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Fusion gene ID: 19890 |
FusionGeneSummary for LMF1_CCDC154 |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: LMF1_CCDC154 | Fusion gene ID: 19890 | Hgene | Tgene | Gene symbol | LMF1 | CCDC154 | Gene ID | 64788 | 645811 |
| Gene name | lipase maturation factor 1 | coiled-coil domain containing 154 | |
| Synonyms | C16orf26|HMFN1876|JFP11|TMEM112|TMEM112A | C16orf29 | |
| Cytomap | 16p13.3 | 16p13.3 | |
| Type of gene | protein-coding | protein-coding | |
| Description | lipase maturation factor 1transmembrane protein 112 | coiled-coil domain-containing protein 154 | |
| Modification date | 20180523 | 20180519 | |
| UniProtAcc | Q96S06 | A6NI56 | |
| Ensembl transtripts involved in fusion gene | ENST00000262301, ENST00000399843, ENST00000543238, ENST00000568897, ENST00000568268, ENST00000539379, | ENST00000409671, ENST00000389176, | |
| Fusion gene scores | * DoF score | 2 X 2 X 2=8 | 1 X 1 X 1=1 |
| # samples | 2 | 1 | |
| ** MAII score | log2(2/8*10)=1.32192809488736 | log2(1/1*10)=3.32192809488736 | |
| Context | PubMed: LMF1 [Title/Abstract] AND CCDC154 [Title/Abstract] AND fusion [Title/Abstract] | ||
| Functional or gene categories assigned by FusionGDB annotation | Tumor suppressor gene involved fusion gene, in-frame but not retained their domain. Tumor suppressor gene involved fusion gene, retained protein feature but frameshift. DDR (DNA damage repair) gene involved fusion gene, in-frame but not retained their domain. | ||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| TCGA | RV | LGG | TCGA-DU-A6S2-01A | LMF1 | chr16 | 960931 | - | CCDC154 | chr16 | 1489127 | - |
| * LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
| Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| In-frame | ENST00000262301 | ENST00000409671 | LMF1 | chr16 | 960931 | - | CCDC154 | chr16 | 1489127 | - |
| In-frame | ENST00000262301 | ENST00000389176 | LMF1 | chr16 | 960931 | - | CCDC154 | chr16 | 1489127 | - |
| In-frame | ENST00000399843 | ENST00000409671 | LMF1 | chr16 | 960931 | - | CCDC154 | chr16 | 1489127 | - |
| In-frame | ENST00000399843 | ENST00000389176 | LMF1 | chr16 | 960931 | - | CCDC154 | chr16 | 1489127 | - |
| intron-3CDS | ENST00000543238 | ENST00000409671 | LMF1 | chr16 | 960931 | - | CCDC154 | chr16 | 1489127 | - |
| intron-3CDS | ENST00000543238 | ENST00000389176 | LMF1 | chr16 | 960931 | - | CCDC154 | chr16 | 1489127 | - |
| In-frame | ENST00000568897 | ENST00000409671 | LMF1 | chr16 | 960931 | - | CCDC154 | chr16 | 1489127 | - |
| In-frame | ENST00000568897 | ENST00000389176 | LMF1 | chr16 | 960931 | - | CCDC154 | chr16 | 1489127 | - |
| intron-3CDS | ENST00000568268 | ENST00000409671 | LMF1 | chr16 | 960931 | - | CCDC154 | chr16 | 1489127 | - |
| intron-3CDS | ENST00000568268 | ENST00000389176 | LMF1 | chr16 | 960931 | - | CCDC154 | chr16 | 1489127 | - |
| 3UTR-3CDS | ENST00000539379 | ENST00000409671 | LMF1 | chr16 | 960931 | - | CCDC154 | chr16 | 1489127 | - |
| 3UTR-3CDS | ENST00000539379 | ENST00000389176 | LMF1 | chr16 | 960931 | - | CCDC154 | chr16 | 1489127 | - |
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FusionProtFeatures for LMF1_CCDC154 |
| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| LMF1 | CCDC154 |
| Involved in the maturation of specific proteins in theendoplasmic reticulum. Required for maturation and transport ofactive lipoprotein lipase (LPL) through the secretory pathway.Each LMF1 molecule chaperones 50 or more molecules of LPL.{ECO:0000250|UniProtKB:Q3U3R4, ECO:0000269|PubMed:24909692}. |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
| - In-frame and retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | LMF1 | chr16:960931 | chr16:1489127 | ENST00000262301 | - | 4 | 11 | 152_207 | 221 | 568 | Topological domain | Cytoplasmic |
| Hgene | LMF1 | chr16:960931 | chr16:1489127 | ENST00000262301 | - | 4 | 11 | 1_49 | 221 | 568 | Topological domain | Cytoplasmic |
| Hgene | LMF1 | chr16:960931 | chr16:1489127 | ENST00000262301 | - | 4 | 11 | 73_127 | 221 | 568 | Topological domain | Lumenal |
| Hgene | LMF1 | chr16:960931 | chr16:1489127 | ENST00000262301 | - | 4 | 11 | 128_151 | 221 | 568 | Transmembrane | Helical |
| Hgene | LMF1 | chr16:960931 | chr16:1489127 | ENST00000262301 | - | 4 | 11 | 208_221 | 221 | 568 | Transmembrane | Helical |
| Hgene | LMF1 | chr16:960931 | chr16:1489127 | ENST00000262301 | - | 4 | 11 | 50_72 | 221 | 568 | Transmembrane | Helical |
| Tgene | >CCDC154 | chr16:960931 | chr16:1489127 | ENST00000389176 | - | 5 | 17 | 393_419 | 225 | 675 | Coiled coil | Ontology_term=ECO:0000255 |
| Tgene | >CCDC154 | chr16:960931 | chr16:1489127 | ENST00000389176 | - | 5 | 17 | 466_530 | 225 | 675 | Coiled coil | Ontology_term=ECO:0000255 |
| - In-frame and not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | >LMF1 | chr16:960931 | chr16:1489127 | ENST00000262301 | - | 4 | 11 | 222_292 | 221 | 568 | Topological domain | Lumenal |
| Hgene | >LMF1 | chr16:960931 | chr16:1489127 | ENST00000262301 | - | 4 | 11 | 322_367 | 221 | 568 | Topological domain | Cytoplasmic |
| Hgene | >LMF1 | chr16:960931 | chr16:1489127 | ENST00000262301 | - | 4 | 11 | 389_567 | 221 | 568 | Topological domain | Lumenal |
| Hgene | >LMF1 | chr16:960931 | chr16:1489127 | ENST00000262301 | - | 4 | 11 | 293_321 | 221 | 568 | Transmembrane | Helical |
| Hgene | >LMF1 | chr16:960931 | chr16:1489127 | ENST00000262301 | - | 4 | 11 | 368_388 | 221 | 568 | Transmembrane | Helical |
| Tgene | CCDC154 | chr16:960931 | chr16:1489127 | ENST00000389176 | - | 5 | 17 | 215_302 | 225 | 675 | Coiled coil | Ontology_term=ECO:0000255 |
| Tgene | CCDC154 | chr16:960931 | chr16:1489127 | ENST00000389176 | - | 5 | 17 | 76_182 | 225 | 675 | Coiled coil | Ontology_term=ECO:0000255 |
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FusionGeneSequence for LMF1_CCDC154 |
| For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
| * Fusion amino acid sequences. |
| >In-frame_LMF1_ENST00000262301_chr16_960931_-_CCDC154_ENST00000409671_chr16_1489127_-_664aa MRPDSPTMAAPAESLRRRKTGYSDPEPESPPAPGRGPAGSPAHLHTGTFWLTRIVLLKALAFVYFVAFLVAFHQNKQLIGDRGLLPCRVF LKNFQQYFQDRTSWEVFSYMPTILWLMDWSDMNSNLDLLALLGLGISSFVLITGCANMLLMAALWGLYMSLVNVGHVWYSFGWESQLLET GFLGIFLCPLWTLSRLPQHTPTSRIVLWGFRWLIFRIMLGAAQVTKLGEEVSLRFLKREAKLCGFLQKSFLALEKRMKASESSRLKLEGS LRGELESRWEKLRGLMEERLRALQGQHEESHLLEQCQGLDAAVAQLTKFVQQNQASLNRVLLAEEKAWDAKGRLEESRAGELAAYVQENL EAAQLAGELARQEMHGELVLLREKSRALEASVAQLAGQLKELSGHLPALSSRLDLQEQMLGLRLSEAKTEWEGAERKSLEDLARWRKEVT EHLRGVREKVDGLPQQIESVSDKCLLHKSDSDLRISAEGKAREFKVGALRQELATLLSSVQLLKEDNPGRKIAEMQGKLATFQNQIMKLE NCVQANKTIQNLRFNTEARLRTQEMATLWESVLRLWSEEGPRTPLGSWKALPSLVRPRVFIKDMAPGKVVPMNCWGVYQAVRWLRWKASL >In-frame_LMF1_ENST00000262301_chr16_960931_-_CCDC154_ENST00000389176_chr16_1489127_-_671aa MRPDSPTMAAPAESLRRRKTGYSDPEPESPPAPGRGPAGSPAHLHTGTFWLTRIVLLKALAFVYFVAFLVAFHQNKQLIGDRGLLPCRVF LKNFQQYFQDRTSWEVFSYMPTILWLMDWSDMNSNLDLLALLGLGISSFVLITGCANMLLMAALWGLYMSLVNVGHVWYSFGWESQLLET GFLGIFLCPLWTLSRLPQHTPTSRIVLWGFRWLIFRIMLGAAQVTKLGEEVSLRFLKREAKLCGFLQKSFLALEKRMKASESSRLKLEGS LRGELESRWEKLRGLMEERLRALQGQHEVGPGGRRAEESHLLEQCQGLDAAVAQLTKFVQQNQASLNRVLLAEEKAWDAKGRLEESRAGE LAAYVQENLEAAQLAGELARQEMHGELVLLREKSRALEASVAQLAGQLKELSGHLPALSSRLDLQEQMLGLRLSEAKTEWEGAERKSLED LARWRKEVTEHLRGVREKVDGLPQQIESVSDKCLLHKSDSDLRISAEGKAREFKVGALRQELATLLSSVQLLKEDNPGRKIAEMQGKLAT NQIMKLENCVQANKTIQNLRFNTEARLRTQEMATLWESVLRLWSEEGPRTPLGSWKALPSLVRPRVFIKDMAPGKVVPMNCWGVYQAVRW >In-frame_LMF1_ENST00000399843_chr16_960931_-_CCDC154_ENST00000409671_chr16_1489127_-_664aa MRPDSPTMAAPAESLRRRKTGYSDPEPESPPAPGRGPAGSPAHLHTGTFWLTRIVLLKALAFVYFVAFLVAFHQNKQLIGDRGLLPCRVF LKNFQQYFQDRTSWEVFSYMPTILWLMDWSDMNSNLDLLALLGLGISSFVLITGCANMLLMAALWGLYMSLVNVGHVWYSFRWESQLLET GFLGIFLCPLWTLSRLPQHTPTSRIVLWGFRWLIFRIMLGAAQVTKLGEEVSLRFLKREAKLCGFLQKSFLALEKRMKASESSRLKLEGS LRGELESRWEKLRGLMEERLRALQGQHEESHLLEQCQGLDAAVAQLTKFVQQNQASLNRVLLAEEKAWDAKGRLEESRAGELAAYVQENL EAAQLAGELARQEMHGELVLLREKSRALEASVAQLAGQLKELSGHLPALSSRLDLQEQMLGLRLSEAKTEWEGAERKSLEDLARWRKEVT EHLRGVREKVDGLPQQIESVSDKCLLHKSDSDLRISAEGKAREFKVGALRQELATLLSSVQLLKEDNPGRKIAEMQGKLATFQNQIMKLE NCVQANKTIQNLRFNTEARLRTQEMATLWESVLRLWSEEGPRTPLGSWKALPSLVRPRVFIKDMAPGKVVPMNCWGVYQAVRWLRWKASL >In-frame_LMF1_ENST00000399843_chr16_960931_-_CCDC154_ENST00000389176_chr16_1489127_-_671aa MRPDSPTMAAPAESLRRRKTGYSDPEPESPPAPGRGPAGSPAHLHTGTFWLTRIVLLKALAFVYFVAFLVAFHQNKQLIGDRGLLPCRVF LKNFQQYFQDRTSWEVFSYMPTILWLMDWSDMNSNLDLLALLGLGISSFVLITGCANMLLMAALWGLYMSLVNVGHVWYSFRWESQLLET GFLGIFLCPLWTLSRLPQHTPTSRIVLWGFRWLIFRIMLGAAQVTKLGEEVSLRFLKREAKLCGFLQKSFLALEKRMKASESSRLKLEGS LRGELESRWEKLRGLMEERLRALQGQHEVGPGGRRAEESHLLEQCQGLDAAVAQLTKFVQQNQASLNRVLLAEEKAWDAKGRLEESRAGE LAAYVQENLEAAQLAGELARQEMHGELVLLREKSRALEASVAQLAGQLKELSGHLPALSSRLDLQEQMLGLRLSEAKTEWEGAERKSLED LARWRKEVTEHLRGVREKVDGLPQQIESVSDKCLLHKSDSDLRISAEGKAREFKVGALRQELATLLSSVQLLKEDNPGRKIAEMQGKLAT NQIMKLENCVQANKTIQNLRFNTEARLRTQEMATLWESVLRLWSEEGPRTPLGSWKALPSLVRPRVFIKDMAPGKVVPMNCWGVYQAVRW >In-frame_LMF1_ENST00000568897_chr16_960931_-_CCDC154_ENST00000409671_chr16_1489127_-_447aa MLGAAQVTKLGEEVSLRFLKREAKLCGFLQKSFLALEKRMKASESSRLKLEGSLRGELESRWEKLRGLMEERLRALQGQHEESHLLEQCQ GLDAAVAQLTKFVQQNQASLNRVLLAEEKAWDAKGRLEESRAGELAAYVQENLEAAQLAGELARQEMHGELVLLREKSRALEASVAQLAG QLKELSGHLPALSSRLDLQEQMLGLRLSEAKTEWEGAERKSLEDLARWRKEVTEHLRGVREKVDGLPQQIESVSDKCLLHKSDSDLRISA EGKAREFKVGALRQELATLLSSVQLLKEDNPGRKIAEMQGKLATFQNQIMKLENCVQANKTIQNLRFNTEARLRTQEMATLWESVLRLWS >In-frame_LMF1_ENST00000568897_chr16_960931_-_CCDC154_ENST00000389176_chr16_1489127_-_454aa MLGAAQVTKLGEEVSLRFLKREAKLCGFLQKSFLALEKRMKASESSRLKLEGSLRGELESRWEKLRGLMEERLRALQGQHEVGPGGRRAE ESHLLEQCQGLDAAVAQLTKFVQQNQASLNRVLLAEEKAWDAKGRLEESRAGELAAYVQENLEAAQLAGELARQEMHGELVLLREKSRAL EASVAQLAGQLKELSGHLPALSSRLDLQEQMLGLRLSEAKTEWEGAERKSLEDLARWRKEVTEHLRGVREKVDGLPQQIESVSDKCLLHK SDSDLRISAEGKAREFKVGALRQELATLLSSVQLLKEDNPGRKIAEMQGKLATNQIMKLENCVQANKTIQNLRFNTEARLRTQEMATLWE SVLRLWSEEGPRTPLGSWKALPSLVRPRVFIKDMAPGKVVPMNCWGVYQAVRWLRWKASLIKLRALRRPGGVLEKPHSQEQVQQLTPSLF |
| * Fusion transcript sequences (only coding sequence (CDS) region). |
| >In-frame_LMF1_ENST00000262301_chr16_960931_-_CCDC154_ENST00000409671_chr16_1489127_-_1992nt ATGCGCCCTGACAGCCCAACAATGGCGGCGCCCGCGGAGTCGCTGAGGAGGCGGAAGACTGGGTACTCGGATCCGGAGCCTGAGTCGCCG CCCGCGCCGGGGCGTGGCCCCGCAGGCTCTCCGGCCCATCTCCACACGGGCACCTTCTGGCTGACCCGGATCGTGCTCCTGAAGGCCCTA GCCTTCGTGTACTTCGTGGCATTCCTGGTGGCTTTCCATCAGAACAAGCAGCTCATCGGTGACAGGGGGCTGCTTCCCTGCAGAGTGTTC CTGAAGAACTTCCAGCAGTACTTCCAGGACAGGACGAGCTGGGAAGTCTTCAGCTACATGCCCACCATCCTCTGGCTGATGGACTGGTCA GACATGAACTCCAACCTGGACTTGCTGGCTCTTCTCGGACTGGGCATCTCGTCTTTCGTACTGATCACGGGCTGCGCCAACATGCTTCTC ATGGCTGCCCTGTGGGGCCTCTACATGTCCCTGGTTAATGTGGGCCATGTCTGGTACTCTTTCGGATGGGAGTCCCAGCTTCTGGAGACG GGGTTCCTGGGGATCTTCCTGTGCCCTCTGTGGACGCTGTCAAGGCTGCCCCAGCATACCCCCACATCCCGGATTGTCCTGTGGGGCTTC CGGTGGCTGATCTTCAGGATCATGCTTGGAGCAGCCCAGGTGACCAAGCTCGGCGAAGAGGTGAGCCTGCGCTTCCTGAAGAGGGAGGCC AAGCTGTGCGGCTTCCTGCAGAAGAGCTTCCTGGCCCTGGAGAAGAGAATGAAGGCCTCGGAGAGCTCACGGCTGAAGCTGGAGGGCAGC CTGCGGGGCGAGCTGGAGAGCCGGTGGGAGAAGCTTCGGGGGCTGATGGAGGAGCGCCTGCGGGCCCTGCAGGGGCAGCATGAGGAGAGC CACCTCCTGGAGCAGTGCCAGGGCCTGGATGCTGCCGTGGCCCAGCTGACCAAGTTTGTGCAGCAGAACCAGGCGTCGCTGAACCGTGTC CTACTGGCCGAGGAGAAAGCCTGGGACGCCAAGGGGCGCTTGGAGGAAAGCCGGGCTGGGGAGCTGGCCGCCTATGTGCAGGAGAACCTG GAGGCCGCACAGCTGGCTGGCGAGCTGGCCCGGCAGGAGATGCATGGAGAGCTGGTGCTGCTCCGAGAGAAGAGCCGGGCTCTGGAGGCA TCCGTGGCGCAGCTGGCCGGGCAGTTAAAGGAGCTGAGTGGCCATCTCCCGGCTCTGAGCAGCCGGCTCGATCTGCAGGAGCAGATGCTG GGCCTCAGGCTGTCCGAGGCAAAGACCGAATGGGAAGGTGCAGAGAGGAAGTCCCTGGAGGACCTGGCCAGGTGGCGGAAGGAGGTGACC GAACACCTGCGAGGGGTGCGGGAGAAGGTGGATGGCCTCCCCCAGCAGATAGAGAGTGTCTCCGACAAGTGCCTGCTTCATAAGAGCGAC TCAGACCTCAGGATTTCCGCCGAAGGCAAGGCCAGGGAGTTCAAGGTTGGGGCCCTGCGGCAGGAGCTGGCCACGCTACTATCATCCGTG CAGCTGCTAAAGGAAGACAACCCTGGGCGGAAGATCGCGGAGATGCAGGGCAAGCTGGCCACGTTTCAGAACCAAATAATGAAGCTGGAA AACTGCGTCCAGGCCAACAAGACCATCCAGAACCTCAGGTTCAACACTGAGGCCCGGCTGCGCACGCAGGAGATGGCCACCCTGTGGGAG AGTGTGCTCCGGCTGTGGAGTGAGGAGGGCCCGCGGACGCCGCTGGGCAGCTGGAAGGCGCTCCCATCCCTGGTGAGGCCGCGGGTCTTC ATCAAGGACATGGCGCCTGGCAAGGTGGTGCCCATGAACTGCTGGGGCGTGTACCAGGCTGTGAGGTGGCTGCGCTGGAAGGCGTCCCTC ATAAAGCTCAGGGCCCTGCGGAGGCCAGGAGGGGTCCTGGAGAAGCCCCACAGCCAGGAGCAGGTGCAGCAGCTCACACCCTCACTGTTT >In-frame_LMF1_ENST00000262301_chr16_960931_-_CCDC154_ENST00000389176_chr16_1489127_-_2013nt ATGCGCCCTGACAGCCCAACAATGGCGGCGCCCGCGGAGTCGCTGAGGAGGCGGAAGACTGGGTACTCGGATCCGGAGCCTGAGTCGCCG CCCGCGCCGGGGCGTGGCCCCGCAGGCTCTCCGGCCCATCTCCACACGGGCACCTTCTGGCTGACCCGGATCGTGCTCCTGAAGGCCCTA GCCTTCGTGTACTTCGTGGCATTCCTGGTGGCTTTCCATCAGAACAAGCAGCTCATCGGTGACAGGGGGCTGCTTCCCTGCAGAGTGTTC CTGAAGAACTTCCAGCAGTACTTCCAGGACAGGACGAGCTGGGAAGTCTTCAGCTACATGCCCACCATCCTCTGGCTGATGGACTGGTCA GACATGAACTCCAACCTGGACTTGCTGGCTCTTCTCGGACTGGGCATCTCGTCTTTCGTACTGATCACGGGCTGCGCCAACATGCTTCTC ATGGCTGCCCTGTGGGGCCTCTACATGTCCCTGGTTAATGTGGGCCATGTCTGGTACTCTTTCGGATGGGAGTCCCAGCTTCTGGAGACG GGGTTCCTGGGGATCTTCCTGTGCCCTCTGTGGACGCTGTCAAGGCTGCCCCAGCATACCCCCACATCCCGGATTGTCCTGTGGGGCTTC CGGTGGCTGATCTTCAGGATCATGCTTGGAGCAGCCCAGGTGACCAAGCTCGGCGAAGAGGTGAGCCTGCGCTTCCTGAAGAGGGAGGCC AAGCTGTGCGGCTTCCTGCAGAAGAGCTTCCTGGCCCTGGAGAAGAGAATGAAGGCCTCGGAGAGCTCACGGCTGAAGCTGGAGGGCAGC CTGCGGGGCGAGCTGGAGAGCCGGTGGGAGAAGCTTCGGGGGCTGATGGAGGAGCGCCTGCGGGCCCTGCAGGGGCAGCATGAGGTGGGG CCGGGCGGGCGGCGGGCAGAGGAGAGCCACCTCCTGGAGCAGTGCCAGGGCCTGGATGCTGCCGTGGCCCAGCTGACCAAGTTTGTGCAG CAGAACCAGGCGTCGCTGAACCGTGTCCTACTGGCCGAGGAGAAAGCCTGGGACGCCAAGGGGCGCTTGGAGGAAAGCCGGGCTGGGGAG CTGGCCGCCTATGTGCAGGAGAACCTGGAGGCCGCACAGCTGGCTGGCGAGCTGGCCCGGCAGGAGATGCATGGAGAGCTGGTGCTGCTC CGAGAGAAGAGCCGGGCTCTGGAGGCATCCGTGGCGCAGCTGGCCGGGCAGTTAAAGGAGCTGAGTGGCCATCTCCCGGCTCTGAGCAGC CGGCTCGATCTGCAGGAGCAGATGCTGGGCCTCAGGCTGTCCGAGGCAAAGACCGAATGGGAAGGTGCAGAGAGGAAGTCCCTGGAGGAC CTGGCCAGGTGGCGGAAGGAGGTGACCGAACACCTGCGAGGGGTGCGGGAGAAGGTGGATGGCCTCCCCCAGCAGATAGAGAGTGTCTCC GACAAGTGCCTGCTTCATAAGAGCGACTCAGACCTCAGGATTTCCGCCGAAGGCAAGGCCAGGGAGTTCAAGGTTGGGGCCCTGCGGCAG GAGCTGGCCACGCTACTATCATCCGTGCAGCTGCTAAAGGAAGACAACCCTGGGCGGAAGATCGCGGAGATGCAGGGCAAGCTGGCCACG AACCAAATAATGAAGCTGGAAAACTGCGTCCAGGCCAACAAGACCATCCAGAACCTCAGGTTCAACACTGAGGCCCGGCTGCGCACGCAG GAGATGGCCACCCTGTGGGAGAGTGTGCTCCGGCTGTGGAGTGAGGAGGGCCCGCGGACGCCGCTGGGCAGCTGGAAGGCGCTCCCATCC CTGGTGAGGCCGCGGGTCTTCATCAAGGACATGGCGCCTGGCAAGGTGGTGCCCATGAACTGCTGGGGCGTGTACCAGGCTGTGAGGTGG CTGCGCTGGAAGGCGTCCCTCATAAAGCTCAGGGCCCTGCGGAGGCCAGGAGGGGTCCTGGAGAAGCCCCACAGCCAGGAGCAGGTGCAG >In-frame_LMF1_ENST00000399843_chr16_960931_-_CCDC154_ENST00000409671_chr16_1489127_-_1992nt ATGCGCCCTGACAGCCCAACAATGGCGGCGCCCGCGGAGTCGCTGAGGAGGCGGAAGACTGGGTACTCGGATCCGGAGCCTGAGTCGCCG CCCGCGCCGGGGCGTGGCCCCGCAGGCTCTCCGGCCCATCTCCACACGGGCACCTTCTGGCTGACCCGGATCGTGCTCCTGAAGGCCCTA GCCTTCGTGTACTTCGTGGCATTCCTGGTGGCTTTCCATCAGAACAAGCAGCTCATCGGTGACAGGGGGCTGCTTCCCTGCAGAGTGTTC CTGAAGAACTTCCAGCAGTACTTCCAGGACAGGACGAGCTGGGAAGTCTTCAGCTACATGCCCACCATCCTCTGGCTGATGGACTGGTCA GACATGAACTCCAACCTGGACTTGCTGGCTCTTCTCGGACTGGGCATCTCGTCTTTCGTACTGATCACGGGCTGCGCCAACATGCTTCTC ATGGCTGCCCTGTGGGGCCTCTACATGTCCCTGGTTAATGTGGGCCATGTCTGGTATTCCTTCAGATGGGAGTCCCAGCTTCTGGAGACG GGGTTCCTGGGGATCTTCCTGTGCCCTCTGTGGACGCTGTCAAGGCTGCCCCAGCATACCCCCACATCCCGGATTGTCCTGTGGGGCTTC CGGTGGCTGATCTTCAGGATCATGCTTGGAGCAGCCCAGGTGACCAAGCTCGGCGAAGAGGTGAGCCTGCGCTTCCTGAAGAGGGAGGCC AAGCTGTGCGGCTTCCTGCAGAAGAGCTTCCTGGCCCTGGAGAAGAGAATGAAGGCCTCGGAGAGCTCACGGCTGAAGCTGGAGGGCAGC CTGCGGGGCGAGCTGGAGAGCCGGTGGGAGAAGCTTCGGGGGCTGATGGAGGAGCGCCTGCGGGCCCTGCAGGGGCAGCATGAGGAGAGC CACCTCCTGGAGCAGTGCCAGGGCCTGGATGCTGCCGTGGCCCAGCTGACCAAGTTTGTGCAGCAGAACCAGGCGTCGCTGAACCGTGTC CTACTGGCCGAGGAGAAAGCCTGGGACGCCAAGGGGCGCTTGGAGGAAAGCCGGGCTGGGGAGCTGGCCGCCTATGTGCAGGAGAACCTG GAGGCCGCACAGCTGGCTGGCGAGCTGGCCCGGCAGGAGATGCATGGAGAGCTGGTGCTGCTCCGAGAGAAGAGCCGGGCTCTGGAGGCA TCCGTGGCGCAGCTGGCCGGGCAGTTAAAGGAGCTGAGTGGCCATCTCCCGGCTCTGAGCAGCCGGCTCGATCTGCAGGAGCAGATGCTG GGCCTCAGGCTGTCCGAGGCAAAGACCGAATGGGAAGGTGCAGAGAGGAAGTCCCTGGAGGACCTGGCCAGGTGGCGGAAGGAGGTGACC GAACACCTGCGAGGGGTGCGGGAGAAGGTGGATGGCCTCCCCCAGCAGATAGAGAGTGTCTCCGACAAGTGCCTGCTTCATAAGAGCGAC TCAGACCTCAGGATTTCCGCCGAAGGCAAGGCCAGGGAGTTCAAGGTTGGGGCCCTGCGGCAGGAGCTGGCCACGCTACTATCATCCGTG CAGCTGCTAAAGGAAGACAACCCTGGGCGGAAGATCGCGGAGATGCAGGGCAAGCTGGCCACGTTTCAGAACCAAATAATGAAGCTGGAA AACTGCGTCCAGGCCAACAAGACCATCCAGAACCTCAGGTTCAACACTGAGGCCCGGCTGCGCACGCAGGAGATGGCCACCCTGTGGGAG AGTGTGCTCCGGCTGTGGAGTGAGGAGGGCCCGCGGACGCCGCTGGGCAGCTGGAAGGCGCTCCCATCCCTGGTGAGGCCGCGGGTCTTC ATCAAGGACATGGCGCCTGGCAAGGTGGTGCCCATGAACTGCTGGGGCGTGTACCAGGCTGTGAGGTGGCTGCGCTGGAAGGCGTCCCTC ATAAAGCTCAGGGCCCTGCGGAGGCCAGGAGGGGTCCTGGAGAAGCCCCACAGCCAGGAGCAGGTGCAGCAGCTCACACCCTCACTGTTT >In-frame_LMF1_ENST00000399843_chr16_960931_-_CCDC154_ENST00000389176_chr16_1489127_-_2013nt ATGCGCCCTGACAGCCCAACAATGGCGGCGCCCGCGGAGTCGCTGAGGAGGCGGAAGACTGGGTACTCGGATCCGGAGCCTGAGTCGCCG CCCGCGCCGGGGCGTGGCCCCGCAGGCTCTCCGGCCCATCTCCACACGGGCACCTTCTGGCTGACCCGGATCGTGCTCCTGAAGGCCCTA GCCTTCGTGTACTTCGTGGCATTCCTGGTGGCTTTCCATCAGAACAAGCAGCTCATCGGTGACAGGGGGCTGCTTCCCTGCAGAGTGTTC CTGAAGAACTTCCAGCAGTACTTCCAGGACAGGACGAGCTGGGAAGTCTTCAGCTACATGCCCACCATCCTCTGGCTGATGGACTGGTCA GACATGAACTCCAACCTGGACTTGCTGGCTCTTCTCGGACTGGGCATCTCGTCTTTCGTACTGATCACGGGCTGCGCCAACATGCTTCTC ATGGCTGCCCTGTGGGGCCTCTACATGTCCCTGGTTAATGTGGGCCATGTCTGGTATTCCTTCAGATGGGAGTCCCAGCTTCTGGAGACG GGGTTCCTGGGGATCTTCCTGTGCCCTCTGTGGACGCTGTCAAGGCTGCCCCAGCATACCCCCACATCCCGGATTGTCCTGTGGGGCTTC CGGTGGCTGATCTTCAGGATCATGCTTGGAGCAGCCCAGGTGACCAAGCTCGGCGAAGAGGTGAGCCTGCGCTTCCTGAAGAGGGAGGCC AAGCTGTGCGGCTTCCTGCAGAAGAGCTTCCTGGCCCTGGAGAAGAGAATGAAGGCCTCGGAGAGCTCACGGCTGAAGCTGGAGGGCAGC CTGCGGGGCGAGCTGGAGAGCCGGTGGGAGAAGCTTCGGGGGCTGATGGAGGAGCGCCTGCGGGCCCTGCAGGGGCAGCATGAGGTGGGG CCGGGCGGGCGGCGGGCAGAGGAGAGCCACCTCCTGGAGCAGTGCCAGGGCCTGGATGCTGCCGTGGCCCAGCTGACCAAGTTTGTGCAG CAGAACCAGGCGTCGCTGAACCGTGTCCTACTGGCCGAGGAGAAAGCCTGGGACGCCAAGGGGCGCTTGGAGGAAAGCCGGGCTGGGGAG CTGGCCGCCTATGTGCAGGAGAACCTGGAGGCCGCACAGCTGGCTGGCGAGCTGGCCCGGCAGGAGATGCATGGAGAGCTGGTGCTGCTC CGAGAGAAGAGCCGGGCTCTGGAGGCATCCGTGGCGCAGCTGGCCGGGCAGTTAAAGGAGCTGAGTGGCCATCTCCCGGCTCTGAGCAGC CGGCTCGATCTGCAGGAGCAGATGCTGGGCCTCAGGCTGTCCGAGGCAAAGACCGAATGGGAAGGTGCAGAGAGGAAGTCCCTGGAGGAC CTGGCCAGGTGGCGGAAGGAGGTGACCGAACACCTGCGAGGGGTGCGGGAGAAGGTGGATGGCCTCCCCCAGCAGATAGAGAGTGTCTCC GACAAGTGCCTGCTTCATAAGAGCGACTCAGACCTCAGGATTTCCGCCGAAGGCAAGGCCAGGGAGTTCAAGGTTGGGGCCCTGCGGCAG GAGCTGGCCACGCTACTATCATCCGTGCAGCTGCTAAAGGAAGACAACCCTGGGCGGAAGATCGCGGAGATGCAGGGCAAGCTGGCCACG AACCAAATAATGAAGCTGGAAAACTGCGTCCAGGCCAACAAGACCATCCAGAACCTCAGGTTCAACACTGAGGCCCGGCTGCGCACGCAG GAGATGGCCACCCTGTGGGAGAGTGTGCTCCGGCTGTGGAGTGAGGAGGGCCCGCGGACGCCGCTGGGCAGCTGGAAGGCGCTCCCATCC CTGGTGAGGCCGCGGGTCTTCATCAAGGACATGGCGCCTGGCAAGGTGGTGCCCATGAACTGCTGGGGCGTGTACCAGGCTGTGAGGTGG CTGCGCTGGAAGGCGTCCCTCATAAAGCTCAGGGCCCTGCGGAGGCCAGGAGGGGTCCTGGAGAAGCCCCACAGCCAGGAGCAGGTGCAG >In-frame_LMF1_ENST00000568897_chr16_960931_-_CCDC154_ENST00000409671_chr16_1489127_-_1341nt ATGCTTGGAGCAGCCCAGGTGACCAAGCTCGGCGAAGAGGTGAGCCTGCGCTTCCTGAAGAGGGAGGCCAAGCTGTGCGGCTTCCTGCAG AAGAGCTTCCTGGCCCTGGAGAAGAGAATGAAGGCCTCGGAGAGCTCACGGCTGAAGCTGGAGGGCAGCCTGCGGGGCGAGCTGGAGAGC CGGTGGGAGAAGCTTCGGGGGCTGATGGAGGAGCGCCTGCGGGCCCTGCAGGGGCAGCATGAGGAGAGCCACCTCCTGGAGCAGTGCCAG GGCCTGGATGCTGCCGTGGCCCAGCTGACCAAGTTTGTGCAGCAGAACCAGGCGTCGCTGAACCGTGTCCTACTGGCCGAGGAGAAAGCC TGGGACGCCAAGGGGCGCTTGGAGGAAAGCCGGGCTGGGGAGCTGGCCGCCTATGTGCAGGAGAACCTGGAGGCCGCACAGCTGGCTGGC GAGCTGGCCCGGCAGGAGATGCATGGAGAGCTGGTGCTGCTCCGAGAGAAGAGCCGGGCTCTGGAGGCATCCGTGGCGCAGCTGGCCGGG CAGTTAAAGGAGCTGAGTGGCCATCTCCCGGCTCTGAGCAGCCGGCTCGATCTGCAGGAGCAGATGCTGGGCCTCAGGCTGTCCGAGGCA AAGACCGAATGGGAAGGTGCAGAGAGGAAGTCCCTGGAGGACCTGGCCAGGTGGCGGAAGGAGGTGACCGAACACCTGCGAGGGGTGCGG GAGAAGGTGGATGGCCTCCCCCAGCAGATAGAGAGTGTCTCCGACAAGTGCCTGCTTCATAAGAGCGACTCAGACCTCAGGATTTCCGCC GAAGGCAAGGCCAGGGAGTTCAAGGTTGGGGCCCTGCGGCAGGAGCTGGCCACGCTACTATCATCCGTGCAGCTGCTAAAGGAAGACAAC CCTGGGCGGAAGATCGCGGAGATGCAGGGCAAGCTGGCCACGTTTCAGAACCAAATAATGAAGCTGGAAAACTGCGTCCAGGCCAACAAG ACCATCCAGAACCTCAGGTTCAACACTGAGGCCCGGCTGCGCACGCAGGAGATGGCCACCCTGTGGGAGAGTGTGCTCCGGCTGTGGAGT GAGGAGGGCCCGCGGACGCCGCTGGGCAGCTGGAAGGCGCTCCCATCCCTGGTGAGGCCGCGGGTCTTCATCAAGGACATGGCGCCTGGC AAGGTGGTGCCCATGAACTGCTGGGGCGTGTACCAGGCTGTGAGGTGGCTGCGCTGGAAGGCGTCCCTCATAAAGCTCAGGGCCCTGCGG >In-frame_LMF1_ENST00000568897_chr16_960931_-_CCDC154_ENST00000389176_chr16_1489127_-_1362nt ATGCTTGGAGCAGCCCAGGTGACCAAGCTCGGCGAAGAGGTGAGCCTGCGCTTCCTGAAGAGGGAGGCCAAGCTGTGCGGCTTCCTGCAG AAGAGCTTCCTGGCCCTGGAGAAGAGAATGAAGGCCTCGGAGAGCTCACGGCTGAAGCTGGAGGGCAGCCTGCGGGGCGAGCTGGAGAGC CGGTGGGAGAAGCTTCGGGGGCTGATGGAGGAGCGCCTGCGGGCCCTGCAGGGGCAGCATGAGGTGGGGCCGGGCGGGCGGCGGGCAGAG GAGAGCCACCTCCTGGAGCAGTGCCAGGGCCTGGATGCTGCCGTGGCCCAGCTGACCAAGTTTGTGCAGCAGAACCAGGCGTCGCTGAAC CGTGTCCTACTGGCCGAGGAGAAAGCCTGGGACGCCAAGGGGCGCTTGGAGGAAAGCCGGGCTGGGGAGCTGGCCGCCTATGTGCAGGAG AACCTGGAGGCCGCACAGCTGGCTGGCGAGCTGGCCCGGCAGGAGATGCATGGAGAGCTGGTGCTGCTCCGAGAGAAGAGCCGGGCTCTG GAGGCATCCGTGGCGCAGCTGGCCGGGCAGTTAAAGGAGCTGAGTGGCCATCTCCCGGCTCTGAGCAGCCGGCTCGATCTGCAGGAGCAG ATGCTGGGCCTCAGGCTGTCCGAGGCAAAGACCGAATGGGAAGGTGCAGAGAGGAAGTCCCTGGAGGACCTGGCCAGGTGGCGGAAGGAG GTGACCGAACACCTGCGAGGGGTGCGGGAGAAGGTGGATGGCCTCCCCCAGCAGATAGAGAGTGTCTCCGACAAGTGCCTGCTTCATAAG AGCGACTCAGACCTCAGGATTTCCGCCGAAGGCAAGGCCAGGGAGTTCAAGGTTGGGGCCCTGCGGCAGGAGCTGGCCACGCTACTATCA TCCGTGCAGCTGCTAAAGGAAGACAACCCTGGGCGGAAGATCGCGGAGATGCAGGGCAAGCTGGCCACGAACCAAATAATGAAGCTGGAA AACTGCGTCCAGGCCAACAAGACCATCCAGAACCTCAGGTTCAACACTGAGGCCCGGCTGCGCACGCAGGAGATGGCCACCCTGTGGGAG AGTGTGCTCCGGCTGTGGAGTGAGGAGGGCCCGCGGACGCCGCTGGGCAGCTGGAAGGCGCTCCCATCCCTGGTGAGGCCGCGGGTCTTC ATCAAGGACATGGCGCCTGGCAAGGTGGTGCCCATGAACTGCTGGGGCGTGTACCAGGCTGTGAGGTGGCTGCGCTGGAAGGCGTCCCTC ATAAAGCTCAGGGCCCTGCGGAGGCCAGGAGGGGTCCTGGAGAAGCCCCACAGCCAGGAGCAGGTGCAGCAGCTCACACCCTCACTGTTT |
| * Fusion transcript sequences (Full-length transcript). |
| >In-frame_LMF1_ENST00000262301_chr16_960931_-_CCDC154_ENST00000409671_chr16_1489127_-_2034nt GAGTGCGCCCTCCCCGCACATGCGCCCTGACAGCCCAACAATGGCGGCGCCCGCGGAGTCGCTGAGGAGGCGGAAGACTGGGTACTCGGA TCCGGAGCCTGAGTCGCCGCCCGCGCCGGGGCGTGGCCCCGCAGGCTCTCCGGCCCATCTCCACACGGGCACCTTCTGGCTGACCCGGAT CGTGCTCCTGAAGGCCCTAGCCTTCGTGTACTTCGTGGCATTCCTGGTGGCTTTCCATCAGAACAAGCAGCTCATCGGTGACAGGGGGCT GCTTCCCTGCAGAGTGTTCCTGAAGAACTTCCAGCAGTACTTCCAGGACAGGACGAGCTGGGAAGTCTTCAGCTACATGCCCACCATCCT CTGGCTGATGGACTGGTCAGACATGAACTCCAACCTGGACTTGCTGGCTCTTCTCGGACTGGGCATCTCGTCTTTCGTACTGATCACGGG CTGCGCCAACATGCTTCTCATGGCTGCCCTGTGGGGCCTCTACATGTCCCTGGTTAATGTGGGCCATGTCTGGTACTCTTTCGGATGGGA GTCCCAGCTTCTGGAGACGGGGTTCCTGGGGATCTTCCTGTGCCCTCTGTGGACGCTGTCAAGGCTGCCCCAGCATACCCCCACATCCCG GATTGTCCTGTGGGGCTTCCGGTGGCTGATCTTCAGGATCATGCTTGGAGCAGCCCAGGTGACCAAGCTCGGCGAAGAGGTGAGCCTGCG CTTCCTGAAGAGGGAGGCCAAGCTGTGCGGCTTCCTGCAGAAGAGCTTCCTGGCCCTGGAGAAGAGAATGAAGGCCTCGGAGAGCTCACG GCTGAAGCTGGAGGGCAGCCTGCGGGGCGAGCTGGAGAGCCGGTGGGAGAAGCTTCGGGGGCTGATGGAGGAGCGCCTGCGGGCCCTGCA GGGGCAGCATGAGGAGAGCCACCTCCTGGAGCAGTGCCAGGGCCTGGATGCTGCCGTGGCCCAGCTGACCAAGTTTGTGCAGCAGAACCA GGCGTCGCTGAACCGTGTCCTACTGGCCGAGGAGAAAGCCTGGGACGCCAAGGGGCGCTTGGAGGAAAGCCGGGCTGGGGAGCTGGCCGC CTATGTGCAGGAGAACCTGGAGGCCGCACAGCTGGCTGGCGAGCTGGCCCGGCAGGAGATGCATGGAGAGCTGGTGCTGCTCCGAGAGAA GAGCCGGGCTCTGGAGGCATCCGTGGCGCAGCTGGCCGGGCAGTTAAAGGAGCTGAGTGGCCATCTCCCGGCTCTGAGCAGCCGGCTCGA TCTGCAGGAGCAGATGCTGGGCCTCAGGCTGTCCGAGGCAAAGACCGAATGGGAAGGTGCAGAGAGGAAGTCCCTGGAGGACCTGGCCAG GTGGCGGAAGGAGGTGACCGAACACCTGCGAGGGGTGCGGGAGAAGGTGGATGGCCTCCCCCAGCAGATAGAGAGTGTCTCCGACAAGTG CCTGCTTCATAAGAGCGACTCAGACCTCAGGATTTCCGCCGAAGGCAAGGCCAGGGAGTTCAAGGTTGGGGCCCTGCGGCAGGAGCTGGC CACGCTACTATCATCCGTGCAGCTGCTAAAGGAAGACAACCCTGGGCGGAAGATCGCGGAGATGCAGGGCAAGCTGGCCACGTTTCAGAA CCAAATAATGAAGCTGGAAAACTGCGTCCAGGCCAACAAGACCATCCAGAACCTCAGGTTCAACACTGAGGCCCGGCTGCGCACGCAGGA GATGGCCACCCTGTGGGAGAGTGTGCTCCGGCTGTGGAGTGAGGAGGGCCCGCGGACGCCGCTGGGCAGCTGGAAGGCGCTCCCATCCCT GGTGAGGCCGCGGGTCTTCATCAAGGACATGGCGCCTGGCAAGGTGGTGCCCATGAACTGCTGGGGCGTGTACCAGGCTGTGAGGTGGCT GCGCTGGAAGGCGTCCCTCATAAAGCTCAGGGCCCTGCGGAGGCCAGGAGGGGTCCTGGAGAAGCCCCACAGCCAGGAGCAGGTGCAGCA >In-frame_LMF1_ENST00000262301_chr16_960931_-_CCDC154_ENST00000389176_chr16_1489127_-_2052nt GAGTGCGCCCTCCCCGCACATGCGCCCTGACAGCCCAACAATGGCGGCGCCCGCGGAGTCGCTGAGGAGGCGGAAGACTGGGTACTCGGA TCCGGAGCCTGAGTCGCCGCCCGCGCCGGGGCGTGGCCCCGCAGGCTCTCCGGCCCATCTCCACACGGGCACCTTCTGGCTGACCCGGAT CGTGCTCCTGAAGGCCCTAGCCTTCGTGTACTTCGTGGCATTCCTGGTGGCTTTCCATCAGAACAAGCAGCTCATCGGTGACAGGGGGCT GCTTCCCTGCAGAGTGTTCCTGAAGAACTTCCAGCAGTACTTCCAGGACAGGACGAGCTGGGAAGTCTTCAGCTACATGCCCACCATCCT CTGGCTGATGGACTGGTCAGACATGAACTCCAACCTGGACTTGCTGGCTCTTCTCGGACTGGGCATCTCGTCTTTCGTACTGATCACGGG CTGCGCCAACATGCTTCTCATGGCTGCCCTGTGGGGCCTCTACATGTCCCTGGTTAATGTGGGCCATGTCTGGTACTCTTTCGGATGGGA GTCCCAGCTTCTGGAGACGGGGTTCCTGGGGATCTTCCTGTGCCCTCTGTGGACGCTGTCAAGGCTGCCCCAGCATACCCCCACATCCCG GATTGTCCTGTGGGGCTTCCGGTGGCTGATCTTCAGGATCATGCTTGGAGCAGCCCAGGTGACCAAGCTCGGCGAAGAGGTGAGCCTGCG CTTCCTGAAGAGGGAGGCCAAGCTGTGCGGCTTCCTGCAGAAGAGCTTCCTGGCCCTGGAGAAGAGAATGAAGGCCTCGGAGAGCTCACG GCTGAAGCTGGAGGGCAGCCTGCGGGGCGAGCTGGAGAGCCGGTGGGAGAAGCTTCGGGGGCTGATGGAGGAGCGCCTGCGGGCCCTGCA GGGGCAGCATGAGGTGGGGCCGGGCGGGCGGCGGGCAGAGGAGAGCCACCTCCTGGAGCAGTGCCAGGGCCTGGATGCTGCCGTGGCCCA GCTGACCAAGTTTGTGCAGCAGAACCAGGCGTCGCTGAACCGTGTCCTACTGGCCGAGGAGAAAGCCTGGGACGCCAAGGGGCGCTTGGA GGAAAGCCGGGCTGGGGAGCTGGCCGCCTATGTGCAGGAGAACCTGGAGGCCGCACAGCTGGCTGGCGAGCTGGCCCGGCAGGAGATGCA TGGAGAGCTGGTGCTGCTCCGAGAGAAGAGCCGGGCTCTGGAGGCATCCGTGGCGCAGCTGGCCGGGCAGTTAAAGGAGCTGAGTGGCCA TCTCCCGGCTCTGAGCAGCCGGCTCGATCTGCAGGAGCAGATGCTGGGCCTCAGGCTGTCCGAGGCAAAGACCGAATGGGAAGGTGCAGA GAGGAAGTCCCTGGAGGACCTGGCCAGGTGGCGGAAGGAGGTGACCGAACACCTGCGAGGGGTGCGGGAGAAGGTGGATGGCCTCCCCCA GCAGATAGAGAGTGTCTCCGACAAGTGCCTGCTTCATAAGAGCGACTCAGACCTCAGGATTTCCGCCGAAGGCAAGGCCAGGGAGTTCAA GGTTGGGGCCCTGCGGCAGGAGCTGGCCACGCTACTATCATCCGTGCAGCTGCTAAAGGAAGACAACCCTGGGCGGAAGATCGCGGAGAT GCAGGGCAAGCTGGCCACGAACCAAATAATGAAGCTGGAAAACTGCGTCCAGGCCAACAAGACCATCCAGAACCTCAGGTTCAACACTGA GGCCCGGCTGCGCACGCAGGAGATGGCCACCCTGTGGGAGAGTGTGCTCCGGCTGTGGAGTGAGGAGGGCCCGCGGACGCCGCTGGGCAG CTGGAAGGCGCTCCCATCCCTGGTGAGGCCGCGGGTCTTCATCAAGGACATGGCGCCTGGCAAGGTGGTGCCCATGAACTGCTGGGGCGT GTACCAGGCTGTGAGGTGGCTGCGCTGGAAGGCGTCCCTCATAAAGCTCAGGGCCCTGCGGAGGCCAGGAGGGGTCCTGGAGAAGCCCCA >In-frame_LMF1_ENST00000399843_chr16_960931_-_CCDC154_ENST00000409671_chr16_1489127_-_2017nt ACATGCGCCCTGACAGCCCAACAATGGCGGCGCCCGCGGAGTCGCTGAGGAGGCGGAAGACTGGGTACTCGGATCCGGAGCCTGAGTCGC CGCCCGCGCCGGGGCGTGGCCCCGCAGGCTCTCCGGCCCATCTCCACACGGGCACCTTCTGGCTGACCCGGATCGTGCTCCTGAAGGCCC TAGCCTTCGTGTACTTCGTGGCATTCCTGGTGGCTTTCCATCAGAACAAGCAGCTCATCGGTGACAGGGGGCTGCTTCCCTGCAGAGTGT TCCTGAAGAACTTCCAGCAGTACTTCCAGGACAGGACGAGCTGGGAAGTCTTCAGCTACATGCCCACCATCCTCTGGCTGATGGACTGGT CAGACATGAACTCCAACCTGGACTTGCTGGCTCTTCTCGGACTGGGCATCTCGTCTTTCGTACTGATCACGGGCTGCGCCAACATGCTTC TCATGGCTGCCCTGTGGGGCCTCTACATGTCCCTGGTTAATGTGGGCCATGTCTGGTATTCCTTCAGATGGGAGTCCCAGCTTCTGGAGA CGGGGTTCCTGGGGATCTTCCTGTGCCCTCTGTGGACGCTGTCAAGGCTGCCCCAGCATACCCCCACATCCCGGATTGTCCTGTGGGGCT TCCGGTGGCTGATCTTCAGGATCATGCTTGGAGCAGCCCAGGTGACCAAGCTCGGCGAAGAGGTGAGCCTGCGCTTCCTGAAGAGGGAGG CCAAGCTGTGCGGCTTCCTGCAGAAGAGCTTCCTGGCCCTGGAGAAGAGAATGAAGGCCTCGGAGAGCTCACGGCTGAAGCTGGAGGGCA GCCTGCGGGGCGAGCTGGAGAGCCGGTGGGAGAAGCTTCGGGGGCTGATGGAGGAGCGCCTGCGGGCCCTGCAGGGGCAGCATGAGGAGA GCCACCTCCTGGAGCAGTGCCAGGGCCTGGATGCTGCCGTGGCCCAGCTGACCAAGTTTGTGCAGCAGAACCAGGCGTCGCTGAACCGTG TCCTACTGGCCGAGGAGAAAGCCTGGGACGCCAAGGGGCGCTTGGAGGAAAGCCGGGCTGGGGAGCTGGCCGCCTATGTGCAGGAGAACC TGGAGGCCGCACAGCTGGCTGGCGAGCTGGCCCGGCAGGAGATGCATGGAGAGCTGGTGCTGCTCCGAGAGAAGAGCCGGGCTCTGGAGG CATCCGTGGCGCAGCTGGCCGGGCAGTTAAAGGAGCTGAGTGGCCATCTCCCGGCTCTGAGCAGCCGGCTCGATCTGCAGGAGCAGATGC TGGGCCTCAGGCTGTCCGAGGCAAAGACCGAATGGGAAGGTGCAGAGAGGAAGTCCCTGGAGGACCTGGCCAGGTGGCGGAAGGAGGTGA CCGAACACCTGCGAGGGGTGCGGGAGAAGGTGGATGGCCTCCCCCAGCAGATAGAGAGTGTCTCCGACAAGTGCCTGCTTCATAAGAGCG ACTCAGACCTCAGGATTTCCGCCGAAGGCAAGGCCAGGGAGTTCAAGGTTGGGGCCCTGCGGCAGGAGCTGGCCACGCTACTATCATCCG TGCAGCTGCTAAAGGAAGACAACCCTGGGCGGAAGATCGCGGAGATGCAGGGCAAGCTGGCCACGTTTCAGAACCAAATAATGAAGCTGG AAAACTGCGTCCAGGCCAACAAGACCATCCAGAACCTCAGGTTCAACACTGAGGCCCGGCTGCGCACGCAGGAGATGGCCACCCTGTGGG AGAGTGTGCTCCGGCTGTGGAGTGAGGAGGGCCCGCGGACGCCGCTGGGCAGCTGGAAGGCGCTCCCATCCCTGGTGAGGCCGCGGGTCT TCATCAAGGACATGGCGCCTGGCAAGGTGGTGCCCATGAACTGCTGGGGCGTGTACCAGGCTGTGAGGTGGCTGCGCTGGAAGGCGTCCC TCATAAAGCTCAGGGCCCTGCGGAGGCCAGGAGGGGTCCTGGAGAAGCCCCACAGCCAGGAGCAGGTGCAGCAGCTCACACCCTCACTGT >In-frame_LMF1_ENST00000399843_chr16_960931_-_CCDC154_ENST00000389176_chr16_1489127_-_2035nt ACATGCGCCCTGACAGCCCAACAATGGCGGCGCCCGCGGAGTCGCTGAGGAGGCGGAAGACTGGGTACTCGGATCCGGAGCCTGAGTCGC CGCCCGCGCCGGGGCGTGGCCCCGCAGGCTCTCCGGCCCATCTCCACACGGGCACCTTCTGGCTGACCCGGATCGTGCTCCTGAAGGCCC TAGCCTTCGTGTACTTCGTGGCATTCCTGGTGGCTTTCCATCAGAACAAGCAGCTCATCGGTGACAGGGGGCTGCTTCCCTGCAGAGTGT TCCTGAAGAACTTCCAGCAGTACTTCCAGGACAGGACGAGCTGGGAAGTCTTCAGCTACATGCCCACCATCCTCTGGCTGATGGACTGGT CAGACATGAACTCCAACCTGGACTTGCTGGCTCTTCTCGGACTGGGCATCTCGTCTTTCGTACTGATCACGGGCTGCGCCAACATGCTTC TCATGGCTGCCCTGTGGGGCCTCTACATGTCCCTGGTTAATGTGGGCCATGTCTGGTATTCCTTCAGATGGGAGTCCCAGCTTCTGGAGA CGGGGTTCCTGGGGATCTTCCTGTGCCCTCTGTGGACGCTGTCAAGGCTGCCCCAGCATACCCCCACATCCCGGATTGTCCTGTGGGGCT TCCGGTGGCTGATCTTCAGGATCATGCTTGGAGCAGCCCAGGTGACCAAGCTCGGCGAAGAGGTGAGCCTGCGCTTCCTGAAGAGGGAGG CCAAGCTGTGCGGCTTCCTGCAGAAGAGCTTCCTGGCCCTGGAGAAGAGAATGAAGGCCTCGGAGAGCTCACGGCTGAAGCTGGAGGGCA GCCTGCGGGGCGAGCTGGAGAGCCGGTGGGAGAAGCTTCGGGGGCTGATGGAGGAGCGCCTGCGGGCCCTGCAGGGGCAGCATGAGGTGG GGCCGGGCGGGCGGCGGGCAGAGGAGAGCCACCTCCTGGAGCAGTGCCAGGGCCTGGATGCTGCCGTGGCCCAGCTGACCAAGTTTGTGC AGCAGAACCAGGCGTCGCTGAACCGTGTCCTACTGGCCGAGGAGAAAGCCTGGGACGCCAAGGGGCGCTTGGAGGAAAGCCGGGCTGGGG AGCTGGCCGCCTATGTGCAGGAGAACCTGGAGGCCGCACAGCTGGCTGGCGAGCTGGCCCGGCAGGAGATGCATGGAGAGCTGGTGCTGC TCCGAGAGAAGAGCCGGGCTCTGGAGGCATCCGTGGCGCAGCTGGCCGGGCAGTTAAAGGAGCTGAGTGGCCATCTCCCGGCTCTGAGCA GCCGGCTCGATCTGCAGGAGCAGATGCTGGGCCTCAGGCTGTCCGAGGCAAAGACCGAATGGGAAGGTGCAGAGAGGAAGTCCCTGGAGG ACCTGGCCAGGTGGCGGAAGGAGGTGACCGAACACCTGCGAGGGGTGCGGGAGAAGGTGGATGGCCTCCCCCAGCAGATAGAGAGTGTCT CCGACAAGTGCCTGCTTCATAAGAGCGACTCAGACCTCAGGATTTCCGCCGAAGGCAAGGCCAGGGAGTTCAAGGTTGGGGCCCTGCGGC AGGAGCTGGCCACGCTACTATCATCCGTGCAGCTGCTAAAGGAAGACAACCCTGGGCGGAAGATCGCGGAGATGCAGGGCAAGCTGGCCA CGAACCAAATAATGAAGCTGGAAAACTGCGTCCAGGCCAACAAGACCATCCAGAACCTCAGGTTCAACACTGAGGCCCGGCTGCGCACGC AGGAGATGGCCACCCTGTGGGAGAGTGTGCTCCGGCTGTGGAGTGAGGAGGGCCCGCGGACGCCGCTGGGCAGCTGGAAGGCGCTCCCAT CCCTGGTGAGGCCGCGGGTCTTCATCAAGGACATGGCGCCTGGCAAGGTGGTGCCCATGAACTGCTGGGGCGTGTACCAGGCTGTGAGGT GGCTGCGCTGGAAGGCGTCCCTCATAAAGCTCAGGGCCCTGCGGAGGCCAGGAGGGGTCCTGGAGAAGCCCCACAGCCAGGAGCAGGTGC >In-frame_LMF1_ENST00000568897_chr16_960931_-_CCDC154_ENST00000409671_chr16_1489127_-_1894nt GGCTCTCCGGCCCATCTCCACACGGGCACCTTCTGGCTGACCCGGATCGTGCTCCTGAAGGCCCTAGCCTTCGTGTACTTCGTGGCATTC CTGGTGGCTTTCCATCAGAACAAGCAGCTCATCGGTGACAGGGGGCTGCTTCCCTGCAGAGTGTTCCTGAAGAACTTCCAGCAGTACTTC CAGGACAGGACGAGCTGGGAAGTCTTCAGCTACATGCCCACCATCCTCTGGCTGATGGACTGGTCAGACATGAACTCCAACCTGGACTTG CTGGCTCTTCTCGGACTGGGCATCTCGTCTTTCGTACTGATCACGGGCTGCGCCAACATGCTTCTCATGGCTGCCCTGTGGGGCCTCTAC ATGTCCCTGGTTAATGTGGGCCATGTCTGGTGAGATGGGAGTCCCAGCTTCTGGAGACGGGGTTCCTGGGGATCTTCCTGTGCCCTCTGT GGACGCTGTCAAGGCTGCCCCAGCATACCCCCACATCCCGGATTGTCCTGTGGGGCTTCCGGTGGCTGATCTTCAGGATCATGCTTGGAG CAGCCCAGGTGACCAAGCTCGGCGAAGAGGTGAGCCTGCGCTTCCTGAAGAGGGAGGCCAAGCTGTGCGGCTTCCTGCAGAAGAGCTTCC TGGCCCTGGAGAAGAGAATGAAGGCCTCGGAGAGCTCACGGCTGAAGCTGGAGGGCAGCCTGCGGGGCGAGCTGGAGAGCCGGTGGGAGA AGCTTCGGGGGCTGATGGAGGAGCGCCTGCGGGCCCTGCAGGGGCAGCATGAGGAGAGCCACCTCCTGGAGCAGTGCCAGGGCCTGGATG CTGCCGTGGCCCAGCTGACCAAGTTTGTGCAGCAGAACCAGGCGTCGCTGAACCGTGTCCTACTGGCCGAGGAGAAAGCCTGGGACGCCA AGGGGCGCTTGGAGGAAAGCCGGGCTGGGGAGCTGGCCGCCTATGTGCAGGAGAACCTGGAGGCCGCACAGCTGGCTGGCGAGCTGGCCC GGCAGGAGATGCATGGAGAGCTGGTGCTGCTCCGAGAGAAGAGCCGGGCTCTGGAGGCATCCGTGGCGCAGCTGGCCGGGCAGTTAAAGG AGCTGAGTGGCCATCTCCCGGCTCTGAGCAGCCGGCTCGATCTGCAGGAGCAGATGCTGGGCCTCAGGCTGTCCGAGGCAAAGACCGAAT GGGAAGGTGCAGAGAGGAAGTCCCTGGAGGACCTGGCCAGGTGGCGGAAGGAGGTGACCGAACACCTGCGAGGGGTGCGGGAGAAGGTGG ATGGCCTCCCCCAGCAGATAGAGAGTGTCTCCGACAAGTGCCTGCTTCATAAGAGCGACTCAGACCTCAGGATTTCCGCCGAAGGCAAGG CCAGGGAGTTCAAGGTTGGGGCCCTGCGGCAGGAGCTGGCCACGCTACTATCATCCGTGCAGCTGCTAAAGGAAGACAACCCTGGGCGGA AGATCGCGGAGATGCAGGGCAAGCTGGCCACGTTTCAGAACCAAATAATGAAGCTGGAAAACTGCGTCCAGGCCAACAAGACCATCCAGA ACCTCAGGTTCAACACTGAGGCCCGGCTGCGCACGCAGGAGATGGCCACCCTGTGGGAGAGTGTGCTCCGGCTGTGGAGTGAGGAGGGCC CGCGGACGCCGCTGGGCAGCTGGAAGGCGCTCCCATCCCTGGTGAGGCCGCGGGTCTTCATCAAGGACATGGCGCCTGGCAAGGTGGTGC CCATGAACTGCTGGGGCGTGTACCAGGCTGTGAGGTGGCTGCGCTGGAAGGCGTCCCTCATAAAGCTCAGGGCCCTGCGGAGGCCAGGAG GGGTCCTGGAGAAGCCCCACAGCCAGGAGCAGGTGCAGCAGCTCACACCCTCACTGTTTATCCAGAAATAAACGTGCTGGCTTTGTACTC >In-frame_LMF1_ENST00000568897_chr16_960931_-_CCDC154_ENST00000389176_chr16_1489127_-_1912nt GGCTCTCCGGCCCATCTCCACACGGGCACCTTCTGGCTGACCCGGATCGTGCTCCTGAAGGCCCTAGCCTTCGTGTACTTCGTGGCATTC CTGGTGGCTTTCCATCAGAACAAGCAGCTCATCGGTGACAGGGGGCTGCTTCCCTGCAGAGTGTTCCTGAAGAACTTCCAGCAGTACTTC CAGGACAGGACGAGCTGGGAAGTCTTCAGCTACATGCCCACCATCCTCTGGCTGATGGACTGGTCAGACATGAACTCCAACCTGGACTTG CTGGCTCTTCTCGGACTGGGCATCTCGTCTTTCGTACTGATCACGGGCTGCGCCAACATGCTTCTCATGGCTGCCCTGTGGGGCCTCTAC ATGTCCCTGGTTAATGTGGGCCATGTCTGGTGAGATGGGAGTCCCAGCTTCTGGAGACGGGGTTCCTGGGGATCTTCCTGTGCCCTCTGT GGACGCTGTCAAGGCTGCCCCAGCATACCCCCACATCCCGGATTGTCCTGTGGGGCTTCCGGTGGCTGATCTTCAGGATCATGCTTGGAG CAGCCCAGGTGACCAAGCTCGGCGAAGAGGTGAGCCTGCGCTTCCTGAAGAGGGAGGCCAAGCTGTGCGGCTTCCTGCAGAAGAGCTTCC TGGCCCTGGAGAAGAGAATGAAGGCCTCGGAGAGCTCACGGCTGAAGCTGGAGGGCAGCCTGCGGGGCGAGCTGGAGAGCCGGTGGGAGA AGCTTCGGGGGCTGATGGAGGAGCGCCTGCGGGCCCTGCAGGGGCAGCATGAGGTGGGGCCGGGCGGGCGGCGGGCAGAGGAGAGCCACC TCCTGGAGCAGTGCCAGGGCCTGGATGCTGCCGTGGCCCAGCTGACCAAGTTTGTGCAGCAGAACCAGGCGTCGCTGAACCGTGTCCTAC TGGCCGAGGAGAAAGCCTGGGACGCCAAGGGGCGCTTGGAGGAAAGCCGGGCTGGGGAGCTGGCCGCCTATGTGCAGGAGAACCTGGAGG CCGCACAGCTGGCTGGCGAGCTGGCCCGGCAGGAGATGCATGGAGAGCTGGTGCTGCTCCGAGAGAAGAGCCGGGCTCTGGAGGCATCCG TGGCGCAGCTGGCCGGGCAGTTAAAGGAGCTGAGTGGCCATCTCCCGGCTCTGAGCAGCCGGCTCGATCTGCAGGAGCAGATGCTGGGCC TCAGGCTGTCCGAGGCAAAGACCGAATGGGAAGGTGCAGAGAGGAAGTCCCTGGAGGACCTGGCCAGGTGGCGGAAGGAGGTGACCGAAC ACCTGCGAGGGGTGCGGGAGAAGGTGGATGGCCTCCCCCAGCAGATAGAGAGTGTCTCCGACAAGTGCCTGCTTCATAAGAGCGACTCAG ACCTCAGGATTTCCGCCGAAGGCAAGGCCAGGGAGTTCAAGGTTGGGGCCCTGCGGCAGGAGCTGGCCACGCTACTATCATCCGTGCAGC TGCTAAAGGAAGACAACCCTGGGCGGAAGATCGCGGAGATGCAGGGCAAGCTGGCCACGAACCAAATAATGAAGCTGGAAAACTGCGTCC AGGCCAACAAGACCATCCAGAACCTCAGGTTCAACACTGAGGCCCGGCTGCGCACGCAGGAGATGGCCACCCTGTGGGAGAGTGTGCTCC GGCTGTGGAGTGAGGAGGGCCCGCGGACGCCGCTGGGCAGCTGGAAGGCGCTCCCATCCCTGGTGAGGCCGCGGGTCTTCATCAAGGACA TGGCGCCTGGCAAGGTGGTGCCCATGAACTGCTGGGGCGTGTACCAGGCTGTGAGGTGGCTGCGCTGGAAGGCGTCCCTCATAAAGCTCA GGGCCCTGCGGAGGCCAGGAGGGGTCCTGGAGAAGCCCCACAGCCAGGAGCAGGTGCAGCAGCTCACACCCTCACTGTTTATCCAGAAAT |
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FusionGenePPI for LMF1_CCDC154 |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
| Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
| Hgene | Hgene's interactors | Tgene | Tgene's interactors |
| LMF1 | LIPC, LPL, PNLIP, NXPH3, SPINT2, KLK8, TAZ, TMEM30A, FUT9, OGFOD3, ATP1B4, SERPINB11, B4GALT3, ENPP6, ITGB8, WNT4, HTR3C, LYPD6 | CCDC154 | AP3B1, EAF1, NOLC1 |
| - Retained PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| - Lost PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
| - Retained PPIs, but lost function due to frame-shift fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for LMF1_CCDC154 |
| Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
| Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for LMF1_CCDC154 |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
| Hgene | LMF1 | C0020557 | Hypertriglyceridemia | 1 | CTD_human |
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