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Fusion gene ID: 21943 |
FusionGeneSummary for MIEF2_RAI1 |
Fusion gene summary |
Fusion gene information | Fusion gene name: MIEF2_RAI1 | Fusion gene ID: 21943 | Hgene | Tgene | Gene symbol | MIEF2 | RAI1 | Gene ID | 125170 | 10743 |
Gene name | mitochondrial elongation factor 2 | retinoic acid induced 1 | |
Synonyms | MID49|SMCR7 | SMCR|SMS | |
Cytomap | 17p11.2 | 17p11.2 | |
Type of gene | protein-coding | protein-coding | |
Description | mitochondrial dynamics protein MID49Smith-Magenis syndrome chromosomal region candidate gene 7 proteinSmith-Magenis syndrome chromosome region, candidate 7mitochondrial dynamic protein MID49mitochondrial dynamic protein of 49 kDamitochondrial dynamic | retinoic acid-induced protein 1Smith-Magenis syndrome chromosome region | |
Modification date | 20180519 | 20180523 | |
UniProtAcc | Q96C03 | Q7Z5J4 | |
Ensembl transtripts involved in fusion gene | ENST00000323019, ENST00000578174, ENST00000395704, ENST00000395703, ENST00000577216, ENST00000578621, ENST00000395706, | ENST00000353383, ENST00000489697, ENST00000261641, | |
Fusion gene scores | * DoF score | 2 X 2 X 1=4 | 4 X 4 X 3=48 |
# samples | 1 | 4 | |
** MAII score | log2(1/4*10)=1.32192809488736 | log2(4/48*10)=-0.263034405833794 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: MIEF2 [Title/Abstract] AND RAI1 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | MIEF2 | GO:0007005 | mitochondrion organization | 21508961 |
Hgene | MIEF2 | GO:0032464 | positive regulation of protein homooligomerization | 23530241 |
Hgene | MIEF2 | GO:0090141 | positive regulation of mitochondrial fission | 23283981|23530241 |
Hgene | MIEF2 | GO:0090314 | positive regulation of protein targeting to membrane | 23283981 |
Hgene | MIEF2 | GO:0090314 | positive regulation of protein targeting to membrane | 23921378 |
Tgene | RAI1 | GO:0045893 | positive regulation of transcription, DNA-templated | 22578325 |
Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | LD | BRCA | TCGA-AR-A2LR-01A | MIEF2 | chr17 | 18168078 | + | RAI1 | chr17 | 17707070 | + |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000323019 | ENST00000353383 | MIEF2 | chr17 | 18168078 | + | RAI1 | chr17 | 17707070 | + |
5CDS-intron | ENST00000323019 | ENST00000489697 | MIEF2 | chr17 | 18168078 | + | RAI1 | chr17 | 17707070 | + |
5CDS-intron | ENST00000323019 | ENST00000261641 | MIEF2 | chr17 | 18168078 | + | RAI1 | chr17 | 17707070 | + |
intron-3CDS | ENST00000578174 | ENST00000353383 | MIEF2 | chr17 | 18168078 | + | RAI1 | chr17 | 17707070 | + |
intron-intron | ENST00000578174 | ENST00000489697 | MIEF2 | chr17 | 18168078 | + | RAI1 | chr17 | 17707070 | + |
intron-intron | ENST00000578174 | ENST00000261641 | MIEF2 | chr17 | 18168078 | + | RAI1 | chr17 | 17707070 | + |
3UTR-3CDS | ENST00000395704 | ENST00000353383 | MIEF2 | chr17 | 18168078 | + | RAI1 | chr17 | 17707070 | + |
3UTR-intron | ENST00000395704 | ENST00000489697 | MIEF2 | chr17 | 18168078 | + | RAI1 | chr17 | 17707070 | + |
3UTR-intron | ENST00000395704 | ENST00000261641 | MIEF2 | chr17 | 18168078 | + | RAI1 | chr17 | 17707070 | + |
intron-3CDS | ENST00000395703 | ENST00000353383 | MIEF2 | chr17 | 18168078 | + | RAI1 | chr17 | 17707070 | + |
intron-intron | ENST00000395703 | ENST00000489697 | MIEF2 | chr17 | 18168078 | + | RAI1 | chr17 | 17707070 | + |
intron-intron | ENST00000395703 | ENST00000261641 | MIEF2 | chr17 | 18168078 | + | RAI1 | chr17 | 17707070 | + |
intron-3CDS | ENST00000577216 | ENST00000353383 | MIEF2 | chr17 | 18168078 | + | RAI1 | chr17 | 17707070 | + |
intron-intron | ENST00000577216 | ENST00000489697 | MIEF2 | chr17 | 18168078 | + | RAI1 | chr17 | 17707070 | + |
intron-intron | ENST00000577216 | ENST00000261641 | MIEF2 | chr17 | 18168078 | + | RAI1 | chr17 | 17707070 | + |
intron-3CDS | ENST00000578621 | ENST00000353383 | MIEF2 | chr17 | 18168078 | + | RAI1 | chr17 | 17707070 | + |
intron-intron | ENST00000578621 | ENST00000489697 | MIEF2 | chr17 | 18168078 | + | RAI1 | chr17 | 17707070 | + |
intron-intron | ENST00000578621 | ENST00000261641 | MIEF2 | chr17 | 18168078 | + | RAI1 | chr17 | 17707070 | + |
In-frame | ENST00000395706 | ENST00000353383 | MIEF2 | chr17 | 18168078 | + | RAI1 | chr17 | 17707070 | + |
5CDS-intron | ENST00000395706 | ENST00000489697 | MIEF2 | chr17 | 18168078 | + | RAI1 | chr17 | 17707070 | + |
5CDS-intron | ENST00000395706 | ENST00000261641 | MIEF2 | chr17 | 18168078 | + | RAI1 | chr17 | 17707070 | + |
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FusionProtFeatures for MIEF2_RAI1 |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
MIEF2 | RAI1 |
Mitochondrial outer membrane protein which regulatesmitochondrial fission. Promotes the recruitment and association ofthe fission mediator dynamin-related protein 1 (DNM1L) to themitochondrial surface independently of the mitochondrial fissionFIS1 and MFF proteins. Regulates DNM1L GTPase activity.{ECO:0000269|PubMed:21508961, ECO:0000269|PubMed:23283981,ECO:0000269|PubMed:23530241, ECO:0000269|PubMed:23921378}. | Transcriptional regulator of the circadian clockcomponents: CLOCK, ARNTL/BMAL1, ARNTL2/BMAL2, PER1/3, CRY1/2,NR1D1/2 and RORA/C. Positively regulates the transcriptionalactivity of CLOCK a core component of the circadian clock.Regulates transcription through chromatin remodeling byinteracting with other proteins in chromatin as well as proteinsin the basic transcriptional machinery. May be important forembryonic and postnatal development. May be involved in neuronaldifferentiation. {ECO:0000269|PubMed:22578325}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | >RAI1 | chr17:18168078 | chr17:17707070 | ENST00000353383 | + | 2 | 6 | 1855_1903 | 1855 | 1907 | Zinc finger | PHD-type |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | >MIEF2 | chr17:18168078 | chr17:17707070 | ENST00000323019 | + | 1 | 4 | 1_22 | -71 | 455 | Topological domain | Mitochondrial intermembrane |
Hgene | >MIEF2 | chr17:18168078 | chr17:17707070 | ENST00000323019 | + | 1 | 4 | 44_454 | -71 | 455 | Topological domain | Cytoplasmic |
Hgene | >MIEF2 | chr17:18168078 | chr17:17707070 | ENST00000395704 | + | 1 | 4 | 1_22 | -50 | 206 | Topological domain | Mitochondrial intermembrane |
Hgene | >MIEF2 | chr17:18168078 | chr17:17707070 | ENST00000395704 | + | 1 | 4 | 44_454 | -50 | 206 | Topological domain | Cytoplasmic |
Hgene | >MIEF2 | chr17:18168078 | chr17:17707070 | ENST00000395706 | + | 1 | 4 | 1_22 | -9 | 466 | Topological domain | Mitochondrial intermembrane |
Hgene | >MIEF2 | chr17:18168078 | chr17:17707070 | ENST00000395706 | + | 1 | 4 | 44_454 | -9 | 466 | Topological domain | Cytoplasmic |
Hgene | >MIEF2 | chr17:18168078 | chr17:17707070 | ENST00000323019 | + | 1 | 4 | 23_43 | -71 | 455 | Transmembrane | Helical |
Hgene | >MIEF2 | chr17:18168078 | chr17:17707070 | ENST00000395704 | + | 1 | 4 | 23_43 | -50 | 206 | Transmembrane | Helical |
Hgene | >MIEF2 | chr17:18168078 | chr17:17707070 | ENST00000395706 | + | 1 | 4 | 23_43 | -9 | 466 | Transmembrane | Helical |
Tgene | RAI1 | chr17:18168078 | chr17:17707070 | ENST00000353383 | + | 2 | 6 | 1243_1249 | 1855 | 1907 | Compositional bias | Note=Poly-Ser |
Tgene | RAI1 | chr17:18168078 | chr17:17707070 | ENST00000353383 | + | 2 | 6 | 124_135 | 1855 | 1907 | Compositional bias | Note=Poly-Pro |
Tgene | RAI1 | chr17:18168078 | chr17:17707070 | ENST00000353383 | + | 2 | 6 | 1493_1496 | 1855 | 1907 | Compositional bias | Note=Poly-Gly |
Tgene | RAI1 | chr17:18168078 | chr17:17707070 | ENST00000353383 | + | 2 | 6 | 156_336 | 1855 | 1907 | Compositional bias | Note=Gln-rich |
Tgene | RAI1 | chr17:18168078 | chr17:17707070 | ENST00000353383 | + | 2 | 6 | 1628_1641 | 1855 | 1907 | Compositional bias | Note=Ser-rich |
Tgene | RAI1 | chr17:18168078 | chr17:17707070 | ENST00000353383 | + | 2 | 6 | 1746_1751 | 1855 | 1907 | Compositional bias | Note=Poly-Ala |
Tgene | RAI1 | chr17:18168078 | chr17:17707070 | ENST00000353383 | + | 2 | 6 | 278_291 | 1855 | 1907 | Compositional bias | Note=Poly-Gln |
Tgene | RAI1 | chr17:18168078 | chr17:17707070 | ENST00000353383 | + | 2 | 6 | 1160_1177 | 1855 | 1907 | Motif | Nuclear localization signal |
Tgene | RAI1 | chr17:18168078 | chr17:17707070 | ENST00000353383 | + | 2 | 6 | 1223_1240 | 1855 | 1907 | Motif | Nuclear localization signal |
Tgene | RAI1 | chr17:18168078 | chr17:17707070 | ENST00000353383 | + | 2 | 6 | 1780_1835 | 1855 | 1907 | Zinc finger | C2HC pre-PHD-type |
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FusionGeneSequence for MIEF2_RAI1 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_MIEF2_ENST00000323019_chr17_18168078_+_RAI1_ENST00000353383_chr17_17707070_+_1103aa MAEFSQKRGKRRSDEGLGSMVDFLLANARLVLGVGGAAVLGIATLAVKRFIDRATSPRDEDDTKADSWKELSLLKATPHLQPRPPPAALS QPVLPLAPSSSAPEGPAETDPEVTPQLSSPAPLCLTLQERLLAFERDRVTIPAAQVALAKQLAGDIALELQAYFRSKFPELPFGAFVPGG PLYDGLQAGAADHVRLLVPLVLEPGLWSLVPGVDTVARDPRCWAVRRTQLEFCPRGSSPWDRFLVGGYLSSRVLLELLRKALAASVNWPA IGSLLGCLIRPSMASEELLLEVQHERLELTVAVLVAVPGVDADDRLLLAWPLEGLAGNLWLQDLYPVEAARLRALDDHDAGTRRRLLLLL CAVCRGCSALGQLGRGHLTQVVLRLGEDNVDWTEEALGERFLQALELLIGSLEQASLPCHFNPSVNLFSSLREEEIDDIGYALYSGLQEP EGLLXVGGNGWLPCFLMLGSCTHLPSRDLNSGFSLAFCQNKGGYITXTQGIRMCLGYGGHKPXAQRAWVTVTXVQLGCLRQLGVPAIPAS TVSALGANPRTFGSVHHQQPIHQQNVVSAILGRSXRPASHFCXEKVTXRLFRPXLQAFXGVWCLMVGMVCLFCPPGAGVTWCPXRTDFWL LKDGIFLLSSVRLVFLLSGSSVXLATHLIPQGKALFPSSQVSVFFRQLRVLGELRLCAAPPAHSWGISLELFQAPLESRGPDPPLERSGV HSRPPSVPKXTALSXWLYSDFEACXEVARGLEEGDSTSPPKXPSSCLWYPSFXNEAQLRRCEQEXKEKILMYIXLRLDKGVLVLSYAAVE GFLXVLWLVLALWQECLRSIGGGRVYFKKXHLGRVWWLASVIPAHREAEAGGSRGQEIETILTNMMKPQLYXKDKNXLGVVARTYSPSYS GGRGRRIAXTREVEVAMSXNCTTALQTGDRARLCLKKINKXASWPRAVAHAYNPSTLGSRGRXITXGWEFKTRLTNVEKLHLWXKFKKIS WAWWHMPVIPATWEAEAGELLEPGRRRLWXAEIVPVHSSLGNKSETLSQNKIKXNNNSNNKMCSSCQEAGATIGCCHKGCLHTYHYPCAS >In-frame_MIEF2_ENST00000395706_chr17_18168078_+_RAI1_ENST00000353383_chr17_17707070_+_857aa MGLSPNLDRQTMAEFSQKRGKRRSDEGLGSMVDFLLANARLVLGVGGAAVLGIATLAVKRFIDRATSPRDEDDTKADSWKELSLLKATPH LQPRPPPAALSQPVLPLAPSSSAPEGPAETDPEVTPQLSSPAPLCLTLQERLLAFERDRVTIPAAQVALAKQLAGDIALELQAYFRSKFP ELPFGAFVPGGPLYDGLQAGAADHVRLLVPLVLEPGLWSLVPGVDTVARDPRCWAVRRTQLEFCPRGSSPWDRFLVGGYLSSRVLLELLR KALAASVNWPAIGSLLGCLIRPSMASEELLLEVQHERLELTVAVLVAVPGVDADDRLLLAWPLEGLAGNLWLQDLYPVEAARLRALDDHD AGTRRRLLLLLCAVCRGCSALGQLGRGHLTQVVLRLGEDNVDWTEEALGERFLQALELLIGSLEQASLPCHFNPSVNLFSSLREEEIDDI GYALYSGLQEPEGLLXVGGNGWLPCFLMLGSCTHLPSRDLNSGFSLAFCQNKGGYITXTQGIRMCLGYGGHKPXAQRAWVTVTXVQLGCL RQLGVPAIPASTVSALGANPRTFGSVHHQQPIHQQNVVSAILGRSXRPASHFCXEKVTXRLFRPXLQAFXGVWCLMVGMVCLFCPPGAGV TWCPXRTDFWLLKDGIFLLSSVRLVFLLSGSSVXLATHLIPQGKALFPSSQVSVFFRQLRVLGELRLCAAPPAHSWGISLELFQAPLESR GPDPPLERSGVHSRPPSVPKXTALSXWLYSDFEACXEVARGLEEGDSTSPPKXPSSCLWYPSFXNEAQLRRCEQEXKEKILMYIXMCSSC |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_MIEF2_ENST00000323019_chr17_18168078_+_RAI1_ENST00000353383_chr17_17707070_+_3309nt ATGGCAGAGTTCTCCCAGAAACGGGGGAAGCGGCGTAGCGACGAAGGGCTGGGCAGCATGGTGGACTTCCTCCTGGCCAATGCCCGCCTG GTGCTGGGCGTGGGCGGGGCTGCTGTGCTGGGCATTGCCACCCTGGCCGTGAAGCGGTTCATTGACAGGGCCACTAGCCCGCGGGATGAG GATGACACCAAGGCAGACAGCTGGAAGGAACTGAGCCTGCTCAAGGCCACACCACACCTGCAGCCCCGGCCTCCACCTGCTGCCCTTAGC CAGCCAGTGTTGCCCTTGGCCCCCTCGTCGTCTGCCCCAGAAGGGCCTGCAGAAACTGATCCTGAGGTGACACCACAGCTCAGCTCCCCA GCACCGCTGTGTCTGACACTGCAGGAGAGGCTGCTGGCCTTCGAGCGGGACCGTGTGACCATCCCAGCAGCCCAGGTGGCTTTGGCCAAA CAGCTGGCTGGCGACATCGCCCTGGAGCTGCAGGCCTACTTTCGGAGCAAGTTCCCGGAACTGCCCTTTGGGGCATTCGTGCCTGGGGGG CCGCTCTACGACGGGCTGCAGGCGGGGGCTGCGGACCATGTGCGTCTCCTGGTGCCACTGGTGCTGGAGCCGGGCCTGTGGAGCCTGGTG CCGGGCGTGGACACTGTGGCGAGGGACCCTCGCTGCTGGGCCGTGCGCAGGACGCAGCTTGAGTTCTGCCCCCGTGGGAGCAGCCCCTGG GACCGCTTCCTGGTCGGGGGCTACCTCTCCTCCCGCGTCCTGCTGGAGCTACTCCGCAAGGCGCTGGCTGCTTCTGTCAACTGGCCGGCC ATTGGCAGCCTTCTCGGGTGCCTGATCCGGCCCAGCATGGCCTCGGAGGAGCTGCTGCTCGAGGTGCAGCACGAACGCCTGGAGCTCACT GTGGCTGTGCTTGTGGCAGTCCCTGGGGTCGATGCTGACGACCGCCTCCTCTTGGCCTGGCCCCTGGAGGGGCTGGCGGGGAACCTCTGG CTGCAGGACCTGTATCCAGTGGAGGCTGCTAGGCTGCGAGCCCTGGACGACCATGACGCTGGGACTCGCCGGCGGCTGCTGCTGCTGCTG TGTGCTGTCTGCCGTGGTTGCTCGGCTCTGGGGCAGCTAGGCCGGGGTCACCTGACCCAGGTGGTCCTGCGTCTGGGGGAGGACAACGTG GATTGGACGGAGGAGGCCTTGGGTGAGCGCTTCCTGCAAGCCCTGGAGCTGCTCATCGGCAGCCTGGAGCAGGCCAGCCTGCCCTGCCAC TTCAACCCCAGCGTGAACCTCTTCAGCAGCTTGCGTGAGGAGGAGATTGACGACATTGGCTATGCGCTATACAGTGGCCTACAGGAGCCC GAGGGGCTGCTCTAGGTGGGTGGAAACGGGTGGTTGCCATGTTTTCTAATGCTGGGGAGCTGCACCCACCTCCCTTCCAGGGATTTGAAT AGTGGTTTTTCTCTAGCTTTTTGCCAGAACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTGGGCTATGGTGGCCAT AAACCCTGAGCCCAGAGAGCTTGGGTCACTGTCACCTGAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGCCATTCCTGCAAGC ACCGTTTCAGCTCTTGGGGCCAACCCCAGGACCTTTGGCTCTGTCCATCACCAGCAACCAATCCACCAACAGAATGTGGTTTCTGCCATC CTGGGCAGAAGCTGAAGGCCAGCTTCACATTTCTGCTGAGAGAAGGTGACTTAACGCCTTTTCCGGCCCTAGCTCCAGGCGTTTTGAGGC GTCTGGTGCCTGATGGTAGGTATGGTGTGTTTGTTCTGTCCCCCAGGGGCTGGAGTCACCTGGTGCCCCTGAAGGACAGATTTTTGGCTG TTAAAGGATGGCATTTTCCTGCTGTCTTCTGTGCGTTTAGTTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACCT CAGGGCAAGGCCCTTTTTCCCTCCAGCCAGGTGAGTGTTTTCTTCAGGCAGCTGAGGGTCCTGGGGGAGCTGAGGCTCTGTGCTGCACCC CCAGCCCACAGCTGGGGCATCTCACTGGAGCTGTTCCAGGCCCCACTGGAGAGCAGAGGACCTGATCCCCCACTAGAGAGGTCCGGTGTG CACAGCCGGCCTCCCAGTGTGCCAAAATGAACTGCTCTCAGCTGATGGCTGTATTCTGACTTTGAAGCCTGTTAAGAGGTAGCAAGGGGG CTAGAGGAGGGAGATTCCACCTCCCCTCCCAAGTGACCCTCCTCCTGCCTCTGGTATCCTTCCTTTTGAAACGAAGCTCAGCTTCGAAGA TGTGAACAAGAATAAAAGGAAAAAATTCTAATGTATATATAACTCAGGCTGGATAAGGGAGTCTTGGTGCTTTCATACGCAGCTGTTGAG GGTTTTCTGTAAGTCCTGTGGCTTGTCCTGGCACTTTGGCAAGAGTGCTTGAGGTCAATTGGAGGTGGTAGAGTTTACTTTAAAAAGTAG CATCTTGGCCGGGTGTGGTGGCTCGCATCTGTAATCCCAGCACATCGGGAGGCCGAGGCGGGCGGATCACGAGGTCAAGAGATCGAGACC ATCCTGACCAACATGATGAAACCCCAACTCTACTAAAAAGACAAAAATTAGCTGGGCGTGGTGGCACGCACCTATAGTCCCAGCTACTCG GGAGGCCGAGGCAGGAGAATTGCTTGAACCCGGGAGGTAGAGGTTGCAATGAGCTGAAATTGCACCACTGCACTCCAGACTGGCGACAGA GCAAGACTCTGTCTCAAAAAAATAAATAAATAAGCATCTTGGCCCCGCGCTGTGGCTCACGCCTATAATCCCAGCACTTTGGGAAGCCGA GGCCGGTAGATCACCTGAGGTTGGGAATTCAAGACCAGGCTGACCAACGTGGAGAAACTCCATCTCTGGTAAAAATTCAAAAAAATTAGC TGGGCATGGTGGCACATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCGGGAGGCGGAGGTTGTGGTGA GCTGAGATCGTGCCAGTGCACTCCAGCCTAGGCAACAAGAGTGAAACTCTGTCTCAAAATAAAATAAAATAAAATAATAATAGTAATAAT AAAATGTGTTCCAGCTGCCAAGAAGCCGGGGCCACCATTGGGTGCTGCCACAAAGGATGCCTCCACACCTACCACTACCCGTGTGCCAGC >In-frame_MIEF2_ENST00000395706_chr17_18168078_+_RAI1_ENST00000353383_chr17_17707070_+_2571nt ATGGGGCTGAGTCCCAATTTAGACAGGCAGACCATGGCAGAGTTCTCCCAGAAACGGGGGAAGCGGCGTAGCGACGAAGGGCTGGGCAGC ATGGTGGACTTCCTCCTGGCCAATGCCCGCCTGGTGCTGGGCGTGGGCGGGGCTGCTGTGCTGGGCATTGCCACCCTGGCCGTGAAGCGG TTCATTGACAGGGCCACTAGCCCGCGGGATGAGGATGACACCAAGGCAGACAGCTGGAAGGAACTGAGCCTGCTCAAGGCCACACCACAC CTGCAGCCCCGGCCTCCACCTGCTGCCCTTAGCCAGCCAGTGTTGCCCTTGGCCCCCTCGTCGTCTGCCCCAGAAGGGCCTGCAGAAACT GATCCTGAGGTGACACCACAGCTCAGCTCCCCAGCACCGCTGTGTCTGACACTGCAGGAGAGGCTGCTGGCCTTCGAGCGGGACCGTGTG ACCATCCCAGCAGCCCAGGTGGCTTTGGCCAAACAGCTGGCTGGCGACATCGCCCTGGAGCTGCAGGCCTACTTTCGGAGCAAGTTCCCG GAACTGCCCTTTGGGGCATTCGTGCCTGGGGGGCCGCTCTACGACGGGCTGCAGGCGGGGGCTGCGGACCATGTGCGTCTCCTGGTGCCA CTGGTGCTGGAGCCGGGCCTGTGGAGCCTGGTGCCGGGCGTGGACACTGTGGCGAGGGACCCTCGCTGCTGGGCCGTGCGCAGGACGCAG CTTGAGTTCTGCCCCCGTGGGAGCAGCCCCTGGGACCGCTTCCTGGTCGGGGGCTACCTCTCCTCCCGCGTCCTGCTGGAGCTACTCCGC AAGGCGCTGGCTGCTTCTGTCAACTGGCCGGCCATTGGCAGCCTTCTCGGGTGCCTGATCCGGCCCAGCATGGCCTCGGAGGAGCTGCTG CTCGAGGTGCAGCACGAACGCCTGGAGCTCACTGTGGCTGTGCTTGTGGCAGTCCCTGGGGTCGATGCTGACGACCGCCTCCTCTTGGCC TGGCCCCTGGAGGGGCTGGCGGGGAACCTCTGGCTGCAGGACCTGTATCCAGTGGAGGCTGCTAGGCTGCGAGCCCTGGACGACCATGAC GCTGGGACTCGCCGGCGGCTGCTGCTGCTGCTGTGTGCTGTCTGCCGTGGTTGCTCGGCTCTGGGGCAGCTAGGCCGGGGTCACCTGACC CAGGTGGTCCTGCGTCTGGGGGAGGACAACGTGGATTGGACGGAGGAGGCCTTGGGTGAGCGCTTCCTGCAAGCCCTGGAGCTGCTCATC GGCAGCCTGGAGCAGGCCAGCCTGCCCTGCCACTTCAACCCCAGCGTGAACCTCTTCAGCAGCTTGCGTGAGGAGGAGATTGACGACATT GGCTATGCGCTATACAGTGGCCTACAGGAGCCCGAGGGGCTGCTCTAGGTGGGTGGAAACGGGTGGTTGCCATGTTTTCTAATGCTGGGG AGCTGCACCCACCTCCCTTCCAGGGATTTGAATAGTGGTTTTTCTCTAGCTTTTTGCCAGAACAAAGGAGGGTACATTACTTAAACCCAG GGCATCAGGATGTGCTTGGGCTATGGTGGCCATAAACCCTGAGCCCAGAGAGCTTGGGTCACTGTCACCTGAGTGCAGCTGGGCTGCCTC AGGCAGCTTGGAGTGCCAGCCATTCCTGCAAGCACCGTTTCAGCTCTTGGGGCCAACCCCAGGACCTTTGGCTCTGTCCATCACCAGCAA CCAATCCACCAACAGAATGTGGTTTCTGCCATCCTGGGCAGAAGCTGAAGGCCAGCTTCACATTTCTGCTGAGAGAAGGTGACTTAACGC CTTTTCCGGCCCTAGCTCCAGGCGTTTTGAGGCGTCTGGTGCCTGATGGTAGGTATGGTGTGTTTGTTCTGTCCCCCAGGGGCTGGAGTC ACCTGGTGCCCCTGAAGGACAGATTTTTGGCTGTTAAAGGATGGCATTTTCCTGCTGTCTTCTGTGCGTTTAGTTTTCTTGCTGAGCGGG AGCTCAGTATGACTTGCCACCCACCTGATACCTCAGGGCAAGGCCCTTTTTCCCTCCAGCCAGGTGAGTGTTTTCTTCAGGCAGCTGAGG GTCCTGGGGGAGCTGAGGCTCTGTGCTGCACCCCCAGCCCACAGCTGGGGCATCTCACTGGAGCTGTTCCAGGCCCCACTGGAGAGCAGA GGACCTGATCCCCCACTAGAGAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAACTGCTCTCAGCTGATGGCTGTATTCT GACTTTGAAGCCTGTTAAGAGGTAGCAAGGGGGCTAGAGGAGGGAGATTCCACCTCCCCTCCCAAGTGACCCTCCTCCTGCCTCTGGTAT CCTTCCTTTTGAAACGAAGCTCAGCTTCGAAGATGTGAACAAGAATAAAAGGAAAAAATTCTAATGTATATATAAATGTGTTCCAGCTGC CAAGAAGCCGGGGCCACCATTGGGTGCTGCCACAAAGGATGCCTCCACACCTACCACTACCCGTGTGCCAGCGATGCAGGTTGCATATTC |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_MIEF2_ENST00000323019_chr17_18168078_+_RAI1_ENST00000353383_chr17_17707070_+_4840nt CTGAGGCCTGCGCGACCCCGCCAGAGATGGGGCTGAGTCCCAATTTAGACAGGCAGACCATGGCAGAGTTCTCCCAGAAACGGGGGAAGC GGCGTAGCGACGAAGGGCTGGGCAGCATGGTGGACTTCCTCCTGGCCAATGCCCGCCTGGTGCTGGGCGTGGGCGGGGCTGCTGTGCTGG GCATTGCCACCCTGGCCGTGAAGCGGTTCATTGACAGGGCCACTAGCCCGCGGGATGAGGATGACACCAAGGCAGACAGCTGGAAGGAAC TGAGCCTGCTCAAGGCCACACCACACCTGCAGCCCCGGCCTCCACCTGCTGCCCTTAGCCAGCCAGTGTTGCCCTTGGCCCCCTCGTCGT CTGCCCCAGAAGGGCCTGCAGAAACTGATCCTGAGGTGACACCACAGCTCAGCTCCCCAGCACCGCTGTGTCTGACACTGCAGGAGAGGC TGCTGGCCTTCGAGCGGGACCGTGTGACCATCCCAGCAGCCCAGGTGGCTTTGGCCAAACAGCTGGCTGGCGACATCGCCCTGGAGCTGC AGGCCTACTTTCGGAGCAAGTTCCCGGAACTGCCCTTTGGGGCATTCGTGCCTGGGGGGCCGCTCTACGACGGGCTGCAGGCGGGGGCTG CGGACCATGTGCGTCTCCTGGTGCCACTGGTGCTGGAGCCGGGCCTGTGGAGCCTGGTGCCGGGCGTGGACACTGTGGCGAGGGACCCTC GCTGCTGGGCCGTGCGCAGGACGCAGCTTGAGTTCTGCCCCCGTGGGAGCAGCCCCTGGGACCGCTTCCTGGTCGGGGGCTACCTCTCCT CCCGCGTCCTGCTGGAGCTACTCCGCAAGGCGCTGGCTGCTTCTGTCAACTGGCCGGCCATTGGCAGCCTTCTCGGGTGCCTGATCCGGC CCAGCATGGCCTCGGAGGAGCTGCTGCTCGAGGTGCAGCACGAACGCCTGGAGCTCACTGTGGCTGTGCTTGTGGCAGTCCCTGGGGTCG ATGCTGACGACCGCCTCCTCTTGGCCTGGCCCCTGGAGGGGCTGGCGGGGAACCTCTGGCTGCAGGACCTGTATCCAGTGGAGGCTGCTA GGCTGCGAGCCCTGGACGACCATGACGCTGGGACTCGCCGGCGGCTGCTGCTGCTGCTGTGTGCTGTCTGCCGTGGTTGCTCGGCTCTGG GGCAGCTAGGCCGGGGTCACCTGACCCAGGTGGTCCTGCGTCTGGGGGAGGACAACGTGGATTGGACGGAGGAGGCCTTGGGTGAGCGCT TCCTGCAAGCCCTGGAGCTGCTCATCGGCAGCCTGGAGCAGGCCAGCCTGCCCTGCCACTTCAACCCCAGCGTGAACCTCTTCAGCAGCT TGCGTGAGGAGGAGATTGACGACATTGGCTATGCGCTATACAGTGGCCTACAGGAGCCCGAGGGGCTGCTCTAGGTGGGTGGAAACGGGT GGTTGCCATGTTTTCTAATGCTGGGGAGCTGCACCCACCTCCCTTCCAGGGATTTGAATAGTGGTTTTTCTCTAGCTTTTTGCCAGAACA AAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTGGGCTATGGTGGCCATAAACCCTGAGCCCAGAGAGCTTGGGTCACTG TCACCTGAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGCCATTCCTGCAAGCACCGTTTCAGCTCTTGGGGCCAACCCCAGGA CCTTTGGCTCTGTCCATCACCAGCAACCAATCCACCAACAGAATGTGGTTTCTGCCATCCTGGGCAGAAGCTGAAGGCCAGCTTCACATT TCTGCTGAGAGAAGGTGACTTAACGCCTTTTCCGGCCCTAGCTCCAGGCGTTTTGAGGCGTCTGGTGCCTGATGGTAGGTATGGTGTGTT TGTTCTGTCCCCCAGGGGCTGGAGTCACCTGGTGCCCCTGAAGGACAGATTTTTGGCTGTTAAAGGATGGCATTTTCCTGCTGTCTTCTG TGCGTTTAGTTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACCTCAGGGCAAGGCCCTTTTTCCCTCCAGCCAGG TGAGTGTTTTCTTCAGGCAGCTGAGGGTCCTGGGGGAGCTGAGGCTCTGTGCTGCACCCCCAGCCCACAGCTGGGGCATCTCACTGGAGC TGTTCCAGGCCCCACTGGAGAGCAGAGGACCTGATCCCCCACTAGAGAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAA CTGCTCTCAGCTGATGGCTGTATTCTGACTTTGAAGCCTGTTAAGAGGTAGCAAGGGGGCTAGAGGAGGGAGATTCCACCTCCCCTCCCA AGTGACCCTCCTCCTGCCTCTGGTATCCTTCCTTTTGAAACGAAGCTCAGCTTCGAAGATGTGAACAAGAATAAAAGGAAAAAATTCTAA TGTATATATAACTCAGGCTGGATAAGGGAGTCTTGGTGCTTTCATACGCAGCTGTTGAGGGTTTTCTGTAAGTCCTGTGGCTTGTCCTGG CACTTTGGCAAGAGTGCTTGAGGTCAATTGGAGGTGGTAGAGTTTACTTTAAAAAGTAGCATCTTGGCCGGGTGTGGTGGCTCGCATCTG TAATCCCAGCACATCGGGAGGCCGAGGCGGGCGGATCACGAGGTCAAGAGATCGAGACCATCCTGACCAACATGATGAAACCCCAACTCT ACTAAAAAGACAAAAATTAGCTGGGCGTGGTGGCACGCACCTATAGTCCCAGCTACTCGGGAGGCCGAGGCAGGAGAATTGCTTGAACCC GGGAGGTAGAGGTTGCAATGAGCTGAAATTGCACCACTGCACTCCAGACTGGCGACAGAGCAAGACTCTGTCTCAAAAAAATAAATAAAT AAGCATCTTGGCCCCGCGCTGTGGCTCACGCCTATAATCCCAGCACTTTGGGAAGCCGAGGCCGGTAGATCACCTGAGGTTGGGAATTCA AGACCAGGCTGACCAACGTGGAGAAACTCCATCTCTGGTAAAAATTCAAAAAAATTAGCTGGGCATGGTGGCACATGCCTGTAATCCCAG CTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCGGGAGGCGGAGGTTGTGGTGAGCTGAGATCGTGCCAGTGCACTCCAGCCTAG GCAACAAGAGTGAAACTCTGTCTCAAAATAAAATAAAATAAAATAATAATAGTAATAATAAAATGTGTTCCAGCTGCCAAGAAGCCGGGG CCACCATTGGGTGCTGCCACAAAGGATGCCTCCACACCTACCACTACCCGTGTGCCAGCGATGCAGGTTGCATATTCATCGAAGAGAACT TTTCTTTGAAATGTCCCAAACATAAGAGGCTGCCGTAGTAATCCACCCCAACGGCCGGAGGAGCCGCCGGAGCCCGCCTGCCCGCCCGCC GCCGAAGGAGAGGAGCCGCCTGCGCAGCCCCCGGGCCTTTGAGCTGCTCCCAGCGCTGGTCCAGAGCCGATCCTTGATCCGGGTCCCGGA TCGTGGATCCGGCCGCCTAGGGCTCAGACTTGCGGCCCCGGGTTGGGAGGAAAACCCGTTCCGGAGCCGCCTGCTCCCGGAACCGGACGG CACAGGGCGTTCTTGCCCACCCCAGGGGCCAGGCTTGCGGAGGGGGAGCCCGCGGAGCGGCCAGACTCCCCGGGGCGCTCAGCCTCCGGC GAGGGTGGGAGACGGCTTTGTCCTGGGGACACTTTCCCTCTGGAATCTCAAGACGACGTGGCACACATTCCACGTGGGTGCTGCCGCCAC CCCAGTCGGTCGTGGCGTGCAGCTGGGAGCCCTGGGCTTGGGGGTGGGGGTCGAAACAGTACTGGAAGAGGCGGAGGGCGGCTCCTAGCT CCGTGGACTAGGCGGGGGAGAAAGGAAGCCTTTCTGAGAGCGGGCTAGGCCGGCACTGGAGAGGCCGGAGCCTTTGGAACAAACCGTGCG GAACGCGTCCAGGGGCCTTCCCGCCCAGCCTTTGCCAGATCTCTCGTGCGGTTCGGGCAAAGCCGGGGTAGACCTGGGCTATGCTCAGTT AGGGGTTGCGGGATCCCCGAGTGTGGGCGGGACTGGGACACCCTTTGGCCTCTGTTTGTCCCCTTTCCAGTCCTCCACCCCACCCCTGGA GCCCAGCCTGGGAGCGCAAAACCCAAGAAGCGGCCAGAACGCACCTCCGGCTCCGGCGGACGCGCGACCGTTGTGCACCACCAGGGACCG CCGCGCCTACTCTGCACGGGAGCAGGGACAGCGCTAGATTTCGTGTACAAAACCTGTGTACCCCTCTATATATATGTTACATAGAATGTA TATATGTTGGGAACATGCTCGCTTCTCCCGTGTGTCGCCGCCGTGCGTCGTGCGCCCGCAACAGAGCCCCAACCGGGCCTTTGCCGGGTA AGGGGCTACCGCGACGCCACTTGTCCACGCAGCCACCACCGGCCCGGGCCAGTCCCTGCCAGTCCGTCCGCCTGTCCGTCCGTGTCCTCA GCTCTGTCCACGCTTCGATAGGCCTGACGCAGCCCCCAGCCCAGGGCCGCCCTAGCAACTTCCTGTACATATGACTGTAAAATGGTAAAC GTGTGTATTATATCTGGCCTCGTTATATAGTGTATATATATGTATACATATACATATATATAATATATATGAAGACTGTAAATGTTAAGA CGACTAGTGTTCTTATTAGTATATTGCTTCACACTGAAGATTGTGTGTATCGAGCTGTTTCTAAAAGATGTTTATTTTCCTTAAGAGTAA >In-frame_MIEF2_ENST00000395706_chr17_18168078_+_RAI1_ENST00000353383_chr17_17707070_+_4069nt CTGAGGCCTGCGCGACCCCGCCAGAGATGGGGCTGAGTCCCAATTTAGACAGGCAGACCATGGCAGAGTTCTCCCAGAAACGGGGGAAGC GGCGTAGCGACGAAGGGCTGGGCAGCATGGTGGACTTCCTCCTGGCCAATGCCCGCCTGGTGCTGGGCGTGGGCGGGGCTGCTGTGCTGG GCATTGCCACCCTGGCCGTGAAGCGGTTCATTGACAGGGCCACTAGCCCGCGGGATGAGGATGACACCAAGGCAGACAGCTGGAAGGAAC TGAGCCTGCTCAAGGCCACACCACACCTGCAGCCCCGGCCTCCACCTGCTGCCCTTAGCCAGCCAGTGTTGCCCTTGGCCCCCTCGTCGT CTGCCCCAGAAGGGCCTGCAGAAACTGATCCTGAGGTGACACCACAGCTCAGCTCCCCAGCACCGCTGTGTCTGACACTGCAGGAGAGGC TGCTGGCCTTCGAGCGGGACCGTGTGACCATCCCAGCAGCCCAGGTGGCTTTGGCCAAACAGCTGGCTGGCGACATCGCCCTGGAGCTGC AGGCCTACTTTCGGAGCAAGTTCCCGGAACTGCCCTTTGGGGCATTCGTGCCTGGGGGGCCGCTCTACGACGGGCTGCAGGCGGGGGCTG CGGACCATGTGCGTCTCCTGGTGCCACTGGTGCTGGAGCCGGGCCTGTGGAGCCTGGTGCCGGGCGTGGACACTGTGGCGAGGGACCCTC GCTGCTGGGCCGTGCGCAGGACGCAGCTTGAGTTCTGCCCCCGTGGGAGCAGCCCCTGGGACCGCTTCCTGGTCGGGGGCTACCTCTCCT CCCGCGTCCTGCTGGAGCTACTCCGCAAGGCGCTGGCTGCTTCTGTCAACTGGCCGGCCATTGGCAGCCTTCTCGGGTGCCTGATCCGGC CCAGCATGGCCTCGGAGGAGCTGCTGCTCGAGGTGCAGCACGAACGCCTGGAGCTCACTGTGGCTGTGCTTGTGGCAGTCCCTGGGGTCG ATGCTGACGACCGCCTCCTCTTGGCCTGGCCCCTGGAGGGGCTGGCGGGGAACCTCTGGCTGCAGGACCTGTATCCAGTGGAGGCTGCTA GGCTGCGAGCCCTGGACGACCATGACGCTGGGACTCGCCGGCGGCTGCTGCTGCTGCTGTGTGCTGTCTGCCGTGGTTGCTCGGCTCTGG GGCAGCTAGGCCGGGGTCACCTGACCCAGGTGGTCCTGCGTCTGGGGGAGGACAACGTGGATTGGACGGAGGAGGCCTTGGGTGAGCGCT TCCTGCAAGCCCTGGAGCTGCTCATCGGCAGCCTGGAGCAGGCCAGCCTGCCCTGCCACTTCAACCCCAGCGTGAACCTCTTCAGCAGCT TGCGTGAGGAGGAGATTGACGACATTGGCTATGCGCTATACAGTGGCCTACAGGAGCCCGAGGGGCTGCTCTAGGTGGGTGGAAACGGGT GGTTGCCATGTTTTCTAATGCTGGGGAGCTGCACCCACCTCCCTTCCAGGGATTTGAATAGTGGTTTTTCTCTAGCTTTTTGCCAGAACA AAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTGGGCTATGGTGGCCATAAACCCTGAGCCCAGAGAGCTTGGGTCACTG TCACCTGAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGCCATTCCTGCAAGCACCGTTTCAGCTCTTGGGGCCAACCCCAGGA CCTTTGGCTCTGTCCATCACCAGCAACCAATCCACCAACAGAATGTGGTTTCTGCCATCCTGGGCAGAAGCTGAAGGCCAGCTTCACATT TCTGCTGAGAGAAGGTGACTTAACGCCTTTTCCGGCCCTAGCTCCAGGCGTTTTGAGGCGTCTGGTGCCTGATGGTAGGTATGGTGTGTT TGTTCTGTCCCCCAGGGGCTGGAGTCACCTGGTGCCCCTGAAGGACAGATTTTTGGCTGTTAAAGGATGGCATTTTCCTGCTGTCTTCTG TGCGTTTAGTTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACCTCAGGGCAAGGCCCTTTTTCCCTCCAGCCAGG TGAGTGTTTTCTTCAGGCAGCTGAGGGTCCTGGGGGAGCTGAGGCTCTGTGCTGCACCCCCAGCCCACAGCTGGGGCATCTCACTGGAGC TGTTCCAGGCCCCACTGGAGAGCAGAGGACCTGATCCCCCACTAGAGAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAA CTGCTCTCAGCTGATGGCTGTATTCTGACTTTGAAGCCTGTTAAGAGGTAGCAAGGGGGCTAGAGGAGGGAGATTCCACCTCCCCTCCCA AGTGACCCTCCTCCTGCCTCTGGTATCCTTCCTTTTGAAACGAAGCTCAGCTTCGAAGATGTGAACAAGAATAAAAGGAAAAAATTCTAA TGTATATATAAATGTGTTCCAGCTGCCAAGAAGCCGGGGCCACCATTGGGTGCTGCCACAAAGGATGCCTCCACACCTACCACTACCCGT GTGCCAGCGATGCAGGTTGCATATTCATCGAAGAGAACTTTTCTTTGAAATGTCCCAAACATAAGAGGCTGCCGTAGTAATCCACCCCAA CGGCCGGAGGAGCCGCCGGAGCCCGCCTGCCCGCCCGCCGCCGAAGGAGAGGAGCCGCCTGCGCAGCCCCCGGGCCTTTGAGCTGCTCCC AGCGCTGGTCCAGAGCCGATCCTTGATCCGGGTCCCGGATCGTGGATCCGGCCGCCTAGGGCTCAGACTTGCGGCCCCGGGTTGGGAGGA AAACCCGTTCCGGAGCCGCCTGCTCCCGGAACCGGACGGCACAGGGCGTTCTTGCCCACCCCAGGGGCCAGGCTTGCGGAGGGGGAGCCC GCGGAGCGGCCAGACTCCCCGGGGCGCTCAGCCTCCGGCGAGGGTGGGAGACGGCTTTGTCCTGGGGACACTTTCCCTCTGGAATCTCAA GACGACGTGGCACACATTCCACGTGGGTGCTGCCGCCACCCCAGTCGGTCGTGGCGTGCAGCTGGGAGCCCTGGGCTTGGGGGTGGGGGT CGAAACAGTACTGGAAGAGGCGGAGGGCGGCTCCTAGCTCCGTGGACTAGGCGGGGGAGAAAGGAAGCCTTTCTGAGAGCGGGCTAGGCC GGCACTGGAGAGGCCGGAGCCTTTGGAACAAACCGTGCGGAACGCGTCCAGGGGCCTTCCCGCCCAGCCTTTGCCAGATCTCTCGTGCGG TTCGGGCAAAGCCGGGGTAGACCTGGGCTATGCTCAGTTAGGGGTTGCGGGATCCCCGAGTGTGGGCGGGACTGGGACACCCTTTGGCCT CTGTTTGTCCCCTTTCCAGTCCTCCACCCCACCCCTGGAGCCCAGCCTGGGAGCGCAAAACCCAAGAAGCGGCCAGAACGCACCTCCGGC TCCGGCGGACGCGCGACCGTTGTGCACCACCAGGGACCGCCGCGCCTACTCTGCACGGGAGCAGGGACAGCGCTAGATTTCGTGTACAAA ACCTGTGTACCCCTCTATATATATGTTACATAGAATGTATATATGTTGGGAACATGCTCGCTTCTCCCGTGTGTCGCCGCCGTGCGTCGT GCGCCCGCAACAGAGCCCCAACCGGGCCTTTGCCGGGTAAGGGGCTACCGCGACGCCACTTGTCCACGCAGCCACCACCGGCCCGGGCCA GTCCCTGCCAGTCCGTCCGCCTGTCCGTCCGTGTCCTCAGCTCTGTCCACGCTTCGATAGGCCTGACGCAGCCCCCAGCCCAGGGCCGCC CTAGCAACTTCCTGTACATATGACTGTAAAATGGTAAACGTGTGTATTATATCTGGCCTCGTTATATAGTGTATATATATGTATACATAT ACATATATATAATATATATGAAGACTGTAAATGTTAAGACGACTAGTGTTCTTATTAGTATATTGCTTCACACTGAAGATTGTGTGTATC GAGCTGTTTCTAAAAGATGTTTATTTTCCTTAAGAGTAAAAAACAGTCATTGCATTCAGAAAAAAAAAAAAAAAAAAGTCAATAAAGATA |
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FusionGenePPI for MIEF2_RAI1 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
MIEF2 | PSMF1, RABAC1, UBQLN1, UBQLN4, DNM1L, AGTRAP | RAI1 | PIN1, TESC, DDIT3, GATA1, GLI1, LZTR1, MAML3, ZNF496, MAPK8IP2, GSK3B, CASP2, RPS6KA5, CDKN1A, TTR, GADD45A, SIRT7, HECW2, HIST1H2BG, DAXX, TCF20, CDK2AP1, HMG20A, NAGK, NR3C1, AR |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for MIEF2_RAI1 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for MIEF2_RAI1 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Tgene | RAI1 | C0795864 | Smith-Magenis syndrome | 12 | CTD_human;ORPHANET |
Tgene | RAI1 | C0028754 | Obesity | 2 | CTD_human;HPO |
Tgene | RAI1 | C0003469 | Anxiety Disorders | 1 | CTD_human |
Tgene | RAI1 | C0018273 | Growth Disorders | 1 | CTD_human |
Tgene | RAI1 | C0025202 | melanoma | 1 | CTD_human |
Tgene | RAI1 | C0036341 | Schizophrenia | 1 | PSYGENET |
Tgene | RAI1 | C0376634 | Craniofacial Abnormalities | 1 | CTD_human |
Tgene | RAI1 | C0525041 | Neurobehavioral Manifestations | 1 | CTD_human |
Tgene | RAI1 | C0700201 | Dyssomnias | 1 | CTD_human |
Tgene | RAI1 | C1510586 | Autism Spectrum Disorders | 1 | CTD_human |
Tgene | RAI1 | C1970482 | Potocki-Lupski syndrome | 1 | CTD_human |
Tgene | RAI1 | C3714756 | Intellectual Disability | 1 | CTD_human;HPO |
Tgene | RAI1 | C3887612 | Psychomotor Agitation | 1 | CTD_human |