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Center for Computational Systems Medicine
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FusionGeneSummary

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FusionProtFeature

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FusionGeneSequence

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FusionGenePPI

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Fusion gene ID: 19295

FusionGeneSummary for KSR1_MSI2

check button Fusion gene summary
Fusion gene informationFusion gene name: KSR1_MSI2
Fusion gene ID: 19295
HgeneTgene
Gene symbol

KSR1

MSI2

Gene ID

8844

124540

Gene namekinase suppressor of ras 1musashi RNA binding protein 2
SynonymsKSR|RSU2MSI2H
Cytomap

17q11.2

17q22

Type of geneprotein-codingprotein-coding
Descriptionkinase suppressor of Ras 1RNA-binding protein Musashi homolog 2musashi homolog 2musashi-2
Modification date2018052320180523
UniProtAcc

Q8IVT5

Q96DH6

Ensembl transtripts involved in fusion geneENST00000509603, ENST00000319524, 
ENST00000268763, ENST00000398988, 
ENST00000581975, ENST00000582410, 
ENST00000578981, 
ENST00000416426, 
ENST00000284073, ENST00000322684, 
ENST00000442934, ENST00000579180, 
ENST00000579505, 
Fusion gene scores* DoF score6 X 5 X 4=12023 X 13 X 8=2392
# samples 622
** MAII scorelog2(6/120*10)=-1
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
log2(22/2392*10)=-3.44264196067345
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: KSR1 [Title/Abstract] AND MSI2 [Title/Abstract] AND fusion [Title/Abstract]

Functional or gene categories assigned by FusionGDB annotationOncogene involved fusion gene, in-frame and retained their domain.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID

check button Fusion gene information from three resources
(ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018))
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
Data typeSourceCancer typeSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
TCGALDBRCATCGA-E2-A14V-01AKSR1chr17

25783900

+MSI2chr17

55478740

+
* LD: Li Ding group's fusion gene list
  RV: Roel Verhaak group's fusion gene list
  ChiTaRs fusion database

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
In-frameENST00000509603ENST00000416426KSR1chr17

25783900

+MSI2chr17

55478740

+
In-frameENST00000509603ENST00000284073KSR1chr17

25783900

+MSI2chr17

55478740

+
In-frameENST00000509603ENST00000322684KSR1chr17

25783900

+MSI2chr17

55478740

+
In-frameENST00000509603ENST00000442934KSR1chr17

25783900

+MSI2chr17

55478740

+
In-frameENST00000509603ENST00000579180KSR1chr17

25783900

+MSI2chr17

55478740

+
5CDS-intronENST00000509603ENST00000579505KSR1chr17

25783900

+MSI2chr17

55478740

+
In-frameENST00000319524ENST00000416426KSR1chr17

25783900

+MSI2chr17

55478740

+
In-frameENST00000319524ENST00000284073KSR1chr17

25783900

+MSI2chr17

55478740

+
In-frameENST00000319524ENST00000322684KSR1chr17

25783900

+MSI2chr17

55478740

+
In-frameENST00000319524ENST00000442934KSR1chr17

25783900

+MSI2chr17

55478740

+
In-frameENST00000319524ENST00000579180KSR1chr17

25783900

+MSI2chr17

55478740

+
5CDS-intronENST00000319524ENST00000579505KSR1chr17

25783900

+MSI2chr17

55478740

+
intron-3CDSENST00000268763ENST00000416426KSR1chr17

25783900

+MSI2chr17

55478740

+
intron-3CDSENST00000268763ENST00000284073KSR1chr17

25783900

+MSI2chr17

55478740

+
intron-3CDSENST00000268763ENST00000322684KSR1chr17

25783900

+MSI2chr17

55478740

+
intron-3CDSENST00000268763ENST00000442934KSR1chr17

25783900

+MSI2chr17

55478740

+
intron-3CDSENST00000268763ENST00000579180KSR1chr17

25783900

+MSI2chr17

55478740

+
intron-intronENST00000268763ENST00000579505KSR1chr17

25783900

+MSI2chr17

55478740

+
intron-3CDSENST00000398988ENST00000416426KSR1chr17

25783900

+MSI2chr17

55478740

+
intron-3CDSENST00000398988ENST00000284073KSR1chr17

25783900

+MSI2chr17

55478740

+
intron-3CDSENST00000398988ENST00000322684KSR1chr17

25783900

+MSI2chr17

55478740

+
intron-3CDSENST00000398988ENST00000442934KSR1chr17

25783900

+MSI2chr17

55478740

+
intron-3CDSENST00000398988ENST00000579180KSR1chr17

25783900

+MSI2chr17

55478740

+
intron-intronENST00000398988ENST00000579505KSR1chr17

25783900

+MSI2chr17

55478740

+
intron-3CDSENST00000581975ENST00000416426KSR1chr17

25783900

+MSI2chr17

55478740

+
intron-3CDSENST00000581975ENST00000284073KSR1chr17

25783900

+MSI2chr17

55478740

+
intron-3CDSENST00000581975ENST00000322684KSR1chr17

25783900

+MSI2chr17

55478740

+
intron-3CDSENST00000581975ENST00000442934KSR1chr17

25783900

+MSI2chr17

55478740

+
intron-3CDSENST00000581975ENST00000579180KSR1chr17

25783900

+MSI2chr17

55478740

+
intron-intronENST00000581975ENST00000579505KSR1chr17

25783900

+MSI2chr17

55478740

+
intron-3CDSENST00000582410ENST00000416426KSR1chr17

25783900

+MSI2chr17

55478740

+
intron-3CDSENST00000582410ENST00000284073KSR1chr17

25783900

+MSI2chr17

55478740

+
intron-3CDSENST00000582410ENST00000322684KSR1chr17

25783900

+MSI2chr17

55478740

+
intron-3CDSENST00000582410ENST00000442934KSR1chr17

25783900

+MSI2chr17

55478740

+
intron-3CDSENST00000582410ENST00000579180KSR1chr17

25783900

+MSI2chr17

55478740

+
intron-intronENST00000582410ENST00000579505KSR1chr17

25783900

+MSI2chr17

55478740

+
intron-3CDSENST00000578981ENST00000416426KSR1chr17

25783900

+MSI2chr17

55478740

+
intron-3CDSENST00000578981ENST00000284073KSR1chr17

25783900

+MSI2chr17

55478740

+
intron-3CDSENST00000578981ENST00000322684KSR1chr17

25783900

+MSI2chr17

55478740

+
intron-3CDSENST00000578981ENST00000442934KSR1chr17

25783900

+MSI2chr17

55478740

+
intron-3CDSENST00000578981ENST00000579180KSR1chr17

25783900

+MSI2chr17

55478740

+
intron-intronENST00000578981ENST00000579505KSR1chr17

25783900

+MSI2chr17

55478740

+

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FusionProtFeatures for KSR1_MSI2


check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
KSR1

Q8IVT5

MSI2

Q96DH6

Scaffolding protein that is part of a multiproteinsignaling complex. Promotes phosphorylation of Raf family membersand activation of downstream MAP kinases. Promotes activation ofMAPK1 and/or MAPK3, both in response to EGF and to cAMP. Does nothave kinase activity by itself. {ECO:0000250|UniProtKB:Q61097}. RNA binding protein that regulates the expression oftarget mRNAs at the translation level. May play a role in theproliferation and maintenance of stem cells in the central nervoussystem (By similarity). {ECO:0000250}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page

.

* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
>>>>>>>
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
TgeneMSI2chr17:25783900chr17:55478740ENST00000284073+414253_2601041951Compositional biasNote=Poly-Ala
TgeneMSI2chr17:25783900chr17:55478740ENST00000322684+310253_260100252Compositional biasNote=Poly-Ala
TgeneMSI2chr17:25783900chr17:55478740ENST00000579180+07253_2600152Compositional biasNote=Poly-Ala
TgeneMSI2chr17:25783900chr17:55478740ENST00000284073+414110_1871041951DomainRRM 2
TgeneMSI2chr17:25783900chr17:55478740ENST00000322684+310110_187100252DomainRRM 2
TgeneMSI2chr17:25783900chr17:55478740ENST00000579180+07110_1870152DomainRRM 2
TgeneMSI2chr17:25783900chr17:55478740ENST00000579180+0721_1110152DomainRRM 1

- In-frame and not-retained protein feature among the 13 regional features.
>>>>>
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneKSR1chr17:25783900chr17:55478740ENST00000268763+12217_21-149787Compositional biasNote=Poly-Gly
HgeneKSR1chr17:25783900chr17:55478740ENST00000268763+122289_292-149787Compositional biasNote=Poly-Pro
HgeneKSR1chr17:25783900chr17:55478740ENST00000268763+122613_883-149787DomainProtein kinase
HgeneKSR1chr17:25783900chr17:55478740ENST00000268763+1221_172-149787RegionMediates association with membranes
HgeneKSR1chr17:25783900chr17:55478740ENST00000268763+122347_391-149787Zinc fingerPhorbol-ester/DAG-type
TgeneMSI2chr17:25783900chr17:55478740ENST00000284073+41421_1111041951DomainRRM 1
TgeneMSI2chr17:25783900chr17:55478740ENST00000322684+31021_111100252DomainRRM 1


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FusionGeneSequence for KSR1_MSI2


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences.
(nt: nucleotides, aa: amino acids)

* Fusion amino acid sequences.
>In-frame_KSR1_ENST00000509603_chr17_25783900_+_MSI2_ENST00000416426_chr17_55478740_+_320aa
MDRAALRAAAMGEKKEGGGGGDAAAAEGGAGAAASRALQQCGQLQKLIDISIGSLRGLRTKCAVSNDLTQQEIRTLEMVTRTKKIFVGGL
SANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRGRARGLPYTM
DAFMLGMGMLGYPNFVATYGRGYPGFAPSYGYQFPGFPAAAYGPVAAAAVAAARGSVLNSYSAQPNFGAPASPAGSNPARPGGFPGANSP

>In-frame_KSR1_ENST00000509603_chr17_25783900_+_MSI2_ENST00000284073_chr17_55478740_+_302aa
MDRAALRAAAMGEKKEGGGGGDAAAAEGGAGAAASRALQQCGQLQKLIDISIGSLRGLRTKCAVSNDLTQQEIRTLEMVTRTKKIFVGGL
SANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRGRARGLPYTM
DAFMLGMGMLGYPNFVATYGRGYPGFAPSYGYQFPGFPAAAYGPVAAAAVAAARGSGSNPARPGGFPGANSPGPVADLYGPASQDSGVGN

>In-frame_KSR1_ENST00000509603_chr17_25783900_+_MSI2_ENST00000322684_chr17_55478740_+_229aa
MDRAALRAAAMGEKKEGGGGGDAAAAEGGAGAAASRALQQCGQLQKLIDISIGSLRGLRTKCAVSNDLTQQEIRTLEMVTRTKKIFVGGL
SANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRGRARGLPYTM

>In-frame_KSR1_ENST00000509603_chr17_25783900_+_MSI2_ENST00000442934_chr17_55478740_+_302aa
MDRAALRAAAMGEKKEGGGGGDAAAAEGGAGAAASRALQQCGQLQKLIDISIGSLRGLRTKCAVSNDLTQQEIRTLEMVTRTKKIFVGGL
SANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRGRARGLPYTM
DAFMLGMGMLGYPNFVATYGRGYPGFAPSYGYQFPGFPAAAYGPVAAAAVAAARGSGSNPARPGGFPGANSPGPVADLYGPASQDSGVGN

>In-frame_KSR1_ENST00000509603_chr17_25783900_+_MSI2_ENST00000579180_chr17_55478740_+_229aa
MDRAALRAAAMGEKKEGGGGGDAAAAEGGAGAAASRALQQCGQLQKLIDISIGSLRGLRTKCAVSNDLTQQEIRTLEMVTRTKKIFVGGL
SANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRGRARGLPYTM

>In-frame_KSR1_ENST00000319524_chr17_25783900_+_MSI2_ENST00000416426_chr17_55478740_+_320aa
MDRAALRAAAMGEKKEGGGGGDAAAAEGGAGAAASRALQQCGQLQKLIDISIGSLRGLRTKCAVSNDLTQQEIRTLEMVTRTKKIFVGGL
SANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRGRARGLPYTM
DAFMLGMGMLGYPNFVATYGRGYPGFAPSYGYQFPGFPAAAYGPVAAAAVAAARGSVLNSYSAQPNFGAPASPAGSNPARPGGFPGANSP

>In-frame_KSR1_ENST00000319524_chr17_25783900_+_MSI2_ENST00000284073_chr17_55478740_+_302aa
MDRAALRAAAMGEKKEGGGGGDAAAAEGGAGAAASRALQQCGQLQKLIDISIGSLRGLRTKCAVSNDLTQQEIRTLEMVTRTKKIFVGGL
SANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRGRARGLPYTM
DAFMLGMGMLGYPNFVATYGRGYPGFAPSYGYQFPGFPAAAYGPVAAAAVAAARGSGSNPARPGGFPGANSPGPVADLYGPASQDSGVGN

>In-frame_KSR1_ENST00000319524_chr17_25783900_+_MSI2_ENST00000322684_chr17_55478740_+_229aa
MDRAALRAAAMGEKKEGGGGGDAAAAEGGAGAAASRALQQCGQLQKLIDISIGSLRGLRTKCAVSNDLTQQEIRTLEMVTRTKKIFVGGL
SANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRGRARGLPYTM

>In-frame_KSR1_ENST00000319524_chr17_25783900_+_MSI2_ENST00000442934_chr17_55478740_+_302aa
MDRAALRAAAMGEKKEGGGGGDAAAAEGGAGAAASRALQQCGQLQKLIDISIGSLRGLRTKCAVSNDLTQQEIRTLEMVTRTKKIFVGGL
SANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRGRARGLPYTM
DAFMLGMGMLGYPNFVATYGRGYPGFAPSYGYQFPGFPAAAYGPVAAAAVAAARGSGSNPARPGGFPGANSPGPVADLYGPASQDSGVGN

>In-frame_KSR1_ENST00000319524_chr17_25783900_+_MSI2_ENST00000579180_chr17_55478740_+_229aa
MDRAALRAAAMGEKKEGGGGGDAAAAEGGAGAAASRALQQCGQLQKLIDISIGSLRGLRTKCAVSNDLTQQEIRTLEMVTRTKKIFVGGL
SANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRGRARGLPYTM


* Fusion transcript sequences (only coding sequence (CDS) region).
>In-frame_KSR1_ENST00000509603_chr17_25783900_+_MSI2_ENST00000416426_chr17_55478740_+_960nt
ATGGATAGAGCAGCGCTGCGCGCGGCGGCGATGGGAGAGAAGAAGGAGGGCGGTGGCGGGGGGGATGCGGCGGCCGCGGAGGGAGGCGCA
GGGGCCGCGGCCAGCCGGGCGCTGCAGCAGTGCGGGCAGCTCCAGAAGCTCATCGACATCTCCATCGGCAGCCTGCGCGGGCTGCGCACC
AAGTGCGCTGTGTCCAACGACCTCACCCAGCAGGAGATACGGACCCTGGAGATGGTCACAAGAACAAAGAAAATATTTGTAGGCGGGTTA
TCTGCGAACACAGTAGTGGAAGATGTAAAGCAATATTTCGAGCAGTTTGGCAAGGTGGAAGATGCAATGCTGATGTTTGATAAAACTACC
AACAGGCACAGAGGGTTTGGCTTTGTCACTTTTGAGAATGAAGATGTTGTGGAGAAAGTCTGTGAGATTCATTTCCATGAAATCAATAAT
AAAATGGTAGAATGTAAGAAAGCTCAGCCGAAAGAAGTCATGTTCCCACCTGGGACAAGAGGCCGGGCCCGGGGACTGCCTTACACCATG
GACGCGTTCATGCTTGGCATGGGGATGCTGGGATATCCCAACTTCGTGGCGACCTATGGCCGTGGCTACCCCGGATTTGCTCCAAGCTAT
GGCTATCAGTTCCCAGGCTTCCCAGCAGCGGCTTATGGACCAGTGGCAGCAGCGGCGGTGGCGGCAGCAAGAGGATCAGTCCTGAATAGC
TACAGTGCTCAACCGAATTTTGGCGCGCCCGCTTCCCCGGCAGGCTCCAACCCGGCGCGGCCCGGAGGCTTCCCGGGGGCCAACAGCCCA
GGACCTGTCGCCGATCTCTACGGCCCTGCCAGCCAGGACTCCGGAGTGGGGAATTACATAAGTGCGGCCAGCCCACAGCCGGGCTCGGGC

>In-frame_KSR1_ENST00000509603_chr17_25783900_+_MSI2_ENST00000284073_chr17_55478740_+_906nt
ATGGATAGAGCAGCGCTGCGCGCGGCGGCGATGGGAGAGAAGAAGGAGGGCGGTGGCGGGGGGGATGCGGCGGCCGCGGAGGGAGGCGCA
GGGGCCGCGGCCAGCCGGGCGCTGCAGCAGTGCGGGCAGCTCCAGAAGCTCATCGACATCTCCATCGGCAGCCTGCGCGGGCTGCGCACC
AAGTGCGCTGTGTCCAACGACCTCACCCAGCAGGAGATACGGACCCTGGAGATGGTCACAAGAACAAAGAAAATATTTGTAGGCGGGTTA
TCTGCGAACACAGTAGTGGAAGATGTAAAGCAATATTTCGAGCAGTTTGGCAAGGTGGAAGATGCAATGCTGATGTTTGATAAAACTACC
AACAGGCACAGAGGGTTTGGCTTTGTCACTTTTGAGAATGAAGATGTTGTGGAGAAAGTCTGTGAGATTCATTTCCATGAAATCAATAAT
AAAATGGTAGAATGTAAGAAAGCTCAGCCGAAAGAAGTCATGTTCCCACCTGGGACAAGAGGCCGGGCCCGGGGACTGCCTTACACCATG
GACGCGTTCATGCTTGGCATGGGGATGCTGGGATATCCCAACTTCGTGGCGACCTATGGCCGTGGCTACCCCGGATTTGCTCCAAGCTAT
GGCTATCAGTTCCCAGGCTTCCCAGCAGCGGCTTATGGACCAGTGGCAGCAGCGGCGGTGGCGGCAGCAAGAGGATCAGGCTCCAACCCG
GCGCGGCCCGGAGGCTTCCCGGGGGCCAACAGCCCAGGACCTGTCGCCGATCTCTACGGCCCTGCCAGCCAGGACTCCGGAGTGGGGAAT
TACATAAGTGCGGCCAGCCCACAGCCGGGCTCGGGCTTCGGCCACGGCATAGCTGGACCTTTGATTGCAACGGCCTTTACAAATGGATAC

>In-frame_KSR1_ENST00000509603_chr17_25783900_+_MSI2_ENST00000322684_chr17_55478740_+_687nt
ATGGATAGAGCAGCGCTGCGCGCGGCGGCGATGGGAGAGAAGAAGGAGGGCGGTGGCGGGGGGGATGCGGCGGCCGCGGAGGGAGGCGCA
GGGGCCGCGGCCAGCCGGGCGCTGCAGCAGTGCGGGCAGCTCCAGAAGCTCATCGACATCTCCATCGGCAGCCTGCGCGGGCTGCGCACC
AAGTGCGCTGTGTCCAACGACCTCACCCAGCAGGAGATACGGACCCTGGAGATGGTCACAAGAACAAAGAAAATATTTGTAGGCGGGTTA
TCTGCGAACACAGTAGTGGAAGATGTAAAGCAATATTTCGAGCAGTTTGGCAAGGTGGAAGATGCAATGCTGATGTTTGATAAAACTACC
AACAGGCACAGAGGGTTTGGCTTTGTCACTTTTGAGAATGAAGATGTTGTGGAGAAAGTCTGTGAGATTCATTTCCATGAAATCAATAAT
AAAATGGTAGAATGTAAGAAAGCTCAGCCGAAAGAAGTCATGTTCCCACCTGGGACAAGAGGCCGGGCCCGGGGACTGCCTTACACCATG
GACGCGTTCATGCTTGGCATGGGGATGCTGGGATATCCCAACTTCGTGGCGACCTATGGCCGTGGCTACCCCGGATTTGCTCCAAGCTAT

>In-frame_KSR1_ENST00000509603_chr17_25783900_+_MSI2_ENST00000442934_chr17_55478740_+_906nt
ATGGATAGAGCAGCGCTGCGCGCGGCGGCGATGGGAGAGAAGAAGGAGGGCGGTGGCGGGGGGGATGCGGCGGCCGCGGAGGGAGGCGCA
GGGGCCGCGGCCAGCCGGGCGCTGCAGCAGTGCGGGCAGCTCCAGAAGCTCATCGACATCTCCATCGGCAGCCTGCGCGGGCTGCGCACC
AAGTGCGCTGTGTCCAACGACCTCACCCAGCAGGAGATACGGACCCTGGAGATGGTCACAAGAACAAAGAAAATATTTGTAGGCGGGTTA
TCTGCGAACACAGTAGTGGAAGATGTAAAGCAATATTTCGAGCAGTTTGGCAAGGTGGAAGATGCAATGCTGATGTTTGATAAAACTACC
AACAGGCACAGAGGGTTTGGCTTTGTCACTTTTGAGAATGAAGATGTTGTGGAGAAAGTCTGTGAGATTCATTTCCATGAAATCAATAAT
AAAATGGTAGAATGTAAGAAAGCTCAGCCGAAAGAAGTCATGTTCCCACCTGGGACAAGAGGCCGGGCCCGGGGACTGCCTTACACCATG
GACGCGTTCATGCTTGGCATGGGGATGCTGGGATATCCCAACTTCGTGGCGACCTATGGCCGTGGCTACCCCGGATTTGCTCCAAGCTAT
GGCTATCAGTTCCCAGGCTTCCCAGCAGCGGCTTATGGACCAGTGGCAGCAGCGGCGGTGGCGGCAGCAAGAGGATCAGGCTCCAACCCG
GCGCGGCCCGGAGGCTTCCCGGGGGCCAACAGCCCAGGACCTGTCGCCGATCTCTACGGCCCTGCCAGCCAGGACTCCGGAGTGGGGAAT
TACATAAGTGCGGCCAGCCCACAGCCGGGCTCGGGCTTCGGCCACGGCATAGCTGGACCTTTGATTGCAACGGCCTTTACAAATGGATAC

>In-frame_KSR1_ENST00000509603_chr17_25783900_+_MSI2_ENST00000579180_chr17_55478740_+_687nt
ATGGATAGAGCAGCGCTGCGCGCGGCGGCGATGGGAGAGAAGAAGGAGGGCGGTGGCGGGGGGGATGCGGCGGCCGCGGAGGGAGGCGCA
GGGGCCGCGGCCAGCCGGGCGCTGCAGCAGTGCGGGCAGCTCCAGAAGCTCATCGACATCTCCATCGGCAGCCTGCGCGGGCTGCGCACC
AAGTGCGCTGTGTCCAACGACCTCACCCAGCAGGAGATACGGACCCTGGAGATGGTCACAAGAACAAAGAAAATATTTGTAGGCGGGTTA
TCTGCGAACACAGTAGTGGAAGATGTAAAGCAATATTTCGAGCAGTTTGGCAAGGTGGAAGATGCAATGCTGATGTTTGATAAAACTACC
AACAGGCACAGAGGGTTTGGCTTTGTCACTTTTGAGAATGAAGATGTTGTGGAGAAAGTCTGTGAGATTCATTTCCATGAAATCAATAAT
AAAATGGTAGAATGTAAGAAAGCTCAGCCGAAAGAAGTCATGTTCCCACCTGGGACAAGAGGCCGGGCCCGGGGACTGCCTTACACCATG
GACGCGTTCATGCTTGGCATGGGGATGCTGGGATATCCCAACTTCGTGGCGACCTATGGCCGTGGCTACCCCGGATTTGCTCCAAGCTAT

>In-frame_KSR1_ENST00000319524_chr17_25783900_+_MSI2_ENST00000416426_chr17_55478740_+_960nt
ATGGATAGAGCAGCGCTGCGCGCGGCGGCGATGGGAGAGAAGAAGGAGGGCGGTGGCGGGGGGGATGCGGCGGCCGCGGAGGGAGGCGCA
GGGGCCGCGGCCAGCCGGGCGCTGCAGCAGTGCGGGCAGCTCCAGAAGCTCATCGACATCTCCATCGGCAGCCTGCGCGGGCTGCGCACC
AAGTGCGCTGTGTCCAACGACCTCACCCAGCAGGAGATACGGACCCTGGAGATGGTCACAAGAACAAAGAAAATATTTGTAGGCGGGTTA
TCTGCGAACACAGTAGTGGAAGATGTAAAGCAATATTTCGAGCAGTTTGGCAAGGTGGAAGATGCAATGCTGATGTTTGATAAAACTACC
AACAGGCACAGAGGGTTTGGCTTTGTCACTTTTGAGAATGAAGATGTTGTGGAGAAAGTCTGTGAGATTCATTTCCATGAAATCAATAAT
AAAATGGTAGAATGTAAGAAAGCTCAGCCGAAAGAAGTCATGTTCCCACCTGGGACAAGAGGCCGGGCCCGGGGACTGCCTTACACCATG
GACGCGTTCATGCTTGGCATGGGGATGCTGGGATATCCCAACTTCGTGGCGACCTATGGCCGTGGCTACCCCGGATTTGCTCCAAGCTAT
GGCTATCAGTTCCCAGGCTTCCCAGCAGCGGCTTATGGACCAGTGGCAGCAGCGGCGGTGGCGGCAGCAAGAGGATCAGTCCTGAATAGC
TACAGTGCTCAACCGAATTTTGGCGCGCCCGCTTCCCCGGCAGGCTCCAACCCGGCGCGGCCCGGAGGCTTCCCGGGGGCCAACAGCCCA
GGACCTGTCGCCGATCTCTACGGCCCTGCCAGCCAGGACTCCGGAGTGGGGAATTACATAAGTGCGGCCAGCCCACAGCCGGGCTCGGGC

>In-frame_KSR1_ENST00000319524_chr17_25783900_+_MSI2_ENST00000284073_chr17_55478740_+_906nt
ATGGATAGAGCAGCGCTGCGCGCGGCGGCGATGGGAGAGAAGAAGGAGGGCGGTGGCGGGGGGGATGCGGCGGCCGCGGAGGGAGGCGCA
GGGGCCGCGGCCAGCCGGGCGCTGCAGCAGTGCGGGCAGCTCCAGAAGCTCATCGACATCTCCATCGGCAGCCTGCGCGGGCTGCGCACC
AAGTGCGCTGTGTCCAACGACCTCACCCAGCAGGAGATACGGACCCTGGAGATGGTCACAAGAACAAAGAAAATATTTGTAGGCGGGTTA
TCTGCGAACACAGTAGTGGAAGATGTAAAGCAATATTTCGAGCAGTTTGGCAAGGTGGAAGATGCAATGCTGATGTTTGATAAAACTACC
AACAGGCACAGAGGGTTTGGCTTTGTCACTTTTGAGAATGAAGATGTTGTGGAGAAAGTCTGTGAGATTCATTTCCATGAAATCAATAAT
AAAATGGTAGAATGTAAGAAAGCTCAGCCGAAAGAAGTCATGTTCCCACCTGGGACAAGAGGCCGGGCCCGGGGACTGCCTTACACCATG
GACGCGTTCATGCTTGGCATGGGGATGCTGGGATATCCCAACTTCGTGGCGACCTATGGCCGTGGCTACCCCGGATTTGCTCCAAGCTAT
GGCTATCAGTTCCCAGGCTTCCCAGCAGCGGCTTATGGACCAGTGGCAGCAGCGGCGGTGGCGGCAGCAAGAGGATCAGGCTCCAACCCG
GCGCGGCCCGGAGGCTTCCCGGGGGCCAACAGCCCAGGACCTGTCGCCGATCTCTACGGCCCTGCCAGCCAGGACTCCGGAGTGGGGAAT
TACATAAGTGCGGCCAGCCCACAGCCGGGCTCGGGCTTCGGCCACGGCATAGCTGGACCTTTGATTGCAACGGCCTTTACAAATGGATAC

>In-frame_KSR1_ENST00000319524_chr17_25783900_+_MSI2_ENST00000322684_chr17_55478740_+_687nt
ATGGATAGAGCAGCGCTGCGCGCGGCGGCGATGGGAGAGAAGAAGGAGGGCGGTGGCGGGGGGGATGCGGCGGCCGCGGAGGGAGGCGCA
GGGGCCGCGGCCAGCCGGGCGCTGCAGCAGTGCGGGCAGCTCCAGAAGCTCATCGACATCTCCATCGGCAGCCTGCGCGGGCTGCGCACC
AAGTGCGCTGTGTCCAACGACCTCACCCAGCAGGAGATACGGACCCTGGAGATGGTCACAAGAACAAAGAAAATATTTGTAGGCGGGTTA
TCTGCGAACACAGTAGTGGAAGATGTAAAGCAATATTTCGAGCAGTTTGGCAAGGTGGAAGATGCAATGCTGATGTTTGATAAAACTACC
AACAGGCACAGAGGGTTTGGCTTTGTCACTTTTGAGAATGAAGATGTTGTGGAGAAAGTCTGTGAGATTCATTTCCATGAAATCAATAAT
AAAATGGTAGAATGTAAGAAAGCTCAGCCGAAAGAAGTCATGTTCCCACCTGGGACAAGAGGCCGGGCCCGGGGACTGCCTTACACCATG
GACGCGTTCATGCTTGGCATGGGGATGCTGGGATATCCCAACTTCGTGGCGACCTATGGCCGTGGCTACCCCGGATTTGCTCCAAGCTAT

>In-frame_KSR1_ENST00000319524_chr17_25783900_+_MSI2_ENST00000442934_chr17_55478740_+_906nt
ATGGATAGAGCAGCGCTGCGCGCGGCGGCGATGGGAGAGAAGAAGGAGGGCGGTGGCGGGGGGGATGCGGCGGCCGCGGAGGGAGGCGCA
GGGGCCGCGGCCAGCCGGGCGCTGCAGCAGTGCGGGCAGCTCCAGAAGCTCATCGACATCTCCATCGGCAGCCTGCGCGGGCTGCGCACC
AAGTGCGCTGTGTCCAACGACCTCACCCAGCAGGAGATACGGACCCTGGAGATGGTCACAAGAACAAAGAAAATATTTGTAGGCGGGTTA
TCTGCGAACACAGTAGTGGAAGATGTAAAGCAATATTTCGAGCAGTTTGGCAAGGTGGAAGATGCAATGCTGATGTTTGATAAAACTACC
AACAGGCACAGAGGGTTTGGCTTTGTCACTTTTGAGAATGAAGATGTTGTGGAGAAAGTCTGTGAGATTCATTTCCATGAAATCAATAAT
AAAATGGTAGAATGTAAGAAAGCTCAGCCGAAAGAAGTCATGTTCCCACCTGGGACAAGAGGCCGGGCCCGGGGACTGCCTTACACCATG
GACGCGTTCATGCTTGGCATGGGGATGCTGGGATATCCCAACTTCGTGGCGACCTATGGCCGTGGCTACCCCGGATTTGCTCCAAGCTAT
GGCTATCAGTTCCCAGGCTTCCCAGCAGCGGCTTATGGACCAGTGGCAGCAGCGGCGGTGGCGGCAGCAAGAGGATCAGGCTCCAACCCG
GCGCGGCCCGGAGGCTTCCCGGGGGCCAACAGCCCAGGACCTGTCGCCGATCTCTACGGCCCTGCCAGCCAGGACTCCGGAGTGGGGAAT
TACATAAGTGCGGCCAGCCCACAGCCGGGCTCGGGCTTCGGCCACGGCATAGCTGGACCTTTGATTGCAACGGCCTTTACAAATGGATAC

>In-frame_KSR1_ENST00000319524_chr17_25783900_+_MSI2_ENST00000579180_chr17_55478740_+_687nt
ATGGATAGAGCAGCGCTGCGCGCGGCGGCGATGGGAGAGAAGAAGGAGGGCGGTGGCGGGGGGGATGCGGCGGCCGCGGAGGGAGGCGCA
GGGGCCGCGGCCAGCCGGGCGCTGCAGCAGTGCGGGCAGCTCCAGAAGCTCATCGACATCTCCATCGGCAGCCTGCGCGGGCTGCGCACC
AAGTGCGCTGTGTCCAACGACCTCACCCAGCAGGAGATACGGACCCTGGAGATGGTCACAAGAACAAAGAAAATATTTGTAGGCGGGTTA
TCTGCGAACACAGTAGTGGAAGATGTAAAGCAATATTTCGAGCAGTTTGGCAAGGTGGAAGATGCAATGCTGATGTTTGATAAAACTACC
AACAGGCACAGAGGGTTTGGCTTTGTCACTTTTGAGAATGAAGATGTTGTGGAGAAAGTCTGTGAGATTCATTTCCATGAAATCAATAAT
AAAATGGTAGAATGTAAGAAAGCTCAGCCGAAAGAAGTCATGTTCCCACCTGGGACAAGAGGCCGGGCCCGGGGACTGCCTTACACCATG
GACGCGTTCATGCTTGGCATGGGGATGCTGGGATATCCCAACTTCGTGGCGACCTATGGCCGTGGCTACCCCGGATTTGCTCCAAGCTAT


* Fusion transcript sequences (Full-length transcript).
>In-frame_KSR1_ENST00000509603_chr17_25783900_+_MSI2_ENST00000416426_chr17_55478740_+_1564nt
ATGGATAGAGCAGCGCTGCGCGCGGCGGCGATGGGAGAGAAGAAGGAGGGCGGTGGCGGGGGGGATGCGGCGGCCGCGGAGGGAGGCGCA
GGGGCCGCGGCCAGCCGGGCGCTGCAGCAGTGCGGGCAGCTCCAGAAGCTCATCGACATCTCCATCGGCAGCCTGCGCGGGCTGCGCACC
AAGTGCGCTGTGTCCAACGACCTCACCCAGCAGGAGATACGGACCCTGGAGATGGTCACAAGAACAAAGAAAATATTTGTAGGCGGGTTA
TCTGCGAACACAGTAGTGGAAGATGTAAAGCAATATTTCGAGCAGTTTGGCAAGGTGGAAGATGCAATGCTGATGTTTGATAAAACTACC
AACAGGCACAGAGGGTTTGGCTTTGTCACTTTTGAGAATGAAGATGTTGTGGAGAAAGTCTGTGAGATTCATTTCCATGAAATCAATAAT
AAAATGGTAGAATGTAAGAAAGCTCAGCCGAAAGAAGTCATGTTCCCACCTGGGACAAGAGGCCGGGCCCGGGGACTGCCTTACACCATG
GACGCGTTCATGCTTGGCATGGGGATGCTGGGATATCCCAACTTCGTGGCGACCTATGGCCGTGGCTACCCCGGATTTGCTCCAAGCTAT
GGCTATCAGTTCCCAGGCTTCCCAGCAGCGGCTTATGGACCAGTGGCAGCAGCGGCGGTGGCGGCAGCAAGAGGATCAGTCCTGAATAGC
TACAGTGCTCAACCGAATTTTGGCGCGCCCGCTTCCCCGGCAGGCTCCAACCCGGCGCGGCCCGGAGGCTTCCCGGGGGCCAACAGCCCA
GGACCTGTCGCCGATCTCTACGGCCCTGCCAGCCAGGACTCCGGAGTGGGGAATTACATAAGTGCGGCCAGCCCACAGCCGGGCTCGGGC
TTCGGCCACGGCATAGCTGGACCTTTGATTGCAACGGCCTTTACAAATGGATACCATTGAGCAGGTGCTTTCGTTGCCATCTCACTCTGA
GAGCATACCTGGATGTCCAGGCAAGACTGGGCGAAGTTTCTGAGTGGCCCTTTGTTTAGGTGATGTCCTCAGACCTGGACCCCCACCAGC
CTCACTCCCCATCCCAACCAGAGATGGCTCACTTCGGATCGAGGGTTGACTACATCTCATCATCTCACGAATCTGCTGTAATATAAGACA
ACAGCTTTTAAATGTGTATATAACCCATGATTTCGGTTTTGTTTTGTTTTGTTTTTCTTGATGGTTTCCCTCTCCCTCCCTCTCTTCCCA
TTCTCCTTTTAAATCTCTTTGAATCACATTTGGTAGTGATTTTGACTTAGTCCAGTAGTCACATAGCTTTAATATCTAGTTCAAAGCTAA
CCATAGTATAATTGTTATATTAAGGAGTTATTTTTTCTTAAAACATTTTTTTTTGCTTGTTTTGGTTCTGTTCTCACTTTTAAAGGATGC
TGAGATGGTAATATGACTCTCCATATTTTGGTACCAATTCTGAGACTGTATGAATTTTCAGGTGGAACTTTAGCACACACTGAAGCAAAG

>In-frame_KSR1_ENST00000509603_chr17_25783900_+_MSI2_ENST00000284073_chr17_55478740_+_6074nt
ATGGATAGAGCAGCGCTGCGCGCGGCGGCGATGGGAGAGAAGAAGGAGGGCGGTGGCGGGGGGGATGCGGCGGCCGCGGAGGGAGGCGCA
GGGGCCGCGGCCAGCCGGGCGCTGCAGCAGTGCGGGCAGCTCCAGAAGCTCATCGACATCTCCATCGGCAGCCTGCGCGGGCTGCGCACC
AAGTGCGCTGTGTCCAACGACCTCACCCAGCAGGAGATACGGACCCTGGAGATGGTCACAAGAACAAAGAAAATATTTGTAGGCGGGTTA
TCTGCGAACACAGTAGTGGAAGATGTAAAGCAATATTTCGAGCAGTTTGGCAAGGTGGAAGATGCAATGCTGATGTTTGATAAAACTACC
AACAGGCACAGAGGGTTTGGCTTTGTCACTTTTGAGAATGAAGATGTTGTGGAGAAAGTCTGTGAGATTCATTTCCATGAAATCAATAAT
AAAATGGTAGAATGTAAGAAAGCTCAGCCGAAAGAAGTCATGTTCCCACCTGGGACAAGAGGCCGGGCCCGGGGACTGCCTTACACCATG
GACGCGTTCATGCTTGGCATGGGGATGCTGGGATATCCCAACTTCGTGGCGACCTATGGCCGTGGCTACCCCGGATTTGCTCCAAGCTAT
GGCTATCAGTTCCCAGGCTTCCCAGCAGCGGCTTATGGACCAGTGGCAGCAGCGGCGGTGGCGGCAGCAAGAGGATCAGGCTCCAACCCG
GCGCGGCCCGGAGGCTTCCCGGGGGCCAACAGCCCAGGACCTGTCGCCGATCTCTACGGCCCTGCCAGCCAGGACTCCGGAGTGGGGAAT
TACATAAGTGCGGCCAGCCCACAGCCGGGCTCGGGCTTCGGCCACGGCATAGCTGGACCTTTGATTGCAACGGCCTTTACAAATGGATAC
CATTGAGCAGGTGCTTTCGTTGCCATCTCACTCTGAGAGCATACCTGGATGTCCAGGCAAGACTGGGCGAAGTTTCTGAGTGGCCCTTTG
TTTAGGTGATGTCCTCAGACCTGGACCCCCACCAGCCTCACTCCCCATCCCAACCAGAGATGGCTCACTTCGGATCGAGGGTTGACTACA
TCTCATCATCTCACGAATCTGCTGTAATATAAGACAACAGCTTTTAAATGTGTATATAACCCATGATTTCGGTTTTGTTTTGTTTTGTTT
TTCTTGATGGTTTCCCTCTCCCTCCCTCTCTTCCCATTCTCCTTTTAAATCTCTTTGAATCACATTTGGTAGTGATTTTGACTTAGTCCA
GTAGTCACATAGCTTTAATATCTAGTTCAAAGCTAACCATAGTATAATTGTTATATTAAGGAGTTATTTTTTCTTAAAACATTTTTTTTT
GCTTGTTTTGGTTCTGTTCTCACTTTTAAAGGATGCTGAGATGGTAATATGACTCTCCATATTTTGGTACCAATTCTGAGACTGTATGAA
TTTTCAGGTGGAACTTTAGCACACACTGAAGCAAAGTTGTGAAGTGCAGGGCGGGAGGTGGGCGTGAGCTTTCTATTTTGCGTTGTAGAA
GAAGTGAGATGTAGTAAGCTAATTAACAGACTTTCTAGCAGTTCTTTTTGTGATGTCTCTTTGTTAATCTGAGTCTATCTATTTTCGGCA
ATAAGGTAAGGACGACAGTGTTTTGAGTGTCCTCCTTTTCTATAAGTGCTTTTTTTCTGTTGAAAGAGGTGATATTATAAGGTTTTTTGA
AATTGTGAATTCTAAAAAAGAAATGTTGTAAATACAATTCCATTAACTACATAGAAACTATTAAGAAAGAGAGAATCAAAAATATTTTTG
TGAGGGAGTCGGTCCCAGGCAGTTTGATGCTCTGTGGAAGGAGGCGGGAAGGGAACGTTGGCCAAGTCAGTTACTGAGATGAAGATCGCC
CAGCTGCCAGGACCACCCCAGGACAAGTTAGAGCACTGTTTAGCTCCTTTGTCTGTGTGATAGACCTAAGAACTGTATTAGTGTTGTACC
AGCCTATTAACCTCTTGTCTGTGCACAGCTTCAAATGTTACCGTCTAGTTAGATTTTTATTTAAAATATGAAAAACTGCTTTTCCCAAGA
TGTTTTTTAAAAACAAAGCTACAATTTTAATATTTAACATATTTAAAGTTTCAAAGCACACCTGTTTGGCTTGGGTGGGGGTGGGGTGGG
GGGGACATTCTTTTTCAGTCTTAATTTTTAAATATTTGATCATTTTCTATTGTCCAATCATTTCAGCACCTCCAAAGGTCCCTAGGACAC
TTTGCCTCTCTTCTCCCCCTGCCCCCCACCCTGCTCCCACATCTGGGGGCCCATGGGCCAGGAGTGGATAAGCCTGCATTAATACAACCT
TTCTCCATTCACTTTCTATTTACAAATTAGGAAAGCAACCTTTTGGTTTATATATATTTTTTTTAATACCTCAGTGCTGCAAGTATCACC
AGAGAGGCTATGGAAGAATTTTTTTTTAATTTATTGTAGATGTAAACAGAATTTTAAAAATAAAAAGTATAAACATCACTGCACTGTGAC
TGGTGGGAAAAACTGACAGTTTCCTCTTTGCACATGTTTAACATTTGGCTGTTATAATATATGGTCCTCGGTTGGGGAAAGATACTTATG
ATGAAGGATATTTTTTAATTTAACTTTTTTTTAAATATTGGTAATAGGTCGGCAACAGCAACTATAGAAGTACAACTCAATAGATGGCAT
TAAAACATATTGTAGTGTGGATATATATTTTTTCTTTTTTAAAATGTGATATTGACGTTTTATTAATATTTTTTAAATTGTTACGTTTAT
AAATTTGGTACTTAAGGCACAGCCAGTATGAGACACTGAATGCGACATTTATTATAAAGAGCTGCTGCACTCCTATTTTTATAAATTTTA
CTAACAAAGTAGACTAATGTAGACATTCACAGACATGGTAGGGCAAAAGCATCTTCAAACTAAAGACTCCAAAATGCTAACTCAGAAAGA
AAGAAAAAACCCGTTTTCAATTCTAATGAAACAGCAACAACATTTTTTTTAATTAAAAAAAAAATCATGTTCTTTGTTTTTCTAATAAAA
TGTTAGGTTGTTTGGTGAGGTTTTTTTGTTGTTTTTTTCCTTTCTTTGTTTCTTTTCTTTTCCCCCAAACAACCAGATTAAATGCTGAGC
GCTTTTAAAATATCAAAACTTGTTCAAGTCATAAAACAACAAAACATAAGTTTTATTTAAAAAAAAAAAAAGAAAGAAAAAATAGTAAAT
TCCCAGAAATTCAGTGTTTAGACGAGGGAATTTAATTCCTATTTTGTCCATGTTGGTGATGTACTGTACTTCCCTTCCTTTTCTCTGCAT
CCCCCATCACCTCATAGAAGACTCTTTGTTGATCATTGTATGTTAATAATGTATAAAATGGCTATCTTGTAAGCGTGCTGTCCTGGTACT
AGTGTAGCGACTTTTTTTCTCCTCTTTCTTCTAGTACATATTGATAGGTATAACATAATTAAGGTTTAAAAAAAATTAGACATAGTTATT
CAGATTTAGGACCAGTAAGGATAGAACTTTCTCTTATTTATGAAAAAAAATGCTAATAATTTTGGGGCAGTTTTTTCCTTTAATTATTTT
TTTCAATTTCAAGTTTAATTTTATTTTAGCTGATCTGATGTGGTTTCAACTAACCCAAGGTCTCACCATGTTAAAATGCCGGCGGACTCT
ACGGCGTTTTGTAGATCCCCCCCCCCCCACCCACTGTGAAGGGGTGCCATACTACCTTAAATGCTAATGCTAGATATGCAAAACTGGATT
TTTTTAATTTATTTTTTAAAAGAGGGAGGCATGGTATATTAAAATGATTTTACTAAGAGAAAAAATATTTTTTTAAGAATGCTCAGAAGA
AATTGATAATCTGTGTGAATATGTTTTAGATGTTTATATACCTTTTGAAGAGACCCAGTAGCCCATAGCACAAATCTTGTGGAAATCCGA
TATGTTTTAATGTGGCTACCTAGGTTTAAGGTTCACGTTAGTCCCCCCATTCCATCTAGAAGTCCATTTTGAAAGATTTTTGTAAATTCT
TTTAACACTGATGTTTCAGCCTCGTCTTTGTTTCAGTTAAGCTCAATGGCGAACATGGGAACCACCTTTCGCCTTCCCTGGGGGAGAAAC
CCTCTTGGCTGATGGCTTTTCCCCGGAATTATCAAACAGCCACCGGGTGACTTTCTGGCTTCCAGATCCATCTGCCTGAGACCCCCGAAC
TCCTCTCCTCCCAAGCAGAGGCGAGTGAGTGGCATTAGCTCCCGGACCCATTCCCGGTCCTAGCTGGGCATGGGGCTGACGGAGATGACC
AAGCCTTGGTCTGCTCTCTAGCAGCTTCCACAGACTTGGCTCGTGGCCTTCCTTATATCCACTGGGAACAAACAGCCTCGCGCTCTATAC
CAAACAGCCTCGCGCTCTATCCCAGTCGCCCATTAGCTTGATTCAAACAAAGCCCCAGCAGGCCTTTGCGTTTTTATCCTTCATAACCTT
CATCTTAATTTGAACTTGTAGCTTGGACTTTAAGGTAGCATGGCTCTATTGCTGTCAATTTACTGTTTCACTGCACAGCAATCACAGCCA
GTGAATGTTACACACATCTTGCTAGACTAGTATAAAAATCATTGGGTAATTGTTGGTTCTAATGACCTGAAAGGTGTTCAGTTTTTGTTC
TTGGTTTTGTTTTGTTTTTGATTTCTTGGGGGTGGGTTTTGCTTGTTGTTCCTTTTCATTTGGGGGTTTTTGGGGAAAAAATTTATTTTT
GGTTCCAAATAGAAAAACAAAACCTATTTTGATCTTTAGTGCAAACGAGGGCTAGGGACTTAGCCTCCTCCACCACCTCCACACTGCTTC
ATTCTGCCATTCACTCACTGCAGCATATTCAAGAATAAAGCAATATCGTTTACTACATTTTTTATTGAAGGTCAGCCATGCTTTCTGTAT
TATATTGCATATGAAATTGTTTACAAAAGAAACACTAACTCATACTTCTCTTTATTGGTTGCAAGTGGCACGCAGGAACAGAGGGAGAGT
GGGGGGCTGGTGGGGGAGGGGAGATTTTTTTTTTTTTTTCTTGAATGTGCTTCGCAAGCCAGGCTATCTTCCAAGGAAGGCAGACAGTGG
GAGAGCAGAGGGACTGACTGCAGGCAAGCACATTGAAGAAAGACACTGGCGGGTTTCCCCACCCTCACCCCAAAGCAGAAAACTAGCAGA
CGTCAGCTCAGCCCCGTCCTGGGCACAGACACTACACAAGGAGACGCTGGAAGTTAAGCAATACTTTAATACTGTAATATGTTTGTTTTC
TTTTTCTTTCTTTTTTTTCTACCAAAAAAAAGTAAGTAAACTAAAACACAAAAACATATAAATAAAATCCATCCCTCTTGTCGGGGACCT
GCAGGGGGGCAACCTTAATCCAAACACCTGGCTATCAAATAATCAGAATGTATTGTCTCAGACAGGATTTCAGTTCCGGGAGGCAGGGGC
ATGATGGGGGAGGGGGCCGGAGGCTGAGAGACAAAAGTTCCAGAGCCTCCCTCGAAGGTTCTCTACTACTGTATTCTGTACATAATGTAC
CATCCCATGTGGAATCTGTGAGTGTCCTCTTAAGTAGCGTGGGCTAGCCAATCTGCCGTTCATGGTGTATTGTAAACTCCGAATTCCATA
TGTAATAGGATGCAAGTCTAAGCGTTTCATGTGGACATAAATGTATCTAAATAAAACTTTCCCTAGCACTGTGGCTGACCTCACCCTTAC
TTTTATACTTTAGTATGAAACTGATGAGAACTTTGGTAGTGAGTATTTTTTTTATATATATACATATATATGTACTATCTATATATATAT
CTCAAGCATCTTTCAGGTCTTTGTGTGTGGCTTTCTTAAAGCCCTGTTGTAAAAAATTACTATGTGGATGGCAGTCTCTCACATCACAGA
TGTGGAAAGTATAATTTTATATTTGTATTTTCAAATAAATAAGTTTGTGAAAGGTTTCCATCCTCTACTGTGGTCCAGAAATCAATGTGT

>In-frame_KSR1_ENST00000509603_chr17_25783900_+_MSI2_ENST00000322684_chr17_55478740_+_1756nt
ATGGATAGAGCAGCGCTGCGCGCGGCGGCGATGGGAGAGAAGAAGGAGGGCGGTGGCGGGGGGGATGCGGCGGCCGCGGAGGGAGGCGCA
GGGGCCGCGGCCAGCCGGGCGCTGCAGCAGTGCGGGCAGCTCCAGAAGCTCATCGACATCTCCATCGGCAGCCTGCGCGGGCTGCGCACC
AAGTGCGCTGTGTCCAACGACCTCACCCAGCAGGAGATACGGACCCTGGAGATGGTCACAAGAACAAAGAAAATATTTGTAGGCGGGTTA
TCTGCGAACACAGTAGTGGAAGATGTAAAGCAATATTTCGAGCAGTTTGGCAAGGTGGAAGATGCAATGCTGATGTTTGATAAAACTACC
AACAGGCACAGAGGGTTTGGCTTTGTCACTTTTGAGAATGAAGATGTTGTGGAGAAAGTCTGTGAGATTCATTTCCATGAAATCAATAAT
AAAATGGTAGAATGTAAGAAAGCTCAGCCGAAAGAAGTCATGTTCCCACCTGGGACAAGAGGCCGGGCCCGGGGACTGCCTTACACCATG
GACGCGTTCATGCTTGGCATGGGGATGCTGGGATATCCCAACTTCGTGGCGACCTATGGCCGTGGCTACCCCGGATTTGCTCCAAGCTAT
GGCTATCAGTTCCCAGACTATTTGCCGGTTTCACAAGACATAATTTTTATCAACTAGCTCTTAAGAGAGGCATAGCAAAGTGGGGGTTGC
TACCATTTCTAGAGAGAGAGGACACAGTCCCGGCCTGGGCTGCCCCCGCTCCAGTCAATGCTCACTGAAAGTCTGTCTTAGCTGCCTGTT
TGAATGACTGTTCTTTTTCTCATTTTTAATTCTTGGACTCATGTCCTCATTGCTTCACTCAATTAAAAAAAAATTATTCTCCAGTCCCCT
CCCACTTTGCTTCTTGTATGCATTGTGACCGACCCCACTTCCTCAGAATGTAACGGGGCCAGAGGGAAACTTCTCACAAACTTCGTAGAG
CCTCCTCAGGGGAAGCTAGGAAGAAGACATCAAATGTTTTTAAGTCATGACCAAACAGGCTTGTTGGGGACATATCATGGGGTGAGCTTT
GAAGTGCTGGTGGTCCAGAGGGGTTGCAGATACGTGACTTGGAGCACCCGTGTCTTACGATGGACAGTGATAAAGGTGAACACACAGAGA
CAGACTATTCTCTAAGAATGTGAGAAACCTGATCTGGAAGAGGAGCTATATAAACACTATCTGACTATCTTTGTCTTTTGGGGCCAGTGG
CTGTTGGCATAATCACAAGCCTGTCTGTCTTCGAGAAGGGACAGTGGAGTCATCCAGGTGCTGCCACATGACAGGCACGGTGGGCACCGA
TCCACAGTGGGCCCCGCCTTCCCCAGCTCGCCTCCCTGCCTGTGCTGGCCTGGCCTTGCCTGCTGGCACCATTGGAGTAGGAGGGGGTGG
AACACAGGGGGCCCATCCTGATCAGGCCCCATCTCAAGGTTGGCACTCCTGCCCATCACCCTTAGAAGGATCTTTTCCCATGGCTTGACT
TCCTTCATTTCCCTAACTGAAATACACCCACTCTCTTGGAATAATGACGTACCACTCAGTTGGACCCTCAAGAGTCACTGCTTTGTCTGT
GCTGGTAGTTTGTGAGAAGTGACCCGCACGCTTCCATTTGATGCATTTGATGTGAGTGAATCCATACATTTGAATGTCATTGTCCTTGAG

>In-frame_KSR1_ENST00000509603_chr17_25783900_+_MSI2_ENST00000442934_chr17_55478740_+_1686nt
ATGGATAGAGCAGCGCTGCGCGCGGCGGCGATGGGAGAGAAGAAGGAGGGCGGTGGCGGGGGGGATGCGGCGGCCGCGGAGGGAGGCGCA
GGGGCCGCGGCCAGCCGGGCGCTGCAGCAGTGCGGGCAGCTCCAGAAGCTCATCGACATCTCCATCGGCAGCCTGCGCGGGCTGCGCACC
AAGTGCGCTGTGTCCAACGACCTCACCCAGCAGGAGATACGGACCCTGGAGATGGTCACAAGAACAAAGAAAATATTTGTAGGCGGGTTA
TCTGCGAACACAGTAGTGGAAGATGTAAAGCAATATTTCGAGCAGTTTGGCAAGGTGGAAGATGCAATGCTGATGTTTGATAAAACTACC
AACAGGCACAGAGGGTTTGGCTTTGTCACTTTTGAGAATGAAGATGTTGTGGAGAAAGTCTGTGAGATTCATTTCCATGAAATCAATAAT
AAAATGGTAGAATGTAAGAAAGCTCAGCCGAAAGAAGTCATGTTCCCACCTGGGACAAGAGGCCGGGCCCGGGGACTGCCTTACACCATG
GACGCGTTCATGCTTGGCATGGGGATGCTGGGATATCCCAACTTCGTGGCGACCTATGGCCGTGGCTACCCCGGATTTGCTCCAAGCTAT
GGCTATCAGTTCCCAGGCTTCCCAGCAGCGGCTTATGGACCAGTGGCAGCAGCGGCGGTGGCGGCAGCAAGAGGATCAGGCTCCAACCCG
GCGCGGCCCGGAGGCTTCCCGGGGGCCAACAGCCCAGGACCTGTCGCCGATCTCTACGGCCCTGCCAGCCAGGACTCCGGAGTGGGGAAT
TACATAAGTGCGGCCAGCCCACAGCCGGGCTCGGGCTTCGGCCACGGCATAGCTGGACCTTTGATTGCAACGGCCTTTACAAATGGATAC
CATTGAGCAGGTGCTTTCGTTGCCATCTCACTCTGAGAGCATACCTGGATGTCCAGGCAAGACTGGGCGAAGTTTCTGAGTGGCCCTTTG
TTTAGGTGATGTCCTCAGACCTGGACCCCCACCAGCCTCACTCCCCATCCCAACCAGAGATGGCTCACTTCGGATCGAGGGTTGACTACA
TCTCATCATCTCACGAATCTGCTGTAATATAAGACAACAGCTTTTAAATGTGTATATAACCCATGATTTCGGTTTTGTTTTGTTTTGTTT
TTCTTGATGGTTTCCCTCTCCCTCCCTCTCTTCCCATTCTCCTTTTAAATCTCTTTGAATCACATTTGGTAGTGATTTTGACTTAGTCCA
GTAGTCACATAGCTTTAATATCTAGTTCAAAGCTAACCATAGTATAATTGTTATATTAAGGAGTTATTTTTTCTTAAAACATTTTTTTTT
GCTTGTTTTGGTTCTGTTCTCACTTTTAAAGGATGCTGAGATGGTAATATGACTCTCCATATTTTGGTACCAATTCTGAGACTGTATGAA
TTTTCAGGTGGAACTTTAGCACACACTGAAGCAAAGTTGTGAAGTGCAGGGCGGGAGGTGGGCGTGAGCTTTCTATTTTGCGTTGTAGAA
GAAGTGAGATGTAGTAAGCTAATTAACAGACTTTCTAGCAGTTCTTTTTGTGATGTCTCTTTGTTAATCTGAGTCTATCTATTTTCGGCA

>In-frame_KSR1_ENST00000509603_chr17_25783900_+_MSI2_ENST00000579180_chr17_55478740_+_1761nt
ATGGATAGAGCAGCGCTGCGCGCGGCGGCGATGGGAGAGAAGAAGGAGGGCGGTGGCGGGGGGGATGCGGCGGCCGCGGAGGGAGGCGCA
GGGGCCGCGGCCAGCCGGGCGCTGCAGCAGTGCGGGCAGCTCCAGAAGCTCATCGACATCTCCATCGGCAGCCTGCGCGGGCTGCGCACC
AAGTGCGCTGTGTCCAACGACCTCACCCAGCAGGAGATACGGACCCTGGAGATGGTCACAAGAACAAAGAAAATATTTGTAGGCGGGTTA
TCTGCGAACACAGTAGTGGAAGATGTAAAGCAATATTTCGAGCAGTTTGGCAAGGTGGAAGATGCAATGCTGATGTTTGATAAAACTACC
AACAGGCACAGAGGGTTTGGCTTTGTCACTTTTGAGAATGAAGATGTTGTGGAGAAAGTCTGTGAGATTCATTTCCATGAAATCAATAAT
AAAATGGTAGAATGTAAGAAAGCTCAGCCGAAAGAAGTCATGTTCCCACCTGGGACAAGAGGCCGGGCCCGGGGACTGCCTTACACCATG
GACGCGTTCATGCTTGGCATGGGGATGCTGGGATATCCCAACTTCGTGGCGACCTATGGCCGTGGCTACCCCGGATTTGCTCCAAGCTAT
GGCTATCAGTTCCCAGACTATTTGCCGGTTTCACAAGACATAATTTTTATCAACTAGCTCTTAAGAGAGGCATAGCAAAGTGGGGGTTGC
TACCATTTCTAGAGAGAGAGGACACAGTCCCGGCCTGGGCTGCCCCCGCTCCAGTCAATGCTCACTGAAAGTCTGTCTTAGCTGCCTGTT
TGAATGACTGTTCTTTTTCTCATTTTTAATTCTTGGACTCATGTCCTCATTGCTTCACTCAATTAAAAAAAAATTATTCTCCAGTCCCCT
CCCACTTTGCTTCTTGTATGCATTGTGACCGACCCCACTTCCTCAGAATGTAACGGGGCCAGAGGGAAACTTCTCACAAACTTCGTAGAG
CCTCCTCAGGGGAAGCTAGGAAGAAGACATCAAATGTTTTTAAGTCATGACCAAACAGGCTTGTTGGGGACATATCATGGGGTGAGCTTT
GAAGTGCTGGTGGTCCAGAGGGGTTGCAGATACGTGACTTGGAGCACCCGTGTCTTACGATGGACAGTGATAAAGGTGAACACACAGAGA
CAGACTATTCTCTAAGAATGTGAGAAACCTGATCTGGAAGAGGAGCTATATAAACACTATCTGACTATCTTTGTCTTTTGGGGCCAGTGG
CTGTTGGCATAATCACAAGCCTGTCTGTCTTCGAGAAGGGACAGTGGAGTCATCCAGGTGCTGCCACATGACAGGCACGGTGGGCACCGA
TCCACAGTGGGCCCCGCCTTCCCCAGCTCGCCTCCCTGCCTGTGCTGGCCTGGCCTTGCCTGCTGGCACCATTGGAGTAGGAGGGGGTGG
AACACAGGGGGCCCATCCTGATCAGGCCCCATCTCAAGGTTGGCACTCCTGCCCATCACCCTTAGAAGGATCTTTTCCCATGGCTTGACT
TCCTTCATTTCCCTAACTGAAATACACCCACTCTCTTGGAATAATGACGTACCACTCAGTTGGACCCTCAAGAGTCACTGCTTTGTCTGT
GCTGGTAGTTTGTGAGAAGTGACCCGCACGCTTCCATTTGATGCATTTGATGTGAGTGAATCCATACATTTGAATGTCATTGTCCTTGAG

>In-frame_KSR1_ENST00000319524_chr17_25783900_+_MSI2_ENST00000416426_chr17_55478740_+_1564nt
ATGGATAGAGCAGCGCTGCGCGCGGCGGCGATGGGAGAGAAGAAGGAGGGCGGTGGCGGGGGGGATGCGGCGGCCGCGGAGGGAGGCGCA
GGGGCCGCGGCCAGCCGGGCGCTGCAGCAGTGCGGGCAGCTCCAGAAGCTCATCGACATCTCCATCGGCAGCCTGCGCGGGCTGCGCACC
AAGTGCGCTGTGTCCAACGACCTCACCCAGCAGGAGATACGGACCCTGGAGATGGTCACAAGAACAAAGAAAATATTTGTAGGCGGGTTA
TCTGCGAACACAGTAGTGGAAGATGTAAAGCAATATTTCGAGCAGTTTGGCAAGGTGGAAGATGCAATGCTGATGTTTGATAAAACTACC
AACAGGCACAGAGGGTTTGGCTTTGTCACTTTTGAGAATGAAGATGTTGTGGAGAAAGTCTGTGAGATTCATTTCCATGAAATCAATAAT
AAAATGGTAGAATGTAAGAAAGCTCAGCCGAAAGAAGTCATGTTCCCACCTGGGACAAGAGGCCGGGCCCGGGGACTGCCTTACACCATG
GACGCGTTCATGCTTGGCATGGGGATGCTGGGATATCCCAACTTCGTGGCGACCTATGGCCGTGGCTACCCCGGATTTGCTCCAAGCTAT
GGCTATCAGTTCCCAGGCTTCCCAGCAGCGGCTTATGGACCAGTGGCAGCAGCGGCGGTGGCGGCAGCAAGAGGATCAGTCCTGAATAGC
TACAGTGCTCAACCGAATTTTGGCGCGCCCGCTTCCCCGGCAGGCTCCAACCCGGCGCGGCCCGGAGGCTTCCCGGGGGCCAACAGCCCA
GGACCTGTCGCCGATCTCTACGGCCCTGCCAGCCAGGACTCCGGAGTGGGGAATTACATAAGTGCGGCCAGCCCACAGCCGGGCTCGGGC
TTCGGCCACGGCATAGCTGGACCTTTGATTGCAACGGCCTTTACAAATGGATACCATTGAGCAGGTGCTTTCGTTGCCATCTCACTCTGA
GAGCATACCTGGATGTCCAGGCAAGACTGGGCGAAGTTTCTGAGTGGCCCTTTGTTTAGGTGATGTCCTCAGACCTGGACCCCCACCAGC
CTCACTCCCCATCCCAACCAGAGATGGCTCACTTCGGATCGAGGGTTGACTACATCTCATCATCTCACGAATCTGCTGTAATATAAGACA
ACAGCTTTTAAATGTGTATATAACCCATGATTTCGGTTTTGTTTTGTTTTGTTTTTCTTGATGGTTTCCCTCTCCCTCCCTCTCTTCCCA
TTCTCCTTTTAAATCTCTTTGAATCACATTTGGTAGTGATTTTGACTTAGTCCAGTAGTCACATAGCTTTAATATCTAGTTCAAAGCTAA
CCATAGTATAATTGTTATATTAAGGAGTTATTTTTTCTTAAAACATTTTTTTTTGCTTGTTTTGGTTCTGTTCTCACTTTTAAAGGATGC
TGAGATGGTAATATGACTCTCCATATTTTGGTACCAATTCTGAGACTGTATGAATTTTCAGGTGGAACTTTAGCACACACTGAAGCAAAG

>In-frame_KSR1_ENST00000319524_chr17_25783900_+_MSI2_ENST00000284073_chr17_55478740_+_6074nt
ATGGATAGAGCAGCGCTGCGCGCGGCGGCGATGGGAGAGAAGAAGGAGGGCGGTGGCGGGGGGGATGCGGCGGCCGCGGAGGGAGGCGCA
GGGGCCGCGGCCAGCCGGGCGCTGCAGCAGTGCGGGCAGCTCCAGAAGCTCATCGACATCTCCATCGGCAGCCTGCGCGGGCTGCGCACC
AAGTGCGCTGTGTCCAACGACCTCACCCAGCAGGAGATACGGACCCTGGAGATGGTCACAAGAACAAAGAAAATATTTGTAGGCGGGTTA
TCTGCGAACACAGTAGTGGAAGATGTAAAGCAATATTTCGAGCAGTTTGGCAAGGTGGAAGATGCAATGCTGATGTTTGATAAAACTACC
AACAGGCACAGAGGGTTTGGCTTTGTCACTTTTGAGAATGAAGATGTTGTGGAGAAAGTCTGTGAGATTCATTTCCATGAAATCAATAAT
AAAATGGTAGAATGTAAGAAAGCTCAGCCGAAAGAAGTCATGTTCCCACCTGGGACAAGAGGCCGGGCCCGGGGACTGCCTTACACCATG
GACGCGTTCATGCTTGGCATGGGGATGCTGGGATATCCCAACTTCGTGGCGACCTATGGCCGTGGCTACCCCGGATTTGCTCCAAGCTAT
GGCTATCAGTTCCCAGGCTTCCCAGCAGCGGCTTATGGACCAGTGGCAGCAGCGGCGGTGGCGGCAGCAAGAGGATCAGGCTCCAACCCG
GCGCGGCCCGGAGGCTTCCCGGGGGCCAACAGCCCAGGACCTGTCGCCGATCTCTACGGCCCTGCCAGCCAGGACTCCGGAGTGGGGAAT
TACATAAGTGCGGCCAGCCCACAGCCGGGCTCGGGCTTCGGCCACGGCATAGCTGGACCTTTGATTGCAACGGCCTTTACAAATGGATAC
CATTGAGCAGGTGCTTTCGTTGCCATCTCACTCTGAGAGCATACCTGGATGTCCAGGCAAGACTGGGCGAAGTTTCTGAGTGGCCCTTTG
TTTAGGTGATGTCCTCAGACCTGGACCCCCACCAGCCTCACTCCCCATCCCAACCAGAGATGGCTCACTTCGGATCGAGGGTTGACTACA
TCTCATCATCTCACGAATCTGCTGTAATATAAGACAACAGCTTTTAAATGTGTATATAACCCATGATTTCGGTTTTGTTTTGTTTTGTTT
TTCTTGATGGTTTCCCTCTCCCTCCCTCTCTTCCCATTCTCCTTTTAAATCTCTTTGAATCACATTTGGTAGTGATTTTGACTTAGTCCA
GTAGTCACATAGCTTTAATATCTAGTTCAAAGCTAACCATAGTATAATTGTTATATTAAGGAGTTATTTTTTCTTAAAACATTTTTTTTT
GCTTGTTTTGGTTCTGTTCTCACTTTTAAAGGATGCTGAGATGGTAATATGACTCTCCATATTTTGGTACCAATTCTGAGACTGTATGAA
TTTTCAGGTGGAACTTTAGCACACACTGAAGCAAAGTTGTGAAGTGCAGGGCGGGAGGTGGGCGTGAGCTTTCTATTTTGCGTTGTAGAA
GAAGTGAGATGTAGTAAGCTAATTAACAGACTTTCTAGCAGTTCTTTTTGTGATGTCTCTTTGTTAATCTGAGTCTATCTATTTTCGGCA
ATAAGGTAAGGACGACAGTGTTTTGAGTGTCCTCCTTTTCTATAAGTGCTTTTTTTCTGTTGAAAGAGGTGATATTATAAGGTTTTTTGA
AATTGTGAATTCTAAAAAAGAAATGTTGTAAATACAATTCCATTAACTACATAGAAACTATTAAGAAAGAGAGAATCAAAAATATTTTTG
TGAGGGAGTCGGTCCCAGGCAGTTTGATGCTCTGTGGAAGGAGGCGGGAAGGGAACGTTGGCCAAGTCAGTTACTGAGATGAAGATCGCC
CAGCTGCCAGGACCACCCCAGGACAAGTTAGAGCACTGTTTAGCTCCTTTGTCTGTGTGATAGACCTAAGAACTGTATTAGTGTTGTACC
AGCCTATTAACCTCTTGTCTGTGCACAGCTTCAAATGTTACCGTCTAGTTAGATTTTTATTTAAAATATGAAAAACTGCTTTTCCCAAGA
TGTTTTTTAAAAACAAAGCTACAATTTTAATATTTAACATATTTAAAGTTTCAAAGCACACCTGTTTGGCTTGGGTGGGGGTGGGGTGGG
GGGGACATTCTTTTTCAGTCTTAATTTTTAAATATTTGATCATTTTCTATTGTCCAATCATTTCAGCACCTCCAAAGGTCCCTAGGACAC
TTTGCCTCTCTTCTCCCCCTGCCCCCCACCCTGCTCCCACATCTGGGGGCCCATGGGCCAGGAGTGGATAAGCCTGCATTAATACAACCT
TTCTCCATTCACTTTCTATTTACAAATTAGGAAAGCAACCTTTTGGTTTATATATATTTTTTTTAATACCTCAGTGCTGCAAGTATCACC
AGAGAGGCTATGGAAGAATTTTTTTTTAATTTATTGTAGATGTAAACAGAATTTTAAAAATAAAAAGTATAAACATCACTGCACTGTGAC
TGGTGGGAAAAACTGACAGTTTCCTCTTTGCACATGTTTAACATTTGGCTGTTATAATATATGGTCCTCGGTTGGGGAAAGATACTTATG
ATGAAGGATATTTTTTAATTTAACTTTTTTTTAAATATTGGTAATAGGTCGGCAACAGCAACTATAGAAGTACAACTCAATAGATGGCAT
TAAAACATATTGTAGTGTGGATATATATTTTTTCTTTTTTAAAATGTGATATTGACGTTTTATTAATATTTTTTAAATTGTTACGTTTAT
AAATTTGGTACTTAAGGCACAGCCAGTATGAGACACTGAATGCGACATTTATTATAAAGAGCTGCTGCACTCCTATTTTTATAAATTTTA
CTAACAAAGTAGACTAATGTAGACATTCACAGACATGGTAGGGCAAAAGCATCTTCAAACTAAAGACTCCAAAATGCTAACTCAGAAAGA
AAGAAAAAACCCGTTTTCAATTCTAATGAAACAGCAACAACATTTTTTTTAATTAAAAAAAAAATCATGTTCTTTGTTTTTCTAATAAAA
TGTTAGGTTGTTTGGTGAGGTTTTTTTGTTGTTTTTTTCCTTTCTTTGTTTCTTTTCTTTTCCCCCAAACAACCAGATTAAATGCTGAGC
GCTTTTAAAATATCAAAACTTGTTCAAGTCATAAAACAACAAAACATAAGTTTTATTTAAAAAAAAAAAAAGAAAGAAAAAATAGTAAAT
TCCCAGAAATTCAGTGTTTAGACGAGGGAATTTAATTCCTATTTTGTCCATGTTGGTGATGTACTGTACTTCCCTTCCTTTTCTCTGCAT
CCCCCATCACCTCATAGAAGACTCTTTGTTGATCATTGTATGTTAATAATGTATAAAATGGCTATCTTGTAAGCGTGCTGTCCTGGTACT
AGTGTAGCGACTTTTTTTCTCCTCTTTCTTCTAGTACATATTGATAGGTATAACATAATTAAGGTTTAAAAAAAATTAGACATAGTTATT
CAGATTTAGGACCAGTAAGGATAGAACTTTCTCTTATTTATGAAAAAAAATGCTAATAATTTTGGGGCAGTTTTTTCCTTTAATTATTTT
TTTCAATTTCAAGTTTAATTTTATTTTAGCTGATCTGATGTGGTTTCAACTAACCCAAGGTCTCACCATGTTAAAATGCCGGCGGACTCT
ACGGCGTTTTGTAGATCCCCCCCCCCCCACCCACTGTGAAGGGGTGCCATACTACCTTAAATGCTAATGCTAGATATGCAAAACTGGATT
TTTTTAATTTATTTTTTAAAAGAGGGAGGCATGGTATATTAAAATGATTTTACTAAGAGAAAAAATATTTTTTTAAGAATGCTCAGAAGA
AATTGATAATCTGTGTGAATATGTTTTAGATGTTTATATACCTTTTGAAGAGACCCAGTAGCCCATAGCACAAATCTTGTGGAAATCCGA
TATGTTTTAATGTGGCTACCTAGGTTTAAGGTTCACGTTAGTCCCCCCATTCCATCTAGAAGTCCATTTTGAAAGATTTTTGTAAATTCT
TTTAACACTGATGTTTCAGCCTCGTCTTTGTTTCAGTTAAGCTCAATGGCGAACATGGGAACCACCTTTCGCCTTCCCTGGGGGAGAAAC
CCTCTTGGCTGATGGCTTTTCCCCGGAATTATCAAACAGCCACCGGGTGACTTTCTGGCTTCCAGATCCATCTGCCTGAGACCCCCGAAC
TCCTCTCCTCCCAAGCAGAGGCGAGTGAGTGGCATTAGCTCCCGGACCCATTCCCGGTCCTAGCTGGGCATGGGGCTGACGGAGATGACC
AAGCCTTGGTCTGCTCTCTAGCAGCTTCCACAGACTTGGCTCGTGGCCTTCCTTATATCCACTGGGAACAAACAGCCTCGCGCTCTATAC
CAAACAGCCTCGCGCTCTATCCCAGTCGCCCATTAGCTTGATTCAAACAAAGCCCCAGCAGGCCTTTGCGTTTTTATCCTTCATAACCTT
CATCTTAATTTGAACTTGTAGCTTGGACTTTAAGGTAGCATGGCTCTATTGCTGTCAATTTACTGTTTCACTGCACAGCAATCACAGCCA
GTGAATGTTACACACATCTTGCTAGACTAGTATAAAAATCATTGGGTAATTGTTGGTTCTAATGACCTGAAAGGTGTTCAGTTTTTGTTC
TTGGTTTTGTTTTGTTTTTGATTTCTTGGGGGTGGGTTTTGCTTGTTGTTCCTTTTCATTTGGGGGTTTTTGGGGAAAAAATTTATTTTT
GGTTCCAAATAGAAAAACAAAACCTATTTTGATCTTTAGTGCAAACGAGGGCTAGGGACTTAGCCTCCTCCACCACCTCCACACTGCTTC
ATTCTGCCATTCACTCACTGCAGCATATTCAAGAATAAAGCAATATCGTTTACTACATTTTTTATTGAAGGTCAGCCATGCTTTCTGTAT
TATATTGCATATGAAATTGTTTACAAAAGAAACACTAACTCATACTTCTCTTTATTGGTTGCAAGTGGCACGCAGGAACAGAGGGAGAGT
GGGGGGCTGGTGGGGGAGGGGAGATTTTTTTTTTTTTTTCTTGAATGTGCTTCGCAAGCCAGGCTATCTTCCAAGGAAGGCAGACAGTGG
GAGAGCAGAGGGACTGACTGCAGGCAAGCACATTGAAGAAAGACACTGGCGGGTTTCCCCACCCTCACCCCAAAGCAGAAAACTAGCAGA
CGTCAGCTCAGCCCCGTCCTGGGCACAGACACTACACAAGGAGACGCTGGAAGTTAAGCAATACTTTAATACTGTAATATGTTTGTTTTC
TTTTTCTTTCTTTTTTTTCTACCAAAAAAAAGTAAGTAAACTAAAACACAAAAACATATAAATAAAATCCATCCCTCTTGTCGGGGACCT
GCAGGGGGGCAACCTTAATCCAAACACCTGGCTATCAAATAATCAGAATGTATTGTCTCAGACAGGATTTCAGTTCCGGGAGGCAGGGGC
ATGATGGGGGAGGGGGCCGGAGGCTGAGAGACAAAAGTTCCAGAGCCTCCCTCGAAGGTTCTCTACTACTGTATTCTGTACATAATGTAC
CATCCCATGTGGAATCTGTGAGTGTCCTCTTAAGTAGCGTGGGCTAGCCAATCTGCCGTTCATGGTGTATTGTAAACTCCGAATTCCATA
TGTAATAGGATGCAAGTCTAAGCGTTTCATGTGGACATAAATGTATCTAAATAAAACTTTCCCTAGCACTGTGGCTGACCTCACCCTTAC
TTTTATACTTTAGTATGAAACTGATGAGAACTTTGGTAGTGAGTATTTTTTTTATATATATACATATATATGTACTATCTATATATATAT
CTCAAGCATCTTTCAGGTCTTTGTGTGTGGCTTTCTTAAAGCCCTGTTGTAAAAAATTACTATGTGGATGGCAGTCTCTCACATCACAGA
TGTGGAAAGTATAATTTTATATTTGTATTTTCAAATAAATAAGTTTGTGAAAGGTTTCCATCCTCTACTGTGGTCCAGAAATCAATGTGT

>In-frame_KSR1_ENST00000319524_chr17_25783900_+_MSI2_ENST00000322684_chr17_55478740_+_1756nt
ATGGATAGAGCAGCGCTGCGCGCGGCGGCGATGGGAGAGAAGAAGGAGGGCGGTGGCGGGGGGGATGCGGCGGCCGCGGAGGGAGGCGCA
GGGGCCGCGGCCAGCCGGGCGCTGCAGCAGTGCGGGCAGCTCCAGAAGCTCATCGACATCTCCATCGGCAGCCTGCGCGGGCTGCGCACC
AAGTGCGCTGTGTCCAACGACCTCACCCAGCAGGAGATACGGACCCTGGAGATGGTCACAAGAACAAAGAAAATATTTGTAGGCGGGTTA
TCTGCGAACACAGTAGTGGAAGATGTAAAGCAATATTTCGAGCAGTTTGGCAAGGTGGAAGATGCAATGCTGATGTTTGATAAAACTACC
AACAGGCACAGAGGGTTTGGCTTTGTCACTTTTGAGAATGAAGATGTTGTGGAGAAAGTCTGTGAGATTCATTTCCATGAAATCAATAAT
AAAATGGTAGAATGTAAGAAAGCTCAGCCGAAAGAAGTCATGTTCCCACCTGGGACAAGAGGCCGGGCCCGGGGACTGCCTTACACCATG
GACGCGTTCATGCTTGGCATGGGGATGCTGGGATATCCCAACTTCGTGGCGACCTATGGCCGTGGCTACCCCGGATTTGCTCCAAGCTAT
GGCTATCAGTTCCCAGACTATTTGCCGGTTTCACAAGACATAATTTTTATCAACTAGCTCTTAAGAGAGGCATAGCAAAGTGGGGGTTGC
TACCATTTCTAGAGAGAGAGGACACAGTCCCGGCCTGGGCTGCCCCCGCTCCAGTCAATGCTCACTGAAAGTCTGTCTTAGCTGCCTGTT
TGAATGACTGTTCTTTTTCTCATTTTTAATTCTTGGACTCATGTCCTCATTGCTTCACTCAATTAAAAAAAAATTATTCTCCAGTCCCCT
CCCACTTTGCTTCTTGTATGCATTGTGACCGACCCCACTTCCTCAGAATGTAACGGGGCCAGAGGGAAACTTCTCACAAACTTCGTAGAG
CCTCCTCAGGGGAAGCTAGGAAGAAGACATCAAATGTTTTTAAGTCATGACCAAACAGGCTTGTTGGGGACATATCATGGGGTGAGCTTT
GAAGTGCTGGTGGTCCAGAGGGGTTGCAGATACGTGACTTGGAGCACCCGTGTCTTACGATGGACAGTGATAAAGGTGAACACACAGAGA
CAGACTATTCTCTAAGAATGTGAGAAACCTGATCTGGAAGAGGAGCTATATAAACACTATCTGACTATCTTTGTCTTTTGGGGCCAGTGG
CTGTTGGCATAATCACAAGCCTGTCTGTCTTCGAGAAGGGACAGTGGAGTCATCCAGGTGCTGCCACATGACAGGCACGGTGGGCACCGA
TCCACAGTGGGCCCCGCCTTCCCCAGCTCGCCTCCCTGCCTGTGCTGGCCTGGCCTTGCCTGCTGGCACCATTGGAGTAGGAGGGGGTGG
AACACAGGGGGCCCATCCTGATCAGGCCCCATCTCAAGGTTGGCACTCCTGCCCATCACCCTTAGAAGGATCTTTTCCCATGGCTTGACT
TCCTTCATTTCCCTAACTGAAATACACCCACTCTCTTGGAATAATGACGTACCACTCAGTTGGACCCTCAAGAGTCACTGCTTTGTCTGT
GCTGGTAGTTTGTGAGAAGTGACCCGCACGCTTCCATTTGATGCATTTGATGTGAGTGAATCCATACATTTGAATGTCATTGTCCTTGAG

>In-frame_KSR1_ENST00000319524_chr17_25783900_+_MSI2_ENST00000442934_chr17_55478740_+_1686nt
ATGGATAGAGCAGCGCTGCGCGCGGCGGCGATGGGAGAGAAGAAGGAGGGCGGTGGCGGGGGGGATGCGGCGGCCGCGGAGGGAGGCGCA
GGGGCCGCGGCCAGCCGGGCGCTGCAGCAGTGCGGGCAGCTCCAGAAGCTCATCGACATCTCCATCGGCAGCCTGCGCGGGCTGCGCACC
AAGTGCGCTGTGTCCAACGACCTCACCCAGCAGGAGATACGGACCCTGGAGATGGTCACAAGAACAAAGAAAATATTTGTAGGCGGGTTA
TCTGCGAACACAGTAGTGGAAGATGTAAAGCAATATTTCGAGCAGTTTGGCAAGGTGGAAGATGCAATGCTGATGTTTGATAAAACTACC
AACAGGCACAGAGGGTTTGGCTTTGTCACTTTTGAGAATGAAGATGTTGTGGAGAAAGTCTGTGAGATTCATTTCCATGAAATCAATAAT
AAAATGGTAGAATGTAAGAAAGCTCAGCCGAAAGAAGTCATGTTCCCACCTGGGACAAGAGGCCGGGCCCGGGGACTGCCTTACACCATG
GACGCGTTCATGCTTGGCATGGGGATGCTGGGATATCCCAACTTCGTGGCGACCTATGGCCGTGGCTACCCCGGATTTGCTCCAAGCTAT
GGCTATCAGTTCCCAGGCTTCCCAGCAGCGGCTTATGGACCAGTGGCAGCAGCGGCGGTGGCGGCAGCAAGAGGATCAGGCTCCAACCCG
GCGCGGCCCGGAGGCTTCCCGGGGGCCAACAGCCCAGGACCTGTCGCCGATCTCTACGGCCCTGCCAGCCAGGACTCCGGAGTGGGGAAT
TACATAAGTGCGGCCAGCCCACAGCCGGGCTCGGGCTTCGGCCACGGCATAGCTGGACCTTTGATTGCAACGGCCTTTACAAATGGATAC
CATTGAGCAGGTGCTTTCGTTGCCATCTCACTCTGAGAGCATACCTGGATGTCCAGGCAAGACTGGGCGAAGTTTCTGAGTGGCCCTTTG
TTTAGGTGATGTCCTCAGACCTGGACCCCCACCAGCCTCACTCCCCATCCCAACCAGAGATGGCTCACTTCGGATCGAGGGTTGACTACA
TCTCATCATCTCACGAATCTGCTGTAATATAAGACAACAGCTTTTAAATGTGTATATAACCCATGATTTCGGTTTTGTTTTGTTTTGTTT
TTCTTGATGGTTTCCCTCTCCCTCCCTCTCTTCCCATTCTCCTTTTAAATCTCTTTGAATCACATTTGGTAGTGATTTTGACTTAGTCCA
GTAGTCACATAGCTTTAATATCTAGTTCAAAGCTAACCATAGTATAATTGTTATATTAAGGAGTTATTTTTTCTTAAAACATTTTTTTTT
GCTTGTTTTGGTTCTGTTCTCACTTTTAAAGGATGCTGAGATGGTAATATGACTCTCCATATTTTGGTACCAATTCTGAGACTGTATGAA
TTTTCAGGTGGAACTTTAGCACACACTGAAGCAAAGTTGTGAAGTGCAGGGCGGGAGGTGGGCGTGAGCTTTCTATTTTGCGTTGTAGAA
GAAGTGAGATGTAGTAAGCTAATTAACAGACTTTCTAGCAGTTCTTTTTGTGATGTCTCTTTGTTAATCTGAGTCTATCTATTTTCGGCA

>In-frame_KSR1_ENST00000319524_chr17_25783900_+_MSI2_ENST00000579180_chr17_55478740_+_1761nt
ATGGATAGAGCAGCGCTGCGCGCGGCGGCGATGGGAGAGAAGAAGGAGGGCGGTGGCGGGGGGGATGCGGCGGCCGCGGAGGGAGGCGCA
GGGGCCGCGGCCAGCCGGGCGCTGCAGCAGTGCGGGCAGCTCCAGAAGCTCATCGACATCTCCATCGGCAGCCTGCGCGGGCTGCGCACC
AAGTGCGCTGTGTCCAACGACCTCACCCAGCAGGAGATACGGACCCTGGAGATGGTCACAAGAACAAAGAAAATATTTGTAGGCGGGTTA
TCTGCGAACACAGTAGTGGAAGATGTAAAGCAATATTTCGAGCAGTTTGGCAAGGTGGAAGATGCAATGCTGATGTTTGATAAAACTACC
AACAGGCACAGAGGGTTTGGCTTTGTCACTTTTGAGAATGAAGATGTTGTGGAGAAAGTCTGTGAGATTCATTTCCATGAAATCAATAAT
AAAATGGTAGAATGTAAGAAAGCTCAGCCGAAAGAAGTCATGTTCCCACCTGGGACAAGAGGCCGGGCCCGGGGACTGCCTTACACCATG
GACGCGTTCATGCTTGGCATGGGGATGCTGGGATATCCCAACTTCGTGGCGACCTATGGCCGTGGCTACCCCGGATTTGCTCCAAGCTAT
GGCTATCAGTTCCCAGACTATTTGCCGGTTTCACAAGACATAATTTTTATCAACTAGCTCTTAAGAGAGGCATAGCAAAGTGGGGGTTGC
TACCATTTCTAGAGAGAGAGGACACAGTCCCGGCCTGGGCTGCCCCCGCTCCAGTCAATGCTCACTGAAAGTCTGTCTTAGCTGCCTGTT
TGAATGACTGTTCTTTTTCTCATTTTTAATTCTTGGACTCATGTCCTCATTGCTTCACTCAATTAAAAAAAAATTATTCTCCAGTCCCCT
CCCACTTTGCTTCTTGTATGCATTGTGACCGACCCCACTTCCTCAGAATGTAACGGGGCCAGAGGGAAACTTCTCACAAACTTCGTAGAG
CCTCCTCAGGGGAAGCTAGGAAGAAGACATCAAATGTTTTTAAGTCATGACCAAACAGGCTTGTTGGGGACATATCATGGGGTGAGCTTT
GAAGTGCTGGTGGTCCAGAGGGGTTGCAGATACGTGACTTGGAGCACCCGTGTCTTACGATGGACAGTGATAAAGGTGAACACACAGAGA
CAGACTATTCTCTAAGAATGTGAGAAACCTGATCTGGAAGAGGAGCTATATAAACACTATCTGACTATCTTTGTCTTTTGGGGCCAGTGG
CTGTTGGCATAATCACAAGCCTGTCTGTCTTCGAGAAGGGACAGTGGAGTCATCCAGGTGCTGCCACATGACAGGCACGGTGGGCACCGA
TCCACAGTGGGCCCCGCCTTCCCCAGCTCGCCTCCCTGCCTGTGCTGGCCTGGCCTTGCCTGCTGGCACCATTGGAGTAGGAGGGGGTGG
AACACAGGGGGCCCATCCTGATCAGGCCCCATCTCAAGGTTGGCACTCCTGCCCATCACCCTTAGAAGGATCTTTTCCCATGGCTTGACT
TCCTTCATTTCCCTAACTGAAATACACCCACTCTCTTGGAATAATGACGTACCACTCAGTTGGACCCTCAAGAGTCACTGCTTTGTCTGT
GCTGGTAGTTTGTGAGAAGTGACCCGCACGCTTCCATTTGATGCATTTGATGTGAGTGAATCCATACATTTGAATGTCATTGTCCTTGAG


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FusionGenePPI for KSR1_MSI2


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page

.

check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors
KSR1MAP2K1, BRAF, BRAP, KSR1, MARK3, RAF1, LSP1, HSP90AA1, YWHAE, YWHAB, SDF4, SKAP1, PRMT2, XPO1, VPRBP, NF2, PJA2, KCTD3, KIF13B, ZBTB21, GIGYF1, CGN, LRFN1, DENND1A, SH3PXD2A, RTKN, DENND4C, MAST3, SRGAP2, EIF4E2, SIPA1L1, PPM1H, LPIN3, LIMA1, MAGI1, TESK2, DCLK1, ZNF638, MAPKAP1, NF1, HDAC4, CBY1, SH3RF3, SRSF12, CDC25C, SYDE1, AGAP1, NADK, GIGYF2, CDC25B, CDK16, TANC2, CAMSAP2, PTPN13, RALGPS2, FAM110B, USP21, KIAA1804, RASAL2, TIAM1, ANKRD34A, FAM53C, PHLDB2, RPTOR, PLEKHA7, OSBPL6, KIF1C, MELK, NAV1, DENND4A, FAM110A, GAB2, STARD13, PTPN14, DEPDC1B, HDAC7, CWC25, INPP5E, LARP1, RAB11FIP2, PLEKHA5, MTFR1L, MLLT4, CHEK1, KIF1B, CSNK1A1, TBC1D25, EDC3, HDAC5, TBC1D1, DACT3, PANK2, REEP3, CRTC2, CRTC3, MICALL1, SH3BP4, BAIAP2, FGD6MSI2GRB2, H2AFX, CUL3, VCAM1, SOX2, TARDBP, RPA3, RPA2, RPA1, HNRNPH2, MEOX2, SUZ12, RNF2, BMI1, MRPL4, ICK, ANXA13, TIMM10B, RBFOX2, FKBP1A, CRIP1, CTSB, EIF3G, HNRNPA1, PABPC1, PABPC4, PIN1, STIP1, UFM1, WDR1, RAB7A, UBE2L3, NTRK1, CDK1, KIF21A, RHOBTB2, MDM2, TP53, ANKRD40, LOXL3, G3BP1, RNF157


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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RelatedDrugs for KSR1_MSI2


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.0 2018-04-02)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for KSR1_MSI2


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource