTCCGAAGTGATGGGGAGCCCATGAAAGGCGTGAAGTTTCTTCTCTTTTCTTCTTTAGTAAC
TAAAGAGGATGTCCTGGGCTGCAATGTCTCACCAGTGCCTGGGTTCCAGCCCCAAGACGAGAGTCTGGTGTATTTGTGCTACACGGTCTC
CAGAGAAGATGGCTCGTTCTCTTTCTATTCCTTGCCAAGTGGGGGCTACACTGTGATTCCGTTCTATCGAGGGGAGAGGATTACCTTTGA
TGTGGCGCCTTCCAGACTTGACTTCACAGTGGAGCATGACAGCTTGAAAATCGAGCCCGTGTTCCACGTCATGGGATTCTCCGTCACCGG
GAGGGTCTTGAACGGACCCGAAGGAGATGGTGTTCCAGAAGCAGTAGTCACCCTGAATAACCAAATCAAAGTTAAAACAAAAGCTGATGG
CTCATTCCGCCTTGAGAACATAACCACAGGGACATACACCATCCATGCTCAGAAAGAGCACCTCTACTTTGAAACGGTCACCATCAAAAT
TGCACCAAACACACCTCAGCTGGCTGACATTGTTGCAACAGGCCTTGCCAACATTCCACTAACCCCCGAGACTCAGCGGGACCAGGAGCG
GCGGATTCGGCGGGAGATCGCCAACAGCAACGAGCGGAGACGCATGCAGAGCATCAACGCGGGATTCCAGTCCCTCAAGACCCTCATCCC
CCACACAGACGGAGAGAAGCTCAGCAAGGCAGCCATTCTCCAGCAGACAGCCGAGTACATCTTCTCCCTGGAGCAGGAGAAGACCAGGCT
CTTGCAGCAGAACACACAGCTCAAGCGCTTCATCCAGGAGCTGAGCGGCTCGTCCCCCAAGCGACGGCGGGCAGAGGACAAGGACGAAGG
CATAGGCTCCCCGGACATCTGGGAGGACGAGAAGGCGGAGGACCTGCGGCGGGAGATGATTGAGCTGCGGCAGCAGCTGGACAAGGAGCG
CTCGGTGCGCATGATGCTGGAGGAGCAGGTGCGCTCGCTGGAGGCCCACATGTACCCGGAAAAGCTCAAGGTGATTGCGCAGCAGGTGCA
GCTGCAGCAGCAGCAGGAACAGGTGAGGCTGCTGCACCAGGAGAAGCTGGAGCGGGAACAGCAGCAGCTGCGGACCCAGCTTCTGCCCCC
TCCGGCCCCCACCCACCACCCCACGGTGATCGTGCCAGCACCGCCTCCTCCTCCCTCCCACCACATCAATGTCGTCACCATGGGCCCCTC
CTCGGTCATCAACTCTGTTTCCACATCCCGGCAAAATCTGGACACCATCGTGCAGGCAATCCAGCACATCGAGGGCACCCAGGAAAAGCA
GGAGCTGGAGGAGGAGCAGCGGCGAGCTGTCATCGTGAAGCCTGTCCGCAGCTGCCCGGAGGCCCCCACCTCTGACACCGCCTCCGACTC
CGAGGCCTCAGACAGTGACGCCATGGACCAGAGCCGGGAGGAGCCGTCGGGGGACGGGGAGCTTCCCTGACTACCCCCCCAGCCCTCCTC
TCCCTTCTGGGGGCTGGAGGGAGCCGGGGCAGCCACAGGGAGAGACATGGGCGAATGAGTGAGAAATTTTTACAAAATTACGATGTCATT
TGGGTCTCTTTTATGACCTCTTTTTCAATACTGTAAATCGACCTTTGAACGAAGCCACTCAACCCGAGGTCCCGGGGCTGGGGTGTCGCA
GAGCGTGTGGGAGCATCGGCACCCCAGGGCGGGGCCTCGGCCCCGGGGGCTGGAGGAAGCTGACACGGAGATGCCTGGCCTCTCTCTGCC
AAAAAGCATTTTTTCCTTTAAATATGTTTTTTAAGAACAGGGAAAATTAAACAAAACCCCAGGTTATTTCTTCCCTGCCCAGAGCCAGCC
TGGGATTGTCAGCCTTCAATCCCCTTTCCTTCCTCTTTTTGGGTTTTCTTCTTTCTCCTTTAAGCACTTACATGGTTGGGGGTAAGACTA
GGCTGGGGCATTCTGGGGGCCCGGAGGTCTCCGTTGCTTCTTGGTTGGGGTTTGCTGCTGCTGTGCCCCCCTCCCCCTTCCCCATCTCGG
CACTAGAATTCGCCACTCTCCCACCCCCCAGCCCCCACCTCTGCCTCCAGGTCTCATCTTCCACCCCAAAAATGTCTGTCTCTCTCTTTT
TGTTTTGTTTGTTGTTGGTTTTTTATTTCTTTTTGGTTTGCTTTCTGTTTTTGTTTTGTTTTTCTTTTTTTTCTTTCTTTTTTTTTTTTT
TTTACAATTTTGAGGTCTTCGTGTTCAAGGAGAAGCTATTATATTTTGTTAAGAAAGTGGGGAGAAAAAAACCAAGAGGCCACCGTGCCT

>In-frame_NOMO3_ENST00000263012_chr16_16350015_+_TFAP4_ENST00000204517_chr16_4312702_-_3083nt
GCGGCGTGCAGTGTGAGGGGCGGGACCCGGCTGCCGGCGGTGGGTCTAGCTGGGGGAGGTCGGGCCATGCTGGTGGGCCAGGGCGCGGGG
CCGCTGGGGCCCGCGGTGGTCACCGCCGCGGTGGTGCTGCTGCTGAGCGGCGTGGGGCCGGCGCACGGCTCGGAGGACATCGTGGTGGGC
TGCGGTGGCTTCGTCAAGTCGGACGTGGAGATCAACTACTCTCTCATCGAGATAAAGCTGTACACCAAGCATGGGACTTTGAAATACCAG
ACAGACTGTGCCCCTAATAATGGTTACTTTATGATCCCTTTGTATGATAAGGGGGATTTCATTCTGAAGATTGAGCCTCCCCTAGGGTGG
AGTTTTGAGCCGACGACCGTGGAGCTCCATGTGGATGGAGTCAGTGACATCTGCACAAAGGGTGGGGACATCAACTTTGTCTTCACTGGG
TTCTCTGTGAATGGCAAGGTCCTCAGCAAAGGGCAGCCCCTGGGTCCTGCGGGAGTTCAGGTGTCTCTGAGAAACACTGGGACCGAAGCA
AAGATCCAGTCCACAGTTACACAGCCTGGCGGAAAGTTTGCATTTTTTAAAGTTCTGCCTGGAGATTATGAAATCCTCGCAACTCATCCA
ACCTGGGCGTTGAAAGAGGCAAGCACCACAGTGCGTGTAACCAACTCCAATGCCAATGCGGCCAGTCCCCTCATAGTTGCTGGCTACAAT
GTGTCTGGCTCTGTCCGAAGTGATGGGGAGCCCATGAAAGGCGTGAAGTTTCTTCTCTTTTCTTCTTTAGTAACTAAAGAGGATGTCCTG
GGCTGCAATGTCTCACCAGTGCCTGGGTTCCAGCCCCAAGACGAGAGTCTGGTGTATTTGTGCTACACGGTCTCCAGAGAAGATGGCTCG
TTCTCTTTCTATTCCTTGCCAAGTGGGGGCTACACTGTGATTCCGTTCTATCGAGGGGAGAGGATTACCTTTGATGTGGCGCCTTCCAGA
CTTGACTTCACAGTGGAGCATGACAGCTTGAAAATCGAGCCCGTGTTCCACGTCATGGGATTCTCCGTCACCGGGAGGGTCTTGAACGGA
CCCGAAGGAGATGGTGTTCCAGAAGCAGTAGTCACCCTGAATAACCAAATCAAAGTTAAAACAAAAGCTGATGGCTCATTCCGCCTTGAG
AACATAACCACAGGGACATACACCATCCATGCTCAGAAAGAGCACCTCTACTTTGAAACGGTCACCATCAAAATTGCACCAAACACACCT
CAGCTGGCTGACATTGTTGCAACAGGCCTTGCCAACATTCCACTAACCCCCGAGACTCAGCGGGACCAGGAGCGGCGGATTCGGCGGGAG
ATCGCCAACAGCAACGAGCGGAGACGCATGCAGAGCATCAACGCGGGATTCCAGTCCCTCAAGACCCTCATCCCCCACACAGACGGAGAG
AAGCTCAGCAAGGCAGCCATTCTCCAGCAGACAGCCGAGTACATCTTCTCCCTGGAGCAGGAGAAGACCAGGCTCTTGCAGCAGAACACA
CAGCTCAAGCGCTTCATCCAGGAGCTGAGCGGCTCGTCCCCCAAGCGACGGCGGGCAGAGGACAAGGACGAAGGCATAGGCTCCCCGGAC
ATCTGGGAGGACGAGAAGGCGGAGGACCTGCGGCGGGAGATGATTGAGCTGCGGCAGCAGCTGGACAAGGAGCGCTCGGTGCGCATGATG
CTGGAGGAGCAGGTGCGCTCGCTGGAGGCCCACATGTACCCGGAAAAGCTCAAGGTGATTGCGCAGCAGGTGCAGCTGCAGCAGCAGCAG
GAACAGGTGAGGCTGCTGCACCAGGAGAAGCTGGAGCGGGAACAGCAGCAGCTGCGGACCCAGCTTCTGCCCCCTCCGGCCCCCACCCAC
CACCCCACGGTGATCGTGCCAGCACCGCCTCCTCCTCCCTCCCACCACATCAATGTCGTCACCATGGGCCCCTCCTCGGTCATCAACTCT
GTTTCCACATCCCGGCAAAATCTGGACACCATCGTGCAGGCAATCCAGCACATCGAGGGCACCCAGGAAAAGCAGGAGCTGGAGGAGGAG
CAGCGGCGAGCTGTCATCGTGAAGCCTGTCCGCAGCTGCCCGGAGGCCCCCACCTCTGACACCGCCTCCGACTCCGAGGCCTCAGACAGT
GACGCCATGGACCAGAGCCGGGAGGAGCCGTCGGGGGACGGGGAGCTTCCCTGACTACCCCCCCAGCCCTCCTCTCCCTTCTGGGGGCTG
GAGGGAGCCGGGGCAGCCACAGGGAGAGACATGGGCGAATGAGTGAGAAATTTTTACAAAATTACGATGTCATTTGGGTCTCTTTTATGA
CCTCTTTTTCAATACTGTAAATCGACCTTTGAACGAAGCCACTCAACCCGAGGTCCCGGGGCTGGGGTGTCGCAGAGCGTGTGGGAGCAT
CGGCACCCCAGGGCGGGGCCTCGGCCCCGGGGGCTGGAGGAAGCTGACACGGAGATGCCTGGCCTCTCTCTGCCAAAAAGCATTTTTTCC
TTTAAATATGTTTTTTAAGAACAGGGAAAATTAAACAAAACCCCAGGTTATTTCTTCCCTGCCCAGAGCCAGCCTGGGATTGTCAGCCTT
CAATCCCCTTTCCTTCCTCTTTTTGGGTTTTCTTCTTTCTCCTTTAAGCACTTACATGGTTGGGGGTAAGACTAGGCTGGGGCATTCTGG
GGGCCCGGAGGTCTCCGTTGCTTCTTGGTTGGGGTTTGCTGCTGCTGTGCCCCCCTCCCCCTTCCCCATCTCGGCACTAGAATTCGCCAC
TCTCCCACCCCCCAGCCCCCACCTCTGCCTCCAGGTCTCATCTTCCACCCCAAAAATGTCTGTCTCTCTCTTTTTGTTTTGTTTGTTGTT
GGTTTTTTATTTCTTTTTGGTTTGCTTTCTGTTTTTGTTTTGTTTTTCTTTTTTTTCTTTCTTTTTTTTTTTTTTTTACAATTTTGAGGT
CTTCGTGTTCAAGGAGAAGCTATTATATTTTGTTAAGAAAGTGGGGAGAAAAAAACCAAGAGGCCACCGTGCCTTTGTAAAGAAACAAAA

>In-frame_NOMO3_ENST00000538468_chr16_16350015_+_TFAP4_ENST00000204517_chr16_4312702_-_2944nt
GCCGGCGGTGGGTCTAGCTGGGGGAGGTCGGGCCATGCTGGTGGGCCAGGGCGCGGGGCCGCTGGGGCCCGCGGTGGTCACCGCCGCGGT
GGTGCTGCTGCTGAGCGGCGTGGGGCCGGCGCACGGCTCGGAGGACATCGTGGTGGGCTGCGGTGGCTTCGTCAAGTCGGACGTGGAGAT
CAACTACTCTCTCATCGAGATAAAGCTGTACACCAAGCATGGGACTTTGAAATACCAGACAGACTGTGCCCCTAATAATGGTTACTTTAT
GATCCCTTTGTATGATAAGGGGGATTTCATTCTGAAGATTGAGCCTCCCCTAGGGTGGAGTTTTGAGCCGACGACCGTGGAGCTCCATGT
GGATGGAGTCAGTGACATCTGCACAAAGGGTGGGGACATCAACTTTGTCTTCACTGGGTTCTCTGTGAATGGCAAGGTTTGCATTTTTTA
AAGTTCTGCCTGGAGATTATGAAATCCTCGCAACTCATCCAACCTGGGCGTTGAAAGAGGCAAGCACCACAGTGCGTGTAACCAACTCCA
ATGCCAATGCGGCCAGTCCCCTCATAGTTGCTGGCTACAATGTGTCTGGCTCTGTCCGAAGTGATGGGGAGCCCATGAAAGGCGTGAAGT
TTCTTCTCTTTTCTTCTTTAGTAACTAAAGAGGATGTCCTGGGCTGCAATGTCTCACCAGTGCCTGGGTTCCAGCCCCAAGACGAGAGTC
TGGTGTATTTGTGCTACACGGTCTCCAGAGAAGATGGCTCGTTCTCTTTCTATTCCTTGCCAAGTGGGGGCTACACTGTGATTCCGTTCT
ATCGAGGGGAGAGGATTACCTTTGATGTGGCGCCTTCCAGACTTGACTTCACAGTGGAGCATGACAGCTTGAAAATCGAGCCCGTGTTCC
ACGTCATGGGATTCTCCGTCACCGGGAGGGTCTTGAACGGACCCGAAGGAGATGGTGTTCCAGAAGCAGTAGTCACCCTGAATAACCAAA
TCAAAGTTAAAACAAAAGCTGATGGCTCATTCCGCCTTGAGAACATAACCACAGGGACATACACCATCCATGCTCAGAAAGAGCACCTCT
ACTTTGAAACGGTCACCATCAAAATTGCACCAAACACACCTCAGCTGGCTGACATTGTTGCAACAGGCCTTGCCAACATTCCACTAACCC
CCGAGACTCAGCGGGACCAGGAGCGGCGGATTCGGCGGGAGATCGCCAACAGCAACGAGCGGAGACGCATGCAGAGCATCAACGCGGGAT
TCCAGTCCCTCAAGACCCTCATCCCCCACACAGACGGAGAGAAGCTCAGCAAGGCAGCCATTCTCCAGCAGACAGCCGAGTACATCTTCT
CCCTGGAGCAGGAGAAGACCAGGCTCTTGCAGCAGAACACACAGCTCAAGCGCTTCATCCAGGAGCTGAGCGGCTCGTCCCCCAAGCGAC
GGCGGGCAGAGGACAAGGACGAAGGCATAGGCTCCCCGGACATCTGGGAGGACGAGAAGGCGGAGGACCTGCGGCGGGAGATGATTGAGC
TGCGGCAGCAGCTGGACAAGGAGCGCTCGGTGCGCATGATGCTGGAGGAGCAGGTGCGCTCGCTGGAGGCCCACATGTACCCGGAAAAGC
TCAAGGTGATTGCGCAGCAGGTGCAGCTGCAGCAGCAGCAGGAACAGGTGAGGCTGCTGCACCAGGAGAAGCTGGAGCGGGAACAGCAGC
AGCTGCGGACCCAGCTTCTGCCCCCTCCGGCCCCCACCCACCACCCCACGGTGATCGTGCCAGCACCGCCTCCTCCTCCCTCCCACCACA
TCAATGTCGTCACCATGGGCCCCTCCTCGGTCATCAACTCTGTTTCCACATCCCGGCAAAATCTGGACACCATCGTGCAGGCAATCCAGC
ACATCGAGGGCACCCAGGAAAAGCAGGAGCTGGAGGAGGAGCAGCGGCGAGCTGTCATCGTGAAGCCTGTCCGCAGCTGCCCGGAGGCCC
CCACCTCTGACACCGCCTCCGACTCCGAGGCCTCAGACAGTGACGCCATGGACCAGAGCCGGGAGGAGCCGTCGGGGGACGGGGAGCTTC
CCTGACTACCCCCCCAGCCCTCCTCTCCCTTCTGGGGGCTGGAGGGAGCCGGGGCAGCCACAGGGAGAGACATGGGCGAATGAGTGAGAA
ATTTTTACAAAATTACGATGTCATTTGGGTCTCTTTTATGACCTCTTTTTCAATACTGTAAATCGACCTTTGAACGAAGCCACTCAACCC
GAGGTCCCGGGGCTGGGGTGTCGCAGAGCGTGTGGGAGCATCGGCACCCCAGGGCGGGGCCTCGGCCCCGGGGGCTGGAGGAAGCTGACA
CGGAGATGCCTGGCCTCTCTCTGCCAAAAAGCATTTTTTCCTTTAAATATGTTTTTTAAGAACAGGGAAAATTAAACAAAACCCCAGGTT
ATTTCTTCCCTGCCCAGAGCCAGCCTGGGATTGTCAGCCTTCAATCCCCTTTCCTTCCTCTTTTTGGGTTTTCTTCTTTCTCCTTTAAGC
ACTTACATGGTTGGGGGTAAGACTAGGCTGGGGCATTCTGGGGGCCCGGAGGTCTCCGTTGCTTCTTGGTTGGGGTTTGCTGCTGCTGTG
CCCCCCTCCCCCTTCCCCATCTCGGCACTAGAATTCGCCACTCTCCCACCCCCCAGCCCCCACCTCTGCCTCCAGGTCTCATCTTCCACC
CCAAAAATGTCTGTCTCTCTCTTTTTGTTTTGTTTGTTGTTGGTTTTTTATTTCTTTTTGGTTTGCTTTCTGTTTTTGTTTTGTTTTTCT
TTTTTTTCTTTCTTTTTTTTTTTTTTTTACAATTTTGAGGTCTTCGTGTTCAAGGAGAAGCTATTATATTTTGTTAAGAAAGTGGGGAGA


Top

FusionGenePPI for NOMO3_TFAP4


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page

.

check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors
NOMO3RYK, UBQLN4, LIG4, FBXO6, TMEM25, EWSR1, FPR2, TPCN2TFAP4FBXW11, ELAVL1, CLOCK, USF2, NFATC2, TFCP2, GTF2I, UBP1, NR2F1, NR2F2, NFIC, NR2F6, PKNOX1, SP1, NFIA, BRCA1, ZHX3, ZBTB7B, SP3, ESRRA, APEX1, TERF2IP, HMGB3, TOPBP1, MDC1, HMGB2, POLE2, HMGB1, PCNA, PARP2, TERF2, RAD50, ZBTB7A, CTBP1, WIZ, CTCF, TFCP2L1, SIN3B, MBD2, SMARCB1, ARID1A, SMARCC2, SMARCE1, ARID2, EHMT1, EHMT2, SAP130, HDAC1, HDAC2, TTF2, BTAF1, DNTTIP1, VRK1, ZNF462, BRD7, C4orf27, CHRAC1, YEATS2, ZZZ3, S100A8, ELMSAN1, ZNF335, UHRF2, PRDM16, INO80E, PPP6R3, RAN, THYN1, CABIN1, CKAP5, NAV3, NGEF, DDX39B, MTA3, SOGA3, HMGB1P10, TP53, SRP54, XRCC5, BTRC, SKP1, CUL1, GOLGA2, TRAF1, EXOSC8, NEU2, SNRNP200, BPTF, PDE9A, RBPJ, FOXA1, FOXE1, FOXK2, ADAMTS4, ANGPTL7, HIRA, OBFC1, UBN2, TRIB2, CTC1, FOXK1, WDR45B, ARRB2, KCTD2, ATF1, SIN3A, GNB4


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


Top

RelatedDrugs for NOMO3_TFAP4


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.0 2018-04-02)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

Top

RelatedDiseases for NOMO3_TFAP4


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource