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Fusion gene ID: 19250 |
FusionGeneSummary for KRT19_COL5A1 |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: KRT19_COL5A1 | Fusion gene ID: 19250 | Hgene | Tgene | Gene symbol | KRT19 | COL5A1 | Gene ID | 3880 | 1289 |
| Gene name | keratin 19 | collagen type V alpha 1 chain | |
| Synonyms | CK19|K19|K1CS | EDSC|EDSCL1 | |
| Cytomap | 17q21.2 | 9q34.3 | |
| Type of gene | protein-coding | protein-coding | |
| Description | keratin, type I cytoskeletal 1940-kDa keratin intermediate filamentCK-19cytokeratin 19keratin 19, type Ikeratin, type I, 40-kd | collagen alpha-1(V) chaincollagen, type V, alpha 1 | |
| Modification date | 20180522 | 20180523 | |
| UniProtAcc | P08727 | P20908 | |
| Ensembl transtripts involved in fusion gene | ENST00000361566, | ENST00000371817, ENST00000464187, | |
| Fusion gene scores | * DoF score | 13 X 5 X 9=585 | 10 X 9 X 7=630 |
| # samples | 14 | 11 | |
| ** MAII score | log2(14/585*10)=-2.0630097975258 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(11/630*10)=-2.51784830486262 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
| Context | PubMed: KRT19 [Title/Abstract] AND COL5A1 [Title/Abstract] AND fusion [Title/Abstract] | ||
| Functional or gene categories assigned by FusionGDB annotation | |||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Hgene | KRT19 | GO:0045214 | sarcomere organization | 16000376 |
| Tgene | COL5A1 | GO:1903225 | negative regulation of endodermal cell differentiation | 23154389 |
| Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| TCGA | RV | BRCA | TCGA-JL-A3YX-01A | KRT19 | chr17 | 39679869 | - | COL5A1 | chr9 | 137533620 | + |
| * LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
| Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| In-frame | ENST00000361566 | ENST00000371817 | KRT19 | chr17 | 39679869 | - | COL5A1 | chr9 | 137533620 | + |
| 5CDS-intron | ENST00000361566 | ENST00000464187 | KRT19 | chr17 | 39679869 | - | COL5A1 | chr9 | 137533620 | + |
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FusionProtFeatures for KRT19_COL5A1 |
| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| KRT19 | COL5A1 |
| Type V collagen is a member of group I collagen(fibrillar forming collagen). It is a minor connective tissuecomponent of nearly ubiquitous distribution. Type V collagen bindsto DNA, heparan sulfate, thrombospondin, heparin, and insulin. |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
| - In-frame and retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | KRT19 | chr17:39679869 | chr9:137533620 | ENST00000361566 | - | 6 | 6 | 80_391 | 443 | 401 | Domain | IF rod |
| Hgene | KRT19 | chr17:39679869 | chr9:137533620 | ENST00000361566 | - | 6 | 6 | 116_133 | 443 | 401 | Region | Note=Linker 1 |
| Hgene | KRT19 | chr17:39679869 | chr9:137533620 | ENST00000361566 | - | 6 | 6 | 134_225 | 443 | 401 | Region | Note=Coil 1B |
| Hgene | KRT19 | chr17:39679869 | chr9:137533620 | ENST00000361566 | - | 6 | 6 | 1_79 | 443 | 401 | Region | Note=Head |
| Hgene | KRT19 | chr17:39679869 | chr9:137533620 | ENST00000361566 | - | 6 | 6 | 226_248 | 443 | 401 | Region | Note=Linker 12 |
| Hgene | KRT19 | chr17:39679869 | chr9:137533620 | ENST00000361566 | - | 6 | 6 | 249_387 | 443 | 401 | Region | Note=Coil 2 |
| Hgene | KRT19 | chr17:39679869 | chr9:137533620 | ENST00000361566 | - | 6 | 6 | 388_400 | 443 | 401 | Region | Note=Rod-like helical tail |
| Hgene | KRT19 | chr17:39679869 | chr9:137533620 | ENST00000361566 | - | 6 | 6 | 80_115 | 443 | 401 | Region | Note=Coil 1A |
| Tgene | >COL5A1 | chr17:39679869 | chr9:137533620 | ENST00000371817 | + | -1 | 66 | 1609_1837 | 36 | 1839 | Domain | Fibrillar collagen NC1 |
| Tgene | >COL5A1 | chr17:39679869 | chr9:137533620 | ENST00000371817 | + | -1 | 66 | 72_244 | 36 | 1839 | Domain | Note=Laminin G-like |
| Tgene | >COL5A1 | chr17:39679869 | chr9:137533620 | ENST00000371817 | + | -1 | 66 | 1571_1605 | 36 | 1839 | Region | Note=Nonhelical region |
| Tgene | >COL5A1 | chr17:39679869 | chr9:137533620 | ENST00000371817 | + | -1 | 66 | 231_443 | 36 | 1839 | Region | Note=Nonhelical region |
| Tgene | >COL5A1 | chr17:39679869 | chr9:137533620 | ENST00000371817 | + | -1 | 66 | 444_558 | 36 | 1839 | Region | Note=Interrupted collagenous region |
| Tgene | >COL5A1 | chr17:39679869 | chr9:137533620 | ENST00000371817 | + | -1 | 66 | 559_1570 | 36 | 1839 | Region | Note=Triple-helical region |
| - In-frame and not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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FusionGeneSequence for KRT19_COL5A1 |
| For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
| * Fusion amino acid sequences. |
| >In-frame_KRT19_ENST00000361566_chr17_39679869_-_COL5A1_ENST00000371817_chr9_137533620_+_1977aa GKKCSAPKARSALSVPAAGAGPHSSGAPTGSGSRGGGGEEEARRSWRRRRRRRGRASPAGSRPPRGPKSSPPARGRARQPPLPEQPPPQR RTGGAEVPMTSXSGAVPAECAARAVTRAPVRPRAPPSAPVRPGPRPAGMDVHTRWKARSALRPGAPLLPPLLLLLLWAPPPSRAAQPADL LKVLDFHNLPDGITKTTGFCATRRSSKGPDVAYRVTKDAQLSAPTKQLYPASAFPEDFSILTTVKAKKGSQAFLVSIYNEQGIQQIGLEL GRSPVFLYEDHTGKPGPEDYPLFRGINLSDGKWHRIALSVHKKNVTLILDCKKKTTKFLDRSDHPMIDINGIIVFGTRILDEEVFEGDIQ QLLFVSDHRAAYDYCEHYSPDCDTAVPDTPQSQDPNPDEYYTEGDGEGETYYYEYPYYEDPEDLGKEPTPSKKPVEAAKETTEVPEELTP TPTEAAPMPETSEGAGKEEDVGIGDYDYVPSEDYYTPSPYDDLTYGEGEENPDQPTDPGAGAEIPTSTADTSNSSNPAPPPGEGADDLEG EFTEETIRNLDENYYDPYYDPTSSPSEIGPGMPANQDTIYEGIGGPRGEKGQKGEPAIIEPGMLIEGPPGPEGPAGLPGPPGTMGPTGQV GDPGERGPPGRPGLPGADGLPGPPGTMLMLPFRFGGGGDAGSKGPMVSAQESQAQAILQQARLALRGPAGPMGLTGRPGPVGPPGSGGLK GEPGDVGPQGPRGVQGPPGPAGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLAGLPGEKGHRGDPGPSGPPGPPGDDGERGDDGEVGPR GLPGEPGPRGLLGPKGPPGPPGPPGVTGMDGQPGPKGNVGPQGEPGPPGQQGNPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGADGPP GHPGKEGPPGEKGGQGPPGPQGPIGYPGPRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGRGGPN GDPGPLGPPGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGPKGNSGGDGPA GPPGERGPNGPQGPTGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGERGHPGPPGPPGEQGLPGLA GKEGTKGDPGPAGLPGKDGPPGLRGFPGDRGLPGPVGALGLKGNEGPPGPPGPAGSPGERGPAGAAGPIGIPGRPGPQGPPGPAGEKGAP GEKGPQGPAGRDGLQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGDKGEQGPPGPTGPQGPIGQPGPSGADGEPGPRGQQGLFGQK GDEGPRGFPGPPGPVGLQGLPGPPGEKGETGDVGQMGPPGPPGPRGPSGAPGADGPQGPPGGIGNPGAVGEKGEPGEAGEPGLPGEGGPP GPKGERGEKGESGPSGAAGPPGPKGPPGDDGPKGSPGPVGFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPGPSGPPGKR GPPGPAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLPGSPGPDGPPGPMGPPGLPGLKGDSGPKGEK GHPGLIGLIGPPGEQGEKGDRGLPGPQGSSGPKGEQGITGPSGPIGPPGPPGLPGPPGPKGAKGSSGPTGPKGEAGHPGPPGPPGPPGEV IQPLPIQASRTRRNIDASQLLDDGNGENYVDYADGMEEIFGSLNSLKLEIEQMKRPLGTQQNPARTCKDLQLCHPDFPDGEYWVDPNQGC SRDSFKVYCNFTAGGSTCVFPDKKSEGARITSWPKENPGSWFSEFKRGKLLSYVDAEGNPVGVVQMTFLRLLSASAHQNVTYHCYQSVAW |
| * Fusion transcript sequences (only coding sequence (CDS) region). |
| >In-frame_KRT19_ENST00000361566_chr17_39679869_-_COL5A1_ENST00000371817_chr9_137533620_+_5931nt GGAAAAAAGTGCTCCGCGCCGAAGGCGAGGTCCGCACTCTCCGTCCCCGCGGCTGGCGCAGGACCTCACTCGAGCGGAGCGCCCACGGGG AGCGGGTCGCGGGGCGGCGGCGGCGAGGAGGAGGCGAGAAGGAGTTGGAGGAGGAGGAGGAGGAGGCGAGGGCGAGCTAGCCCAGCGGGG TCCCGGCCGCCCCGCGGGCCAAAGTCGAGCCCTCCCGCCCGTGGGCGAGCGCGCCAGCCGCCCCTTCCAGAACAGCCGCCGCCACAAAGA AGAACGGGGGGTGCCGAGGTCCCCATGACCTCCTAAAGTGGTGCGGTCCCTGCTGAGTGCGCTGCCCGGGCCGTGACCCGCGCCCCTGTG CGTCCCCGCGCGCCTCCGAGCGCCCCTGTGCGCCCCGGCCCGCGCCCCGCCGGCATGGACGTCCATACCCGCTGGAAAGCGCGCAGCGCG CTCCGCCCGGGCGCCCCGCTGCTGCCCCCGCTGCTGCTGCTGCTGCTGTGGGCGCCGCCTCCGAGCCGCGCAGCTCAGCCAGCAGATCTC CTGAAGGTTCTAGATTTTCACAACTTGCCTGATGGAATAACAAAGACAACAGGCTTTTGCGCCACGCGGCGATCTTCCAAAGGCCCGGAT GTCGCTTACAGAGTCACCAAAGACGCGCAGCTCAGCGCACCCACCAAGCAGCTGTACCCTGCGTCTGCATTTCCCGAGGACTTCTCCATC CTAACAACTGTGAAAGCCAAGAAAGGCAGCCAGGCCTTCCTGGTCTCCATCTACAACGAGCAGGGTATCCAGCAGATTGGGCTGGAGCTG GGCCGCTCTCCCGTCTTCCTCTACGAGGACCACACGGGGAAGCCTGGCCCGGAAGACTACCCCCTCTTCCGGGGCATCAACCTGTCAGAT GGCAAGTGGCACAGAATTGCTCTCAGCGTCCACAAGAAAAATGTCACCTTGATCCTCGACTGTAAAAAGAAGACCACCAAATTCCTCGAC CGCAGCGACCACCCCATGATCGACATCAATGGCATCATCGTGTTTGGCACCCGGATCCTGGATGAGGAGGTGTTTGAGGGTGACATCCAG CAGCTGCTCTTTGTCTCGGACCACCGGGCAGCTTATGATTACTGTGAGCACTACAGCCCTGACTGTGACACCGCAGTACCTGACACCCCA CAGTCGCAGGACCCCAATCCAGATGAATATTACACGGAAGGAGACGGCGAGGGTGAGACCTATTACTACGAATACCCCTACTACGAAGAC CCCGAAGACCTAGGGAAGGAGCCCACCCCCAGCAAGAAGCCCGTGGAAGCTGCCAAAGAAACCACAGAGGTCCCCGAGGAGCTGACCCCG ACCCCCACGGAAGCTGCTCCCATGCCTGAAACCAGTGAAGGGGCTGGGAAGGAAGAGGACGTCGGCATCGGGGACTATGACTACGTGCCC AGTGAGGACTACTACACGCCCTCACCGTATGATGACCTCACCTATGGCGAGGGGGAGGAGAACCCCGACCAGCCCACAGACCCAGGCGCT GGGGCCGAAATTCCCACCAGCACCGCCGACACCTCCAACTCCTCCAATCCAGCTCCGCCTCCAGGGGAAGGTGCGGATGACTTGGAGGGG GAGTTCACTGAGGAAACGATCCGGAACCTTGACGAGAACTACTACGACCCCTACTACGACCCCACCAGCTCCCCGTCGGAGATCGGGCCG GGAATGCCGGCGAACCAGGATACCATCTATGAAGGGATTGGAGGACCTCGGGGCGAGAAAGGCCAAAAGGGAGAACCAGCGATTATCGAG CCGGGCATGCTCATCGAGGGCCCGCCTGGCCCAGAAGGCCCCGCGGGTCTTCCCGGACCTCCAGGAACCATGGGTCCCACTGGCCAAGTC GGGGACCCTGGAGAAAGGGGCCCCCCTGGACGCCCAGGCCTTCCTGGGGCCGATGGCCTGCCCGGTCCTCCAGGAACCATGCTCATGCTG CCCTTCCGGTTTGGAGGTGGCGGCGATGCGGGCTCCAAAGGCCCCATGGTCTCAGCCCAGGAGTCCCAGGCGCAAGCCATTCTCCAGCAG GCCAGGTTGGCACTGAGGGGACCAGCTGGCCCGATGGGTCTCACAGGGAGACCTGGCCCTGTGGGTCCCCCTGGGAGCGGAGGTTTGAAG GGCGAGCCGGGAGACGTGGGGCCTCAGGGTCCTCGAGGTGTGCAAGGCCCGCCTGGTCCGGCCGGGAAGCCCGGAAGACGGGGTCGGGCT GGGAGTGATGGAGCCAGAGGAATGCCTGGACAAACTGGCCCCAAGGGTGACCGGGGTTTCGACGGCCTGGCTGGGTTGCCAGGCGAGAAG GGCCACAGGGGTGACCCTGGTCCTTCCGGCCCACCAGGACCTCCGGGAGACGATGGAGAAAGGGGTGACGACGGAGAAGTTGGGCCCAGG GGGCTGCCTGGGGAGCCCGGGCCACGTGGTCTGCTTGGGCCGAAGGGGCCCCCAGGTCCTCCCGGACCTCCCGGTGTCACGGGTATGGAC GGCCAGCCGGGGCCAAAAGGAAATGTGGGTCCCCAGGGAGAGCCTGGCCCCCCAGGACAGCAGGGTAATCCAGGCGCCCAGGGTCTTCCA GGCCCCCAGGGTGCAATTGGTCCTCCAGGAGAAAAGGGTCCCTTGGGGAAACCAGGCCTTCCAGGAATGCCCGGTGCTGACGGACCCCCG GGACACCCTGGCAAAGAAGGCCCTCCAGGAGAGAAAGGAGGTCAGGGTCCACCTGGCCCCCAGGGTCCGATTGGCTACCCAGGTCCTCGA GGAGTCAAGGGGGCCGATGGCATCCGTGGTCTGAAGGGCACAAAGGGCGAGAAGGGTGAAGACGGCTTTCCTGGGTTTAAAGGAGACATG GGCATCAAGGGTGATCGGGGGGAGATCGGCCCACCCGGTCCCAGGGGAGAAGATGGCCCTGAAGGCCCAAAGGGTCGCGGAGGTCCCAAT GGTGACCCCGGTCCTCTGGGACCCCCTGGGGAGAAGGGAAAACTCGGAGTCCCAGGGTTACCAGGGTATCCAGGAAGACAAGGACCAAAG GGCTCTATTGGATTCCCTGGATTTCCTGGCGCCAATGGAGAGAAGGGCGGCAGGGGGACCCCTGGAAAGCCAGGACCGCGGGGGCAGCGA GGCCCAACGGGTCCGAGGGGTGAAAGAGGCCCCCGGGGCATCACTGGGAAGCCTGGCCCCAAGGGCAACTCCGGAGGTGACGGCCCAGCT GGCCCTCCTGGTGAACGGGGACCCAATGGACCCCAAGGACCCACAGGATTTCCTGGACCAAAGGGCCCCCCTGGCCCTCCAGGCAAGGAT GGACTCCCAGGACACCCTGGACAGAGAGGCGAGACTGGTTTCCAAGGCAAGACCGGCCCTCCAGGCCCCCCCGGCGTGGTCGGCCCTCAG GGTCCCACGGGAGAAACGGGCCCAATGGGTGAGCGTGGCCACCCTGGGCCCCCTGGACCCCCCGGTGAACAGGGGCTTCCGGGCCTTGCT GGAAAAGAAGGGACGAAGGGTGACCCAGGCCCTGCAGGCCTCCCTGGGAAAGATGGCCCTCCAGGATTACGTGGTTTCCCTGGGGACCGA GGGCTTCCTGGTCCAGTGGGAGCTCTTGGACTGAAAGGCAATGAAGGGCCCCCTGGCCCACCAGGCCCTGCGGGATCTCCAGGGGAGAGA GGTCCAGCTGGAGCCGCTGGGCCCATCGGAATTCCAGGGAGACCTGGGCCCCAGGGACCCCCAGGGCCGGCAGGAGAGAAAGGGGCTCCT GGCGAGAAAGGCCCACAAGGCCCAGCTGGCCGAGACGGTCTCCAGGGGCCTGTGGGGCTCCCGGGTCCAGCTGGCCCTGTGGGTCCCCCT GGAGAAGACGGAGATAAGGGAGAGATCGGGGAGCCGGGGCAGAAAGGAAGCAAGGGGGACAAAGGAGAACAGGGTCCTCCTGGGCCTACA GGTCCTCAAGGCCCCATCGGACAGCCAGGCCCCTCTGGAGCTGACGGCGAGCCGGGGCCTCGGGGCCAGCAGGGCCTTTTCGGGCAGAAA GGTGATGAAGGTCCCAGAGGCTTTCCTGGACCCCCTGGGCCAGTGGGGCTGCAGGGTTTGCCAGGACCTCCAGGCGAGAAGGGTGAGACA GGAGACGTGGGCCAGATGGGCCCCCCGGGTCCCCCTGGCCCCCGAGGACCCTCCGGAGCTCCAGGTGCTGATGGCCCACAAGGTCCCCCA GGTGGAATAGGAAACCCTGGTGCAGTGGGAGAGAAGGGCGAGCCTGGCGAAGCAGGTGAGCCTGGCCTTCCGGGAGAAGGCGGCCCCCCG GGACCCAAAGGAGAAAGGGGAGAGAAGGGCGAGTCAGGCCCTTCAGGTGCTGCCGGACCCCCTGGACCCAAAGGCCCTCCCGGAGATGAT GGTCCCAAAGGCAGCCCTGGCCCAGTGGGTTTTCCTGGAGATCCTGGCCCCCCCGGAGAGCCTGGCCCCGCGGGTCAAGATGGTCCCCCT GGTGACAAAGGAGATGATGGTGAACCCGGGCAGACGGGATCCCCCGGCCCTACTGGTGAACCAGGTCCATCGGGGCCTCCAGGAAAAAGG GGTCCCCCAGGCCCCGCAGGCCCCGAAGGCAGACAGGGAGAGAAAGGGGCCAAGGGAGAAGCCGGCTTGGAAGGCCCTCCTGGGAAGACT GGCCCCATCGGCCCCCAGGGGGCCCCTGGGAAGCCCGGACCGGATGGCCTTCGAGGGATCCCTGGCCCTGTGGGAGAACAAGGTCTCCCA GGATCCCCAGGCCCGGACGGTCCCCCCGGCCCCATGGGTCCCCCAGGACTTCCCGGCCTCAAAGGAGATTCTGGTCCCAAAGGTGAAAAG GGTCATCCAGGCCTGATCGGGCTCATCGGTCCTCCGGGTGAACAGGGTGAGAAGGGCGACCGTGGTCTCCCTGGCCCCCAGGGCTCCTCC GGTCCTAAGGGAGAACAGGGTATCACTGGTCCTTCTGGCCCGATTGGGCCTCCTGGGCCCCCTGGCCTGCCGGGTCCGCCTGGTCCAAAA GGTGCTAAGGGCTCCTCGGGTCCAACTGGCCCGAAGGGTGAGGCAGGCCACCCAGGACCCCCAGGCCCCCCGGGCCCCCCGGGAGAGGTC ATCCAGCCCCTGCCAATCCAGGCATCCAGGACGCGGCGGAACATCGACGCCAGCCAGCTGCTGGACGACGGGAATGGCGAGAACTACGTG GACTACGCGGACGGCATGGAAGAGATCTTCGGCTCTCTCAACTCTCTGAAGCTGGAGATTGAGCAGATGAAACGGCCCCTGGGCACGCAG CAGAACCCCGCCCGCACCTGCAAGGACCTGCAGCTCTGCCACCCCGACTTCCCAGATGGTGAATACTGGGTCGATCCTAACCAAGGATGC TCCAGGGATTCCTTCAAGGTTTACTGCAACTTCACAGCCGGGGGGTCGACATGCGTCTTCCCTGACAAGAAGTCCGAAGGGGCCAGAATC ACTTCTTGGCCCAAAGAAAACCCGGGCTCCTGGTTCAGTGAATTCAAGCGTGGGAAACTGCTCTCCTATGTGGACGCCGAGGGCAACCCT GTGGGTGTGGTACAGATGACCTTCCTGCGGCTGCTGAGCGCCTCTGCCCACCAGAACGTCACCTACCACTGCTACCAGTCAGTGGCCTGG CAGGACGCAGCCACGGGCAGCTACGACAAGGCCCTCCGCTTCCTGGGCTCCAACGACGAGGAGATGTCCTATGACAACAACCCCTACATC CGCGCCCTGGTGGACGGCTGTGCTACCAAGAAAGGCTACCAGAAGACGGTTCTGGAGATCGACACCCCCAAAGTGGAGCAGGTGCCCATC |
| * Fusion transcript sequences (Full-length transcript). |
| >In-frame_KRT19_ENST00000361566_chr17_39679869_-_COL5A1_ENST00000371817_chr9_137533620_+_9858nt GCTCCTCCCGCGAATCGCAGCTTCTGAGACCAGGGTTGCTCCGTCCGTGCTCCGCCTCGCCATGACTTCCTACAGCTATCGCCAGTCGTC GGCCACGTCGTCCTTCGGAGGCCTGGGCGGCGGCTCCGTGCGTTTTGGGCCGGGGGTCGCCTTTCGCGCGCCCAGCATTCACGGGGGCTC CGGCGGCCGCGGCGTATCCGTGTCCTCCGCCCGCTTTGTGTCCTCGTCCTCCTCGGGGGCCTACGGCGGCGGCTACGGCGGCGTCCTGAC CGCGTCCGACGGGCTGCTGGCGGGCAACGAGAAGCTAACCATGCAGAACCTCAACGACCGCCTGGCCTCCTACCTGGACAAGGTGCGCGC CCTGGAGGCGGCCAACGGCGAGCTAGAGGTGAAGATCCGCGACTGGTACCAGAAGCAGGGGCCTGGGCCCTCCCGCGACTACAGCCACTA CTACACGACCATCCAGGACCTGCGGGACAAGATTCTTGGTGCCACCATTGAGAACTCCAGGATTGTCCTGCAGATCGACAATGCCCGTCT GGCTGCAGATGACTTCCGAACCAAGTTTGAGACGGAACAGGCTCTGCGCATGAGCGTGGAGGCCGACATCAACGGCCTGCGCAGGGTGCT GGATGAGCTGACCCTGGCCAGGACCGACCTGGAGATGCAGATCGAAGGCCTGAAGGAAGAGCTGGCCTACCTGAAGAAGAACCATGAGGA GGAAATCAGTACGCTGAGGGGCCAAGTGGGAGGCCAGGTCAGTGTGGAGGTGGATTCCGCTCCGGGCACCGATCTCGCCAAGATCCTGAG TGACATGCGAAGCCAATATGAGGTCATGGCCGAGCAGAACCGGAAGGATGCTGAAGCCTGGTTCACCAGCCGGACTGAAGAATTGAACCG GGAGGTCGCTGGCCACACGGAGCAGCTCCAGATGAGCAGGTCCGAGGTTACTGACCTGCGGCGCACCCTTCAGGGTCTTGAGATTGAGCT GCAGTCACAGCTGAGCATGAAAGCTGCCTTGGAAGACACACTGGCAGAAACGGAGGCGCGCTTTGGAGCCCAGCTGGCGCATATCCAGGC GCTGATCAGCGGTATTGAAGCCCAGCTGGGCGATGTGCGAGCTGATAGTGAGCGGCAGAATCAGGAGTACCAGCGGCTCATGGACATCAA GTCGCGGCTGGAGCAGGAGATTGCCACCTACCGCAGCCTGCTCGAGGGACAGGAAGATCACTACAACAATTTGTCTGCCTCCAAGGTCCT CTGAGGCAGCAGGCTCTGGGGCTTCTGCTGTCCTTTGGAGGGTGTCTTCTGGGTAGAGGGATGGGAAGGAAGGGACCCTTACCCCCGGCT CTTCTCCTGACCTGCCAATAAAAATTTATGGTCCAAGGGAGGAAAAAAGTGCTCCGCGCCGAAGGCGAGGTCCGCACTCTCCGTCCCCGC GGCTGGCGCAGGACCTCACTCGAGCGGAGCGCCCACGGGGAGCGGGTCGCGGGGCGGCGGCGGCGAGGAGGAGGCGAGAAGGAGTTGGAG GAGGAGGAGGAGGAGGCGAGGGCGAGCTAGCCCAGCGGGGTCCCGGCCGCCCCGCGGGCCAAAGTCGAGCCCTCCCGCCCGTGGGCGAGC GCGCCAGCCGCCCCTTCCAGAACAGCCGCCGCCACAAAGAAGAACGGGGGGTGCCGAGGTCCCCATGACCTCCTAAAGTGGTGCGGTCCC TGCTGAGTGCGCTGCCCGGGCCGTGACCCGCGCCCCTGTGCGTCCCCGCGCGCCTCCGAGCGCCCCTGTGCGCCCCGGCCCGCGCCCCGC CGGCATGGACGTCCATACCCGCTGGAAAGCGCGCAGCGCGCTCCGCCCGGGCGCCCCGCTGCTGCCCCCGCTGCTGCTGCTGCTGCTGTG GGCGCCGCCTCCGAGCCGCGCAGCTCAGCCAGCAGATCTCCTGAAGGTTCTAGATTTTCACAACTTGCCTGATGGAATAACAAAGACAAC AGGCTTTTGCGCCACGCGGCGATCTTCCAAAGGCCCGGATGTCGCTTACAGAGTCACCAAAGACGCGCAGCTCAGCGCACCCACCAAGCA GCTGTACCCTGCGTCTGCATTTCCCGAGGACTTCTCCATCCTAACAACTGTGAAAGCCAAGAAAGGCAGCCAGGCCTTCCTGGTCTCCAT CTACAACGAGCAGGGTATCCAGCAGATTGGGCTGGAGCTGGGCCGCTCTCCCGTCTTCCTCTACGAGGACCACACGGGGAAGCCTGGCCC GGAAGACTACCCCCTCTTCCGGGGCATCAACCTGTCAGATGGCAAGTGGCACAGAATTGCTCTCAGCGTCCACAAGAAAAATGTCACCTT GATCCTCGACTGTAAAAAGAAGACCACCAAATTCCTCGACCGCAGCGACCACCCCATGATCGACATCAATGGCATCATCGTGTTTGGCAC CCGGATCCTGGATGAGGAGGTGTTTGAGGGTGACATCCAGCAGCTGCTCTTTGTCTCGGACCACCGGGCAGCTTATGATTACTGTGAGCA CTACAGCCCTGACTGTGACACCGCAGTACCTGACACCCCACAGTCGCAGGACCCCAATCCAGATGAATATTACACGGAAGGAGACGGCGA GGGTGAGACCTATTACTACGAATACCCCTACTACGAAGACCCCGAAGACCTAGGGAAGGAGCCCACCCCCAGCAAGAAGCCCGTGGAAGC TGCCAAAGAAACCACAGAGGTCCCCGAGGAGCTGACCCCGACCCCCACGGAAGCTGCTCCCATGCCTGAAACCAGTGAAGGGGCTGGGAA GGAAGAGGACGTCGGCATCGGGGACTATGACTACGTGCCCAGTGAGGACTACTACACGCCCTCACCGTATGATGACCTCACCTATGGCGA GGGGGAGGAGAACCCCGACCAGCCCACAGACCCAGGCGCTGGGGCCGAAATTCCCACCAGCACCGCCGACACCTCCAACTCCTCCAATCC AGCTCCGCCTCCAGGGGAAGGTGCGGATGACTTGGAGGGGGAGTTCACTGAGGAAACGATCCGGAACCTTGACGAGAACTACTACGACCC CTACTACGACCCCACCAGCTCCCCGTCGGAGATCGGGCCGGGAATGCCGGCGAACCAGGATACCATCTATGAAGGGATTGGAGGACCTCG GGGCGAGAAAGGCCAAAAGGGAGAACCAGCGATTATCGAGCCGGGCATGCTCATCGAGGGCCCGCCTGGCCCAGAAGGCCCCGCGGGTCT TCCCGGACCTCCAGGAACCATGGGTCCCACTGGCCAAGTCGGGGACCCTGGAGAAAGGGGCCCCCCTGGACGCCCAGGCCTTCCTGGGGC CGATGGCCTGCCCGGTCCTCCAGGAACCATGCTCATGCTGCCCTTCCGGTTTGGAGGTGGCGGCGATGCGGGCTCCAAAGGCCCCATGGT CTCAGCCCAGGAGTCCCAGGCGCAAGCCATTCTCCAGCAGGCCAGGTTGGCACTGAGGGGACCAGCTGGCCCGATGGGTCTCACAGGGAG ACCTGGCCCTGTGGGTCCCCCTGGGAGCGGAGGTTTGAAGGGCGAGCCGGGAGACGTGGGGCCTCAGGGTCCTCGAGGTGTGCAAGGCCC GCCTGGTCCGGCCGGGAAGCCCGGAAGACGGGGTCGGGCTGGGAGTGATGGAGCCAGAGGAATGCCTGGACAAACTGGCCCCAAGGGTGA CCGGGGTTTCGACGGCCTGGCTGGGTTGCCAGGCGAGAAGGGCCACAGGGGTGACCCTGGTCCTTCCGGCCCACCAGGACCTCCGGGAGA CGATGGAGAAAGGGGTGACGACGGAGAAGTTGGGCCCAGGGGGCTGCCTGGGGAGCCCGGGCCACGTGGTCTGCTTGGGCCGAAGGGGCC CCCAGGTCCTCCCGGACCTCCCGGTGTCACGGGTATGGACGGCCAGCCGGGGCCAAAAGGAAATGTGGGTCCCCAGGGAGAGCCTGGCCC CCCAGGACAGCAGGGTAATCCAGGCGCCCAGGGTCTTCCAGGCCCCCAGGGTGCAATTGGTCCTCCAGGAGAAAAGGGTCCCTTGGGGAA ACCAGGCCTTCCAGGAATGCCCGGTGCTGACGGACCCCCGGGACACCCTGGCAAAGAAGGCCCTCCAGGAGAGAAAGGAGGTCAGGGTCC ACCTGGCCCCCAGGGTCCGATTGGCTACCCAGGTCCTCGAGGAGTCAAGGGGGCCGATGGCATCCGTGGTCTGAAGGGCACAAAGGGCGA GAAGGGTGAAGACGGCTTTCCTGGGTTTAAAGGAGACATGGGCATCAAGGGTGATCGGGGGGAGATCGGCCCACCCGGTCCCAGGGGAGA AGATGGCCCTGAAGGCCCAAAGGGTCGCGGAGGTCCCAATGGTGACCCCGGTCCTCTGGGACCCCCTGGGGAGAAGGGAAAACTCGGAGT CCCAGGGTTACCAGGGTATCCAGGAAGACAAGGACCAAAGGGCTCTATTGGATTCCCTGGATTTCCTGGCGCCAATGGAGAGAAGGGCGG CAGGGGGACCCCTGGAAAGCCAGGACCGCGGGGGCAGCGAGGCCCAACGGGTCCGAGGGGTGAAAGAGGCCCCCGGGGCATCACTGGGAA GCCTGGCCCCAAGGGCAACTCCGGAGGTGACGGCCCAGCTGGCCCTCCTGGTGAACGGGGACCCAATGGACCCCAAGGACCCACAGGATT TCCTGGACCAAAGGGCCCCCCTGGCCCTCCAGGCAAGGATGGACTCCCAGGACACCCTGGACAGAGAGGCGAGACTGGTTTCCAAGGCAA GACCGGCCCTCCAGGCCCCCCCGGCGTGGTCGGCCCTCAGGGTCCCACGGGAGAAACGGGCCCAATGGGTGAGCGTGGCCACCCTGGGCC CCCTGGACCCCCCGGTGAACAGGGGCTTCCGGGCCTTGCTGGAAAAGAAGGGACGAAGGGTGACCCAGGCCCTGCAGGCCTCCCTGGGAA AGATGGCCCTCCAGGATTACGTGGTTTCCCTGGGGACCGAGGGCTTCCTGGTCCAGTGGGAGCTCTTGGACTGAAAGGCAATGAAGGGCC CCCTGGCCCACCAGGCCCTGCGGGATCTCCAGGGGAGAGAGGTCCAGCTGGAGCCGCTGGGCCCATCGGAATTCCAGGGAGACCTGGGCC CCAGGGACCCCCAGGGCCGGCAGGAGAGAAAGGGGCTCCTGGCGAGAAAGGCCCACAAGGCCCAGCTGGCCGAGACGGTCTCCAGGGGCC TGTGGGGCTCCCGGGTCCAGCTGGCCCTGTGGGTCCCCCTGGAGAAGACGGAGATAAGGGAGAGATCGGGGAGCCGGGGCAGAAAGGAAG CAAGGGGGACAAAGGAGAACAGGGTCCTCCTGGGCCTACAGGTCCTCAAGGCCCCATCGGACAGCCAGGCCCCTCTGGAGCTGACGGCGA GCCGGGGCCTCGGGGCCAGCAGGGCCTTTTCGGGCAGAAAGGTGATGAAGGTCCCAGAGGCTTTCCTGGACCCCCTGGGCCAGTGGGGCT GCAGGGTTTGCCAGGACCTCCAGGCGAGAAGGGTGAGACAGGAGACGTGGGCCAGATGGGCCCCCCGGGTCCCCCTGGCCCCCGAGGACC CTCCGGAGCTCCAGGTGCTGATGGCCCACAAGGTCCCCCAGGTGGAATAGGAAACCCTGGTGCAGTGGGAGAGAAGGGCGAGCCTGGCGA AGCAGGTGAGCCTGGCCTTCCGGGAGAAGGCGGCCCCCCGGGACCCAAAGGAGAAAGGGGAGAGAAGGGCGAGTCAGGCCCTTCAGGTGC TGCCGGACCCCCTGGACCCAAAGGCCCTCCCGGAGATGATGGTCCCAAAGGCAGCCCTGGCCCAGTGGGTTTTCCTGGAGATCCTGGCCC CCCCGGAGAGCCTGGCCCCGCGGGTCAAGATGGTCCCCCTGGTGACAAAGGAGATGATGGTGAACCCGGGCAGACGGGATCCCCCGGCCC TACTGGTGAACCAGGTCCATCGGGGCCTCCAGGAAAAAGGGGTCCCCCAGGCCCCGCAGGCCCCGAAGGCAGACAGGGAGAGAAAGGGGC CAAGGGAGAAGCCGGCTTGGAAGGCCCTCCTGGGAAGACTGGCCCCATCGGCCCCCAGGGGGCCCCTGGGAAGCCCGGACCGGATGGCCT TCGAGGGATCCCTGGCCCTGTGGGAGAACAAGGTCTCCCAGGATCCCCAGGCCCGGACGGTCCCCCCGGCCCCATGGGTCCCCCAGGACT TCCCGGCCTCAAAGGAGATTCTGGTCCCAAAGGTGAAAAGGGTCATCCAGGCCTGATCGGGCTCATCGGTCCTCCGGGTGAACAGGGTGA GAAGGGCGACCGTGGTCTCCCTGGCCCCCAGGGCTCCTCCGGTCCTAAGGGAGAACAGGGTATCACTGGTCCTTCTGGCCCGATTGGGCC TCCTGGGCCCCCTGGCCTGCCGGGTCCGCCTGGTCCAAAAGGTGCTAAGGGCTCCTCGGGTCCAACTGGCCCGAAGGGTGAGGCAGGCCA CCCAGGACCCCCAGGCCCCCCGGGCCCCCCGGGAGAGGTCATCCAGCCCCTGCCAATCCAGGCATCCAGGACGCGGCGGAACATCGACGC CAGCCAGCTGCTGGACGACGGGAATGGCGAGAACTACGTGGACTACGCGGACGGCATGGAAGAGATCTTCGGCTCTCTCAACTCTCTGAA GCTGGAGATTGAGCAGATGAAACGGCCCCTGGGCACGCAGCAGAACCCCGCCCGCACCTGCAAGGACCTGCAGCTCTGCCACCCCGACTT CCCAGATGGTGAATACTGGGTCGATCCTAACCAAGGATGCTCCAGGGATTCCTTCAAGGTTTACTGCAACTTCACAGCCGGGGGGTCGAC ATGCGTCTTCCCTGACAAGAAGTCCGAAGGGGCCAGAATCACTTCTTGGCCCAAAGAAAACCCGGGCTCCTGGTTCAGTGAATTCAAGCG TGGGAAACTGCTCTCCTATGTGGACGCCGAGGGCAACCCTGTGGGTGTGGTACAGATGACCTTCCTGCGGCTGCTGAGCGCCTCTGCCCA CCAGAACGTCACCTACCACTGCTACCAGTCAGTGGCCTGGCAGGACGCAGCCACGGGCAGCTACGACAAGGCCCTCCGCTTCCTGGGCTC CAACGACGAGGAGATGTCCTATGACAACAACCCCTACATCCGCGCCCTGGTGGACGGCTGTGCTACCAAGAAAGGCTACCAGAAGACGGT TCTGGAGATCGACACCCCCAAAGTGGAGCAGGTGCCCATCGTGGACATCATGTTCAATGACTTCGGTGAAGCGTCACAGAAATTTGGATT TGAAGTGGGGCCGGCTTGCTTCATGGGCTAGGAGCCGCCGAGCCCGGGCTCCCGAGAGCAACCTCGTGACCTCAGCATGCCATTCGTTCG TGAGTGTCCCGTGCACGTCCTGACCCTGGACAGTGAAGGCTTCTCCCTCCCCTCCCACCTGACTTCATCTACGCCTCGGCACCACGGGGT GTGGGACCCCAGCCCGGAGAGAACAGAGGGAAGGAGCCGCGCCCCCACCTGGAGCTGAATCACATGACCTAGCTGCACCCCAGCGCCTGG GCCCGCCCCACGCTCTGTCCACACCCACGCGCCCCGGGAGCGGGGCCATGCCTCCAGCCCCCCAGCTCGCCCGACCCATCCTGTTCGTGA ATAGGTCTCAGGGGTTGGGGGAGGGACTGCCAGATTTGGACACTATATTTTTTTCTAAATTCAACTTGAAGATGTGTATTTCCCCTGACC TTCAAAAAATGTTCCAAGGTAAGCCTCGTAAAGGTCATCCCACCATCACCAAAGCCTCCGTTTTTAACAACCTCCAACACGATCCATTTA GAGGCCAAATGTCATTCTGCAGGTGCCTTCCCGATGGATTAAAGGTGCTTATGTTTTTGTGAGTTTTAAGTAAATATTTGTATTGTATTG TTATAAATGTTAAGTGTGCCTGGCTTTCAATCATGCACGGAAACCCAGTCTCAGTCCCACGGACAGAATGGGCGAGGCATGGATTCTGGG TTGCAGTACCGTTCTGATTAGAAATAGGAAGTCTCCCCACCCCCGCCCTGGCCAAGAACGTGCAATAAATTGGAAGTTTGCCCCGGGGCA GCAAGAATTTATGCTGCCATTGAAAAGCAGGTACCAGTGCCCCTTTTCAGACAGTTTTTGATTCGCTCTAGACTTTTTTTTTTTTTAATA GGGAAAAAATTTGATAATTTTCTTTTTTCTACATGCACTTAAGACTAAAACACAGGTTTGGATTAATTTTATTTGCTTCCTTTTTCCGCT TTTCTTCCCGCAGAGCCTGATGGGAGAATGTCCAGGGCAGGGAAACCACATTTTTTGTAGGTGATAACTCAATGAAAATTGGTGCTTATT TTTTACACTTCTCTCTTGTGGCTCTCTTGTGGTGCTATCTATCTGTTTTAAGGTCTCCTTGAAGGCGCACTGGGGACCCTGGCCATGCCT CGTTCTCCCTGCTTTCTTTATCCTGTTATTGCCTCCACAGTCTGTTGCCAAGGACTCTAAGATCAATGCACGTCACTTTCCTTTCCACTG GGCAGGATAGCCAAGCACACTCCCTCCTGCGCTCTCCCGCCCCGGTGCGTCCACTCCCGAGGGCTGTTATGAGGACTGGGTTGTGCCTAC TTGATTTGAAAACACACACAAGCAATAAAAAGCCTCTTCCTGCATTGTCTGTGGTGTGACCATAGCAGATTATATTTGGTTCCTGAATGT TTGTGGTGCTAATTTCTGTGTTTGTTCCAAGCCGTTCAGTCATGCCATGCGCTGCCTCGGTAGATGGAGTAATGTACAATGAACTCCATG AGTCTCTCCAGGGCTGCCTGCAGCACGTCTTTTCCAAGTAGCCTATTTGGATTCCCATCTCAAATGTCCTGGATGCGAGCGTCAGCGGCT CCAGAGCTCGGGGCGGGTGAGGTCCCCTTTGGGGAACCCTTTCCTGGCCATCGAGGTCGGGGGGCTGCCGTCTGTGGGCAGGAGGACCCG AGGGGCAGCCAGGAAAGGCGATCTCTTCACTGTGAAAAGTTGCCCGGGTGCAGCGCCTTTTCCTTCTACCATGGGAAATGCAGGCTGGGC CCTTGGGGTGAGCCTGCGGGGCTCTGGTGCTGTCCCCGACCCCCACCACCACCAGAATGCAGTTCCAGCTTAGGAAGCCACAAACAAGCC ACCCAGGAGGAACAAAACACCGCCAGCGTGGATTTTCCAAATTTCCCTGGAAAGTAAGTCTCGCTCTTGCCAAAGAAAAGTCTGGCTTGG AGAGTCTCTGGAGCCCAGGATGCCAGCATGTGCCAATGACTGTCACCTTCATCTCTTCAAAAGAAAAGCCATAGCCGAGGACTGTCCCGC GACCCCCGTGGACTGCGTCTAGGTCATGTGATTCTGTTTTCATTTCTCATCCCATCCAATTTGTCCTTTTCTCCTGTCATTTTCTTCCTC TGTGGTCCCTTCAAAGTTGTTATAATTTGTACTGAACTTCAAAATGTGTCCCGTTCTCCCCAGACCACTCTAGCCACAGTATATTGCAAT AAAATTACTTCTTATATTTGCAGAAATTCTTTTGGTGTAATTTTATTTTTTCCTCTCAATATATATAATTGGACAAACGCTGGCAAAAAG AAAAAAATGGTAAGCAAAAAACCCAAGATAAAGTTTCGAGGACATCAGGCCTTTTGAAATACAATGTCAAATGACACATTGTACGGTTTC AAAAAATCCGCTAGACATGTCATAAGTTTTAACTGTAATGCCCAGGAAAGGATATCTTAAAATATTCTAAACTTGTGTAACAAAGGAATA |
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FusionGenePPI for KRT19_COL5A1 |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
| Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
| Hgene | Hgene's interactors | Tgene | Tgene's interactors |
| KRT19 | HGS, DGCR6L, SFI1, ABI2, KRT6B, PCM1, KRT15, C10orf10, EXOC8, ZNF638, USHBP1, FANCG, FAM107A, PNN, USP32, PLEKHA5, APC, POU5F1, UCHL5, GRB2, CRK, MAGOH, EIF4A3, FN1, VCAM1, ITGA4, PAN2, BAG3, KDM1A, KIFC3, KRT2, KRT19, UBE2I, EIF4E2, POLR1C, IKZF3, TFPT, TBC1D7, AMOTL2, C1orf109, EIF4ENIF1, CCDC146, CARD9, FAM124B, HAUS1, PPP1R18, CEP57L1, EED, ESR1, MCM5, CYLD, SMARCB1, UBE2A | COL5A1 | SPARC, THBS1, MAG, SIRT7, PDGFA, PDGFB, C1QTNF2, PTPN2, COL8A2, CSNK2A2, PTPN1, TGM2, PLOD1, MMP9, MMP2, PRSS23, TRIM25 |
| - Retained PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| - Lost PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
| - Retained PPIs, but lost function due to frame-shift fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for KRT19_COL5A1 |
| Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
| Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for KRT19_COL5A1 |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
| Hgene | KRT19 | C0004096 | Asthma | 1 | CTD_human |
| Hgene | KRT19 | C0004364 | Autoimmune Diseases | 1 | CTD_human |
| Hgene | KRT19 | C0007621 | Neoplastic Cell Transformation | 1 | CTD_human |
| Hgene | KRT19 | C0008311 | Cholangitis | 1 | CTD_human |
| Hgene | KRT19 | C0019189 | Hepatitis, Chronic | 1 | CTD_human |
| Hgene | KRT19 | C0023893 | Liver Cirrhosis, Experimental | 1 | CTD_human |
| Hgene | KRT19 | C0027626 | Neoplasm Invasiveness | 1 | CTD_human |
| Hgene | KRT19 | C0279626 | Squamous cell carcinoma of esophagus | 1 | CTD_human |
| Hgene | KRT19 | C1876165 | Copper-Overload Cirrhosis | 1 | CTD_human |
| Tgene | COL5A1 | C4225429 | Ehlers-Danlos syndrome classic type | 4 | UNIPROT |
| Tgene | COL5A1 | C0268335 | Ehlers-Danlos syndrome type 1 | 3 | CTD_human;ORPHANET |
| Tgene | COL5A1 | C0268336 | Ehlers-Danlos syndrome type 2 | 2 | CTD_human;ORPHANET |
| Tgene | COL5A1 | C0000786 | Spontaneous abortion | 1 | CTD_human |
| Tgene | COL5A1 | C0022548 | Keloid | 1 | CTD_human |
| Tgene | COL5A1 | C0023893 | Liver Cirrhosis, Experimental | 1 | CTD_human |
| Tgene | COL5A1 | C0024667 | Animal Mammary Neoplasms | 1 | CTD_human |
| Tgene | COL5A1 | C0024668 | Mammary Neoplasms, Experimental | 1 | CTD_human |
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