FusionGDB Logo

Home

Download

Statistics

Examples

Help

Contact

Center for Computational Systems Medicine
leaf

FusionGeneSummary

leaf

FusionProtFeature

leaf

FusionGeneSequence

leaf

FusionGenePPI

leaf

RelatedDrugs

leaf

RelatedDiseases

Fusion gene ID: 24376

FusionGeneSummary for NIPAL2_RGS22

check button Fusion gene summary
Fusion gene informationFusion gene name: NIPAL2_RGS22
Fusion gene ID: 24376
HgeneTgene
Gene symbol

NIPAL2

RGS22

Gene ID

79815

26166

Gene nameNIPA like domain containing 2regulator of G protein signaling 22
SynonymsNPAL2CT145|PRTD-NY2
Cytomap

8q22.2

8q22.2

Type of geneprotein-codingprotein-coding
DescriptionNIPA-like protein 2regulator of G-protein signaling 22
Modification date2018052320180403
UniProtAcc

Q9H841

Q8NE09

Ensembl transtripts involved in fusion geneENST00000430223, ENST00000341166, 
ENST00000520545, 
ENST00000360863, 
ENST00000523287, ENST00000523437, 
ENST00000519421, 
Fusion gene scores* DoF score4 X 3 X 4=486 X 5 X 5=150
# samples 46
** MAII scorelog2(4/48*10)=-0.263034405833794
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
log2(6/150*10)=-1.32192809488736
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: NIPAL2 [Title/Abstract] AND RGS22 [Title/Abstract] AND fusion [Title/Abstract]

Functional or gene categories assigned by FusionGDB annotation
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID

check button Fusion gene information from three resources
(ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018))
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
Data typeSourceCancer typeSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
TCGARVSTADTCGA-VQ-A8DZ-01ANIPAL2chr8

99306231

-RGS22chr8

100977658

-
* LD: Li Ding group's fusion gene list
  RV: Roel Verhaak group's fusion gene list
  ChiTaRs fusion database

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
In-frameENST00000430223ENST00000360863NIPAL2chr8

99306231

-RGS22chr8

100977658

-
In-frameENST00000430223ENST00000523287NIPAL2chr8

99306231

-RGS22chr8

100977658

-
In-frameENST00000430223ENST00000523437NIPAL2chr8

99306231

-RGS22chr8

100977658

-
5CDS-intronENST00000430223ENST00000519421NIPAL2chr8

99306231

-RGS22chr8

100977658

-
In-frameENST00000341166ENST00000360863NIPAL2chr8

99306231

-RGS22chr8

100977658

-
In-frameENST00000341166ENST00000523287NIPAL2chr8

99306231

-RGS22chr8

100977658

-
In-frameENST00000341166ENST00000523437NIPAL2chr8

99306231

-RGS22chr8

100977658

-
5CDS-intronENST00000341166ENST00000519421NIPAL2chr8

99306231

-RGS22chr8

100977658

-
intron-3CDSENST00000520545ENST00000360863NIPAL2chr8

99306231

-RGS22chr8

100977658

-
intron-3CDSENST00000520545ENST00000523287NIPAL2chr8

99306231

-RGS22chr8

100977658

-
intron-3CDSENST00000520545ENST00000523437NIPAL2chr8

99306231

-RGS22chr8

100977658

-
intron-intronENST00000520545ENST00000519421NIPAL2chr8

99306231

-RGS22chr8

100977658

-

Top

FusionProtFeatures for NIPAL2_RGS22


check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
NIPAL2

Q9H841

RGS22

Q8NE09

Inhibits signal transduction by increasing the GTPaseactivity of G protein alpha subunits thereby driving them intotheir inactive GDP-bound form. {ECO:0000250}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page

.

* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note

- In-frame and not-retained protein feature among the 13 regional features.
>>>>>>>>>
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneNIPAL2chr8:99306231chr8:100977658ENST00000341166-112110_13045369TransmembraneHelical
HgeneNIPAL2chr8:99306231chr8:100977658ENST00000341166-112144_16445369TransmembraneHelical
HgeneNIPAL2chr8:99306231chr8:100977658ENST00000341166-112177_19745369TransmembraneHelical
HgeneNIPAL2chr8:99306231chr8:100977658ENST00000341166-112209_22945369TransmembraneHelical
HgeneNIPAL2chr8:99306231chr8:100977658ENST00000341166-112243_26345369TransmembraneHelical
HgeneNIPAL2chr8:99306231chr8:100977658ENST00000341166-112278_29845369TransmembraneHelical
HgeneNIPAL2chr8:99306231chr8:100977658ENST00000341166-112306_32645369TransmembraneHelical
HgeneNIPAL2chr8:99306231chr8:100977658ENST00000341166-11246_6645369TransmembraneHelical
HgeneNIPAL2chr8:99306231chr8:100977658ENST00000341166-11288_10845369TransmembraneHelical
TgeneRGS22chr8:99306231chr8:100977658ENST00000360863-22281142_117411731285Coiled coilOntology_term=ECO:0000255
TgeneRGS22chr8:99306231chr8:100977658ENST00000360863-2228267_27711731285Compositional biasNote=Poly-Glu
TgeneRGS22chr8:99306231chr8:100977658ENST00000360863-2228767_77111731285Compositional biasNote=Poly-Leu
TgeneRGS22chr8:99306231chr8:100977658ENST00000360863-22281021_114511731285DomainRGS 2
TgeneRGS22chr8:99306231chr8:100977658ENST00000360863-2228852_98011731285DomainRGS 1


Top

FusionGeneSequence for NIPAL2_RGS22


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences.
(nt: nucleotides, aa: amino acids)

* Fusion amino acid sequences.
>In-frame_NIPAL2_ENST00000430223_chr8_99306231_-_RGS22_ENST00000360863_chr8_100977658_-_137aa
MAAVAPAGPGDSASAALDELSLNFTYGAPGAGNGSLSGDWYRRNQDGIKQYANTSVPAIKTALLSDSFLGLQPYGRQPTWCYSKYIEALE

>In-frame_NIPAL2_ENST00000430223_chr8_99306231_-_RGS22_ENST00000523287_chr8_100977658_-_137aa
MAAVAPAGPGDSASAALDELSLNFTYGAPGAGNGSLSGDWYRRNQDGIKQYANTSVPAIKTALLSDSFLGLQPYGRQPTWCYSKYIEALE

>In-frame_NIPAL2_ENST00000430223_chr8_99306231_-_RGS22_ENST00000523437_chr8_100977658_-_137aa
MAAVAPAGPGDSASAALDELSLNFTYGAPGAGNGSLSGDWYRRNQDGIKQYANTSVPAIKTALLSDSFLGLQPYGRQPTWCYSKYIEALE

>In-frame_NIPAL2_ENST00000341166_chr8_99306231_-_RGS22_ENST00000360863_chr8_100977658_-_137aa
MAAVAPAGPGDSASAALDELSLNFTYGAPGAGNGSLSGDWYRRNQDGIKQYANTSVPAIKTALLSDSFLGLQPYGRQPTWCYSKYIEALE

>In-frame_NIPAL2_ENST00000341166_chr8_99306231_-_RGS22_ENST00000523287_chr8_100977658_-_137aa
MAAVAPAGPGDSASAALDELSLNFTYGAPGAGNGSLSGDWYRRNQDGIKQYANTSVPAIKTALLSDSFLGLQPYGRQPTWCYSKYIEALE

>In-frame_NIPAL2_ENST00000341166_chr8_99306231_-_RGS22_ENST00000523437_chr8_100977658_-_137aa
MAAVAPAGPGDSASAALDELSLNFTYGAPGAGNGSLSGDWYRRNQDGIKQYANTSVPAIKTALLSDSFLGLQPYGRQPTWCYSKYIEALE


* Fusion transcript sequences (only coding sequence (CDS) region).
>In-frame_NIPAL2_ENST00000430223_chr8_99306231_-_RGS22_ENST00000360863_chr8_100977658_-_411nt
ATGGCAGCGGTGGCGCCCGCGGGCCCCGGGGACTCCGCCTCGGCCGCCCTGGACGAGCTGTCACTGAATTTCACGTACGGGGCACCAGGC
GCCGGCAACGGCTCCCTCTCGGGCGACTGGTACCGCAGGAACCAGGATGGAATCAAACAATATGCAAATACTTCAGTGCCTGCTATCAAA
ACTGCTTTACTCAGTGATTCCTTCCTAGGCCTCCAACCATATGGCCGACAGCCAACCTGGTGCTACTCAAAGTATATAGAAGCCTTAGAA
CAGGAGAGAATTCTTCTTAAGATCCAAGAAGAACTAGAAAAAAAGTTGTTTGCAGGCTTGCAACCTCTCACAAATTTTAAGGCTAGCTCT

>In-frame_NIPAL2_ENST00000430223_chr8_99306231_-_RGS22_ENST00000523287_chr8_100977658_-_411nt
ATGGCAGCGGTGGCGCCCGCGGGCCCCGGGGACTCCGCCTCGGCCGCCCTGGACGAGCTGTCACTGAATTTCACGTACGGGGCACCAGGC
GCCGGCAACGGCTCCCTCTCGGGCGACTGGTACCGCAGGAACCAGGATGGAATCAAACAATATGCAAATACTTCAGTGCCTGCTATCAAA
ACTGCTTTACTCAGTGATTCCTTCCTAGGCCTCCAACCATATGGCCGACAGCCAACCTGGTGCTACTCAAAGTATATAGAAGCCTTAGAA
CAGGAGAGAATTCTTCTTAAGATCCAAGAAGAACTAGAAAAAAAGTTGTTTGCAGGCTTGCAACCTCTCACAAATTTTAAGGCTAGCTCT

>In-frame_NIPAL2_ENST00000430223_chr8_99306231_-_RGS22_ENST00000523437_chr8_100977658_-_411nt
ATGGCAGCGGTGGCGCCCGCGGGCCCCGGGGACTCCGCCTCGGCCGCCCTGGACGAGCTGTCACTGAATTTCACGTACGGGGCACCAGGC
GCCGGCAACGGCTCCCTCTCGGGCGACTGGTACCGCAGGAACCAGGATGGAATCAAACAATATGCAAATACTTCAGTGCCTGCTATCAAA
ACTGCTTTACTCAGTGATTCCTTCCTAGGCCTCCAACCATATGGCCGACAGCCAACCTGGTGCTACTCAAAGTATATAGAAGCCTTAGAA
CAGGAGAGAATTCTTCTTAAGATCCAAGAAGAACTAGAAAAAAAGTTGTTTGCAGGCTTGCAACCTCTCACAAATTTTAAGGCTAGCTCT

>In-frame_NIPAL2_ENST00000341166_chr8_99306231_-_RGS22_ENST00000360863_chr8_100977658_-_411nt
ATGGCAGCGGTGGCGCCCGCGGGCCCCGGGGACTCCGCCTCGGCCGCCCTGGACGAGCTGTCACTGAATTTCACGTACGGGGCACCAGGC
GCCGGCAACGGCTCCCTCTCGGGCGACTGGTACCGCAGGAACCAGGATGGAATCAAACAATATGCAAATACTTCAGTGCCTGCTATCAAA
ACTGCTTTACTCAGTGATTCCTTCCTAGGCCTCCAACCATATGGCCGACAGCCAACCTGGTGCTACTCAAAGTATATAGAAGCCTTAGAA
CAGGAGAGAATTCTTCTTAAGATCCAAGAAGAACTAGAAAAAAAGTTGTTTGCAGGCTTGCAACCTCTCACAAATTTTAAGGCTAGCTCT

>In-frame_NIPAL2_ENST00000341166_chr8_99306231_-_RGS22_ENST00000523287_chr8_100977658_-_411nt
ATGGCAGCGGTGGCGCCCGCGGGCCCCGGGGACTCCGCCTCGGCCGCCCTGGACGAGCTGTCACTGAATTTCACGTACGGGGCACCAGGC
GCCGGCAACGGCTCCCTCTCGGGCGACTGGTACCGCAGGAACCAGGATGGAATCAAACAATATGCAAATACTTCAGTGCCTGCTATCAAA
ACTGCTTTACTCAGTGATTCCTTCCTAGGCCTCCAACCATATGGCCGACAGCCAACCTGGTGCTACTCAAAGTATATAGAAGCCTTAGAA
CAGGAGAGAATTCTTCTTAAGATCCAAGAAGAACTAGAAAAAAAGTTGTTTGCAGGCTTGCAACCTCTCACAAATTTTAAGGCTAGCTCT

>In-frame_NIPAL2_ENST00000341166_chr8_99306231_-_RGS22_ENST00000523437_chr8_100977658_-_411nt
ATGGCAGCGGTGGCGCCCGCGGGCCCCGGGGACTCCGCCTCGGCCGCCCTGGACGAGCTGTCACTGAATTTCACGTACGGGGCACCAGGC
GCCGGCAACGGCTCCCTCTCGGGCGACTGGTACCGCAGGAACCAGGATGGAATCAAACAATATGCAAATACTTCAGTGCCTGCTATCAAA
ACTGCTTTACTCAGTGATTCCTTCCTAGGCCTCCAACCATATGGCCGACAGCCAACCTGGTGCTACTCAAAGTATATAGAAGCCTTAGAA
CAGGAGAGAATTCTTCTTAAGATCCAAGAAGAACTAGAAAAAAAGTTGTTTGCAGGCTTGCAACCTCTCACAAATTTTAAGGCTAGCTCT


* Fusion transcript sequences (Full-length transcript).
>In-frame_NIPAL2_ENST00000430223_chr8_99306231_-_RGS22_ENST00000360863_chr8_100977658_-_916nt
GGAGGAGGAGAGGAGGCAGCGCCCGGCCAGGCTGGGAGCACCTACGGCCGCGCGGGGGCGGGAGCCAGGTGGCCTCGGCGCGCCCGCCTC
GCCCGGGCACCGAGCAGGAAGTGGCTGCGGCGCGGCCTCCTCGCGGTGCAACAGGGCGGGGAGGCGGCCGCAGCCCGAGCCGGAGCCCGA
GCGCCGGGAGCGAGACCTCATGGCAGCGGTGGCGCCCGCGGGCCCCGGGGACTCCGCCTCGGCCGCCCTGGACGAGCTGTCACTGAATTT
CACGTACGGGGCACCAGGCGCCGGCAACGGCTCCCTCTCGGGCGACTGGTACCGCAGGAACCAGGATGGAATCAAACAATATGCAAATAC
TTCAGTGCCTGCTATCAAAACTGCTTTACTCAGTGATTCCTTCCTAGGCCTCCAACCATATGGCCGACAGCCAACCTGGTGCTACTCAAA
GTATATAGAAGCCTTAGAACAGGAGAGAATTCTTCTTAAGATCCAAGAAGAACTAGAAAAAAAGTTGTTTGCAGGCTTGCAACCTCTCAC
AAATTTTAAGGCTAGCTCTTCAACTATGTCTTTGAAAAAGAATATGTCTGCCCACAGCAGCCAGAAGTGACAGCATTCTTGTGAATGTTT
ACATCCTGCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTGTTTTTTTGAAGGTCTGT
ATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGATTTTCCAGGTGGGAAATAAATAAAGAAAATTTGGCTTGTCTTACTCTCG
CAGTTTTAAAATTATAGCTATTCTGTACACATGACATACAAGACTATAAGAACTGTTTAACTTATTTAGAATAAAACAACTACTATCTAG

>In-frame_NIPAL2_ENST00000430223_chr8_99306231_-_RGS22_ENST00000523287_chr8_100977658_-_801nt
GGAGGAGGAGAGGAGGCAGCGCCCGGCCAGGCTGGGAGCACCTACGGCCGCGCGGGGGCGGGAGCCAGGTGGCCTCGGCGCGCCCGCCTC
GCCCGGGCACCGAGCAGGAAGTGGCTGCGGCGCGGCCTCCTCGCGGTGCAACAGGGCGGGGAGGCGGCCGCAGCCCGAGCCGGAGCCCGA
GCGCCGGGAGCGAGACCTCATGGCAGCGGTGGCGCCCGCGGGCCCCGGGGACTCCGCCTCGGCCGCCCTGGACGAGCTGTCACTGAATTT
CACGTACGGGGCACCAGGCGCCGGCAACGGCTCCCTCTCGGGCGACTGGTACCGCAGGAACCAGGATGGAATCAAACAATATGCAAATAC
TTCAGTGCCTGCTATCAAAACTGCTTTACTCAGTGATTCCTTCCTAGGCCTCCAACCATATGGCCGACAGCCAACCTGGTGCTACTCAAA
GTATATAGAAGCCTTAGAACAGGAGAGAATTCTTCTTAAGATCCAAGAAGAACTAGAAAAAAAGTTGTTTGCAGGCTTGCAACCTCTCAC
AAATTTTAAGGCTAGCTCTTCAACTATGTCTTTGAAAAAGAATATGTCTGCCCACAGCAGCCAGAAGTGACAGCATTCTTGTGAATGTTT
ACATCCTGCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTGTTTTTTTGAAGGTCTGT

>In-frame_NIPAL2_ENST00000430223_chr8_99306231_-_RGS22_ENST00000523437_chr8_100977658_-_785nt
GGAGGAGGAGAGGAGGCAGCGCCCGGCCAGGCTGGGAGCACCTACGGCCGCGCGGGGGCGGGAGCCAGGTGGCCTCGGCGCGCCCGCCTC
GCCCGGGCACCGAGCAGGAAGTGGCTGCGGCGCGGCCTCCTCGCGGTGCAACAGGGCGGGGAGGCGGCCGCAGCCCGAGCCGGAGCCCGA
GCGCCGGGAGCGAGACCTCATGGCAGCGGTGGCGCCCGCGGGCCCCGGGGACTCCGCCTCGGCCGCCCTGGACGAGCTGTCACTGAATTT
CACGTACGGGGCACCAGGCGCCGGCAACGGCTCCCTCTCGGGCGACTGGTACCGCAGGAACCAGGATGGAATCAAACAATATGCAAATAC
TTCAGTGCCTGCTATCAAAACTGCTTTACTCAGTGATTCCTTCCTAGGCCTCCAACCATATGGCCGACAGCCAACCTGGTGCTACTCAAA
GTATATAGAAGCCTTAGAACAGGAGAGAATTCTTCTTAAGATCCAAGAAGAACTAGAAAAAAAGTTGTTTGCAGGCTTGCAACCTCTCAC
AAATTTTAAGGCTAGCTCTTCAACTATGTCTTTGAAAAAGAATATGTCTGCCCACAGCAGCCAGAAGTGACAGCATTCTTGTGAATGTTT
ACATCCTGCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTGTTTTTTTGAAGGTCTGT

>In-frame_NIPAL2_ENST00000341166_chr8_99306231_-_RGS22_ENST00000360863_chr8_100977658_-_973nt
AGCTGGACGGCCCCGGGAGGCCGCAGACCGCCGGGCTCCCCGAGGACACCTCGCACCGGAGGAGGAGAGGAGGCAGCGCCCGGCCAGGCT
GGGAGCACCTACGGCCGCGCGGGGGCGGGAGCCAGGTGGCCTCGGCGCGCCCGCCTCGCCCGGGCACCGAGCAGGAAGTGGCTGCGGCGC
GGCCTCCTCGCGGTGCAACAGGGCGGGGAGGCGGCCGCAGCCCGAGCCGGAGCCCGAGCGCCGGGAGCGAGACCTCATGGCAGCGGTGGC
GCCCGCGGGCCCCGGGGACTCCGCCTCGGCCGCCCTGGACGAGCTGTCACTGAATTTCACGTACGGGGCACCAGGCGCCGGCAACGGCTC
CCTCTCGGGCGACTGGTACCGCAGGAACCAGGATGGAATCAAACAATATGCAAATACTTCAGTGCCTGCTATCAAAACTGCTTTACTCAG
TGATTCCTTCCTAGGCCTCCAACCATATGGCCGACAGCCAACCTGGTGCTACTCAAAGTATATAGAAGCCTTAGAACAGGAGAGAATTCT
TCTTAAGATCCAAGAAGAACTAGAAAAAAAGTTGTTTGCAGGCTTGCAACCTCTCACAAATTTTAAGGCTAGCTCTTCAACTATGTCTTT
GAAAAAGAATATGTCTGCCCACAGCAGCCAGAAGTGACAGCATTCTTGTGAATGTTTACATCCTGCTGCTGATAGGTTCAAGGAATTCTT
TAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTGTTTTTTTGAAGGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTG
ATTCTGGATTTTCCAGGTGGGAAATAAATAAAGAAAATTTGGCTTGTCTTACTCTCGCAGTTTTAAAATTATAGCTATTCTGTACACATG

>In-frame_NIPAL2_ENST00000341166_chr8_99306231_-_RGS22_ENST00000523287_chr8_100977658_-_858nt
AGCTGGACGGCCCCGGGAGGCCGCAGACCGCCGGGCTCCCCGAGGACACCTCGCACCGGAGGAGGAGAGGAGGCAGCGCCCGGCCAGGCT
GGGAGCACCTACGGCCGCGCGGGGGCGGGAGCCAGGTGGCCTCGGCGCGCCCGCCTCGCCCGGGCACCGAGCAGGAAGTGGCTGCGGCGC
GGCCTCCTCGCGGTGCAACAGGGCGGGGAGGCGGCCGCAGCCCGAGCCGGAGCCCGAGCGCCGGGAGCGAGACCTCATGGCAGCGGTGGC
GCCCGCGGGCCCCGGGGACTCCGCCTCGGCCGCCCTGGACGAGCTGTCACTGAATTTCACGTACGGGGCACCAGGCGCCGGCAACGGCTC
CCTCTCGGGCGACTGGTACCGCAGGAACCAGGATGGAATCAAACAATATGCAAATACTTCAGTGCCTGCTATCAAAACTGCTTTACTCAG
TGATTCCTTCCTAGGCCTCCAACCATATGGCCGACAGCCAACCTGGTGCTACTCAAAGTATATAGAAGCCTTAGAACAGGAGAGAATTCT
TCTTAAGATCCAAGAAGAACTAGAAAAAAAGTTGTTTGCAGGCTTGCAACCTCTCACAAATTTTAAGGCTAGCTCTTCAACTATGTCTTT
GAAAAAGAATATGTCTGCCCACAGCAGCCAGAAGTGACAGCATTCTTGTGAATGTTTACATCCTGCTGCTGATAGGTTCAAGGAATTCTT
TAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTGTTTTTTTGAAGGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTG

>In-frame_NIPAL2_ENST00000341166_chr8_99306231_-_RGS22_ENST00000523437_chr8_100977658_-_842nt
AGCTGGACGGCCCCGGGAGGCCGCAGACCGCCGGGCTCCCCGAGGACACCTCGCACCGGAGGAGGAGAGGAGGCAGCGCCCGGCCAGGCT
GGGAGCACCTACGGCCGCGCGGGGGCGGGAGCCAGGTGGCCTCGGCGCGCCCGCCTCGCCCGGGCACCGAGCAGGAAGTGGCTGCGGCGC
GGCCTCCTCGCGGTGCAACAGGGCGGGGAGGCGGCCGCAGCCCGAGCCGGAGCCCGAGCGCCGGGAGCGAGACCTCATGGCAGCGGTGGC
GCCCGCGGGCCCCGGGGACTCCGCCTCGGCCGCCCTGGACGAGCTGTCACTGAATTTCACGTACGGGGCACCAGGCGCCGGCAACGGCTC
CCTCTCGGGCGACTGGTACCGCAGGAACCAGGATGGAATCAAACAATATGCAAATACTTCAGTGCCTGCTATCAAAACTGCTTTACTCAG
TGATTCCTTCCTAGGCCTCCAACCATATGGCCGACAGCCAACCTGGTGCTACTCAAAGTATATAGAAGCCTTAGAACAGGAGAGAATTCT
TCTTAAGATCCAAGAAGAACTAGAAAAAAAGTTGTTTGCAGGCTTGCAACCTCTCACAAATTTTAAGGCTAGCTCTTCAACTATGTCTTT
GAAAAAGAATATGTCTGCCCACAGCAGCCAGAAGTGACAGCATTCTTGTGAATGTTTACATCCTGCTGCTGATAGGTTCAAGGAATTCTT
TAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTGTTTTTTTGAAGGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTG


Top

FusionGenePPI for NIPAL2_RGS22


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page

.

check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors
NIPAL2RGS22


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


Top

RelatedDrugs for NIPAL2_RGS22


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.0 2018-04-02)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

Top

RelatedDiseases for NIPAL2_RGS22


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource
HgeneNIPAL2C0023893Liver Cirrhosis, Experimental1CTD_human