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Center for Computational Systems Medicine
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FusionGeneSummary

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FusionProtFeature

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FusionGeneSequence

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FusionGenePPI

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Fusion gene ID: 2343

FusionGeneSummary for ARFGEF1_PPP1R42

check button Fusion gene summary
Fusion gene informationFusion gene name: ARFGEF1_PPP1R42
Fusion gene ID: 2343
HgeneTgene
Gene symbol

ARFGEF1

PPP1R42

Gene ID

10565

286187

Gene nameADP ribosylation factor guanine nucleotide exchange factor 1protein phosphatase 1 regulatory subunit 42
SynonymsARFGEP1|BIG1|P200LRRC67|TLLR|TLRR|dtr
Cytomap

8q13.2

8q13.1

Type of geneprotein-codingprotein-coding
Descriptionbrefeldin A-inhibited guanine nucleotide-exchange protein 1ADP-ribosylation factor guanine nucleotide-exchange factor 1 (brefeldin A-inhibited)p200 ARF guanine nucleotide exchange factorprotein phosphatase 1 regulatory subunit 42leucine rich repeat containing 67leucine-rich repeat-containing protein 67testis leucine-rich repeat
Modification date2018052320180408
UniProtAcc

Q9Y6D6

Q7Z4L9

Ensembl transtripts involved in fusion geneENST00000520381, ENST00000262215, 
ENST00000517955, ENST00000518230, 
ENST00000522909, ENST00000324682, 
ENST00000517834, 
Fusion gene scores* DoF score8 X 7 X 5=2803 X 3 X 3=27
# samples 93
** MAII scorelog2(9/280*10)=-1.63742992061529
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
log2(3/27*10)=0.15200309344505
effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs).
DoF>8 and MAII>0
Context

PubMed: ARFGEF1 [Title/Abstract] AND PPP1R42 [Title/Abstract] AND fusion [Title/Abstract]

Functional or gene categories assigned by FusionGDB annotation
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgeneARFGEF1

GO:0034260

negative regulation of GTPase activity

15644318


check button Fusion gene information from three resources
(ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018))
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
Data typeSourceCancer typeSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
TCGALDUCSTCGA-N8-A4PI-01AARFGEF1chr8

68163534

-PPP1R42chr8

67926827

-
* LD: Li Ding group's fusion gene list
  RV: Roel Verhaak group's fusion gene list
  ChiTaRs fusion database

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
In-frameENST00000520381ENST00000522909ARFGEF1chr8

68163534

-PPP1R42chr8

67926827

-
In-frameENST00000520381ENST00000324682ARFGEF1chr8

68163534

-PPP1R42chr8

67926827

-
5CDS-intronENST00000520381ENST00000517834ARFGEF1chr8

68163534

-PPP1R42chr8

67926827

-
In-frameENST00000262215ENST00000522909ARFGEF1chr8

68163534

-PPP1R42chr8

67926827

-
In-frameENST00000262215ENST00000324682ARFGEF1chr8

68163534

-PPP1R42chr8

67926827

-
5CDS-intronENST00000262215ENST00000517834ARFGEF1chr8

68163534

-PPP1R42chr8

67926827

-
intron-3CDSENST00000517955ENST00000522909ARFGEF1chr8

68163534

-PPP1R42chr8

67926827

-
intron-3CDSENST00000517955ENST00000324682ARFGEF1chr8

68163534

-PPP1R42chr8

67926827

-
intron-intronENST00000517955ENST00000517834ARFGEF1chr8

68163534

-PPP1R42chr8

67926827

-
intron-3CDSENST00000518230ENST00000522909ARFGEF1chr8

68163534

-PPP1R42chr8

67926827

-
intron-3CDSENST00000518230ENST00000324682ARFGEF1chr8

68163534

-PPP1R42chr8

67926827

-
intron-intronENST00000518230ENST00000517834ARFGEF1chr8

68163534

-PPP1R42chr8

67926827

-

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FusionProtFeatures for ARFGEF1_PPP1R42


check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
ARFGEF1

Q9Y6D6

PPP1R42

Q7Z4L9

Promotes guanine-nucleotide exchange on ARF1 and ARF3.Promotes the activation of ARF1/ARF3 through replacement of GDPwith GTP. Involved in vesicular trafficking. Required for themaintenance of Golgi structure; the function may be independent ofits GEF activity. Required for the maturaion of integrin beta-1 inthe Golgi. Involved in the establishment and persistence of cellpolarity during directed cell movement in wound healing. Proposedto act as A kinase-anchoring protein (AKAP) and may mediatecrosstalk between Arf and PKA pathways. Inhibits GAP activity ofMYO9B probably through competetive RhoA binding. The function inthe nucleus remains to be determined.{ECO:0000269|PubMed:12571360, ECO:0000269|PubMed:15644318,ECO:0000269|PubMed:17227842, ECO:0000269|PubMed:20360857,ECO:0000269|PubMed:22084092}. Regulates phosphatase activity of protein phosphatase 1(PP1) complexes in the testis. {ECO:0000250|UniProtKB:Q8R1Z4}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page

.

* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
>>>>>>>
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneARFGEF1chr8:68163534chr8:67926827ENST00000262215-1939709_8409501850DomainSEC7
HgeneARFGEF1chr8:68163534chr8:67926827ENST00000262215-1939711_7159501850MotifNote=Nuclear localization signal (NLS)
TgenePPP1R42chr8:68163534chr8:67926827ENST00000324682-16204_24243229DomainNote=LRRCT
TgenePPP1R42chr8:68163534chr8:67926827ENST00000324682-16117_13843229RepeatNote=LRR 5
TgenePPP1R42chr8:68163534chr8:67926827ENST00000324682-16147_16843229RepeatNote=LRR 6
TgenePPP1R42chr8:68163534chr8:67926827ENST00000324682-16169_19043229RepeatNote=LRR 7
TgenePPP1R42chr8:68163534chr8:67926827ENST00000324682-1651_7243229RepeatNote=LRR 2
TgenePPP1R42chr8:68163534chr8:67926827ENST00000324682-1673_9443229RepeatNote=LRR 3
TgenePPP1R42chr8:68163534chr8:67926827ENST00000324682-1695_11643229RepeatNote=LRR 4

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
TgenePPP1R42chr8:68163534chr8:67926827ENST00000324682-1629_5043229RepeatNote=LRR 1


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FusionGeneSequence for ARFGEF1_PPP1R42


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences.
(nt: nucleotides, aa: amino acids)

* Fusion amino acid sequences.
>In-frame_ARFGEF1_ENST00000520381_chr8_68163534_-_PPP1R42_ENST00000522909_chr8_67926827_-_671aa
MVIQTLTRICADAQSVVDIYVNYDCDLNAANIFERLVNDLSKIAQGRGSQELGMSNVQELSLRKKGLECLVSILKCMVEWSKDQYVNPNS
QTTLGQEKPSEQEMSEIKHPETINRYGSLNSLESTSSSGIGSYSTQMSGTDNPEQFEVLKQQKEIIEQGIDLFNKKPKRGIQYLQEQGML
GTTPEDIAQFLHQEERLDSTQVGEFLGDNDKFNKEVMYAYVDQHDFSGKDFVSALRMFLEGFRLPGEAQKIDRLMEKFAARYLECNQGQT
LFASADTAYVLAYSIIMLTTDLHSPQVKNKMTKEQYIKMNRGINDSKDLPEEYLSAIYNEIAGKKISMKETKELTIPTKSSKQNVASEKQ
RRLLYNLEMEQMAKTAKALMEAVSHVQAPFTSATHLEHVRPMFKEDLSLCKNLSVLYLYDNCISQITNLNYATNLTHLYLQNNCISCIEN
LRSLKKLEKLYLGGNYIAVIEGLEGLGELRELHVENQRLPLGEKLLFDPRTLHSLAKSLCILNISNNNIDDITDLELLENLNQLIAVDNQ
LLHVKDLEFLLNKLMKLWKIDLNGNPVCLKPKYRDRLILVSKSLEFLDGKEIKNIERQFLMNWKASKDAKKISKKRSSKNEDASNSLISN

>In-frame_ARFGEF1_ENST00000520381_chr8_68163534_-_PPP1R42_ENST00000324682_chr8_67926827_-_590aa
MVIQTLTRICADAQSVVDIYVNYDCDLNAANIFERLVNDLSKIAQGRGSQELGMSNVQELSLRKKGLECLVSILKCMVEWSKDQYVNPNS
QTTLGQEKPSEQEMSEIKHPETINRYGSLNSLESTSSSGIGSYSTQMSGTDNPEQFEVLKQQKEIIEQGIDLFNKKPKRGIQYLQEQGML
GTTPEDIAQFLHQEERLDSTQVGEFLGDNDKFNKEVMYAYVDQHDFSGKDFVSALRMFLEGFRLPGEAQKIDRLMEKFAARYLECNQGQT
LFASADTAYVLAYSIIMLTTDLHSPQVKNKMTKEQYIKMNRGINDSKDLPEEYLSAIYNEIAGKKISMKETKELTIPTKSSKQNVASEKQ
RRLLYNLEMEQMAKTAKALMEAVSHVQAPFTSATHLEHVRPMFKEDLSLCKNLSVLYLYDNCISQITNLNYATNLTHLYLQNNCISCIEN
LRSLKKLEKLYLGGNYIAVIEGLEGLGELRELHVENQRLPLGEKLLFDPRTLHSLAKSLCILNISNNNIDDITDLELLENLNQLIAVDNQ

>In-frame_ARFGEF1_ENST00000262215_chr8_68163534_-_PPP1R42_ENST00000522909_chr8_67926827_-_1217aa
MYEGKKTKNMFLTRALEKILADKEVKKAHHSQLRKACEVALEEIKAETEKQSPPHGEAKAGSSTLPPVKSKTNFIEADKYFLPFELACQS
KCPRIVSTSLDCLQKLIAYGHLTGNAPDSTTPGKKLIDRIIETICGCFQGPQTDEGVQLQIIKALLTAVTSQHIEIHEGTVLQAVRTCYN
IYLASKNLINQTTAKATLTQMLNVIFARMENQALQEAKQMEKERHRQHHHLLQSPVSHHEPESPQLRYLPPQTVDHISQEHEGDLDLHTN
DVDKSLQDDTEPENGSDISSAENEQTEADQATAAETLSKNEVLYDGENHDCEEKPQDIVQNIVEEMVNIVVGDMGEGTTINASADGNIGT
IEDGSDSENIQANGIPGTPISVAYTPSLPDDRLSVSSNDTQESGNSSGPSPGAKFSHILQKDAFLVFRSLCKLSMKPLSDGPPDPKSHEL
RSKILSLQLLLSILQNAGPIFRTNEMFINAIKQYLCVALSKNGVSSVPEVFELSLSIFLTLLSNFKTHLKMQIEVFFKEIFLYILETSTS
SFDHKWMVIQTLTRICADAQSVVDIYVNYDCDLNAANIFERLVNDLSKIAQGRGSQELGMSNVQELSLRKKGLECLVSILKCMVEWSKDQ
YVNPNSQTTLGQEKPSEQEMSEIKHPETINRYGSLNSLESTSSSGIGSYSTQMSGTDNPEQFEVLKQQKEIIEQGIDLFNKKPKRGIQYL
QEQGMLGTTPEDIAQFLHQEERLDSTQVGEFLGDNDKFNKEVMYAYVDQHDFSGKDFVSALRMFLEGFRLPGEAQKIDRLMEKFAARYLE
CNQGQTLFASADTAYVLAYSIIMLTTDLHSPQVKNKMTKEQYIKMNRGINDSKDLPEEYLSAIYNEIAGKKISMKETKELTIPTKSSKQN
VASEKQRRLLYNLEMEQMAKTAKALMEAVSHVQAPFTSATHLEHVRPMFKEDLSLCKNLSVLYLYDNCISQITNLNYATNLTHLYLQNNC
ISCIENLRSLKKLEKLYLGGNYIAVIEGLEGLGELRELHVENQRLPLGEKLLFDPRTLHSLAKSLCILNISNNNIDDITDLELLENLNQL
IAVDNQLLHVKDLEFLLNKLMKLWKIDLNGNPVCLKPKYRDRLILVSKSLEFLDGKEIKNIERQFLMNWKASKDAKKISKKRSSKNEDAS

>In-frame_ARFGEF1_ENST00000262215_chr8_68163534_-_PPP1R42_ENST00000324682_chr8_67926827_-_1136aa
MYEGKKTKNMFLTRALEKILADKEVKKAHHSQLRKACEVALEEIKAETEKQSPPHGEAKAGSSTLPPVKSKTNFIEADKYFLPFELACQS
KCPRIVSTSLDCLQKLIAYGHLTGNAPDSTTPGKKLIDRIIETICGCFQGPQTDEGVQLQIIKALLTAVTSQHIEIHEGTVLQAVRTCYN
IYLASKNLINQTTAKATLTQMLNVIFARMENQALQEAKQMEKERHRQHHHLLQSPVSHHEPESPQLRYLPPQTVDHISQEHEGDLDLHTN
DVDKSLQDDTEPENGSDISSAENEQTEADQATAAETLSKNEVLYDGENHDCEEKPQDIVQNIVEEMVNIVVGDMGEGTTINASADGNIGT
IEDGSDSENIQANGIPGTPISVAYTPSLPDDRLSVSSNDTQESGNSSGPSPGAKFSHILQKDAFLVFRSLCKLSMKPLSDGPPDPKSHEL
RSKILSLQLLLSILQNAGPIFRTNEMFINAIKQYLCVALSKNGVSSVPEVFELSLSIFLTLLSNFKTHLKMQIEVFFKEIFLYILETSTS
SFDHKWMVIQTLTRICADAQSVVDIYVNYDCDLNAANIFERLVNDLSKIAQGRGSQELGMSNVQELSLRKKGLECLVSILKCMVEWSKDQ
YVNPNSQTTLGQEKPSEQEMSEIKHPETINRYGSLNSLESTSSSGIGSYSTQMSGTDNPEQFEVLKQQKEIIEQGIDLFNKKPKRGIQYL
QEQGMLGTTPEDIAQFLHQEERLDSTQVGEFLGDNDKFNKEVMYAYVDQHDFSGKDFVSALRMFLEGFRLPGEAQKIDRLMEKFAARYLE
CNQGQTLFASADTAYVLAYSIIMLTTDLHSPQVKNKMTKEQYIKMNRGINDSKDLPEEYLSAIYNEIAGKKISMKETKELTIPTKSSKQN
VASEKQRRLLYNLEMEQMAKTAKALMEAVSHVQAPFTSATHLEHVRPMFKEDLSLCKNLSVLYLYDNCISQITNLNYATNLTHLYLQNNC
ISCIENLRSLKKLEKLYLGGNYIAVIEGLEGLGELRELHVENQRLPLGEKLLFDPRTLHSLAKSLCILNISNNNIDDITDLELLENLNQL


* Fusion transcript sequences (only coding sequence (CDS) region).
>In-frame_ARFGEF1_ENST00000520381_chr8_68163534_-_PPP1R42_ENST00000522909_chr8_67926827_-_2013nt
ATGGTTATTCAGACACTGACGAGGATTTGTGCAGATGCTCAGAGTGTAGTGGATATTTATGTAAACTATGACTGTGACTTAAATGCAGCC
AATATATTTGAAAGACTAGTAAATGATCTATCAAAAATTGCTCAAGGAAGGGGCAGTCAAGAACTTGGTATGAGTAATGTTCAGGAATTG
AGCCTGAGGAAAAAAGGTTTAGAATGCTTAGTGTCGATTTTGAAGTGTATGGTTGAATGGAGTAAGGATCAGTATGTGAATCCCAACTCC
CAGACAACTCTTGGTCAGGAAAAACCCTCAGAGCAAGAGATGAGTGAAATCAAACACCCTGAGACAATAAACAGATACGGAAGTTTAAAT
TCCCTGGAGTCAACATCATCATCAGGAATAGGCAGCTACAGTACACAGATGTCTGGCACTGATAATCCAGAACAATTTGAGGTCCTAAAG
CAACAAAAAGAAATAATAGAACAAGGGATAGATTTATTTAATAAGAAACCAAAGAGAGGAATACAGTACCTCCAAGAACAAGGGATGCTT
GGCACCACACCTGAAGATATTGCCCAATTCTTACATCAAGAGGAAAGATTAGACTCTACTCAAGTGGGTGAGTTCCTGGGAGATAATGAT
AAATTTAACAAAGAAGTCATGTATGCATATGTGGACCAACATGACTTTTCAGGAAAAGACTTCGTTTCAGCCCTTCGTATGTTTCTAGAA
GGATTTCGTCTTCCAGGGGAAGCTCAGAAAATCGATCGATTAATGGAAAAATTTGCTGCAAGATACCTAGAATGCAACCAAGGACAAACT
CTCTTTGCTAGTGCGGATACAGCTTATGTTTTGGCTTATTCAATTATCATGTTGACCACAGACCTTCACAGTCCACAGGTGAAAAATAAA
ATGACAAAGGAACAATACATTAAGATGAATAGAGGTATCAATGACAGTAAAGACCTTCCTGAAGAGTATCTATCAGCCATCTATAATGAA
ATAGCTGGGAAAAAGATATCAATGAAAGAAACAAAAGAACTAACAATCCCTACAAAATCAAGTAAACAGAATGTAGCCAGTGAAAAACAA
AGAAGACTTCTGTATAACTTAGAAATGGAGCAGATGGCCAAGACAGCTAAAGCACTCATGGAGGCCGTGAGCCATGTTCAGGCACCCTTT
ACAAGTGCAACACATTTGGAGCATGTGAGGCCCATGTTTAAGGAAGACCTCTCTCTTTGCAAAAATCTTAGTGTTTTATATTTATATGAT
AATTGTATTAGTCAAATCACTAACCTGAATTATGCCACAAATCTGACCCACTTGTACCTACAAAACAATTGTATTTCATGTATAGAGAAC
CTCAGGTCATTAAAGAAACTGGAAAAACTGTATCTGGGAGGCAATTACATTGCTGTCATAGAAGGTTTAGAAGGATTAGGAGAACTAAGA
GAGCTTCATGTTGAGAATCAGAGGCTTCCCCTTGGGGAAAAGCTTCTGTTTGATCCAAGAACTCTTCATTCTCTGGCAAAATCCCTCTGT
ATATTGAATATCAGCAATAATAATATTGATGACATTACAGACTTAGAACTACTAGAGAATCTTAATCAGCTCATAGCCGTTGACAACCAA
CTTCTGCATGTGAAGGATTTGGAGTTTTTACTGAACAAGTTGATGAAGCTGTGGAAAATTGATCTAAATGGAAATCCTGTTTGTCTCAAA
CCAAAATACAGGGACAGACTGATATTGGTGTCCAAATCACTGGAATTTCTTGATGGAAAAGAAATTAAAAATATAGAAAGACAATTCCTA
ATGAATTGGAAAGCATCCAAAGATGCCAAGAAAATCAGCAAAAAAAGGAGCAGTAAAAATGAGGATGCAAGCAATTCACTCATAAGTAAC
TTCAAAACAATGCATCATATAGTTCCTGTTTATTACCCACAGGTGGGTAAGCCAAAATTAGCCTTTTTCTCTGAAATACAGAGATACCCT

>In-frame_ARFGEF1_ENST00000520381_chr8_68163534_-_PPP1R42_ENST00000324682_chr8_67926827_-_1770nt
ATGGTTATTCAGACACTGACGAGGATTTGTGCAGATGCTCAGAGTGTAGTGGATATTTATGTAAACTATGACTGTGACTTAAATGCAGCC
AATATATTTGAAAGACTAGTAAATGATCTATCAAAAATTGCTCAAGGAAGGGGCAGTCAAGAACTTGGTATGAGTAATGTTCAGGAATTG
AGCCTGAGGAAAAAAGGTTTAGAATGCTTAGTGTCGATTTTGAAGTGTATGGTTGAATGGAGTAAGGATCAGTATGTGAATCCCAACTCC
CAGACAACTCTTGGTCAGGAAAAACCCTCAGAGCAAGAGATGAGTGAAATCAAACACCCTGAGACAATAAACAGATACGGAAGTTTAAAT
TCCCTGGAGTCAACATCATCATCAGGAATAGGCAGCTACAGTACACAGATGTCTGGCACTGATAATCCAGAACAATTTGAGGTCCTAAAG
CAACAAAAAGAAATAATAGAACAAGGGATAGATTTATTTAATAAGAAACCAAAGAGAGGAATACAGTACCTCCAAGAACAAGGGATGCTT
GGCACCACACCTGAAGATATTGCCCAATTCTTACATCAAGAGGAAAGATTAGACTCTACTCAAGTGGGTGAGTTCCTGGGAGATAATGAT
AAATTTAACAAAGAAGTCATGTATGCATATGTGGACCAACATGACTTTTCAGGAAAAGACTTCGTTTCAGCCCTTCGTATGTTTCTAGAA
GGATTTCGTCTTCCAGGGGAAGCTCAGAAAATCGATCGATTAATGGAAAAATTTGCTGCAAGATACCTAGAATGCAACCAAGGACAAACT
CTCTTTGCTAGTGCGGATACAGCTTATGTTTTGGCTTATTCAATTATCATGTTGACCACAGACCTTCACAGTCCACAGGTGAAAAATAAA
ATGACAAAGGAACAATACATTAAGATGAATAGAGGTATCAATGACAGTAAAGACCTTCCTGAAGAGTATCTATCAGCCATCTATAATGAA
ATAGCTGGGAAAAAGATATCAATGAAAGAAACAAAAGAACTAACAATCCCTACAAAATCAAGTAAACAGAATGTAGCCAGTGAAAAACAA
AGAAGACTTCTGTATAACTTAGAAATGGAGCAGATGGCCAAGACAGCTAAAGCACTCATGGAGGCCGTGAGCCATGTTCAGGCACCCTTT
ACAAGTGCAACACATTTGGAGCATGTGAGGCCCATGTTTAAGGAAGACCTCTCTCTTTGCAAAAATCTTAGTGTTTTATATTTATATGAT
AATTGTATTAGTCAAATCACTAACCTGAATTATGCCACAAATCTGACCCACTTGTACCTACAAAACAATTGTATTTCATGTATAGAGAAC
CTCAGGTCATTAAAGAAACTGGAAAAACTGTATCTGGGAGGCAATTACATTGCTGTCATAGAAGGTTTAGAAGGATTAGGAGAACTAAGA
GAGCTTCATGTTGAGAATCAGAGGCTTCCCCTTGGGGAAAAGCTTCTGTTTGATCCAAGAACTCTTCATTCTCTGGCAAAATCCCTCTGT
ATATTGAATATCAGCAATAATAATATTGATGACATTACAGACTTAGAACTACTAGAGAATCTTAATCAGCTCATAGCCGTTGACAACCAA
CTTCTGCATGTGAAGGATTTGGAGTTTTTACTGAACAAGTTGATGAAGCTGTGGAAAATTGATCTAAATGGAAATCCTGTTTGTCTCAAA

>In-frame_ARFGEF1_ENST00000262215_chr8_68163534_-_PPP1R42_ENST00000522909_chr8_67926827_-_3651nt
ATGTATGAGGGGAAGAAGACGAAGAACATGTTCCTGACCCGGGCTCTGGAGAAGATATTGGCCGACAAGGAAGTGAAGAAGGCGCATCAC
TCCCAGCTGCGCAAAGCTTGCGAGGTGGCGTTAGAGGAAATAAAAGCGGAAACTGAAAAACAGAGTCCTCCTCATGGAGAAGCAAAAGCT
GGATCAAGCACCCTTCCACCAGTGAAATCAAAGACAAATTTTATTGAAGCAGACAAGTACTTCTTGCCTTTTGAGTTGGCATGCCAGTCC
AAATGTCCTCGCATAGTTAGTACATCTCTAGATTGCTTACAGAAACTTATTGCTTATGGGCACTTGACTGGCAATGCTCCAGATAGTACA
ACACCAGGCAAAAAATTAATTGATAGAATTATTGAAACAATATGTGGCTGCTTTCAGGGCCCTCAGACAGATGAAGGAGTTCAGCTGCAG
ATAATAAAGGCTTTACTTACTGCAGTAACATCACAACACATAGAAATTCATGAAGGGACTGTACTGCAAGCTGTGAGAACATGTTACAAT
ATCTACTTAGCAAGCAAAAATCTCATCAATCAGACAACAGCCAAAGCTACTCTCACTCAGATGCTAAATGTTATCTTTGCACGCATGGAA
AACCAAGCATTACAGGAAGCAAAACAAATGGAAAAAGAAAGGCATCGGCAGCATCATCATCTGTTACAGTCTCCAGTAAGCCATCACGAG
CCTGAATCACCTCAACTTAGATATTTGCCACCTCAGACTGTTGATCATATATCCCAAGAACACGAAGGGGACCTTGACCTCCATACAAAT
GATGTAGATAAAAGTCTTCAGGATGACACAGAGCCTGAAAATGGATCTGATATTTCCAGTGCAGAAAATGAACAGACTGAAGCTGATCAG
GCAACTGCAGCTGAAACATTATCTAAAAATGAAGTGTTATATGACGGAGAAAACCATGATTGTGAGGAAAAGCCACAAGACATTGTACAG
AACATTGTAGAAGAAATGGTGAACATTGTTGTTGGAGATATGGGAGAAGGGACTACTATAAATGCAAGTGCAGATGGCAACATTGGAACT
ATAGAGGATGGTAGTGACAGTGAAAATATTCAAGCAAATGGAATTCCAGGAACACCAATTTCTGTTGCATATACACCATCCTTACCTGAT
GATAGATTGTCAGTCTCTTCCAATGATACTCAGGAATCTGGAAATTCTTCAGGACCTTCACCTGGTGCTAAGTTTTCCCACATTTTACAA
AAGGATGCCTTTCTAGTATTCAGGTCATTGTGTAAACTGTCAATGAAACCACTGTCAGATGGACCACCAGATCCAAAGTCTCATGAACTA
CGATCCAAGATTCTTTCATTGCAGTTACTTCTATCCATTCTGCAGAATGCAGGACCTATTTTCAGGACAAATGAGATGTTTATTAATGCT
ATTAAGCAGTATCTTTGTGTTGCACTCTCAAAAAATGGAGTCTCATCTGTTCCAGAGGTTTTTGAGCTTTCTCTTTCTATATTTCTTACT
TTGTTGTCAAATTTCAAGACACATCTGAAGATGCAAATTGAGGTGTTCTTTAAAGAAATTTTCTTATACATTTTGGAAACTTCTACCAGC
TCATTTGATCACAAATGGATGGTTATTCAGACACTGACGAGGATTTGTGCAGATGCTCAGAGTGTAGTGGATATTTATGTAAACTATGAC
TGTGACTTAAATGCAGCCAATATATTTGAAAGACTAGTAAATGATCTATCAAAAATTGCTCAAGGAAGGGGCAGTCAAGAACTTGGTATG
AGTAATGTTCAGGAATTGAGCCTGAGGAAAAAAGGTTTAGAATGCTTAGTGTCGATTTTGAAGTGTATGGTTGAATGGAGTAAGGATCAG
TATGTGAATCCCAACTCCCAGACAACTCTTGGTCAGGAAAAACCCTCAGAGCAAGAGATGAGTGAAATCAAACACCCTGAGACAATAAAC
AGATACGGAAGTTTAAATTCCCTGGAGTCAACATCATCATCAGGAATAGGCAGCTACAGTACACAGATGTCTGGCACTGATAATCCAGAA
CAATTTGAGGTCCTAAAGCAACAAAAAGAAATAATAGAACAAGGGATAGATTTATTTAATAAGAAACCAAAGAGAGGAATACAGTACCTC
CAAGAACAAGGGATGCTTGGCACCACACCTGAAGATATTGCCCAATTCTTACATCAAGAGGAAAGATTAGACTCTACTCAAGTGGGTGAG
TTCCTGGGAGATAATGATAAATTTAACAAAGAAGTCATGTATGCATATGTGGACCAACATGACTTTTCAGGAAAAGACTTCGTTTCAGCC
CTTCGTATGTTTCTAGAAGGATTTCGTCTTCCAGGGGAAGCTCAGAAAATCGATCGATTAATGGAAAAATTTGCTGCAAGATACCTAGAA
TGCAACCAAGGACAAACTCTCTTTGCTAGTGCGGATACAGCTTATGTTTTGGCTTATTCAATTATCATGTTGACCACAGACCTTCACAGT
CCACAGGTGAAAAATAAAATGACAAAGGAACAATACATTAAGATGAATAGAGGTATCAATGACAGTAAAGACCTTCCTGAAGAGTATCTA
TCAGCCATCTATAATGAAATAGCTGGGAAAAAGATATCAATGAAAGAAACAAAAGAACTAACAATCCCTACAAAATCAAGTAAACAGAAT
GTAGCCAGTGAAAAACAAAGAAGACTTCTGTATAACTTAGAAATGGAGCAGATGGCCAAGACAGCTAAAGCACTCATGGAGGCCGTGAGC
CATGTTCAGGCACCCTTTACAAGTGCAACACATTTGGAGCATGTGAGGCCCATGTTTAAGGAAGACCTCTCTCTTTGCAAAAATCTTAGT
GTTTTATATTTATATGATAATTGTATTAGTCAAATCACTAACCTGAATTATGCCACAAATCTGACCCACTTGTACCTACAAAACAATTGT
ATTTCATGTATAGAGAACCTCAGGTCATTAAAGAAACTGGAAAAACTGTATCTGGGAGGCAATTACATTGCTGTCATAGAAGGTTTAGAA
GGATTAGGAGAACTAAGAGAGCTTCATGTTGAGAATCAGAGGCTTCCCCTTGGGGAAAAGCTTCTGTTTGATCCAAGAACTCTTCATTCT
CTGGCAAAATCCCTCTGTATATTGAATATCAGCAATAATAATATTGATGACATTACAGACTTAGAACTACTAGAGAATCTTAATCAGCTC
ATAGCCGTTGACAACCAACTTCTGCATGTGAAGGATTTGGAGTTTTTACTGAACAAGTTGATGAAGCTGTGGAAAATTGATCTAAATGGA
AATCCTGTTTGTCTCAAACCAAAATACAGGGACAGACTGATATTGGTGTCCAAATCACTGGAATTTCTTGATGGAAAAGAAATTAAAAAT
ATAGAAAGACAATTCCTAATGAATTGGAAAGCATCCAAAGATGCCAAGAAAATCAGCAAAAAAAGGAGCAGTAAAAATGAGGATGCAAGC
AATTCACTCATAAGTAACTTCAAAACAATGCATCATATAGTTCCTGTTTATTACCCACAGGTGGGTAAGCCAAAATTAGCCTTTTTCTCT

>In-frame_ARFGEF1_ENST00000262215_chr8_68163534_-_PPP1R42_ENST00000324682_chr8_67926827_-_3408nt
ATGTATGAGGGGAAGAAGACGAAGAACATGTTCCTGACCCGGGCTCTGGAGAAGATATTGGCCGACAAGGAAGTGAAGAAGGCGCATCAC
TCCCAGCTGCGCAAAGCTTGCGAGGTGGCGTTAGAGGAAATAAAAGCGGAAACTGAAAAACAGAGTCCTCCTCATGGAGAAGCAAAAGCT
GGATCAAGCACCCTTCCACCAGTGAAATCAAAGACAAATTTTATTGAAGCAGACAAGTACTTCTTGCCTTTTGAGTTGGCATGCCAGTCC
AAATGTCCTCGCATAGTTAGTACATCTCTAGATTGCTTACAGAAACTTATTGCTTATGGGCACTTGACTGGCAATGCTCCAGATAGTACA
ACACCAGGCAAAAAATTAATTGATAGAATTATTGAAACAATATGTGGCTGCTTTCAGGGCCCTCAGACAGATGAAGGAGTTCAGCTGCAG
ATAATAAAGGCTTTACTTACTGCAGTAACATCACAACACATAGAAATTCATGAAGGGACTGTACTGCAAGCTGTGAGAACATGTTACAAT
ATCTACTTAGCAAGCAAAAATCTCATCAATCAGACAACAGCCAAAGCTACTCTCACTCAGATGCTAAATGTTATCTTTGCACGCATGGAA
AACCAAGCATTACAGGAAGCAAAACAAATGGAAAAAGAAAGGCATCGGCAGCATCATCATCTGTTACAGTCTCCAGTAAGCCATCACGAG
CCTGAATCACCTCAACTTAGATATTTGCCACCTCAGACTGTTGATCATATATCCCAAGAACACGAAGGGGACCTTGACCTCCATACAAAT
GATGTAGATAAAAGTCTTCAGGATGACACAGAGCCTGAAAATGGATCTGATATTTCCAGTGCAGAAAATGAACAGACTGAAGCTGATCAG
GCAACTGCAGCTGAAACATTATCTAAAAATGAAGTGTTATATGACGGAGAAAACCATGATTGTGAGGAAAAGCCACAAGACATTGTACAG
AACATTGTAGAAGAAATGGTGAACATTGTTGTTGGAGATATGGGAGAAGGGACTACTATAAATGCAAGTGCAGATGGCAACATTGGAACT
ATAGAGGATGGTAGTGACAGTGAAAATATTCAAGCAAATGGAATTCCAGGAACACCAATTTCTGTTGCATATACACCATCCTTACCTGAT
GATAGATTGTCAGTCTCTTCCAATGATACTCAGGAATCTGGAAATTCTTCAGGACCTTCACCTGGTGCTAAGTTTTCCCACATTTTACAA
AAGGATGCCTTTCTAGTATTCAGGTCATTGTGTAAACTGTCAATGAAACCACTGTCAGATGGACCACCAGATCCAAAGTCTCATGAACTA
CGATCCAAGATTCTTTCATTGCAGTTACTTCTATCCATTCTGCAGAATGCAGGACCTATTTTCAGGACAAATGAGATGTTTATTAATGCT
ATTAAGCAGTATCTTTGTGTTGCACTCTCAAAAAATGGAGTCTCATCTGTTCCAGAGGTTTTTGAGCTTTCTCTTTCTATATTTCTTACT
TTGTTGTCAAATTTCAAGACACATCTGAAGATGCAAATTGAGGTGTTCTTTAAAGAAATTTTCTTATACATTTTGGAAACTTCTACCAGC
TCATTTGATCACAAATGGATGGTTATTCAGACACTGACGAGGATTTGTGCAGATGCTCAGAGTGTAGTGGATATTTATGTAAACTATGAC
TGTGACTTAAATGCAGCCAATATATTTGAAAGACTAGTAAATGATCTATCAAAAATTGCTCAAGGAAGGGGCAGTCAAGAACTTGGTATG
AGTAATGTTCAGGAATTGAGCCTGAGGAAAAAAGGTTTAGAATGCTTAGTGTCGATTTTGAAGTGTATGGTTGAATGGAGTAAGGATCAG
TATGTGAATCCCAACTCCCAGACAACTCTTGGTCAGGAAAAACCCTCAGAGCAAGAGATGAGTGAAATCAAACACCCTGAGACAATAAAC
AGATACGGAAGTTTAAATTCCCTGGAGTCAACATCATCATCAGGAATAGGCAGCTACAGTACACAGATGTCTGGCACTGATAATCCAGAA
CAATTTGAGGTCCTAAAGCAACAAAAAGAAATAATAGAACAAGGGATAGATTTATTTAATAAGAAACCAAAGAGAGGAATACAGTACCTC
CAAGAACAAGGGATGCTTGGCACCACACCTGAAGATATTGCCCAATTCTTACATCAAGAGGAAAGATTAGACTCTACTCAAGTGGGTGAG
TTCCTGGGAGATAATGATAAATTTAACAAAGAAGTCATGTATGCATATGTGGACCAACATGACTTTTCAGGAAAAGACTTCGTTTCAGCC
CTTCGTATGTTTCTAGAAGGATTTCGTCTTCCAGGGGAAGCTCAGAAAATCGATCGATTAATGGAAAAATTTGCTGCAAGATACCTAGAA
TGCAACCAAGGACAAACTCTCTTTGCTAGTGCGGATACAGCTTATGTTTTGGCTTATTCAATTATCATGTTGACCACAGACCTTCACAGT
CCACAGGTGAAAAATAAAATGACAAAGGAACAATACATTAAGATGAATAGAGGTATCAATGACAGTAAAGACCTTCCTGAAGAGTATCTA
TCAGCCATCTATAATGAAATAGCTGGGAAAAAGATATCAATGAAAGAAACAAAAGAACTAACAATCCCTACAAAATCAAGTAAACAGAAT
GTAGCCAGTGAAAAACAAAGAAGACTTCTGTATAACTTAGAAATGGAGCAGATGGCCAAGACAGCTAAAGCACTCATGGAGGCCGTGAGC
CATGTTCAGGCACCCTTTACAAGTGCAACACATTTGGAGCATGTGAGGCCCATGTTTAAGGAAGACCTCTCTCTTTGCAAAAATCTTAGT
GTTTTATATTTATATGATAATTGTATTAGTCAAATCACTAACCTGAATTATGCCACAAATCTGACCCACTTGTACCTACAAAACAATTGT
ATTTCATGTATAGAGAACCTCAGGTCATTAAAGAAACTGGAAAAACTGTATCTGGGAGGCAATTACATTGCTGTCATAGAAGGTTTAGAA
GGATTAGGAGAACTAAGAGAGCTTCATGTTGAGAATCAGAGGCTTCCCCTTGGGGAAAAGCTTCTGTTTGATCCAAGAACTCTTCATTCT
CTGGCAAAATCCCTCTGTATATTGAATATCAGCAATAATAATATTGATGACATTACAGACTTAGAACTACTAGAGAATCTTAATCAGCTC
ATAGCCGTTGACAACCAACTTCTGCATGTGAAGGATTTGGAGTTTTTACTGAACAAGTTGATGAAGCTGTGGAAAATTGATCTAAATGGA


* Fusion transcript sequences (Full-length transcript).
>In-frame_ARFGEF1_ENST00000520381_chr8_68163534_-_PPP1R42_ENST00000522909_chr8_67926827_-_2248nt
AGGTGTTCTTTAAAGAAATTTTCTTATACATTTTGGAAACTTCTACCAGCTCATTTGATCACAAATGGATGGTTATTCAGACACTGACGA
GGATTTGTGCAGATGCTCAGAGTGTAGTGGATATTTATGTAAACTATGACTGTGACTTAAATGCAGCCAATATATTTGAAAGACTAGTAA
ATGATCTATCAAAAATTGCTCAAGGAAGGGGCAGTCAAGAACTTGGTATGAGTAATGTTCAGGAATTGAGCCTGAGGAAAAAAGGTTTAG
AATGCTTAGTGTCGATTTTGAAGTGTATGGTTGAATGGAGTAAGGATCAGTATGTGAATCCCAACTCCCAGACAACTCTTGGTCAGGAAA
AACCCTCAGAGCAAGAGATGAGTGAAATCAAACACCCTGAGACAATAAACAGATACGGAAGTTTAAATTCCCTGGAGTCAACATCATCAT
CAGGAATAGGCAGCTACAGTACACAGATGTCTGGCACTGATAATCCAGAACAATTTGAGGTCCTAAAGCAACAAAAAGAAATAATAGAAC
AAGGGATAGATTTATTTAATAAGAAACCAAAGAGAGGAATACAGTACCTCCAAGAACAAGGGATGCTTGGCACCACACCTGAAGATATTG
CCCAATTCTTACATCAAGAGGAAAGATTAGACTCTACTCAAGTGGGTGAGTTCCTGGGAGATAATGATAAATTTAACAAAGAAGTCATGT
ATGCATATGTGGACCAACATGACTTTTCAGGAAAAGACTTCGTTTCAGCCCTTCGTATGTTTCTAGAAGGATTTCGTCTTCCAGGGGAAG
CTCAGAAAATCGATCGATTAATGGAAAAATTTGCTGCAAGATACCTAGAATGCAACCAAGGACAAACTCTCTTTGCTAGTGCGGATACAG
CTTATGTTTTGGCTTATTCAATTATCATGTTGACCACAGACCTTCACAGTCCACAGGTGAAAAATAAAATGACAAAGGAACAATACATTA
AGATGAATAGAGGTATCAATGACAGTAAAGACCTTCCTGAAGAGTATCTATCAGCCATCTATAATGAAATAGCTGGGAAAAAGATATCAA
TGAAAGAAACAAAAGAACTAACAATCCCTACAAAATCAAGTAAACAGAATGTAGCCAGTGAAAAACAAAGAAGACTTCTGTATAACTTAG
AAATGGAGCAGATGGCCAAGACAGCTAAAGCACTCATGGAGGCCGTGAGCCATGTTCAGGCACCCTTTACAAGTGCAACACATTTGGAGC
ATGTGAGGCCCATGTTTAAGGAAGACCTCTCTCTTTGCAAAAATCTTAGTGTTTTATATTTATATGATAATTGTATTAGTCAAATCACTA
ACCTGAATTATGCCACAAATCTGACCCACTTGTACCTACAAAACAATTGTATTTCATGTATAGAGAACCTCAGGTCATTAAAGAAACTGG
AAAAACTGTATCTGGGAGGCAATTACATTGCTGTCATAGAAGGTTTAGAAGGATTAGGAGAACTAAGAGAGCTTCATGTTGAGAATCAGA
GGCTTCCCCTTGGGGAAAAGCTTCTGTTTGATCCAAGAACTCTTCATTCTCTGGCAAAATCCCTCTGTATATTGAATATCAGCAATAATA
ATATTGATGACATTACAGACTTAGAACTACTAGAGAATCTTAATCAGCTCATAGCCGTTGACAACCAACTTCTGCATGTGAAGGATTTGG
AGTTTTTACTGAACAAGTTGATGAAGCTGTGGAAAATTGATCTAAATGGAAATCCTGTTTGTCTCAAACCAAAATACAGGGACAGACTGA
TATTGGTGTCCAAATCACTGGAATTTCTTGATGGAAAAGAAATTAAAAATATAGAAAGACAATTCCTAATGAATTGGAAAGCATCCAAAG
ATGCCAAGAAAATCAGCAAAAAAAGGAGCAGTAAAAATGAGGATGCAAGCAATTCACTCATAAGTAACTTCAAAACAATGCATCATATAG
TTCCTGTTTATTACCCACAGGTGGGTAAGCCAAAATTAGCCTTTTTCTCTGAAATACAGAGATACCCTGTAAATGCAAATGCATCTCCAG
AAAGTTCCTGAGAAGATTACACTAAAATTATTTAAGAGATGGGGAATCTCTCTTTGAAGCAATCTGAAAGCTTGCTGACAAAAAATGATG

>In-frame_ARFGEF1_ENST00000520381_chr8_68163534_-_PPP1R42_ENST00000324682_chr8_67926827_-_2090nt
AGGTGTTCTTTAAAGAAATTTTCTTATACATTTTGGAAACTTCTACCAGCTCATTTGATCACAAATGGATGGTTATTCAGACACTGACGA
GGATTTGTGCAGATGCTCAGAGTGTAGTGGATATTTATGTAAACTATGACTGTGACTTAAATGCAGCCAATATATTTGAAAGACTAGTAA
ATGATCTATCAAAAATTGCTCAAGGAAGGGGCAGTCAAGAACTTGGTATGAGTAATGTTCAGGAATTGAGCCTGAGGAAAAAAGGTTTAG
AATGCTTAGTGTCGATTTTGAAGTGTATGGTTGAATGGAGTAAGGATCAGTATGTGAATCCCAACTCCCAGACAACTCTTGGTCAGGAAA
AACCCTCAGAGCAAGAGATGAGTGAAATCAAACACCCTGAGACAATAAACAGATACGGAAGTTTAAATTCCCTGGAGTCAACATCATCAT
CAGGAATAGGCAGCTACAGTACACAGATGTCTGGCACTGATAATCCAGAACAATTTGAGGTCCTAAAGCAACAAAAAGAAATAATAGAAC
AAGGGATAGATTTATTTAATAAGAAACCAAAGAGAGGAATACAGTACCTCCAAGAACAAGGGATGCTTGGCACCACACCTGAAGATATTG
CCCAATTCTTACATCAAGAGGAAAGATTAGACTCTACTCAAGTGGGTGAGTTCCTGGGAGATAATGATAAATTTAACAAAGAAGTCATGT
ATGCATATGTGGACCAACATGACTTTTCAGGAAAAGACTTCGTTTCAGCCCTTCGTATGTTTCTAGAAGGATTTCGTCTTCCAGGGGAAG
CTCAGAAAATCGATCGATTAATGGAAAAATTTGCTGCAAGATACCTAGAATGCAACCAAGGACAAACTCTCTTTGCTAGTGCGGATACAG
CTTATGTTTTGGCTTATTCAATTATCATGTTGACCACAGACCTTCACAGTCCACAGGTGAAAAATAAAATGACAAAGGAACAATACATTA
AGATGAATAGAGGTATCAATGACAGTAAAGACCTTCCTGAAGAGTATCTATCAGCCATCTATAATGAAATAGCTGGGAAAAAGATATCAA
TGAAAGAAACAAAAGAACTAACAATCCCTACAAAATCAAGTAAACAGAATGTAGCCAGTGAAAAACAAAGAAGACTTCTGTATAACTTAG
AAATGGAGCAGATGGCCAAGACAGCTAAAGCACTCATGGAGGCCGTGAGCCATGTTCAGGCACCCTTTACAAGTGCAACACATTTGGAGC
ATGTGAGGCCCATGTTTAAGGAAGACCTCTCTCTTTGCAAAAATCTTAGTGTTTTATATTTATATGATAATTGTATTAGTCAAATCACTA
ACCTGAATTATGCCACAAATCTGACCCACTTGTACCTACAAAACAATTGTATTTCATGTATAGAGAACCTCAGGTCATTAAAGAAACTGG
AAAAACTGTATCTGGGAGGCAATTACATTGCTGTCATAGAAGGTTTAGAAGGATTAGGAGAACTAAGAGAGCTTCATGTTGAGAATCAGA
GGCTTCCCCTTGGGGAAAAGCTTCTGTTTGATCCAAGAACTCTTCATTCTCTGGCAAAATCCCTCTGTATATTGAATATCAGCAATAATA
ATATTGATGACATTACAGACTTAGAACTACTAGAGAATCTTAATCAGCTCATAGCCGTTGACAACCAACTTCTGCATGTGAAGGATTTGG
AGTTTTTACTGAACAAGTTGATGAAGCTGTGGAAAATTGATCTAAATGGAAATCCTGTTTGTCTCAAACCAAAATACAGGGACAGACTGA
TATTGGTGTCCAAATCACTGGGTACATATTTATATTAATATAATTTTTAAGAGAATGACACCTAGTTAACTTTTTGGTTATTTTACCAGC
AAGCTTTCAGAAATATAAATCTGACATCTGGATCTGTGAAAATTGTCAACTTTAAATTCAATATTTTGAATAAGAGCAAAAGTTAAAATT
GACAAATAAAGCATGAAAAACATCTGCTGTTCAGAAGTAATTAAAGCACCTGATACTTATTCCTTAAGGAGGATATTTTGCTATTACCAA

>In-frame_ARFGEF1_ENST00000262215_chr8_68163534_-_PPP1R42_ENST00000522909_chr8_67926827_-_4208nt
GCGGTGCCTCTGAGAGCCGCCGCCACCTCGTCCCTCAGTTCCCGGCAGACAGCCGCCCGGGCCGGGCTCCCTCACCGCCACCAGGGCCGG
AGGGACGAGTGAGAGGGGCGGCCGGGACGCGACCCCCGGGCCGGGAGAAGCGGAGGCCCGACGGGCGCGGCCCTCGAGGTACGGCTTCTT
GGGGGCGGCGAGGACCTCGACGCCCTTCGCCGACACCGCGGCTGGTCCCGCTCGCCCGCCCCTTCCTGATCCTGCCGCTGCCCTCCACGC
CTCCAATCCCCCACCTCCACCCCCTCTCCTTTCTCTCTTCTCTTCCTTCCTCTCCTCCTCCTCCCCTCCAGCCGCTGGGAGCCGCGGGTC
GGACGAGCCGCCGCCTCCTTCTCTGCGTCCATGTATGAGGGGAAGAAGACGAAGAACATGTTCCTGACCCGGGCTCTGGAGAAGATATTG
GCCGACAAGGAAGTGAAGAAGGCGCATCACTCCCAGCTGCGCAAAGCTTGCGAGGTGGCGTTAGAGGAAATAAAAGCGGAAACTGAAAAA
CAGAGTCCTCCTCATGGAGAAGCAAAAGCTGGATCAAGCACCCTTCCACCAGTGAAATCAAAGACAAATTTTATTGAAGCAGACAAGTAC
TTCTTGCCTTTTGAGTTGGCATGCCAGTCCAAATGTCCTCGCATAGTTAGTACATCTCTAGATTGCTTACAGAAACTTATTGCTTATGGG
CACTTGACTGGCAATGCTCCAGATAGTACAACACCAGGCAAAAAATTAATTGATAGAATTATTGAAACAATATGTGGCTGCTTTCAGGGC
CCTCAGACAGATGAAGGAGTTCAGCTGCAGATAATAAAGGCTTTACTTACTGCAGTAACATCACAACACATAGAAATTCATGAAGGGACT
GTACTGCAAGCTGTGAGAACATGTTACAATATCTACTTAGCAAGCAAAAATCTCATCAATCAGACAACAGCCAAAGCTACTCTCACTCAG
ATGCTAAATGTTATCTTTGCACGCATGGAAAACCAAGCATTACAGGAAGCAAAACAAATGGAAAAAGAAAGGCATCGGCAGCATCATCAT
CTGTTACAGTCTCCAGTAAGCCATCACGAGCCTGAATCACCTCAACTTAGATATTTGCCACCTCAGACTGTTGATCATATATCCCAAGAA
CACGAAGGGGACCTTGACCTCCATACAAATGATGTAGATAAAAGTCTTCAGGATGACACAGAGCCTGAAAATGGATCTGATATTTCCAGT
GCAGAAAATGAACAGACTGAAGCTGATCAGGCAACTGCAGCTGAAACATTATCTAAAAATGAAGTGTTATATGACGGAGAAAACCATGAT
TGTGAGGAAAAGCCACAAGACATTGTACAGAACATTGTAGAAGAAATGGTGAACATTGTTGTTGGAGATATGGGAGAAGGGACTACTATA
AATGCAAGTGCAGATGGCAACATTGGAACTATAGAGGATGGTAGTGACAGTGAAAATATTCAAGCAAATGGAATTCCAGGAACACCAATT
TCTGTTGCATATACACCATCCTTACCTGATGATAGATTGTCAGTCTCTTCCAATGATACTCAGGAATCTGGAAATTCTTCAGGACCTTCA
CCTGGTGCTAAGTTTTCCCACATTTTACAAAAGGATGCCTTTCTAGTATTCAGGTCATTGTGTAAACTGTCAATGAAACCACTGTCAGAT
GGACCACCAGATCCAAAGTCTCATGAACTACGATCCAAGATTCTTTCATTGCAGTTACTTCTATCCATTCTGCAGAATGCAGGACCTATT
TTCAGGACAAATGAGATGTTTATTAATGCTATTAAGCAGTATCTTTGTGTTGCACTCTCAAAAAATGGAGTCTCATCTGTTCCAGAGGTT
TTTGAGCTTTCTCTTTCTATATTTCTTACTTTGTTGTCAAATTTCAAGACACATCTGAAGATGCAAATTGAGGTGTTCTTTAAAGAAATT
TTCTTATACATTTTGGAAACTTCTACCAGCTCATTTGATCACAAATGGATGGTTATTCAGACACTGACGAGGATTTGTGCAGATGCTCAG
AGTGTAGTGGATATTTATGTAAACTATGACTGTGACTTAAATGCAGCCAATATATTTGAAAGACTAGTAAATGATCTATCAAAAATTGCT
CAAGGAAGGGGCAGTCAAGAACTTGGTATGAGTAATGTTCAGGAATTGAGCCTGAGGAAAAAAGGTTTAGAATGCTTAGTGTCGATTTTG
AAGTGTATGGTTGAATGGAGTAAGGATCAGTATGTGAATCCCAACTCCCAGACAACTCTTGGTCAGGAAAAACCCTCAGAGCAAGAGATG
AGTGAAATCAAACACCCTGAGACAATAAACAGATACGGAAGTTTAAATTCCCTGGAGTCAACATCATCATCAGGAATAGGCAGCTACAGT
ACACAGATGTCTGGCACTGATAATCCAGAACAATTTGAGGTCCTAAAGCAACAAAAAGAAATAATAGAACAAGGGATAGATTTATTTAAT
AAGAAACCAAAGAGAGGAATACAGTACCTCCAAGAACAAGGGATGCTTGGCACCACACCTGAAGATATTGCCCAATTCTTACATCAAGAG
GAAAGATTAGACTCTACTCAAGTGGGTGAGTTCCTGGGAGATAATGATAAATTTAACAAAGAAGTCATGTATGCATATGTGGACCAACAT
GACTTTTCAGGAAAAGACTTCGTTTCAGCCCTTCGTATGTTTCTAGAAGGATTTCGTCTTCCAGGGGAAGCTCAGAAAATCGATCGATTA
ATGGAAAAATTTGCTGCAAGATACCTAGAATGCAACCAAGGACAAACTCTCTTTGCTAGTGCGGATACAGCTTATGTTTTGGCTTATTCA
ATTATCATGTTGACCACAGACCTTCACAGTCCACAGGTGAAAAATAAAATGACAAAGGAACAATACATTAAGATGAATAGAGGTATCAAT
GACAGTAAAGACCTTCCTGAAGAGTATCTATCAGCCATCTATAATGAAATAGCTGGGAAAAAGATATCAATGAAAGAAACAAAAGAACTA
ACAATCCCTACAAAATCAAGTAAACAGAATGTAGCCAGTGAAAAACAAAGAAGACTTCTGTATAACTTAGAAATGGAGCAGATGGCCAAG
ACAGCTAAAGCACTCATGGAGGCCGTGAGCCATGTTCAGGCACCCTTTACAAGTGCAACACATTTGGAGCATGTGAGGCCCATGTTTAAG
GAAGACCTCTCTCTTTGCAAAAATCTTAGTGTTTTATATTTATATGATAATTGTATTAGTCAAATCACTAACCTGAATTATGCCACAAAT
CTGACCCACTTGTACCTACAAAACAATTGTATTTCATGTATAGAGAACCTCAGGTCATTAAAGAAACTGGAAAAACTGTATCTGGGAGGC
AATTACATTGCTGTCATAGAAGGTTTAGAAGGATTAGGAGAACTAAGAGAGCTTCATGTTGAGAATCAGAGGCTTCCCCTTGGGGAAAAG
CTTCTGTTTGATCCAAGAACTCTTCATTCTCTGGCAAAATCCCTCTGTATATTGAATATCAGCAATAATAATATTGATGACATTACAGAC
TTAGAACTACTAGAGAATCTTAATCAGCTCATAGCCGTTGACAACCAACTTCTGCATGTGAAGGATTTGGAGTTTTTACTGAACAAGTTG
ATGAAGCTGTGGAAAATTGATCTAAATGGAAATCCTGTTTGTCTCAAACCAAAATACAGGGACAGACTGATATTGGTGTCCAAATCACTG
GAATTTCTTGATGGAAAAGAAATTAAAAATATAGAAAGACAATTCCTAATGAATTGGAAAGCATCCAAAGATGCCAAGAAAATCAGCAAA
AAAAGGAGCAGTAAAAATGAGGATGCAAGCAATTCACTCATAAGTAACTTCAAAACAATGCATCATATAGTTCCTGTTTATTACCCACAG
GTGGGTAAGCCAAAATTAGCCTTTTTCTCTGAAATACAGAGATACCCTGTAAATGCAAATGCATCTCCAGAAAGTTCCTGAGAAGATTAC
ACTAAAATTATTTAAGAGATGGGGAATCTCTCTTTGAAGCAATCTGAAAGCTTGCTGACAAAAAATGATGTGCATGAACCTCACCTCTTC

>In-frame_ARFGEF1_ENST00000262215_chr8_68163534_-_PPP1R42_ENST00000324682_chr8_67926827_-_4050nt
GCGGTGCCTCTGAGAGCCGCCGCCACCTCGTCCCTCAGTTCCCGGCAGACAGCCGCCCGGGCCGGGCTCCCTCACCGCCACCAGGGCCGG
AGGGACGAGTGAGAGGGGCGGCCGGGACGCGACCCCCGGGCCGGGAGAAGCGGAGGCCCGACGGGCGCGGCCCTCGAGGTACGGCTTCTT
GGGGGCGGCGAGGACCTCGACGCCCTTCGCCGACACCGCGGCTGGTCCCGCTCGCCCGCCCCTTCCTGATCCTGCCGCTGCCCTCCACGC
CTCCAATCCCCCACCTCCACCCCCTCTCCTTTCTCTCTTCTCTTCCTTCCTCTCCTCCTCCTCCCCTCCAGCCGCTGGGAGCCGCGGGTC
GGACGAGCCGCCGCCTCCTTCTCTGCGTCCATGTATGAGGGGAAGAAGACGAAGAACATGTTCCTGACCCGGGCTCTGGAGAAGATATTG
GCCGACAAGGAAGTGAAGAAGGCGCATCACTCCCAGCTGCGCAAAGCTTGCGAGGTGGCGTTAGAGGAAATAAAAGCGGAAACTGAAAAA
CAGAGTCCTCCTCATGGAGAAGCAAAAGCTGGATCAAGCACCCTTCCACCAGTGAAATCAAAGACAAATTTTATTGAAGCAGACAAGTAC
TTCTTGCCTTTTGAGTTGGCATGCCAGTCCAAATGTCCTCGCATAGTTAGTACATCTCTAGATTGCTTACAGAAACTTATTGCTTATGGG
CACTTGACTGGCAATGCTCCAGATAGTACAACACCAGGCAAAAAATTAATTGATAGAATTATTGAAACAATATGTGGCTGCTTTCAGGGC
CCTCAGACAGATGAAGGAGTTCAGCTGCAGATAATAAAGGCTTTACTTACTGCAGTAACATCACAACACATAGAAATTCATGAAGGGACT
GTACTGCAAGCTGTGAGAACATGTTACAATATCTACTTAGCAAGCAAAAATCTCATCAATCAGACAACAGCCAAAGCTACTCTCACTCAG
ATGCTAAATGTTATCTTTGCACGCATGGAAAACCAAGCATTACAGGAAGCAAAACAAATGGAAAAAGAAAGGCATCGGCAGCATCATCAT
CTGTTACAGTCTCCAGTAAGCCATCACGAGCCTGAATCACCTCAACTTAGATATTTGCCACCTCAGACTGTTGATCATATATCCCAAGAA
CACGAAGGGGACCTTGACCTCCATACAAATGATGTAGATAAAAGTCTTCAGGATGACACAGAGCCTGAAAATGGATCTGATATTTCCAGT
GCAGAAAATGAACAGACTGAAGCTGATCAGGCAACTGCAGCTGAAACATTATCTAAAAATGAAGTGTTATATGACGGAGAAAACCATGAT
TGTGAGGAAAAGCCACAAGACATTGTACAGAACATTGTAGAAGAAATGGTGAACATTGTTGTTGGAGATATGGGAGAAGGGACTACTATA
AATGCAAGTGCAGATGGCAACATTGGAACTATAGAGGATGGTAGTGACAGTGAAAATATTCAAGCAAATGGAATTCCAGGAACACCAATT
TCTGTTGCATATACACCATCCTTACCTGATGATAGATTGTCAGTCTCTTCCAATGATACTCAGGAATCTGGAAATTCTTCAGGACCTTCA
CCTGGTGCTAAGTTTTCCCACATTTTACAAAAGGATGCCTTTCTAGTATTCAGGTCATTGTGTAAACTGTCAATGAAACCACTGTCAGAT
GGACCACCAGATCCAAAGTCTCATGAACTACGATCCAAGATTCTTTCATTGCAGTTACTTCTATCCATTCTGCAGAATGCAGGACCTATT
TTCAGGACAAATGAGATGTTTATTAATGCTATTAAGCAGTATCTTTGTGTTGCACTCTCAAAAAATGGAGTCTCATCTGTTCCAGAGGTT
TTTGAGCTTTCTCTTTCTATATTTCTTACTTTGTTGTCAAATTTCAAGACACATCTGAAGATGCAAATTGAGGTGTTCTTTAAAGAAATT
TTCTTATACATTTTGGAAACTTCTACCAGCTCATTTGATCACAAATGGATGGTTATTCAGACACTGACGAGGATTTGTGCAGATGCTCAG
AGTGTAGTGGATATTTATGTAAACTATGACTGTGACTTAAATGCAGCCAATATATTTGAAAGACTAGTAAATGATCTATCAAAAATTGCT
CAAGGAAGGGGCAGTCAAGAACTTGGTATGAGTAATGTTCAGGAATTGAGCCTGAGGAAAAAAGGTTTAGAATGCTTAGTGTCGATTTTG
AAGTGTATGGTTGAATGGAGTAAGGATCAGTATGTGAATCCCAACTCCCAGACAACTCTTGGTCAGGAAAAACCCTCAGAGCAAGAGATG
AGTGAAATCAAACACCCTGAGACAATAAACAGATACGGAAGTTTAAATTCCCTGGAGTCAACATCATCATCAGGAATAGGCAGCTACAGT
ACACAGATGTCTGGCACTGATAATCCAGAACAATTTGAGGTCCTAAAGCAACAAAAAGAAATAATAGAACAAGGGATAGATTTATTTAAT
AAGAAACCAAAGAGAGGAATACAGTACCTCCAAGAACAAGGGATGCTTGGCACCACACCTGAAGATATTGCCCAATTCTTACATCAAGAG
GAAAGATTAGACTCTACTCAAGTGGGTGAGTTCCTGGGAGATAATGATAAATTTAACAAAGAAGTCATGTATGCATATGTGGACCAACAT
GACTTTTCAGGAAAAGACTTCGTTTCAGCCCTTCGTATGTTTCTAGAAGGATTTCGTCTTCCAGGGGAAGCTCAGAAAATCGATCGATTA
ATGGAAAAATTTGCTGCAAGATACCTAGAATGCAACCAAGGACAAACTCTCTTTGCTAGTGCGGATACAGCTTATGTTTTGGCTTATTCA
ATTATCATGTTGACCACAGACCTTCACAGTCCACAGGTGAAAAATAAAATGACAAAGGAACAATACATTAAGATGAATAGAGGTATCAAT
GACAGTAAAGACCTTCCTGAAGAGTATCTATCAGCCATCTATAATGAAATAGCTGGGAAAAAGATATCAATGAAAGAAACAAAAGAACTA
ACAATCCCTACAAAATCAAGTAAACAGAATGTAGCCAGTGAAAAACAAAGAAGACTTCTGTATAACTTAGAAATGGAGCAGATGGCCAAG
ACAGCTAAAGCACTCATGGAGGCCGTGAGCCATGTTCAGGCACCCTTTACAAGTGCAACACATTTGGAGCATGTGAGGCCCATGTTTAAG
GAAGACCTCTCTCTTTGCAAAAATCTTAGTGTTTTATATTTATATGATAATTGTATTAGTCAAATCACTAACCTGAATTATGCCACAAAT
CTGACCCACTTGTACCTACAAAACAATTGTATTTCATGTATAGAGAACCTCAGGTCATTAAAGAAACTGGAAAAACTGTATCTGGGAGGC
AATTACATTGCTGTCATAGAAGGTTTAGAAGGATTAGGAGAACTAAGAGAGCTTCATGTTGAGAATCAGAGGCTTCCCCTTGGGGAAAAG
CTTCTGTTTGATCCAAGAACTCTTCATTCTCTGGCAAAATCCCTCTGTATATTGAATATCAGCAATAATAATATTGATGACATTACAGAC
TTAGAACTACTAGAGAATCTTAATCAGCTCATAGCCGTTGACAACCAACTTCTGCATGTGAAGGATTTGGAGTTTTTACTGAACAAGTTG
ATGAAGCTGTGGAAAATTGATCTAAATGGAAATCCTGTTTGTCTCAAACCAAAATACAGGGACAGACTGATATTGGTGTCCAAATCACTG
GGTACATATTTATATTAATATAATTTTTAAGAGAATGACACCTAGTTAACTTTTTGGTTATTTTACCAGCAAGCTTTCAGAAATATAAAT
CTGACATCTGGATCTGTGAAAATTGTCAACTTTAAATTCAATATTTTGAATAAGAGCAAAAGTTAAAATTGACAAATAAAGCATGAAAAA
CATCTGCTGTTCAGAAGTAATTAAAGCACCTGATACTTATTCCTTAAGGAGGATATTTTGCTATTACCAATAAAAATGGTTAGTCATAAA


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FusionGenePPI for ARFGEF1_PPP1R42


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ChiPPI page

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check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors
ARFGEF1FKBP2, PRKAR1A, ARFGEF2, DPY30, NCL, FBL, NUP62, SSB, EGFR, SPINT2, CSGALNACT1, PVRIG, HLA-B, CD244, SLAMF1, TBC1D22A, ALDH3A2, TCL1B, NTRK1, SIGLECL1, EDNRB, LAMP3, NPY2R, BRCA1PPP1R42


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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RelatedDrugs for ARFGEF1_PPP1R42


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.0 2018-04-02)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for ARFGEF1_PPP1R42


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource