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Fusion gene ID: 23433 |
FusionGeneSummary for NARS2_RSF1 |
Fusion gene summary |
Fusion gene information | Fusion gene name: NARS2_RSF1 | Fusion gene ID: 23433 | Hgene | Tgene | Gene symbol | NARS2 | RSF1 | Gene ID | 79731 | 51773 |
Gene name | asparaginyl-tRNA synthetase 2, mitochondrial | remodeling and spacing factor 1 | |
Synonyms | DFNB94|SLM5|asnRS | HBXAP|RSF-1|XAP8|p325 | |
Cytomap | 11q14.1 | 11q14.1 | |
Type of gene | protein-coding | protein-coding | |
Description | probable asparagine--tRNA ligase, mitochondrialasparagine tRNA ligase 2, mitochondrial (putative)asparaginyl-tRNA synthetase 2, mitochondrial (putative)deafness, autosomal recessive 94probable asparaginyl-tRNA synthetase, mitochondrial | remodeling and spacing factor 1HBV pX-associated protein 8hepatitis B virus x-associated proteinp325 subunit of RSF chromatin-remodeling complex | |
Modification date | 20180519 | 20180523 | |
UniProtAcc | Q96I59 | Q96T23 | |
Ensembl transtripts involved in fusion gene | ENST00000281038, ENST00000528850, | ENST00000308488, ENST00000360355, ENST00000480887, ENST00000530604, | |
Fusion gene scores | * DoF score | 12 X 8 X 5=480 | 10 X 8 X 7=560 |
# samples | 13 | 11 | |
** MAII score | log2(13/480*10)=-1.88452278258006 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(11/560*10)=-2.34792330342031 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: NARS2 [Title/Abstract] AND RSF1 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation | Oncogene involved fusion gene, in-frame and retained their domain. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Tgene | RSF1 | GO:0006334 | nucleosome assembly | 12972596 |
Tgene | RSF1 | GO:0006338 | chromatin remodeling | 9836642 |
Tgene | RSF1 | GO:0006352 | DNA-templated transcription, initiation | 9836642 |
Tgene | RSF1 | GO:0016584 | nucleosome positioning | 9836642 |
Tgene | RSF1 | GO:0043392 | negative regulation of DNA binding | 12972596 |
Tgene | RSF1 | GO:0045892 | negative regulation of transcription, DNA-templated | 11944984 |
Tgene | RSF1 | GO:0045893 | positive regulation of transcription, DNA-templated | 11788598 |
Tgene | RSF1 | GO:0050434 | positive regulation of viral transcription | 11788598 |
Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | LD | SARC | TCGA-QQ-A5VC-01A | NARS2 | chr11 | 78239888 | - | RSF1 | chr11 | 77378536 | - |
ChiTaRS3.1 | BF947498 | NARS2 | chr11 | 78240831 | + | RSF1 | chr11 | 77416392 | - |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000281038 | ENST00000308488 | NARS2 | chr11 | 78239888 | - | RSF1 | chr11 | 77378536 | - |
In-frame | ENST00000281038 | ENST00000360355 | NARS2 | chr11 | 78239888 | - | RSF1 | chr11 | 77378536 | - |
Frame-shift | ENST00000281038 | ENST00000480887 | NARS2 | chr11 | 78239888 | - | RSF1 | chr11 | 77378536 | - |
5CDS-intron | ENST00000281038 | ENST00000530604 | NARS2 | chr11 | 78239888 | - | RSF1 | chr11 | 77378536 | - |
In-frame | ENST00000528850 | ENST00000308488 | NARS2 | chr11 | 78239888 | - | RSF1 | chr11 | 77378536 | - |
In-frame | ENST00000528850 | ENST00000360355 | NARS2 | chr11 | 78239888 | - | RSF1 | chr11 | 77378536 | - |
Frame-shift | ENST00000528850 | ENST00000480887 | NARS2 | chr11 | 78239888 | - | RSF1 | chr11 | 77378536 | - |
5CDS-intron | ENST00000528850 | ENST00000530604 | NARS2 | chr11 | 78239888 | - | RSF1 | chr11 | 77378536 | - |
intron-intron | ENST00000281038 | ENST00000308488 | NARS2 | chr11 | 78240831 | + | RSF1 | chr11 | 77416392 | - |
intron-intron | ENST00000281038 | ENST00000360355 | NARS2 | chr11 | 78240831 | + | RSF1 | chr11 | 77416392 | - |
intron-intron | ENST00000281038 | ENST00000480887 | NARS2 | chr11 | 78240831 | + | RSF1 | chr11 | 77416392 | - |
intron-intron | ENST00000281038 | ENST00000530604 | NARS2 | chr11 | 78240831 | + | RSF1 | chr11 | 77416392 | - |
intron-intron | ENST00000528850 | ENST00000308488 | NARS2 | chr11 | 78240831 | + | RSF1 | chr11 | 77416392 | - |
intron-intron | ENST00000528850 | ENST00000360355 | NARS2 | chr11 | 78240831 | + | RSF1 | chr11 | 77416392 | - |
intron-intron | ENST00000528850 | ENST00000480887 | NARS2 | chr11 | 78240831 | + | RSF1 | chr11 | 77416392 | - |
intron-intron | ENST00000528850 | ENST00000530604 | NARS2 | chr11 | 78240831 | + | RSF1 | chr11 | 77416392 | - |
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FusionProtFeatures for NARS2_RSF1 |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
NARS2 | RSF1 |
Required for assembly of regular nucleosome arrays bythe RSF chromatin-remodeling complex (PubMed:12972596).Facilitates transcription of hepatitis B virus (HBV) genes by thepX transcription activator. In case of infection by HBV, togetherwith pX, it represses TNF-alpha induced NF-kappa-B transcriptionactivation. Represses transcription when artificially recruited tochromatin by fusion to a heterogeneous DNA binding domain(PubMed:11944984, PubMed:11788598). {ECO:0000269|PubMed:11788598,ECO:0000269|PubMed:11944984, ECO:0000269|PubMed:12972596}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | >RSF1 | chr11:78239888 | chr11:77378536 | ENST00000308488 | - | 14 | 16 | 1286_1292 | 1250 | 1442 | Compositional bias | Note=Poly-Glu |
Tgene | >RSF1 | chr11:78239888 | chr11:77378536 | ENST00000308488 | - | 14 | 16 | 1419_1424 | 1250 | 1442 | Compositional bias | Note=Poly-Glu |
Tgene | >RSF1 | chr11:78239888 | chr11:77378536 | ENST00000360355 | - | 13 | 15 | 1286_1292 | 1219 | 1411 | Compositional bias | Note=Poly-Glu |
Tgene | >RSF1 | chr11:78239888 | chr11:77378536 | ENST00000360355 | - | 13 | 15 | 1419_1424 | 1219 | 1411 | Compositional bias | Note=Poly-Glu |
Tgene | >RSF1 | chr11:78239888 | chr11:77378536 | ENST00000480887 | - | 9 | 11 | 1080_1083 | 998 | 1190 | Compositional bias | Note=Poly-Ala |
Tgene | >RSF1 | chr11:78239888 | chr11:77378536 | ENST00000480887 | - | 9 | 11 | 1146_1243 | 998 | 1190 | Compositional bias | Note=Arg-rich |
Tgene | >RSF1 | chr11:78239888 | chr11:77378536 | ENST00000480887 | - | 9 | 11 | 1286_1292 | 998 | 1190 | Compositional bias | Note=Poly-Glu |
Tgene | >RSF1 | chr11:78239888 | chr11:77378536 | ENST00000480887 | - | 9 | 11 | 1419_1424 | 998 | 1190 | Compositional bias | Note=Poly-Glu |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | RSF1 | chr11:78239888 | chr11:77378536 | ENST00000308488 | - | 14 | 16 | 942_1012 | 1250 | 1442 | Coiled coil | Ontology_term=ECO:0000255 |
Tgene | RSF1 | chr11:78239888 | chr11:77378536 | ENST00000360355 | - | 13 | 15 | 942_1012 | 1219 | 1411 | Coiled coil | Ontology_term=ECO:0000255 |
Tgene | RSF1 | chr11:78239888 | chr11:77378536 | ENST00000480887 | - | 9 | 11 | 942_1012 | 998 | 1190 | Coiled coil | Ontology_term=ECO:0000255 |
Tgene | RSF1 | chr11:78239888 | chr11:77378536 | ENST00000308488 | - | 14 | 16 | 1080_1083 | 1250 | 1442 | Compositional bias | Note=Poly-Ala |
Tgene | RSF1 | chr11:78239888 | chr11:77378536 | ENST00000308488 | - | 14 | 16 | 1146_1243 | 1250 | 1442 | Compositional bias | Note=Arg-rich |
Tgene | RSF1 | chr11:78239888 | chr11:77378536 | ENST00000308488 | - | 14 | 16 | 226_372 | 1250 | 1442 | Compositional bias | Note=Glu-rich |
Tgene | RSF1 | chr11:78239888 | chr11:77378536 | ENST00000308488 | - | 14 | 16 | 875_884 | 1250 | 1442 | Compositional bias | Note=Poly-Glu |
Tgene | RSF1 | chr11:78239888 | chr11:77378536 | ENST00000360355 | - | 13 | 15 | 1080_1083 | 1219 | 1411 | Compositional bias | Note=Poly-Ala |
Tgene | RSF1 | chr11:78239888 | chr11:77378536 | ENST00000360355 | - | 13 | 15 | 1146_1243 | 1219 | 1411 | Compositional bias | Note=Arg-rich |
Tgene | RSF1 | chr11:78239888 | chr11:77378536 | ENST00000360355 | - | 13 | 15 | 226_372 | 1219 | 1411 | Compositional bias | Note=Glu-rich |
Tgene | RSF1 | chr11:78239888 | chr11:77378536 | ENST00000360355 | - | 13 | 15 | 875_884 | 1219 | 1411 | Compositional bias | Note=Poly-Glu |
Tgene | RSF1 | chr11:78239888 | chr11:77378536 | ENST00000480887 | - | 9 | 11 | 226_372 | 998 | 1190 | Compositional bias | Note=Glu-rich |
Tgene | RSF1 | chr11:78239888 | chr11:77378536 | ENST00000480887 | - | 9 | 11 | 875_884 | 998 | 1190 | Compositional bias | Note=Poly-Glu |
Tgene | RSF1 | chr11:78239888 | chr11:77378536 | ENST00000308488 | - | 14 | 16 | 17_84 | 1250 | 1442 | Domain | Note=DDT |
Tgene | RSF1 | chr11:78239888 | chr11:77378536 | ENST00000360355 | - | 13 | 15 | 17_84 | 1219 | 1411 | Domain | Note=DDT |
Tgene | RSF1 | chr11:78239888 | chr11:77378536 | ENST00000480887 | - | 9 | 11 | 17_84 | 998 | 1190 | Domain | Note=DDT |
Tgene | RSF1 | chr11:78239888 | chr11:77378536 | ENST00000308488 | - | 14 | 16 | 891_941 | 1250 | 1442 | Zinc finger | PHD-type |
Tgene | RSF1 | chr11:78239888 | chr11:77378536 | ENST00000360355 | - | 13 | 15 | 891_941 | 1219 | 1411 | Zinc finger | PHD-type |
Tgene | RSF1 | chr11:78239888 | chr11:77378536 | ENST00000480887 | - | 9 | 11 | 891_941 | 998 | 1190 | Zinc finger | PHD-type |
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FusionGeneSequence for NARS2_RSF1 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_NARS2_ENST00000281038_chr11_78239888_-_RSF1_ENST00000308488_chr11_77378536_-_421aa MLGVRCLLRSVRFCSSAPFPKHKPSAKLSVRDALGAQNASGERIKIQGWIRSVRSQKEVLFLHVNDGSSLESLQVVADSGLDSRELNFGS SVEVQGQLIKSPSKRQNVELKAEKIKVIGNCDAKDFPIKYKERHPLEYLRQYPHFRCRTNVLGSILRIRSEATAAIHSFFKDSGFVHIHT PIITSNDSEGAGELFQLEPSGKLKVPEENFFNVPAFLTVSGQLHLEVMSGELFVQELXRXXASXRIKAVSSKAGPKHRRVFRSRXGGGGR GRQTIPQTATPDXDGXGGELXQCSWRCKSACPXQPAXGPALRTREHQEALPDRKXXGRGLXKCRQSGEPIGLXLSGLTFNQWTEPWQSHX >In-frame_NARS2_ENST00000281038_chr11_78239888_-_RSF1_ENST00000360355_chr11_77378536_-_421aa MLGVRCLLRSVRFCSSAPFPKHKPSAKLSVRDALGAQNASGERIKIQGWIRSVRSQKEVLFLHVNDGSSLESLQVVADSGLDSRELNFGS SVEVQGQLIKSPSKRQNVELKAEKIKVIGNCDAKDFPIKYKERHPLEYLRQYPHFRCRTNVLGSILRIRSEATAAIHSFFKDSGFVHIHT PIITSNDSEGAGELFQLEPSGKLKVPEENFFNVPAFLTVSGQLHLEVMSGELFVQELXRXXASXRIKAVSSKAGPKHRRVFRSRXGGGGR GRQTIPQTATPDXDGXGGELXQCSWRCKSACPXQPAXGPALRTREHQEALPDRKXXGRGLXKCRQSGEPIGLXLSGLTFNQWTEPWQSHX >In-frame_NARS2_ENST00000528850_chr11_78239888_-_RSF1_ENST00000308488_chr11_77378536_-_194aa MSGELFVQELXRXXASXRIKAVSSKAGPKHRRVFRSRXGGGGRGRQTIPQTATPDXDGXGGELXQCSWRCKSACPXQPAXGPALRTREHQ EALPDRKXXGRGLXKCRQSGEPIGLXLSGLTFNQWTEPWQSHXELDWQAYXEVSDPQGQQHSQCKPSLQWDKWWAGGRSTRRGGRXAFES >In-frame_NARS2_ENST00000528850_chr11_78239888_-_RSF1_ENST00000360355_chr11_77378536_-_194aa MSGELFVQELXRXXASXRIKAVSSKAGPKHRRVFRSRXGGGGRGRQTIPQTATPDXDGXGGELXQCSWRCKSACPXQPAXGPALRTREHQ EALPDRKXXGRGLXKCRQSGEPIGLXLSGLTFNQWTEPWQSHXELDWQAYXEVSDPQGQQHSQCKPSLQWDKWWAGGRSTRRGGRXAFES |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_NARS2_ENST00000281038_chr11_78239888_-_RSF1_ENST00000308488_chr11_77378536_-_1264nt ATGCTGGGGGTCCGCTGCCTGCTGCGGTCCGTGCGCTTCTGTTCCTCCGCCCCCTTCCCCAAGCACAAACCTTCAGCCAAACTGAGCGTG CGGGACGCTCTCGGGGCTCAGAACGCGAGTGGGGAGCGCATTAAGATCCAGGGATGGATTCGTTCTGTCCGATCCCAGAAGGAAGTCTTG TTCCTGCATGTAAATGATGGGTCATCTTTGGAAAGCCTTCAGGTTGTTGCAGATTCAGGCCTTGACAGTAGAGAATTAAATTTTGGGAGT TCTGTGGAAGTACAAGGGCAGCTGATAAAAAGTCCATCCAAAAGGCAAAATGTGGAACTGAAGGCAGAAAAAATTAAAGTTATTGGAAAT TGTGATGCCAAGGATTTCCCCATCAAATATAAAGAGAGGCATCCTCTGGAGTATCTGCGACAATATCCTCACTTTAGGTGTAGGACTAAC GTTCTGGGTTCTATATTGAGGATTCGCAGTGAAGCGACAGCTGCTATTCATTCTTTCTTTAAGGACAGTGGCTTTGTACATATTCATACT CCAATAATCACATCCAATGACTCTGAGGGAGCTGGAGAACTTTTTCAACTTGAACCTTCAGGCAAACTTAAGGTACCTGAGGAGAATTTC TTCAATGTTCCTGCTTTCTTAACTGTCTCAGGACAACTTCATCTAGAAGTGATGTCAGGAGAGCTATTTGTCCAAGAACTCTGAAGATGA TGAGCTAGCTAAAGAATCAAAGCGGTCAGTTCGAAAGCGGGGCCGAAGCACAGACGAGTATTCAGAAGCAGATGAGGAGGAGGAGGAAGA GGAAGGCAAACCATCCCGCAAACGGCTACACCGGATTGAGACGGATGAGGAGGAGAGTTGTGACAATGCTCATGGAGATGCAAATCAGCC TGCCCGTGACAGCCAGCCTAGGGTCCTGCCCTCAGAACAAGAGAGCACCAAGAAGCCCTACCGGATAGAAAGTGATGAGGAAGAGGACTT TGAAAATGTAGGCAAAGTGGGGAGCCCATTGGACTATAGCTTAGTGGACTTACCTTCAACCAATGGACAGAGCCCTGGCAAAGCCATTGA GAACTTGATTGGCAAGCCTACTGAGAAGTCTCAGACCCCCAAGGACAACAGCACAGCCAGTGCAAGCCTAGCCTCCAATGGGACAAGTGG TGGGCAGGAGGCAGGAGCACCAGAAGAGGAGGAAGATGAGCTTTTGAGAGTGACTGACCTTGTTGATTATGTCTGTAACAGTGAACAGTT >In-frame_NARS2_ENST00000281038_chr11_78239888_-_RSF1_ENST00000360355_chr11_77378536_-_1264nt ATGCTGGGGGTCCGCTGCCTGCTGCGGTCCGTGCGCTTCTGTTCCTCCGCCCCCTTCCCCAAGCACAAACCTTCAGCCAAACTGAGCGTG CGGGACGCTCTCGGGGCTCAGAACGCGAGTGGGGAGCGCATTAAGATCCAGGGATGGATTCGTTCTGTCCGATCCCAGAAGGAAGTCTTG TTCCTGCATGTAAATGATGGGTCATCTTTGGAAAGCCTTCAGGTTGTTGCAGATTCAGGCCTTGACAGTAGAGAATTAAATTTTGGGAGT TCTGTGGAAGTACAAGGGCAGCTGATAAAAAGTCCATCCAAAAGGCAAAATGTGGAACTGAAGGCAGAAAAAATTAAAGTTATTGGAAAT TGTGATGCCAAGGATTTCCCCATCAAATATAAAGAGAGGCATCCTCTGGAGTATCTGCGACAATATCCTCACTTTAGGTGTAGGACTAAC GTTCTGGGTTCTATATTGAGGATTCGCAGTGAAGCGACAGCTGCTATTCATTCTTTCTTTAAGGACAGTGGCTTTGTACATATTCATACT CCAATAATCACATCCAATGACTCTGAGGGAGCTGGAGAACTTTTTCAACTTGAACCTTCAGGCAAACTTAAGGTACCTGAGGAGAATTTC TTCAATGTTCCTGCTTTCTTAACTGTCTCAGGACAACTTCATCTAGAAGTGATGTCAGGAGAGCTATTTGTCCAAGAACTCTGAAGATGA TGAGCTAGCTAAAGAATCAAAGCGGTCAGTTCGAAAGCGGGGCCGAAGCACAGACGAGTATTCAGAAGCAGATGAGGAGGAGGAGGAAGA GGAAGGCAAACCATCCCGCAAACGGCTACACCGGATTGAGACGGATGAGGAGGAGAGTTGTGACAATGCTCATGGAGATGCAAATCAGCC TGCCCGTGACAGCCAGCCTAGGGTCCTGCCCTCAGAACAAGAGAGCACCAAGAAGCCCTACCGGATAGAAAGTGATGAGGAAGAGGACTT TGAAAATGTAGGCAAAGTGGGGAGCCCATTGGACTATAGCTTAGTGGACTTACCTTCAACCAATGGACAGAGCCCTGGCAAAGCCATTGA GAACTTGATTGGCAAGCCTACTGAGAAGTCTCAGACCCCCAAGGACAACAGCACAGCCAGTGCAAGCCTAGCCTCCAATGGGACAAGTGG TGGGCAGGAGGCAGGAGCACCAGAAGAGGAGGAAGATGAGCTTTTGAGAGTGACTGACCTTGTTGATTATGTCTGTAACAGTGAACAGTT >In-frame_NARS2_ENST00000528850_chr11_78239888_-_RSF1_ENST00000308488_chr11_77378536_-_583nt ATGTCAGGAGAGCTATTTGTCCAAGAACTCTGAAGATGATGAGCTAGCTAAAGAATCAAAGCGGTCAGTTCGAAAGCGGGGCCGAAGCAC AGACGAGTATTCAGAAGCAGATGAGGAGGAGGAGGAAGAGGAAGGCAAACCATCCCGCAAACGGCTACACCGGATTGAGACGGATGAGGA GGAGAGTTGTGACAATGCTCATGGAGATGCAAATCAGCCTGCCCGTGACAGCCAGCCTAGGGTCCTGCCCTCAGAACAAGAGAGCACCAA GAAGCCCTACCGGATAGAAAGTGATGAGGAAGAGGACTTTGAAAATGTAGGCAAAGTGGGGAGCCCATTGGACTATAGCTTAGTGGACTT ACCTTCAACCAATGGACAGAGCCCTGGCAAAGCCATTGAGAACTTGATTGGCAAGCCTACTGAGAAGTCTCAGACCCCCAAGGACAACAG CACAGCCAGTGCAAGCCTAGCCTCCAATGGGACAAGTGGTGGGCAGGAGGCAGGAGCACCAGAAGAGGAGGAAGATGAGCTTTTGAGAGT >In-frame_NARS2_ENST00000528850_chr11_78239888_-_RSF1_ENST00000360355_chr11_77378536_-_583nt ATGTCAGGAGAGCTATTTGTCCAAGAACTCTGAAGATGATGAGCTAGCTAAAGAATCAAAGCGGTCAGTTCGAAAGCGGGGCCGAAGCAC AGACGAGTATTCAGAAGCAGATGAGGAGGAGGAGGAAGAGGAAGGCAAACCATCCCGCAAACGGCTACACCGGATTGAGACGGATGAGGA GGAGAGTTGTGACAATGCTCATGGAGATGCAAATCAGCCTGCCCGTGACAGCCAGCCTAGGGTCCTGCCCTCAGAACAAGAGAGCACCAA GAAGCCCTACCGGATAGAAAGTGATGAGGAAGAGGACTTTGAAAATGTAGGCAAAGTGGGGAGCCCATTGGACTATAGCTTAGTGGACTT ACCTTCAACCAATGGACAGAGCCCTGGCAAAGCCATTGAGAACTTGATTGGCAAGCCTACTGAGAAGTCTCAGACCCCCAAGGACAACAG CACAGCCAGTGCAAGCCTAGCCTCCAATGGGACAAGTGGTGGGCAGGAGGCAGGAGCACCAGAAGAGGAGGAAGATGAGCTTTTGAGAGT |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_NARS2_ENST00000281038_chr11_78239888_-_RSF1_ENST00000308488_chr11_77378536_-_8561nt GTAGCGTGATGACGTAAGCGGCGTTGGCGTGGTGTGGTAGGAGTGGTTGCGCGTGTTGCGGCCCGGGTTCTGTTCGTAGGTTTACAATTG TCGCGGGTAGTGGGGCGCCCCAGCTGCCAACTGCACGTGGTTTCTTTCTGGCGTTTGCCTAGTGTCCTGTCCATTCCGCCCCGTTGGGAA GTGGGAAGCGGAGAGGTTCTGTGGGGACAGAGCTGGGAGTCCTGAAGGAGAAAGCGCGCAGCCGAGGGGCTCTGGAGTGCCTTAGAGCAG AGCTGCGGCCGCGGAAGGGGAGCAGCTGAGAAAGGAGGGCCGCTGCAGGCGGGGTTCGAACCGTGGGGTCTGGGCTGCTCCCGCGGAGGG CCTGGGCGGACGCGGGATGCTGGGGGTCCGCTGCCTGCTGCGGTCCGTGCGCTTCTGTTCCTCCGCCCCCTTCCCCAAGCACAAACCTTC AGCCAAACTGAGCGTGCGGGACGCTCTCGGGGCTCAGAACGCGAGTGGGGAGCGCATTAAGATCCAGGGATGGATTCGTTCTGTCCGATC CCAGAAGGAAGTCTTGTTCCTGCATGTAAATGATGGGTCATCTTTGGAAAGCCTTCAGGTTGTTGCAGATTCAGGCCTTGACAGTAGAGA ATTAAATTTTGGGAGTTCTGTGGAAGTACAAGGGCAGCTGATAAAAAGTCCATCCAAAAGGCAAAATGTGGAACTGAAGGCAGAAAAAAT TAAAGTTATTGGAAATTGTGATGCCAAGGATTTCCCCATCAAATATAAAGAGAGGCATCCTCTGGAGTATCTGCGACAATATCCTCACTT TAGGTGTAGGACTAACGTTCTGGGTTCTATATTGAGGATTCGCAGTGAAGCGACAGCTGCTATTCATTCTTTCTTTAAGGACAGTGGCTT TGTACATATTCATACTCCAATAATCACATCCAATGACTCTGAGGGAGCTGGAGAACTTTTTCAACTTGAACCTTCAGGCAAACTTAAGGT ACCTGAGGAGAATTTCTTCAATGTTCCTGCTTTCTTAACTGTCTCAGGACAACTTCATCTAGAAGTGATGTCAGGAGAGCTATTTGTCCA AGAACTCTGAAGATGATGAGCTAGCTAAAGAATCAAAGCGGTCAGTTCGAAAGCGGGGCCGAAGCACAGACGAGTATTCAGAAGCAGATG AGGAGGAGGAGGAAGAGGAAGGCAAACCATCCCGCAAACGGCTACACCGGATTGAGACGGATGAGGAGGAGAGTTGTGACAATGCTCATG GAGATGCAAATCAGCCTGCCCGTGACAGCCAGCCTAGGGTCCTGCCCTCAGAACAAGAGAGCACCAAGAAGCCCTACCGGATAGAAAGTG ATGAGGAAGAGGACTTTGAAAATGTAGGCAAAGTGGGGAGCCCATTGGACTATAGCTTAGTGGACTTACCTTCAACCAATGGACAGAGCC CTGGCAAAGCCATTGAGAACTTGATTGGCAAGCCTACTGAGAAGTCTCAGACCCCCAAGGACAACAGCACAGCCAGTGCAAGCCTAGCCT CCAATGGGACAAGTGGTGGGCAGGAGGCAGGAGCACCAGAAGAGGAGGAAGATGAGCTTTTGAGAGTGACTGACCTTGTTGATTATGTCT GTAACAGTGAACAGTTATAAGACTTTTTTTCCATTTTTGTGCTAATTTATTCCACGGTAGCTCTCACACCAGCGGGCCAGTTATTAAAAG CTGTTTAATTTTTCCTAGAAAACTCCACTACAGAATGACTTTTAGAAGAAAAATTTCAACAAATCCTGAAGTCTTTCTGTGAAGTGACCA GTTCTGAACTTTGAAGATAAATAATTGCTGTAAATTCCTTTTGATTTTCTTTTTCCAGGTTCATGGTCCTTGGTAATTTCATTCATGGAA AAAAATCTTATTATAATAACAACAAAGATTTGTATATTTTTGACTTTATATTTCCTGAGCTCTCCTGACTTTGTGAAAAAGGGTGGATGA AAATGCATTCCGAATCTGTGAGGGCCCAAAACAGAATTTAGGGGTGGGTGAAAGCACTTGTGCTTTAGCTTTTTCATATTAAATATATAT TATATTTAAACATTCATGGCATAGATGATGATTTACAGACAATTTAAAAGTTCAAGTCTGTACTGTTACAGTTTGAGAATTGTAGATAAC ATCATACATAAGTCATTTAGTAACAGCCTTTGTGAAATGAACTTGTTTACTATTGGAGATAACCACACTTAATAAAGAAGAGACAGTGAA AGTACCATCATAATTAACCTAAATTTTTGTTATAGCAGAGTTTCTTGTTTAAAAAAAAATAAAATCATCTGAAAAGCATTTGTACAGTAA AATGTATAATGAAGCTTTGCCAACCAGACTGTGCTAGCAACAAATTTTTTTAAATAAGCTTTATGCAGTGGTAATAAGGTGGCCTCAAAT ATATTGTGTCTGATGGAGAGTTATTAGTGAAATGAATGTGGTCTTTCTTAAGGCCTGGGTGGACTGTAAACTTTGCCAATAGTATAACTC TTGTCTTCTGGCCACTTGATGTTTAAATATCTGAAATATCATTTTGAAAAAAATACATCTATATATAACATACATGAAGAGATGCTAAGC TGACAGTGATATTTTAGCACATTTGAAGACTGGGAAGAGATTTTCAGGTGAATTTTAACTGGTCTATTCTTGCCCTTAGTATCTACTTCA AATTGAAGTCTACAAACAAAGCAGTTCCTTTGGGAGGTTTTTAGTTTGAGTTTTAGCGTGTGTGTGTGTTTGTGTGTGTGCGTGTGCGTG TGTGTGTGTGTTGGAATTTCCTATCTGCCTGGATATATTAGCAGAGTTTGAATGTAGTTTTGGCCTTTGGCCATTAGACTTCTATTAAAA TTCATTAATAGTCATACAACCAACATAGAGTTGAATGAGAACTGCCGATGTAATTAATAGGCATGACATCCATTTCAAACATCTCAACAC TTTAAAGAAAAGCCCTTTGTTTCAAGAAAAAAGGGTTTGTAACTAACTAAATACCTAACATGTAATTGACACTAAAATATGAACTTTGTC TTATTTAGTTTCTGTTATAGCTGTAAAATTTCAGGCAGAGCCATAACATTGTACAGAGTGTAGCACTTGTGATTAAACCTAGCCTGTTAA ATCCTGAAACCTTCAACCATTACTTCTGTGAATACTTTAGCCCTGGGATTTGGGTTTTTCTGTTCCGGTGTTGTGTCTGTTGCCGGCAAT GGACACACCATATCTGCTGCTGGCCCAAGGAACGTCATTAATTTTTCTTTCCAAATTAAGTATTATGTGCTAGTCAGTGTATAGTAAAGC ACTTCTCTTTTTTATTACTAAAAAGCTGGCATTAGATTTGCATTATAAATACCTCTCTAGGAACTTTATACTCCTTTTCCTTCTTCAACA GGTATTGCCCTTAAATCTTATCTTTTGGCCTTGAAAGTTTATAGCTATTGTTTTTCAGTTGTTCGTTGTTTTGTTTTGTTTCACTTTAGT TCTGTAGTACCTGCCCATTAATATTTTTGCTTTGATTCTAGCAATGTGTATGTATCTGTATAAAAAATAAAATAATGAAAGCAACCTAAA AATAGGATGCACCAATAGCATGTGGTTCCAAGTAAGTTGTGATTTTTATTTTGAGACAGTGTTCCACTGGAAGGGAGGGAAGGGCTTACA TTCACAGACAGTAAAGCAGGGCTGTGTAAGGAGCTACATTTACTTAACAGTCTCCTTTCCAGCTAGGTTTGTTTTATTTATTTGCAAGTC AGCTAAGAATTAACCTTTTAAACCATCTAAAACAGGCAAGCAATATAAAGATTTCTACTAGTGCAAGGTAAGTGGTTTGAATATACAAGT GCCCTTTCCTGCCACCCAGTCTCACTACCGTTTTAGTCCTGCAGCTGGGTAAAGCCACTATTGTGTGGAAACTCTCCCATGTGCCCTGTC TCTACCTCTGGACACACCAGCTCCTTCTTCCACCTATTCTATTCCTCAGTTAAGCCAAGTGATCAGAAGTAGTATTAAATGGGTAGATAA TTTTAACAGGATGCCTAATGTGAAATAAGGAGTTATTTTTACTCTTCTACTATAGAAAGCCTAAGGTAATTCTTACCATCTCAAAGACTG AGTATTCCATTTAGGTTTGGAGACCACTTGTGCTGTGCTGCCTGATATTTACCAAACTTGAATAAGTGTTCGTCAACTTGATAGTGAATG TACCCCTTCTCACCTTATATTTTGATTAAATCAATTAACTATAGGTCATCTACCAAGAATGTAATCCAAGCGGTTGATAAAACATTATTA GGCAGATAGATTATTGATTATTAAATTTTGAGCAGTGCAAAAACGGTTTTGCTGCTTGGAGTTCAGATTCAGTCCCTCAAAGAGTTTATG ATCACTGAAATACACTCTGAAGGTATTCTGAAGAAGTTAAAAAATTTTAGAAAACGAAATGTTCTGTATACAAAGACAATACAGTCACTA CGAACTGCAGAAAGTATAGGAAAGCAGTAATTGATGTAGAGTTTAGACAGTCTTGGATCTTTTTTAGAGCACTAACCATGGATTTAGACT CAAAATAGCTGCTACATAATAGAGCCCTTTAATAATTTAAACCCCCCTTGTTGAAATACAAGTTGGACTCCCAGTGTCAAACTCTAGACT GTAGCTAATGTATTAAAGGGAGATGTAGATTAATATTCAGTATATTTAGTTTGCAATTTCTGAAAAGGTTTGAAAACTAGTCAGCTTTTC ACACAGCAGAAGCTTTGAACTGAAATATGTGTGAAAAGGACGCAGACTGAAAACGTTTTGGTTTTGTACATCAGTGCTGATGAAATTAGT GTAAAACATTTTCCATCATTGGCACATTACTGCAAAATGATGGCAGAGATATTTTCAAGAATGTACATCAAGTTATATTTCCTTGACATC CTTTTTTCAATTGGTCAAGGTTACAGATTCAGAGGATAAAGGGTAGTTTCATTTAGAATAAATTCATGTCTACTGGCAATCTATATATAA AAGTGACCTGCCCAAGAACCAAAAACTTTAAATGCTAATGAAGCTTTTGAAAAATAATTTTTAAACAAATTAATTTTAAAAGGGTGTTAC ACGTACCCAGTTTTTACTTTTTAGTTGATGAAACCCATCCTATAATATACATTTGAGCAAAGTACACATATTAAGAAAAACATGGACATT TACTTGTTTAATAGTCAAAATGATGAGGAAATGTTAGCTGTTTTTAAGTGGGACTGGTGGGGTGTCCTTTGTCACAAGGAATGCTTTTTT AGCTTGTTTGTGGGCATAAGAGATGTTAACCCTTTGCTGATTCTACCACACAACTGTAAAGAACCTAATGAATCTACAAGTTTAATATTC AGAAAAAGCTAGGAACTCCGCTCTTTACCAGTACAGTGGAACAGGCCCGTTATTCAAGGTGATGCCTCACAGCTATAGAACAACTATTCA AAGACCCAGAGTTAAATGGTACATGTGTATATGTGTGTGTGTGTGTGCACACGCACACACTTCAGATAAGTATCAGAAAAAATAAAAATG AATCCATCATTAACTTGAAAGAAATAAGATGGCTGCATTGCAACAGATACAAATATTATGAACATCATTTAATTACAGAAAATCTAGACA ACAGTTTCTCCTGATGTTTGACATTCTCAAAATATATTCCTCATTCTCGAAGAAGCAGAGAATGCCAAGGCTGCATATCTGCTGTAATCT ACCTAGCCCTCTTCTGCTTAATATGATCCATTATTGAATCTTCTCAGATTAAAATCCATTCCTATATCATCTACCTTTCCCAAAGTGTGT GCCTGTAAACCTACCTTGGAAGTGGCAAGTTAACTGATTTTTTTGTGTCATTTTTATACCAATCCTTAAGGTCAAAGCCTTTTGCTATCA ATGTATTTAAACTGAGTTGCTATATGTTCACTAATTTGTTTTCAAAATGTTTTGCTCCAACTTAAATTATCTTTTAACATCTTTTGAGTG CCAAGAATTGCTAAGTAACTGTAATATGTTGAAGAGAGTAATTGCCAAGCAAGCAGTCATAAGCCAAAATGTAATGAGCTTAGTATATAA CCACTTTAGAGTATACACTCACCACTTTTTGTATTCATTCATGCAAACCCTCCTGGAAGTCGATTAGAAGAGGATCCAATTTGTGGACCT TTTTTCCTCCTTTTGGACACCTGAGCACAATTTTTTTTTTCCTTTCATATTTATACCACTTTGGAAAATTCAGTAAACCCAATTCTGGCA CATCATAATGGTTTCAGTTAGTGAAGATGTTTATTTTAATAACTTTAAAATATGACTATCCTATACATAAGTTATATAAGAGGGCATAAC AATAGATGAGTAGAAATTTATAAAATTTCTTGGATATTTTGAATGAGAAAAAAACATTTTTAAAGGAATTTTGTTTTTTCCTTTTTTGGC CAAACCGGTACAAGTTAGAAAGTGTGCTAAGGACTGAATACTTGCCTCGTGCTTTTTGCCACTGGATGATGTAAGTTAAGAATGGAATTG TTAATCCTAAGTATATATTTTCTTGACTTTCATCAGTTTCTAAAGAAATCTAATTTAAGTGTTTTGCGGTTTTGTTTGATCTGTATTTAT TGAGTTCTGGTCATAGACCAGCAGCTTGCACGTCATGCTCATGAACAGCCAGAACATAGTTATTGGGGAACTTCATGGCTCAAAACCTTC TGAATCATTTAACTTATTTTGTATGTTGCAAAAAAAAAAAAAAAGTTTATTTTGCTTGAGAGTCACCTTTTTTTAAAAAAAATAACTGTA CAGCTTTTAAGGGATGGGAGGTGGGAAAATACCCTAAAATAGGATGTAGATTTTTTACAATTGTGTTTATGCTAGATCATCTACAGGTGC ATTATGTAATTAAACCTAAAATTGTTTAAAAATTTGTGCCATGTCTTTTTCATTCTCCTGCCCTTTAGCAGAATTGGTGCATGTCAACTG CTATGTGGACAAGCCTTGAAATTAGAGTAACAAGCCCTGTCTCCAAAGCTTTAAGGTCACTGCATGAAAATTGCACACACACACACACAC ACACACACATCTAGCTTATATTAGTAAATGGATTTTCAGGATCAGAACAGCTACAGTAGCCCAGATTTGGCTGTTAACAGCATATTCTTA CAGCACATGATTTTTGTGATGCCTAACTAGGGTATTCTCAATGTTAGTCTGGTGTTCTATTCTCTTTCAAAGTAGCTTCTTGAGATGGTA TCTGTTGTAGCTTGCCCAAACCTGCCATGAGGTTGTGTGTACACTTTGAAAGGGTATGTCCTATGCTAAGATGGTGGTAGAGCAGGGCTT GATTTTAATCTATTCATATAAAAGAAGGAAAAAACTAGAATTGGTCTATTTGGTTATTCAGTGGACTTAATTCCACAGGAATAGTTGTCT GCTGAAGCGTGGCAGCAAGAGAAGTCAAATTCAAGTTTCAGTTCCTTCCTTATTCACTAAGTATTTTGAAATCTTGTAGAACTTCTGATT CTAGCACAGTCTTTTACATGGCACATTTTACCATGGTATATTCACAGCTTCGTTTAAATGTCAGTACTTTTTCCCATCTGATAATTTTGC CATTCTAATTTCTCACCTTTGTAGTACAAGTGTATTCTTGAAAATAATTAAATTCATCTAAGTGTGTCATAATTTCAATCAAAGCTATAT TCATGTGTTGCCAGCGTCAGTTTTTTGCTATCCTCATTCAGAAGGGAAGCCTGCAGATCATGAGTTTCCATATGAAGAATACAAATTCCA CATAAAAATTTATAAATGGTATCTTTAGAATTTTGATTTAAAGTAATAGCTGGAATTCAGGGACTGATCAGAATGCCTCTTGAATTTTCC AACATGCTTATATGAAATGCTTTATTTTCCTATGCGTTAAAAAAAATATTCCTGGAATAGGTTCTCAGAATGTTTTATTTGGTTTCTAGG AGATGAGATTTAAAGCAGAAGCTCCAAGATTGGCATAAAACTAACTCTTGAGGTAATCAGGACCATGCTGTTAGTCAAATAGAAGCTGGA GTGCTCTCTGTCACATAATGTACTGCATGTGTGTGGGGGTGGGGGGGCAGGGAAGATCAGAAAACTGGAAATGTAATTCTGATAACACGC AAAGTAAATTGTGCATTAAAAGTATGGGAATTCTTGGTAGCTTAAAGCTTCAGGGGTTAACTTCAGTGTATGAACACCTAGTGTGTTAGA ATTGCAGTGCATAGTTGTTTAAATACAATATTCCTTGTAAGTGACAACCAAAATATGTTGTGGCTGGTGCCAGTATTTTTGTTAATGAAA TGTTCAGTGTCTCACTACAGTCTGATCAGAACTCTTGGTGTTATAAGCCAGGCCTAAAGCCATTTTATAGCTATTGGCCTAATTGTGTAA CTTTTTCTTTCAAAATGTTTTATTATAATACTTCTGTCATTTCTTTCACTTAATATGTCAATTGTCATAATAAAAATTTAAATTTGAATT >In-frame_NARS2_ENST00000281038_chr11_78239888_-_RSF1_ENST00000360355_chr11_77378536_-_2327nt GTAGCGTGATGACGTAAGCGGCGTTGGCGTGGTGTGGTAGGAGTGGTTGCGCGTGTTGCGGCCCGGGTTCTGTTCGTAGGTTTACAATTG TCGCGGGTAGTGGGGCGCCCCAGCTGCCAACTGCACGTGGTTTCTTTCTGGCGTTTGCCTAGTGTCCTGTCCATTCCGCCCCGTTGGGAA GTGGGAAGCGGAGAGGTTCTGTGGGGACAGAGCTGGGAGTCCTGAAGGAGAAAGCGCGCAGCCGAGGGGCTCTGGAGTGCCTTAGAGCAG AGCTGCGGCCGCGGAAGGGGAGCAGCTGAGAAAGGAGGGCCGCTGCAGGCGGGGTTCGAACCGTGGGGTCTGGGCTGCTCCCGCGGAGGG CCTGGGCGGACGCGGGATGCTGGGGGTCCGCTGCCTGCTGCGGTCCGTGCGCTTCTGTTCCTCCGCCCCCTTCCCCAAGCACAAACCTTC AGCCAAACTGAGCGTGCGGGACGCTCTCGGGGCTCAGAACGCGAGTGGGGAGCGCATTAAGATCCAGGGATGGATTCGTTCTGTCCGATC CCAGAAGGAAGTCTTGTTCCTGCATGTAAATGATGGGTCATCTTTGGAAAGCCTTCAGGTTGTTGCAGATTCAGGCCTTGACAGTAGAGA ATTAAATTTTGGGAGTTCTGTGGAAGTACAAGGGCAGCTGATAAAAAGTCCATCCAAAAGGCAAAATGTGGAACTGAAGGCAGAAAAAAT TAAAGTTATTGGAAATTGTGATGCCAAGGATTTCCCCATCAAATATAAAGAGAGGCATCCTCTGGAGTATCTGCGACAATATCCTCACTT TAGGTGTAGGACTAACGTTCTGGGTTCTATATTGAGGATTCGCAGTGAAGCGACAGCTGCTATTCATTCTTTCTTTAAGGACAGTGGCTT TGTACATATTCATACTCCAATAATCACATCCAATGACTCTGAGGGAGCTGGAGAACTTTTTCAACTTGAACCTTCAGGCAAACTTAAGGT ACCTGAGGAGAATTTCTTCAATGTTCCTGCTTTCTTAACTGTCTCAGGACAACTTCATCTAGAAGTGATGTCAGGAGAGCTATTTGTCCA AGAACTCTGAAGATGATGAGCTAGCTAAAGAATCAAAGCGGTCAGTTCGAAAGCGGGGCCGAAGCACAGACGAGTATTCAGAAGCAGATG AGGAGGAGGAGGAAGAGGAAGGCAAACCATCCCGCAAACGGCTACACCGGATTGAGACGGATGAGGAGGAGAGTTGTGACAATGCTCATG GAGATGCAAATCAGCCTGCCCGTGACAGCCAGCCTAGGGTCCTGCCCTCAGAACAAGAGAGCACCAAGAAGCCCTACCGGATAGAAAGTG ATGAGGAAGAGGACTTTGAAAATGTAGGCAAAGTGGGGAGCCCATTGGACTATAGCTTAGTGGACTTACCTTCAACCAATGGACAGAGCC CTGGCAAAGCCATTGAGAACTTGATTGGCAAGCCTACTGAGAAGTCTCAGACCCCCAAGGACAACAGCACAGCCAGTGCAAGCCTAGCCT CCAATGGGACAAGTGGTGGGCAGGAGGCAGGAGCACCAGAAGAGGAGGAAGATGAGCTTTTGAGAGTGACTGACCTTGTTGATTATGTCT GTAACAGTGAACAGTTATAAGACTTTTTTTCCATTTTTGTGCTAATTTATTCCACGGTAGCTCTCACACCAGCGGGCCAGTTATTAAAAG CTGTTTAATTTTTCCTAGAAAACTCCACTACAGAATGACTTTTAGAAGAAAAATTTCAACAAATCCTGAAGTCTTTCTGTGAAGTGACCA GTTCTGAACTTTGAAGATAAATAATTGCTGTAAATTCCTTTTGATTTTCTTTTTCCAGGTTCATGGTCCTTGGTAATTTCATTCATGGAA AAAAATCTTATTATAATAACAACAAAGATTTGTATATTTTTGACTTTATATTTCCTGAGCTCTCCTGACTTTGTGAAAAAGGGTGGATGA AAATGCATTCCGAATCTGTGAGGGCCCAAAACAGAATTTAGGGGTGGGTGAAAGCACTTGTGCTTTAGCTTTTTCATATTAAATATATAT TATATTTAAACATTCATGGCATAGATGATGATTTACAGACAATTTAAAAGTTCAAGTCTGTACTGTTACAGTTTGAGAATTGTAGATAAC ATCATACATAAGTCATTTAGTAACAGCCTTTGTGAAATGAACTTGTTTACTATTGGAGATAACCACACTTAATAAAGAAGAGACAGTGAA >In-frame_NARS2_ENST00000528850_chr11_78239888_-_RSF1_ENST00000308488_chr11_77378536_-_8441nt AGGGTCTAGCTCTGTCACCCAGACTGGAGCGCAGTGATGTGATCTCAGATGACTACAACCTCCATCTCCCAGGCTCAAGCAATCCTCCTG CCTCGGCCTCCAGAGTAGCTGAAACTATAGGCATGCACCACCACACTCTATAATTTTTTAAGTTTTTTGTGAAGATGAGTCTCACTGTAT TGCCCAGGCTGGTCTCAAACTCCTGGACTCAAGCAGTCCTCCTCCTTCGGCATCCCAAAATGCTGGGATTACAGGCATAAGCCTGGTAGA TGTTGTTATAATAAATACTTATTTTTTGAGTAGGTTCTTGCTTTGTCACCCATGATTGTACTGACACAGTCATGGCTTGCCGTTGCAGTG ATTTCTGTTGTCCTCACATATCCTTTACTTTTTAGCGGGATGGATTCGTTCTGTCCGATCCCAGAAGGAAGTCTTGTTCCTGCATGTAAA TGATGGGTCATCTTTGGAAAGCCTTCAGGTTGTTGCAGATTCAGGCCTTGACAGTAGAGAATTAAATTTTGGGAGTTCTGTGGAAGTACA AGGGCAGCTGATAAAAAGTCCATCCAAAAGGCAAAATGTGGAACTGAAGGCAGAAAAAATTAAAGTTATTGGAAATTGTGATGCCAAGGA TTTCCCCATCAAATATAAAGAGAGGCATCCTCTGGAGTATCTGCGACAATATCCTCACTTTAGGTGTAGGACTAACGTTCTGGGTTCTAT ATTGAGGATTCGCAGTGAAGCGACAGCTGCTATTCATTCTTTCTTTAAGGACAGTGGCTTTGTACATATTCATACTCCAATAATCACATC CAATGACTCTGAGGGAGCTGGAGAACTTTTTCAACTTGAACCTTCAGGCAAACTTAAGGTACCTGAGGAGAATTTCTTCAATGTTCCTGC TTTCTTAACTGTCTCAGGACAACTTCATCTAGAAGTGATGTCAGGAGAGCTATTTGTCCAAGAACTCTGAAGATGATGAGCTAGCTAAAG AATCAAAGCGGTCAGTTCGAAAGCGGGGCCGAAGCACAGACGAGTATTCAGAAGCAGATGAGGAGGAGGAGGAAGAGGAAGGCAAACCAT CCCGCAAACGGCTACACCGGATTGAGACGGATGAGGAGGAGAGTTGTGACAATGCTCATGGAGATGCAAATCAGCCTGCCCGTGACAGCC AGCCTAGGGTCCTGCCCTCAGAACAAGAGAGCACCAAGAAGCCCTACCGGATAGAAAGTGATGAGGAAGAGGACTTTGAAAATGTAGGCA AAGTGGGGAGCCCATTGGACTATAGCTTAGTGGACTTACCTTCAACCAATGGACAGAGCCCTGGCAAAGCCATTGAGAACTTGATTGGCA AGCCTACTGAGAAGTCTCAGACCCCCAAGGACAACAGCACAGCCAGTGCAAGCCTAGCCTCCAATGGGACAAGTGGTGGGCAGGAGGCAG GAGCACCAGAAGAGGAGGAAGATGAGCTTTTGAGAGTGACTGACCTTGTTGATTATGTCTGTAACAGTGAACAGTTATAAGACTTTTTTT CCATTTTTGTGCTAATTTATTCCACGGTAGCTCTCACACCAGCGGGCCAGTTATTAAAAGCTGTTTAATTTTTCCTAGAAAACTCCACTA CAGAATGACTTTTAGAAGAAAAATTTCAACAAATCCTGAAGTCTTTCTGTGAAGTGACCAGTTCTGAACTTTGAAGATAAATAATTGCTG TAAATTCCTTTTGATTTTCTTTTTCCAGGTTCATGGTCCTTGGTAATTTCATTCATGGAAAAAAATCTTATTATAATAACAACAAAGATT TGTATATTTTTGACTTTATATTTCCTGAGCTCTCCTGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAGGGCCCAAA ACAGAATTTAGGGGTGGGTGAAAGCACTTGTGCTTTAGCTTTTTCATATTAAATATATATTATATTTAAACATTCATGGCATAGATGATG ATTTACAGACAATTTAAAAGTTCAAGTCTGTACTGTTACAGTTTGAGAATTGTAGATAACATCATACATAAGTCATTTAGTAACAGCCTT TGTGAAATGAACTTGTTTACTATTGGAGATAACCACACTTAATAAAGAAGAGACAGTGAAAGTACCATCATAATTAACCTAAATTTTTGT TATAGCAGAGTTTCTTGTTTAAAAAAAAATAAAATCATCTGAAAAGCATTTGTACAGTAAAATGTATAATGAAGCTTTGCCAACCAGACT GTGCTAGCAACAAATTTTTTTAAATAAGCTTTATGCAGTGGTAATAAGGTGGCCTCAAATATATTGTGTCTGATGGAGAGTTATTAGTGA AATGAATGTGGTCTTTCTTAAGGCCTGGGTGGACTGTAAACTTTGCCAATAGTATAACTCTTGTCTTCTGGCCACTTGATGTTTAAATAT CTGAAATATCATTTTGAAAAAAATACATCTATATATAACATACATGAAGAGATGCTAAGCTGACAGTGATATTTTAGCACATTTGAAGAC TGGGAAGAGATTTTCAGGTGAATTTTAACTGGTCTATTCTTGCCCTTAGTATCTACTTCAAATTGAAGTCTACAAACAAAGCAGTTCCTT TGGGAGGTTTTTAGTTTGAGTTTTAGCGTGTGTGTGTGTTTGTGTGTGTGCGTGTGCGTGTGTGTGTGTGTTGGAATTTCCTATCTGCCT GGATATATTAGCAGAGTTTGAATGTAGTTTTGGCCTTTGGCCATTAGACTTCTATTAAAATTCATTAATAGTCATACAACCAACATAGAG TTGAATGAGAACTGCCGATGTAATTAATAGGCATGACATCCATTTCAAACATCTCAACACTTTAAAGAAAAGCCCTTTGTTTCAAGAAAA AAGGGTTTGTAACTAACTAAATACCTAACATGTAATTGACACTAAAATATGAACTTTGTCTTATTTAGTTTCTGTTATAGCTGTAAAATT TCAGGCAGAGCCATAACATTGTACAGAGTGTAGCACTTGTGATTAAACCTAGCCTGTTAAATCCTGAAACCTTCAACCATTACTTCTGTG AATACTTTAGCCCTGGGATTTGGGTTTTTCTGTTCCGGTGTTGTGTCTGTTGCCGGCAATGGACACACCATATCTGCTGCTGGCCCAAGG AACGTCATTAATTTTTCTTTCCAAATTAAGTATTATGTGCTAGTCAGTGTATAGTAAAGCACTTCTCTTTTTTATTACTAAAAAGCTGGC ATTAGATTTGCATTATAAATACCTCTCTAGGAACTTTATACTCCTTTTCCTTCTTCAACAGGTATTGCCCTTAAATCTTATCTTTTGGCC TTGAAAGTTTATAGCTATTGTTTTTCAGTTGTTCGTTGTTTTGTTTTGTTTCACTTTAGTTCTGTAGTACCTGCCCATTAATATTTTTGC TTTGATTCTAGCAATGTGTATGTATCTGTATAAAAAATAAAATAATGAAAGCAACCTAAAAATAGGATGCACCAATAGCATGTGGTTCCA AGTAAGTTGTGATTTTTATTTTGAGACAGTGTTCCACTGGAAGGGAGGGAAGGGCTTACATTCACAGACAGTAAAGCAGGGCTGTGTAAG GAGCTACATTTACTTAACAGTCTCCTTTCCAGCTAGGTTTGTTTTATTTATTTGCAAGTCAGCTAAGAATTAACCTTTTAAACCATCTAA AACAGGCAAGCAATATAAAGATTTCTACTAGTGCAAGGTAAGTGGTTTGAATATACAAGTGCCCTTTCCTGCCACCCAGTCTCACTACCG TTTTAGTCCTGCAGCTGGGTAAAGCCACTATTGTGTGGAAACTCTCCCATGTGCCCTGTCTCTACCTCTGGACACACCAGCTCCTTCTTC CACCTATTCTATTCCTCAGTTAAGCCAAGTGATCAGAAGTAGTATTAAATGGGTAGATAATTTTAACAGGATGCCTAATGTGAAATAAGG AGTTATTTTTACTCTTCTACTATAGAAAGCCTAAGGTAATTCTTACCATCTCAAAGACTGAGTATTCCATTTAGGTTTGGAGACCACTTG TGCTGTGCTGCCTGATATTTACCAAACTTGAATAAGTGTTCGTCAACTTGATAGTGAATGTACCCCTTCTCACCTTATATTTTGATTAAA TCAATTAACTATAGGTCATCTACCAAGAATGTAATCCAAGCGGTTGATAAAACATTATTAGGCAGATAGATTATTGATTATTAAATTTTG AGCAGTGCAAAAACGGTTTTGCTGCTTGGAGTTCAGATTCAGTCCCTCAAAGAGTTTATGATCACTGAAATACACTCTGAAGGTATTCTG AAGAAGTTAAAAAATTTTAGAAAACGAAATGTTCTGTATACAAAGACAATACAGTCACTACGAACTGCAGAAAGTATAGGAAAGCAGTAA TTGATGTAGAGTTTAGACAGTCTTGGATCTTTTTTAGAGCACTAACCATGGATTTAGACTCAAAATAGCTGCTACATAATAGAGCCCTTT AATAATTTAAACCCCCCTTGTTGAAATACAAGTTGGACTCCCAGTGTCAAACTCTAGACTGTAGCTAATGTATTAAAGGGAGATGTAGAT TAATATTCAGTATATTTAGTTTGCAATTTCTGAAAAGGTTTGAAAACTAGTCAGCTTTTCACACAGCAGAAGCTTTGAACTGAAATATGT GTGAAAAGGACGCAGACTGAAAACGTTTTGGTTTTGTACATCAGTGCTGATGAAATTAGTGTAAAACATTTTCCATCATTGGCACATTAC TGCAAAATGATGGCAGAGATATTTTCAAGAATGTACATCAAGTTATATTTCCTTGACATCCTTTTTTCAATTGGTCAAGGTTACAGATTC AGAGGATAAAGGGTAGTTTCATTTAGAATAAATTCATGTCTACTGGCAATCTATATATAAAAGTGACCTGCCCAAGAACCAAAAACTTTA AATGCTAATGAAGCTTTTGAAAAATAATTTTTAAACAAATTAATTTTAAAAGGGTGTTACACGTACCCAGTTTTTACTTTTTAGTTGATG AAACCCATCCTATAATATACATTTGAGCAAAGTACACATATTAAGAAAAACATGGACATTTACTTGTTTAATAGTCAAAATGATGAGGAA ATGTTAGCTGTTTTTAAGTGGGACTGGTGGGGTGTCCTTTGTCACAAGGAATGCTTTTTTAGCTTGTTTGTGGGCATAAGAGATGTTAAC CCTTTGCTGATTCTACCACACAACTGTAAAGAACCTAATGAATCTACAAGTTTAATATTCAGAAAAAGCTAGGAACTCCGCTCTTTACCA GTACAGTGGAACAGGCCCGTTATTCAAGGTGATGCCTCACAGCTATAGAACAACTATTCAAAGACCCAGAGTTAAATGGTACATGTGTAT ATGTGTGTGTGTGTGTGCACACGCACACACTTCAGATAAGTATCAGAAAAAATAAAAATGAATCCATCATTAACTTGAAAGAAATAAGAT GGCTGCATTGCAACAGATACAAATATTATGAACATCATTTAATTACAGAAAATCTAGACAACAGTTTCTCCTGATGTTTGACATTCTCAA AATATATTCCTCATTCTCGAAGAAGCAGAGAATGCCAAGGCTGCATATCTGCTGTAATCTACCTAGCCCTCTTCTGCTTAATATGATCCA TTATTGAATCTTCTCAGATTAAAATCCATTCCTATATCATCTACCTTTCCCAAAGTGTGTGCCTGTAAACCTACCTTGGAAGTGGCAAGT TAACTGATTTTTTTGTGTCATTTTTATACCAATCCTTAAGGTCAAAGCCTTTTGCTATCAATGTATTTAAACTGAGTTGCTATATGTTCA CTAATTTGTTTTCAAAATGTTTTGCTCCAACTTAAATTATCTTTTAACATCTTTTGAGTGCCAAGAATTGCTAAGTAACTGTAATATGTT GAAGAGAGTAATTGCCAAGCAAGCAGTCATAAGCCAAAATGTAATGAGCTTAGTATATAACCACTTTAGAGTATACACTCACCACTTTTT GTATTCATTCATGCAAACCCTCCTGGAAGTCGATTAGAAGAGGATCCAATTTGTGGACCTTTTTTCCTCCTTTTGGACACCTGAGCACAA TTTTTTTTTTCCTTTCATATTTATACCACTTTGGAAAATTCAGTAAACCCAATTCTGGCACATCATAATGGTTTCAGTTAGTGAAGATGT TTATTTTAATAACTTTAAAATATGACTATCCTATACATAAGTTATATAAGAGGGCATAACAATAGATGAGTAGAAATTTATAAAATTTCT TGGATATTTTGAATGAGAAAAAAACATTTTTAAAGGAATTTTGTTTTTTCCTTTTTTGGCCAAACCGGTACAAGTTAGAAAGTGTGCTAA GGACTGAATACTTGCCTCGTGCTTTTTGCCACTGGATGATGTAAGTTAAGAATGGAATTGTTAATCCTAAGTATATATTTTCTTGACTTT CATCAGTTTCTAAAGAAATCTAATTTAAGTGTTTTGCGGTTTTGTTTGATCTGTATTTATTGAGTTCTGGTCATAGACCAGCAGCTTGCA CGTCATGCTCATGAACAGCCAGAACATAGTTATTGGGGAACTTCATGGCTCAAAACCTTCTGAATCATTTAACTTATTTTGTATGTTGCA AAAAAAAAAAAAAAGTTTATTTTGCTTGAGAGTCACCTTTTTTTAAAAAAAATAACTGTACAGCTTTTAAGGGATGGGAGGTGGGAAAAT ACCCTAAAATAGGATGTAGATTTTTTACAATTGTGTTTATGCTAGATCATCTACAGGTGCATTATGTAATTAAACCTAAAATTGTTTAAA AATTTGTGCCATGTCTTTTTCATTCTCCTGCCCTTTAGCAGAATTGGTGCATGTCAACTGCTATGTGGACAAGCCTTGAAATTAGAGTAA CAAGCCCTGTCTCCAAAGCTTTAAGGTCACTGCATGAAAATTGCACACACACACACACACACACACACATCTAGCTTATATTAGTAAATG GATTTTCAGGATCAGAACAGCTACAGTAGCCCAGATTTGGCTGTTAACAGCATATTCTTACAGCACATGATTTTTGTGATGCCTAACTAG GGTATTCTCAATGTTAGTCTGGTGTTCTATTCTCTTTCAAAGTAGCTTCTTGAGATGGTATCTGTTGTAGCTTGCCCAAACCTGCCATGA GGTTGTGTGTACACTTTGAAAGGGTATGTCCTATGCTAAGATGGTGGTAGAGCAGGGCTTGATTTTAATCTATTCATATAAAAGAAGGAA AAAACTAGAATTGGTCTATTTGGTTATTCAGTGGACTTAATTCCACAGGAATAGTTGTCTGCTGAAGCGTGGCAGCAAGAGAAGTCAAAT TCAAGTTTCAGTTCCTTCCTTATTCACTAAGTATTTTGAAATCTTGTAGAACTTCTGATTCTAGCACAGTCTTTTACATGGCACATTTTA CCATGGTATATTCACAGCTTCGTTTAAATGTCAGTACTTTTTCCCATCTGATAATTTTGCCATTCTAATTTCTCACCTTTGTAGTACAAG TGTATTCTTGAAAATAATTAAATTCATCTAAGTGTGTCATAATTTCAATCAAAGCTATATTCATGTGTTGCCAGCGTCAGTTTTTTGCTA TCCTCATTCAGAAGGGAAGCCTGCAGATCATGAGTTTCCATATGAAGAATACAAATTCCACATAAAAATTTATAAATGGTATCTTTAGAA TTTTGATTTAAAGTAATAGCTGGAATTCAGGGACTGATCAGAATGCCTCTTGAATTTTCCAACATGCTTATATGAAATGCTTTATTTTCC TATGCGTTAAAAAAAATATTCCTGGAATAGGTTCTCAGAATGTTTTATTTGGTTTCTAGGAGATGAGATTTAAAGCAGAAGCTCCAAGAT TGGCATAAAACTAACTCTTGAGGTAATCAGGACCATGCTGTTAGTCAAATAGAAGCTGGAGTGCTCTCTGTCACATAATGTACTGCATGT GTGTGGGGGTGGGGGGGCAGGGAAGATCAGAAAACTGGAAATGTAATTCTGATAACACGCAAAGTAAATTGTGCATTAAAAGTATGGGAA TTCTTGGTAGCTTAAAGCTTCAGGGGTTAACTTCAGTGTATGAACACCTAGTGTGTTAGAATTGCAGTGCATAGTTGTTTAAATACAATA TTCCTTGTAAGTGACAACCAAAATATGTTGTGGCTGGTGCCAGTATTTTTGTTAATGAAATGTTCAGTGTCTCACTACAGTCTGATCAGA ACTCTTGGTGTTATAAGCCAGGCCTAAAGCCATTTTATAGCTATTGGCCTAATTGTGTAACTTTTTCTTTCAAAATGTTTTATTATAATA >In-frame_NARS2_ENST00000528850_chr11_78239888_-_RSF1_ENST00000360355_chr11_77378536_-_2207nt AGGGTCTAGCTCTGTCACCCAGACTGGAGCGCAGTGATGTGATCTCAGATGACTACAACCTCCATCTCCCAGGCTCAAGCAATCCTCCTG CCTCGGCCTCCAGAGTAGCTGAAACTATAGGCATGCACCACCACACTCTATAATTTTTTAAGTTTTTTGTGAAGATGAGTCTCACTGTAT TGCCCAGGCTGGTCTCAAACTCCTGGACTCAAGCAGTCCTCCTCCTTCGGCATCCCAAAATGCTGGGATTACAGGCATAAGCCTGGTAGA TGTTGTTATAATAAATACTTATTTTTTGAGTAGGTTCTTGCTTTGTCACCCATGATTGTACTGACACAGTCATGGCTTGCCGTTGCAGTG ATTTCTGTTGTCCTCACATATCCTTTACTTTTTAGCGGGATGGATTCGTTCTGTCCGATCCCAGAAGGAAGTCTTGTTCCTGCATGTAAA TGATGGGTCATCTTTGGAAAGCCTTCAGGTTGTTGCAGATTCAGGCCTTGACAGTAGAGAATTAAATTTTGGGAGTTCTGTGGAAGTACA AGGGCAGCTGATAAAAAGTCCATCCAAAAGGCAAAATGTGGAACTGAAGGCAGAAAAAATTAAAGTTATTGGAAATTGTGATGCCAAGGA TTTCCCCATCAAATATAAAGAGAGGCATCCTCTGGAGTATCTGCGACAATATCCTCACTTTAGGTGTAGGACTAACGTTCTGGGTTCTAT ATTGAGGATTCGCAGTGAAGCGACAGCTGCTATTCATTCTTTCTTTAAGGACAGTGGCTTTGTACATATTCATACTCCAATAATCACATC CAATGACTCTGAGGGAGCTGGAGAACTTTTTCAACTTGAACCTTCAGGCAAACTTAAGGTACCTGAGGAGAATTTCTTCAATGTTCCTGC TTTCTTAACTGTCTCAGGACAACTTCATCTAGAAGTGATGTCAGGAGAGCTATTTGTCCAAGAACTCTGAAGATGATGAGCTAGCTAAAG AATCAAAGCGGTCAGTTCGAAAGCGGGGCCGAAGCACAGACGAGTATTCAGAAGCAGATGAGGAGGAGGAGGAAGAGGAAGGCAAACCAT CCCGCAAACGGCTACACCGGATTGAGACGGATGAGGAGGAGAGTTGTGACAATGCTCATGGAGATGCAAATCAGCCTGCCCGTGACAGCC AGCCTAGGGTCCTGCCCTCAGAACAAGAGAGCACCAAGAAGCCCTACCGGATAGAAAGTGATGAGGAAGAGGACTTTGAAAATGTAGGCA AAGTGGGGAGCCCATTGGACTATAGCTTAGTGGACTTACCTTCAACCAATGGACAGAGCCCTGGCAAAGCCATTGAGAACTTGATTGGCA AGCCTACTGAGAAGTCTCAGACCCCCAAGGACAACAGCACAGCCAGTGCAAGCCTAGCCTCCAATGGGACAAGTGGTGGGCAGGAGGCAG GAGCACCAGAAGAGGAGGAAGATGAGCTTTTGAGAGTGACTGACCTTGTTGATTATGTCTGTAACAGTGAACAGTTATAAGACTTTTTTT CCATTTTTGTGCTAATTTATTCCACGGTAGCTCTCACACCAGCGGGCCAGTTATTAAAAGCTGTTTAATTTTTCCTAGAAAACTCCACTA CAGAATGACTTTTAGAAGAAAAATTTCAACAAATCCTGAAGTCTTTCTGTGAAGTGACCAGTTCTGAACTTTGAAGATAAATAATTGCTG TAAATTCCTTTTGATTTTCTTTTTCCAGGTTCATGGTCCTTGGTAATTTCATTCATGGAAAAAAATCTTATTATAATAACAACAAAGATT TGTATATTTTTGACTTTATATTTCCTGAGCTCTCCTGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAGGGCCCAAA ACAGAATTTAGGGGTGGGTGAAAGCACTTGTGCTTTAGCTTTTTCATATTAAATATATATTATATTTAAACATTCATGGCATAGATGATG ATTTACAGACAATTTAAAAGTTCAAGTCTGTACTGTTACAGTTTGAGAATTGTAGATAACATCATACATAAGTCATTTAGTAACAGCCTT TGTGAAATGAACTTGTTTACTATTGGAGATAACCACACTTAATAAAGAAGAGACAGTGAAAGTACCATCATAATTAACCTAAATTTTTGT |
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FusionGenePPI for NARS2_RSF1 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
NARS2 | SLC25A41, OXLD1, DARS2, ADRBK1, CHCHD2, RAB8B, PDK4, LAMP3, NDUFS7, HSPD1, ACSM5, TRNT1, CD70, YBEY, TMEM70, NIT1, GATC, CLEC2D, FOXRED1, OTC, BPNT1, CHRM3 | RSF1 | NFKB1, SMARCA5, CENPA, SIRT7, SP1, COPS6, CSNK2A1, HIST1H2BG, HIST1H3A, EWSR1, MARK2, ATXN3, KAT6A, MCM2 |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for NARS2_RSF1 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for NARS2_RSF1 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | NARS2 | C0023264 | Leigh Disease | 1 | UNIPROT |
Hgene | NARS2 | C4015643 | COMBINED OXIDATIVE PHOSPHORYLATION DEFICIENCY 24 | 1 | ORPHANET;UNIPROT |