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Fusion gene ID: 19619 |
FusionGeneSummary for LENG8_SIPA1L3 |
Fusion gene summary |
Fusion gene information | Fusion gene name: LENG8_SIPA1L3 | Fusion gene ID: 19619 | Hgene | Tgene | Gene symbol | LENG8 | SIPA1L3 | Gene ID | 114823 | 23094 |
Gene name | leukocyte receptor cluster member 8 | signal induced proliferation associated 1 like 3 | |
Synonyms | pp13842 | CTRCT45|SPAL3|SPAR3 | |
Cytomap | 19q13.42 | 19q13.13-q13.2 | |
Type of gene | protein-coding | protein-coding | |
Description | leukocyte receptor cluster member 8leukocyte receptor cluster (LRC) member 8 | signal-induced proliferation-associated 1-like protein 3SIPA1-like protein 3SPA-1-like protein 3 | |
Modification date | 20180519 | 20180519 | |
UniProtAcc | Q96PV6 | O60292 | |
Ensembl transtripts involved in fusion gene | ENST00000326764, ENST00000376514, | ENST00000222345, ENST00000476317, | |
Fusion gene scores | * DoF score | 7 X 8 X 3=168 | 15 X 10 X 9=1350 |
# samples | 9 | 14 | |
** MAII score | log2(9/168*10)=-0.900464326449086 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(14/1350*10)=-3.26946067499323 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: LENG8 [Title/Abstract] AND SIPA1L3 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Tgene | SIPA1L3 | GO:0003382 | epithelial cell morphogenesis | 26231217 |
Tgene | SIPA1L3 | GO:0090162 | establishment of epithelial cell polarity | 26231217 |
Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | RV | BRCA | TCGA-UL-AAZ6-01A | LENG8 | chr19 | 54969700 | + | SIPA1L3 | chr19 | 38631824 | + |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000326764 | ENST00000222345 | LENG8 | chr19 | 54969700 | + | SIPA1L3 | chr19 | 38631824 | + |
5CDS-intron | ENST00000326764 | ENST00000476317 | LENG8 | chr19 | 54969700 | + | SIPA1L3 | chr19 | 38631824 | + |
intron-3CDS | ENST00000376514 | ENST00000222345 | LENG8 | chr19 | 54969700 | + | SIPA1L3 | chr19 | 38631824 | + |
intron-intron | ENST00000376514 | ENST00000476317 | LENG8 | chr19 | 54969700 | + | SIPA1L3 | chr19 | 38631824 | + |
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FusionProtFeatures for LENG8_SIPA1L3 |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
LENG8 | SIPA1L3 |
Plays a critical role in epithelial cell morphogenesis,polarity, adhesion and cytoskeletal organization in the lens(PubMed:26231217). {ECO:0000269|PubMed:26231217}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | LENG8 | chr19:54969700 | chr19:38631824 | ENST00000326764 | + | 15 | 16 | 412_446 | 746 | 801 | Compositional bias | Ser-rich |
Hgene | LENG8 | chr19:54969700 | chr19:38631824 | ENST00000326764 | + | 15 | 16 | 71_168 | 746 | 801 | Compositional bias | Gln-rich |
Tgene | >SIPA1L3 | chr19:54969700 | chr19:38631824 | ENST00000222345 | + | 9 | 22 | 1720_1774 | 1047 | 1782 | Coiled coil | Ontology_term=ECO:0000255 |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | >LENG8 | chr19:54969700 | chr19:38631824 | ENST00000326764 | + | 15 | 16 | 636_800 | 746 | 801 | Domain | PCI |
Tgene | SIPA1L3 | chr19:54969700 | chr19:38631824 | ENST00000222345 | + | 9 | 22 | 611_828 | 1047 | 1782 | Domain | Rap-GAP |
Tgene | SIPA1L3 | chr19:54969700 | chr19:38631824 | ENST00000222345 | + | 9 | 22 | 966_1042 | 1047 | 1782 | Domain | PDZ |
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FusionGeneSequence for LENG8_SIPA1L3 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_LENG8_ENST00000326764_chr19_54969700_+_SIPA1L3_ENST00000222345_chr19_38631824_+_1481aa MAANVGDQRSTDWSSQYSMVAGAGRENGMETPMHENPEWEKARQALASISKSGAAGGSAKSSSNGPVASAQYVSQAEASALQQQQYYQWY QQYNYAYPYSYYYPMSMYQSYGSPSQYGMAGSYGSATPQQPSAPQHQGTLNQPPVPGMDESMSYQAPPQQLPSAQPPQPSNPPHGAHTLN SGPQPGTAPATQHSQAGPATGQAYGPHTYTEPAKPKKGQQLWNRMKPAPGTGGLKFNIQKRPFAVTTQSFGSNAEGQHSGFGPQPNPEKV QNHSGSSARGNLSGKPDDWPQDMKEYVERCFTACESEEDKDRTEKLLKEVLQARLQDGSAYTIDWSREPLPGLTREPVAESPKKKRWEAA SSLHPPRGAGSATRGGGAPSQRGTPGAGGAGRARGNSFTKFGNRNVFMKDNSSSSSTDSRSRSSSRSPTRHFRRSDSHSDSDSSYSGNEC HPVGRRNPPPKGRGGRGAHMDRGRGRAQRGKRHDLAPTKRSRKKMAALECEDPERELKKQKRAARFQHGHSRRLRLEPLVLQMSSLESSG ADPDWQELQIVGTCPDITKHYLRLTCAPDPSTVRPVAVLKKSLCMVKCHWKEKQDYAFACEQMKSIRQDLTVQGIRTEFTVEVYETHARI ALEKGDHEEFNQCQTQLKSLYAENLPGNVGEFTAYRILYYIFTKNSGDITTELAYLTRELKADPCVAHALALRTAWALGNYHRFFRLYCH APCMSGYLVDKFADRERKVALKAMIKTGWPETYDMNTSEPKTEQESITPGGRPPYRSNAPWQWSGPASHNSLPASKWATPTTPGHAQSLS RPLKQTPIVPFRESQPLHSKRPVSFPETPYTVSPAGADRVPPYRQPSGSFSTPGSATYVRYKPSPERYTAAPHPLLSLDPHFSHDGTSSG DSSSGGLTSQESTMERQKPEPLWHVPAQARLSAIAGSSGNKHPSRQDAAGKDSPNRHSKGEPQYSSHSSSNTLSSNASSSHSDDRWFDPL DPLEPEQDPLSKGGSSDSGIDTTLYTSSPSCMSLAKAPRPAKPHKPPGSMGLCGGGREAAGRSHHADRRREVSPAPAVAGQSKGYRPKLY SSGSSTPTGLAGGSRDPPRQPSDMGSRVGYPAQVYKTASAETPRPSQLAQPSPFQLSASVPKSFFSKQPVRNKHPTGWKRTEEPPPRPLP FSDPKKQVDTNTKNVFGQPRLRASLRDLRSPRKNYKSTIEDDLKKLIIMDNLGPEQERDTGQSPQKGLQRTLSDESLCSGRREPSFASPA GLEPGLPSDVLFTSTCAFPSSTLPARRQHQHPHPPVGPGATPAAGSGFPEKKSTISASELSLADGRDRPLRRLDPGLMPLPDTAAGLEWS SLVNAAKAYEVQRAVSLFSLNDPALSPDIPPAHSPVHSHLSLERGPPTPRTTPTMSEEPPLDLTGKVYQLEVMLKQLHTDLQKEKQDKVV |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_LENG8_ENST00000326764_chr19_54969700_+_SIPA1L3_ENST00000222345_chr19_38631824_+_4443nt ATGGCGGCCAACGTGGGTGATCAACGTAGCACAGATTGGTCTTCTCAGTACAGCATGGTGGCTGGGGCAGGCCGAGAGAATGGCATGGAG ACGCCGATGCACGAGAACCCGGAGTGGGAGAAGGCCCGTCAGGCCCTGGCCAGCATCAGCAAGTCAGGAGCTGCCGGCGGCTCTGCCAAG TCCAGCAGCAATGGGCCTGTGGCCAGTGCACAGTACGTGTCCCAGGCAGAAGCCTCAGCTTTGCAGCAGCAGCAGTACTACCAGTGGTAC CAGCAGTACAACTATGCCTACCCCTACAGCTACTACTATCCCATGAGCATGTACCAGAGCTATGGCTCCCCTTCCCAGTATGGGATGGCC GGCTCCTATGGCTCAGCCACACCCCAGCAGCCATCCGCACCCCAACACCAAGGGACTCTGAACCAGCCCCCAGTCCCCGGCATGGATGAG AGCATGTCCTACCAGGCTCCCCCTCAGCAGCTGCCGTCGGCTCAGCCCCCTCAGCCCTCAAATCCCCCACATGGGGCTCACACGCTGAAC AGTGGCCCTCAGCCTGGGACAGCTCCAGCCACACAGCACAGCCAGGCGGGGCCCGCCACGGGCCAGGCCTATGGGCCACACACCTACACC GAACCTGCCAAGCCCAAGAAGGGCCAACAGCTGTGGAACCGCATGAAGCCCGCCCCTGGGACTGGAGGTCTCAAGTTCAACATCCAGAAG CGACCCTTTGCTGTTACCACCCAGAGCTTTGGCTCCAACGCAGAGGGCCAGCACAGTGGTTTTGGCCCCCAGCCCAACCCTGAGAAAGTT CAGAACCACAGCGGGTCCTCTGCCCGGGGGAACCTGTCTGGGAAGCCCGATGACTGGCCCCAGGACATGAAAGAGTATGTGGAGCGCTGC TTCACCGCCTGTGAGTCGGAGGAGGACAAGGACCGCACGGAAAAGCTGCTCAAGGAGGTGCTGCAGGCGCGGCTGCAGGACGGCTCGGCC TATACCATTGACTGGAGCCGGGAGCCCTTGCCGGGGCTGACCCGGGAGCCTGTGGCTGAGAGCCCTAAGAAGAAGCGGTGGGAGGCCGCT AGCAGCCTTCACCCTCCTAGAGGGGCAGGCTCGGCGACAAGGGGCGGGGGTGCCCCGTCCCAGCGAGGGACGCCCGGGGCTGGGGGTGCC GGTCGAGCCCGGGGCAACAGCTTCACCAAGTTTGGCAACCGCAACGTCTTCATGAAGGACAACAGCTCTTCTTCCAGCACAGACTCCCGC TCCCGCTCCTCCTCCAGGTCCCCGACGCGCCACTTCCGCAGAAGTGACTCCCACTCAGACTCCGACAGCTCCTACTCAGGGAATGAGTGT CACCCTGTGGGCCGCAGGAACCCGCCCCCTAAGGGCCGGGGCGGTCGAGGGGCCCATATGGATCGGGGCCGAGGCAGGGCGCAGCGTGGG AAGAGGCACGATCTGGCGCCCACCAAGCGCAGTCGAAAGAAGATGGCGGCGCTGGAGTGTGAGGACCCGGAGCGAGAGCTGAAGAAGCAG AAGCGGGCAGCCCGCTTCCAGCACGGACACTCCCGCCGCCTGCGCCTCGAGCCCCTGGTGCTGCAGATGAGCAGCCTGGAGAGCAGTGGG GCTGACCCTGACTGGCAGGAGCTGCAGATCGTGGGCACCTGCCCTGACATCACCAAGCACTACCTGCGCCTCACCTGTGCCCCCGACCCG TCCACCGTGCGCCCTGTGGCAGTTTTGAAAAAGTCGCTGTGCATGGTCAAGTGCCACTGGAAAGAGAAGCAGGACTACGCGTTTGCCTGC GAGCAGATGAAGTCGATCCGGCAGGATCTGACGGTGCAGGGCATCCGCACCGAGTTCACGGTGGAGGTGTACGAGACCCATGCCCGGATC GCCTTGGAGAAGGGTGACCATGAAGAGTTTAACCAGTGCCAGACGCAGCTCAAGTCGCTGTACGCCGAGAACTTGCCTGGCAATGTGGGC GAGTTTACTGCCTACCGAATCCTCTACTACATCTTCACCAAGAACTCGGGAGACATCACCACGGAGCTGGCATACCTCACACGAGAACTG AAGGCAGATCCTTGCGTGGCCCACGCCTTGGCATTAAGGACAGCCTGGGCCCTGGGCAACTACCACCGCTTTTTCCGGCTCTACTGCCAT GCACCCTGCATGTCTGGCTACCTCGTGGACAAGTTTGCAGATCGGGAGCGCAAGGTCGCCCTCAAGGCCATGATCAAAACGGGTTGGCCG GAGACCTACGACATGAATACCTCGGAGCCCAAGACGGAGCAGGAAAGCATCACTCCTGGGGGCCGGCCCCCCTACCGCAGCAATGCTCCC TGGCAGTGGAGCGGGCCCGCATCCCATAACTCTCTACCAGCCTCCAAGTGGGCCACTCCAACCACTCCCGGCCATGCCCAGTCCCTGAGC CGGCCCCTGAAGCAGACCCCCATAGTCCCCTTCCGGGAGTCCCAGCCACTGCACAGCAAGAGGCCTGTCAGCTTCCCAGAAACCCCTTAC ACAGTATCACCAGCAGGGGCCGACAGAGTCCCTCCCTACCGACAGCCTTCTGGGAGCTTCTCCACCCCCGGTTCGGCCACCTACGTGAGA TACAAGCCATCCCCAGAAAGGTACACGGCTGCCCCACACCCCCTGCTATCTCTTGATCCCCACTTCAGCCACGATGGGACGTCCAGCGGC GACTCCTCTTCCGGCGGCCTGACCAGCCAGGAGAGCACCATGGAACGCCAGAAGCCAGAGCCTTTGTGGCATGTGCCTGCCCAGGCCAGG CTCTCAGCCATAGCCGGAAGCAGCGGGAACAAGCACCCGTCCAGGCAGGATGCAGCAGGCAAAGATTCCCCCAACAGGCATTCCAAAGGA GAACCTCAATACTCAAGTCATTCCAGCAGCAACACCCTCTCCAGCAACGCATCCAGCAGCCACAGCGACGACCGCTGGTTCGACCCCCTG GACCCCCTGGAGCCAGAGCAAGACCCCCTCTCCAAGGGTGGCTCTAGTGACAGCGGCATCGACACCACCCTCTACACCTCCAGCCCTAGC TGCATGTCCCTGGCCAAGGCTCCACGGCCCGCCAAGCCACACAAGCCCCCTGGAAGTATGGGCCTTTGTGGCGGGGGTCGCGAGGCCGCT GGGAGGTCCCACCACGCAGACAGGCGGCGGGAGGTCTCCCCTGCCCCCGCAGTTGCCGGCCAAAGCAAGGGCTACCGACCGAAGCTGTAC TCCTCCGGCTCCAGCACCCCCACGGGACTGGCGGGGGGCAGCCGAGACCCACCGAGGCAGCCCAGTGACATGGGCTCGAGGGTTGGCTAC CCCGCTCAGGTTTACAAAACTGCCAGTGCAGAGACTCCTCGGCCCTCCCAGCTGGCCCAGCCCAGCCCCTTTCAGCTCTCCGCCTCCGTC CCCAAGTCCTTCTTCTCCAAGCAGCCTGTACGCAATAAGCACCCAACAGGGTGGAAGAGAACGGAGGAGCCCCCACCACGGCCACTCCCC TTCAGTGACCCAAAGAAGCAGGTGGACACGAACACCAAAAATGTCTTTGGGCAACCGAGGTTGAGGGCATCCCTCCGAGACCTCCGGTCA CCACGGAAGAACTACAAATCCACCATCGAGGATGACCTGAAGAAACTCATCATCATGGACAACCTGGGGCCAGAGCAGGAGAGAGACACG GGACAGTCACCGCAGAAGGGCCTGCAGCGGACGCTGTCGGACGAGAGCCTGTGCAGCGGGCGCCGGGAGCCCAGCTTCGCCAGCCCCGCT GGCCTAGAGCCAGGGCTGCCCAGCGACGTGCTCTTCACCAGCACCTGCGCCTTCCCGTCCAGCACGCTGCCTGCACGCCGCCAGCACCAG CACCCCCACCCGCCCGTCGGCCCCGGTGCCACCCCTGCCGCCGGCAGCGGCTTTCCCGAGAAGAAATCCACCATCTCAGCCTCGGAGCTC TCGCTGGCTGATGGGCGGGACCGCCCCCTGCGGCGCCTGGACCCTGGGCTGATGCCCCTGCCTGACACAGCTGCTGGCCTCGAGTGGTCC AGCCTGGTGAACGCAGCCAAGGCATACGAAGTGCAAAGAGCCGTCTCACTCTTCTCTCTGAACGACCCGGCCCTGAGCCCGGACATCCCG CCTGCACACAGTCCTGTCCACAGCCACCTGAGCCTGGAGAGGGGACCCCCGACCCCCAGGACCACCCCTACCATGAGCGAGGAGCCACCC CTGGATCTGACAGGCAAGGTGTACCAGCTGGAGGTGATGCTGAAACAGCTGCACACTGACCTGCAGAAGGAGAAGCAGGACAAGGTGGTG CTCCAGTCAGAGGTGGCCAGCCTGCGGCAGAACAACCAGCGGCTGCAGGAGGAGTCGCAGGCCGCCAGCGAGCAGCTGCGCAAGTTTGCG |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_LENG8_ENST00000326764_chr19_54969700_+_SIPA1L3_ENST00000222345_chr19_38631824_+_7054nt CCACTGTACTCTATCGTGGGCGACGACAGAGCAAGAGCAAGACTCCGTCTCCGAGAACAACAACAACAGCAACAAGAAAACAACAATAAA AAAAATAAGGCTGCGTGGGAGGCAGAAAGAGCTAATGCGGCCACGCTTGTCCCCTCGGGGCCACCGTCCCCACCCAGACTTCCGGTCTGC CTTAAAATGTTCATGCGTAAGTGCGTGGGCAGGAAGGCGGGCTCAAGCGCAGCTCGTGGCGTTCATTGGCTGTGCAGGGCCGAGGGAGGC GGTGCAAGGCCGCCGCGTGACGTCAGGACGCCGCGGTCAGGACGTCGAAGCCAAAGAAGACCAGAGCCAGCCGGGTGGCACAGCGGTGTC GTGGCCGTGTTGCTGATCGCCTGGGTGGTTGTTGGCGTGTCCCTGCAGCGAAGGATCCTGGTTGGCAGTGAAAAAGCAGTCTGGCTCCCG AGGTCCACCCCTTATACCCCAAGGTCCAGATGGCGGCCAACGTGGGTGATCAACGTAGCACAGATTGGTCTTCTCAGTACAGCATGGTGG CTGGGGCAGGCCGAGAGAATGGCATGGAGACGCCGATGCACGAGAACCCGGAGTGGGAGAAGGCCCGTCAGGCCCTGGCCAGCATCAGCA AGTCAGGAGCTGCCGGCGGCTCTGCCAAGTCCAGCAGCAATGGGCCTGTGGCCAGTGCACAGTACGTGTCCCAGGCAGAAGCCTCAGCTT TGCAGCAGCAGCAGTACTACCAGTGGTACCAGCAGTACAACTATGCCTACCCCTACAGCTACTACTATCCCATGAGCATGTACCAGAGCT ATGGCTCCCCTTCCCAGTATGGGATGGCCGGCTCCTATGGCTCAGCCACACCCCAGCAGCCATCCGCACCCCAACACCAAGGGACTCTGA ACCAGCCCCCAGTCCCCGGCATGGATGAGAGCATGTCCTACCAGGCTCCCCCTCAGCAGCTGCCGTCGGCTCAGCCCCCTCAGCCCTCAA ATCCCCCACATGGGGCTCACACGCTGAACAGTGGCCCTCAGCCTGGGACAGCTCCAGCCACACAGCACAGCCAGGCGGGGCCCGCCACGG GCCAGGCCTATGGGCCACACACCTACACCGAACCTGCCAAGCCCAAGAAGGGCCAACAGCTGTGGAACCGCATGAAGCCCGCCCCTGGGA CTGGAGGTCTCAAGTTCAACATCCAGAAGCGACCCTTTGCTGTTACCACCCAGAGCTTTGGCTCCAACGCAGAGGGCCAGCACAGTGGTT TTGGCCCCCAGCCCAACCCTGAGAAAGTTCAGAACCACAGCGGGTCCTCTGCCCGGGGGAACCTGTCTGGGAAGCCCGATGACTGGCCCC AGGACATGAAAGAGTATGTGGAGCGCTGCTTCACCGCCTGTGAGTCGGAGGAGGACAAGGACCGCACGGAAAAGCTGCTCAAGGAGGTGC TGCAGGCGCGGCTGCAGGACGGCTCGGCCTATACCATTGACTGGAGCCGGGAGCCCTTGCCGGGGCTGACCCGGGAGCCTGTGGCTGAGA GCCCTAAGAAGAAGCGGTGGGAGGCCGCTAGCAGCCTTCACCCTCCTAGAGGGGCAGGCTCGGCGACAAGGGGCGGGGGTGCCCCGTCCC AGCGAGGGACGCCCGGGGCTGGGGGTGCCGGTCGAGCCCGGGGCAACAGCTTCACCAAGTTTGGCAACCGCAACGTCTTCATGAAGGACA ACAGCTCTTCTTCCAGCACAGACTCCCGCTCCCGCTCCTCCTCCAGGTCCCCGACGCGCCACTTCCGCAGAAGTGACTCCCACTCAGACT CCGACAGCTCCTACTCAGGGAATGAGTGTCACCCTGTGGGCCGCAGGAACCCGCCCCCTAAGGGCCGGGGCGGTCGAGGGGCCCATATGG ATCGGGGCCGAGGCAGGGCGCAGCGTGGGAAGAGGCACGATCTGGCGCCCACCAAGCGCAGTCGAAAGAAGATGGCGGCGCTGGAGTGTG AGGACCCGGAGCGAGAGCTGAAGAAGCAGAAGCGGGCAGCCCGCTTCCAGCACGGACACTCCCGCCGCCTGCGCCTCGAGCCCCTGGTGC TGCAGATGAGCAGCCTGGAGAGCAGTGGGGCTGACCCTGACTGGCAGGAGCTGCAGATCGTGGGCACCTGCCCTGACATCACCAAGCACT ACCTGCGCCTCACCTGTGCCCCCGACCCGTCCACCGTGCGCCCTGTGGCAGTTTTGAAAAAGTCGCTGTGCATGGTCAAGTGCCACTGGA AAGAGAAGCAGGACTACGCGTTTGCCTGCGAGCAGATGAAGTCGATCCGGCAGGATCTGACGGTGCAGGGCATCCGCACCGAGTTCACGG TGGAGGTGTACGAGACCCATGCCCGGATCGCCTTGGAGAAGGGTGACCATGAAGAGTTTAACCAGTGCCAGACGCAGCTCAAGTCGCTGT ACGCCGAGAACTTGCCTGGCAATGTGGGCGAGTTTACTGCCTACCGAATCCTCTACTACATCTTCACCAAGAACTCGGGAGACATCACCA CGGAGCTGGCATACCTCACACGAGAACTGAAGGCAGATCCTTGCGTGGCCCACGCCTTGGCATTAAGGACAGCCTGGGCCCTGGGCAACT ACCACCGCTTTTTCCGGCTCTACTGCCATGCACCCTGCATGTCTGGCTACCTCGTGGACAAGTTTGCAGATCGGGAGCGCAAGGTCGCCC TCAAGGCCATGATCAAAACGGGTTGGCCGGAGACCTACGACATGAATACCTCGGAGCCCAAGACGGAGCAGGAAAGCATCACTCCTGGGG GCCGGCCCCCCTACCGCAGCAATGCTCCCTGGCAGTGGAGCGGGCCCGCATCCCATAACTCTCTACCAGCCTCCAAGTGGGCCACTCCAA CCACTCCCGGCCATGCCCAGTCCCTGAGCCGGCCCCTGAAGCAGACCCCCATAGTCCCCTTCCGGGAGTCCCAGCCACTGCACAGCAAGA GGCCTGTCAGCTTCCCAGAAACCCCTTACACAGTATCACCAGCAGGGGCCGACAGAGTCCCTCCCTACCGACAGCCTTCTGGGAGCTTCT CCACCCCCGGTTCGGCCACCTACGTGAGATACAAGCCATCCCCAGAAAGGTACACGGCTGCCCCACACCCCCTGCTATCTCTTGATCCCC ACTTCAGCCACGATGGGACGTCCAGCGGCGACTCCTCTTCCGGCGGCCTGACCAGCCAGGAGAGCACCATGGAACGCCAGAAGCCAGAGC CTTTGTGGCATGTGCCTGCCCAGGCCAGGCTCTCAGCCATAGCCGGAAGCAGCGGGAACAAGCACCCGTCCAGGCAGGATGCAGCAGGCA AAGATTCCCCCAACAGGCATTCCAAAGGAGAACCTCAATACTCAAGTCATTCCAGCAGCAACACCCTCTCCAGCAACGCATCCAGCAGCC ACAGCGACGACCGCTGGTTCGACCCCCTGGACCCCCTGGAGCCAGAGCAAGACCCCCTCTCCAAGGGTGGCTCTAGTGACAGCGGCATCG ACACCACCCTCTACACCTCCAGCCCTAGCTGCATGTCCCTGGCCAAGGCTCCACGGCCCGCCAAGCCACACAAGCCCCCTGGAAGTATGG GCCTTTGTGGCGGGGGTCGCGAGGCCGCTGGGAGGTCCCACCACGCAGACAGGCGGCGGGAGGTCTCCCCTGCCCCCGCAGTTGCCGGCC AAAGCAAGGGCTACCGACCGAAGCTGTACTCCTCCGGCTCCAGCACCCCCACGGGACTGGCGGGGGGCAGCCGAGACCCACCGAGGCAGC CCAGTGACATGGGCTCGAGGGTTGGCTACCCCGCTCAGGTTTACAAAACTGCCAGTGCAGAGACTCCTCGGCCCTCCCAGCTGGCCCAGC CCAGCCCCTTTCAGCTCTCCGCCTCCGTCCCCAAGTCCTTCTTCTCCAAGCAGCCTGTACGCAATAAGCACCCAACAGGGTGGAAGAGAA CGGAGGAGCCCCCACCACGGCCACTCCCCTTCAGTGACCCAAAGAAGCAGGTGGACACGAACACCAAAAATGTCTTTGGGCAACCGAGGT TGAGGGCATCCCTCCGAGACCTCCGGTCACCACGGAAGAACTACAAATCCACCATCGAGGATGACCTGAAGAAACTCATCATCATGGACA ACCTGGGGCCAGAGCAGGAGAGAGACACGGGACAGTCACCGCAGAAGGGCCTGCAGCGGACGCTGTCGGACGAGAGCCTGTGCAGCGGGC GCCGGGAGCCCAGCTTCGCCAGCCCCGCTGGCCTAGAGCCAGGGCTGCCCAGCGACGTGCTCTTCACCAGCACCTGCGCCTTCCCGTCCA GCACGCTGCCTGCACGCCGCCAGCACCAGCACCCCCACCCGCCCGTCGGCCCCGGTGCCACCCCTGCCGCCGGCAGCGGCTTTCCCGAGA AGAAATCCACCATCTCAGCCTCGGAGCTCTCGCTGGCTGATGGGCGGGACCGCCCCCTGCGGCGCCTGGACCCTGGGCTGATGCCCCTGC CTGACACAGCTGCTGGCCTCGAGTGGTCCAGCCTGGTGAACGCAGCCAAGGCATACGAAGTGCAAAGAGCCGTCTCACTCTTCTCTCTGA ACGACCCGGCCCTGAGCCCGGACATCCCGCCTGCACACAGTCCTGTCCACAGCCACCTGAGCCTGGAGAGGGGACCCCCGACCCCCAGGA CCACCCCTACCATGAGCGAGGAGCCACCCCTGGATCTGACAGGCAAGGTGTACCAGCTGGAGGTGATGCTGAAACAGCTGCACACTGACC TGCAGAAGGAGAAGCAGGACAAGGTGGTGCTCCAGTCAGAGGTGGCCAGCCTGCGGCAGAACAACCAGCGGCTGCAGGAGGAGTCGCAGG CCGCCAGCGAGCAGCTGCGCAAGTTTGCGGAGATCTTCTGCAGGGAGAAGAAGGAGCTCTGAGGTGGGAGGCCGCCGCCCGCCTTCGCTC CTTCCCCTCAGGCCGTGGCCCTGCTGCCTCTCTCCCTCCACTCAGCTCCCAGCTGCCGGTGTGACCAAGATGACCCATCCAGGGCCCTCC CCATGGACACGGAAACTCCGATGGCCTCACTAGGGCTGTGAGTCAGGGTCAGCGCGCACAGCCCTCATGCCCCAGAGGGCGAAGTGGTCT CAGGCCTCCCTCCAAGCTGCCCAGCTGTGGTCCCGGTGAGCTGGGCTGTGCTTACACCGCTCCCGGGCCTGCCCCGCTGTCCCCATCTAG CCTCTTCCTGGGACCAGCCCTTCGAAGCTGATGGGGACGGAGAGAGGAGCCAGTCTCCAGACGCCTCGGCTCCAGGAGGTCACACAGCAG GTTTCTGCACCACGCACAACAAAGTTGCGGCTTGTGGGGCCGAGGCCCCTGCATGAAAAGTACAGCGTGAAAGCAACCCTTTCTTCCCCA CACCCAGAGAGGTGAGGCCCGCGTGGACACAGACCAGGGCGCCTCGGTCCCTAGCACGTGAGCTCCAAAAAGCACGAACATGATCCCCTC CCTAACCCCCTCCTCCCAAAAAGCAGCCAGGAGCACTTTCTTAGAGTTTAAATTATTTTCTTGGGGGCCTGAGGATAGAGAGAGGCAAGG CTAGCCTCCAGAGCCGATTTATTTGAGAGAGAAACTCTATTTGGATCTCCAGGACGGTTTATACGATCTTTTTCTATCAGCTCCTCTTCC GCCAGAGGCCACTGCACCTGGGCTAGGGGTCCACAGGCCCCTCCACCTTCCAGCTAACCAGGCCAGGCCGGGGCGGTGGAGCCACCACAC AGCCGACTCTCTCCTCCTCCTCCCGGCACGACCTGGCCCTGACCAGCAGCCTCGGCCTCTTCTGGGTTCCAGGAGGGGCTCCCGAAGCCC TCAGGACAGGGCTGGAGGAGAACAGCCTTCATCTCCTCCTCTGGTTTTTTTTTCCTTTGCAAGTCTCCCAGCCCATCTCTCCGAGCAGCG GCCACCAGACCCCCTCACCATGCTCCCCGGGGAGCACTGCACCCCGCGAACCCCACTGGACGCTGGTTCTCTAAAGGCAATAAGGGGCGG CCATGCCGGTGTGGTACCACGCTGTTCCTCCAGGAAACCGTTTCTTTTTTTCCTTCTTTAAAAGCAAACAGAAAAAGATATATATATATA TATATATATATTTATTTTTTCATGTAGAGTTGGCGCCAGAACAAGCCTGTATGGCCACAGTCTGTGGATTCATCCCCCCAACCTCAAGCT GAGGACCAAGGCGTGTCCCCTGTGGGCTGGGGGTCAGTGGGAGGACCAGAGGGATGAAGTCAGGGCAGGCCGGTGCCCTTTTTGGGAGGC ACCAGGCGGGGAGGAGTTGGCGGAGCAGGTCTGGCTGTGAGCCAGCACCAGGCAACCCGGCCCTTGTCCAGGGACCTCTGCTGCCTTCTC TCTGGGGTCAGGAACCTCAGAGGAGGGGGCTCTGGGGACTGCATAGGACGCAGGCACTCGGAGGTGCCGGTGTGGATGGGTGGGGGTGAG AGAAGAGGGTTCTTATCGCGTCTCCTGTGATCAGCCTCTGGCCCCCTGGAGGAGGAAACCTCAGCGCTGCCCCTGCCCCCACCCTCACCC CCAACACCAAGAGTGAGGTGGGCGTGCCCCAGGCAGCGTCCTCAGCCCTGGCCAGCTACTGTGATGCCATCTTCTCCCCCATCCCCTTCT CTGGGGGGCCCACCCGTCCCCCACCCCCACCCCTTAGACCCTCATCGGGTCCCTTTTTTTTTTTTTTTTTCAGTTGTCTCCTCCCATCTT CAGATCATTCGAATCATTTTGGGGACTTAATCATGTACATGGACAAGTGTAAATTATGATTTTTGGTTTTGTTTTCTGTTATTTTTTAAG GATTTCTGCAAAAACAGATCTATTTAATTTGAGGTTGATGTTCTATCCAATGGCCGAAGATAGCAGCAGGTTTTTTTTTTCATATGTTGA TTTGTTTCATTTGGATTTTTTTTTTATTATTCTTTATTGTCTTTTTTTTTTCCCCATCCCTGTCTTGAGATTTTCTGGCATGTTTCTGGA |
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FusionGenePPI for LENG8_SIPA1L3 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
LENG8 | RHOXF2, SMN1, PYGO1, SHFM1, CAND1, ATN1, MAPK1IP1L, DMRTB1, KDM1A, PRMT5, PRMT6, SMYD1, SUV39H1, SNRPA, CEP70, BMI1, PPP1CC, CRYAB, OAZ1, ZWINT, KIAA1107, ZFC3H1, SKA1, MEX3C, HYPK, PIP4K2A, CCDC59, ZNF263, ZNF512, IL27RA, ZSCAN31, ZNF324B, LGALS3BP, WDR55, MECP2, TTC25, SMARCB1 | SIPA1L3 | SFN, ELAVL1, FMNL1, YWHAQ, DYRK1B, LATS2, YWHAB, WDR83, SRPK2, CEP152, CEP135, NINL, ODF2, RPGRIP1L, CAPZA2, MYH9, MYO1C, PPP1CB, IQGAP1, SYNPO, MYO19, MYO18A, CDH1, PTPRK, LZTS2 |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for LENG8_SIPA1L3 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for LENG8_SIPA1L3 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |