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Fusion gene ID: 18358 |
FusionGeneSummary for KCTD18_SNED1 |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: KCTD18_SNED1 | Fusion gene ID: 18358 | Hgene | Tgene | Gene symbol | KCTD18 | SNED1 | Gene ID | 130535 | 25992 |
| Gene name | potassium channel tetramerization domain containing 18 | sushi, nidogen and EGF like domains 1 | |
| Synonyms | 6530404F10Rik | IRE-BP1|SST3|Snep | |
| Cytomap | 2q33.1 | 2q37.3 | |
| Type of gene | protein-coding | protein-coding | |
| Description | BTB/POZ domain-containing protein KCTD18potassium channel tetramerisation domain containing 18 | sushi, nidogen and EGF-like domain-containing protein 1insulin responsive sequence DNA binding protein-1 | |
| Modification date | 20180519 | 20180403 | |
| UniProtAcc | Q6PI47 | Q8TER0 | |
| Ensembl transtripts involved in fusion gene | ENST00000359878, ENST00000409157, ENST00000468413, | ENST00000401884, ENST00000342631, ENST00000405547, ENST00000310397, ENST00000469006, | |
| Fusion gene scores | * DoF score | 2 X 1 X 2=4 | 4 X 6 X 3=72 |
| # samples | 2 | 6 | |
| ** MAII score | log2(2/4*10)=2.32192809488736 | log2(6/72*10)=-0.263034405833794 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
| Context | PubMed: KCTD18 [Title/Abstract] AND SNED1 [Title/Abstract] AND fusion [Title/Abstract] | ||
| Functional or gene categories assigned by FusionGDB annotation | |||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| TCGA | RV | LUAD | TCGA-75-6207-01A | KCTD18 | chr2 | 201362476 | - | SNED1 | chr2 | 242007179 | + |
| * LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
| Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| Frame-shift | ENST00000359878 | ENST00000401884 | KCTD18 | chr2 | 201362476 | - | SNED1 | chr2 | 242007179 | + |
| Frame-shift | ENST00000359878 | ENST00000342631 | KCTD18 | chr2 | 201362476 | - | SNED1 | chr2 | 242007179 | + |
| Frame-shift | ENST00000359878 | ENST00000405547 | KCTD18 | chr2 | 201362476 | - | SNED1 | chr2 | 242007179 | + |
| Frame-shift | ENST00000359878 | ENST00000310397 | KCTD18 | chr2 | 201362476 | - | SNED1 | chr2 | 242007179 | + |
| 5CDS-intron | ENST00000359878 | ENST00000469006 | KCTD18 | chr2 | 201362476 | - | SNED1 | chr2 | 242007179 | + |
| In-frame | ENST00000409157 | ENST00000401884 | KCTD18 | chr2 | 201362476 | - | SNED1 | chr2 | 242007179 | + |
| In-frame | ENST00000409157 | ENST00000342631 | KCTD18 | chr2 | 201362476 | - | SNED1 | chr2 | 242007179 | + |
| In-frame | ENST00000409157 | ENST00000405547 | KCTD18 | chr2 | 201362476 | - | SNED1 | chr2 | 242007179 | + |
| In-frame | ENST00000409157 | ENST00000310397 | KCTD18 | chr2 | 201362476 | - | SNED1 | chr2 | 242007179 | + |
| 5CDS-intron | ENST00000409157 | ENST00000469006 | KCTD18 | chr2 | 201362476 | - | SNED1 | chr2 | 242007179 | + |
| 5UTR-3CDS | ENST00000468413 | ENST00000401884 | KCTD18 | chr2 | 201362476 | - | SNED1 | chr2 | 242007179 | + |
| 5UTR-3CDS | ENST00000468413 | ENST00000342631 | KCTD18 | chr2 | 201362476 | - | SNED1 | chr2 | 242007179 | + |
| 5UTR-3CDS | ENST00000468413 | ENST00000405547 | KCTD18 | chr2 | 201362476 | - | SNED1 | chr2 | 242007179 | + |
| 5UTR-3CDS | ENST00000468413 | ENST00000310397 | KCTD18 | chr2 | 201362476 | - | SNED1 | chr2 | 242007179 | + |
| 5UTR-intron | ENST00000468413 | ENST00000469006 | KCTD18 | chr2 | 201362476 | - | SNED1 | chr2 | 242007179 | + |
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FusionProtFeatures for KCTD18_SNED1 |
| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| KCTD18 | SNED1 |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
| - In-frame and retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| - In-frame and not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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FusionGeneSequence for KCTD18_SNED1 |
| For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
| * Fusion amino acid sequences. |
| >In-frame_KCTD18_ENST00000409157_chr2_201362476_-_SNED1_ENST00000401884_chr2_242007179_+_542aa MEGHKAEEEVLDVLRLNVGGCIYTARRESLCRFKDSMLASMFSGRFPLKTDESGACVIDRDGRLFKYLLDYLHGEVQIPTDEQTRIALQE EADYFGIPYPYSLSDHLANEMETYSLRSNIELKKALTDFCDSYGLVCNKPTVWVLHYLNTSGASCESRIIGVYATKTDGTDAIEKQLGGR IHSKGIFKREAGNNVQYIWSYYSVAELKKMMDAFDAWEGKGPRPVEGFEVTNVTASTISVQWALHRIRHATVSGVRVSIRHPEALRDQAT DVDRSVDRFTFRALLPGKRYTIQLTTLSGLRGEEHPTESLATAPTHVWTRPLPPANLTAARVTATSAHVVWDAPTPGSLLEAYVINVTTS QSTKSRYVPNGKLASYTVRDLLPGRRYQLSVIAVQSTELGPQHSEPAHLYIITSPRDGADRRWHQGGHHPRVLKNRPPPARLPELRLLND HSAPETPTQPPRFSELVDGRGRVSARFGGSPSKAATVRSQPTASAQLENMEEAPKRVSLALQLPEHGSKDIGSESAALVGTLGLTDCSQG >In-frame_KCTD18_ENST00000409157_chr2_201362476_-_SNED1_ENST00000342631_chr2_242007179_+_598aa MEGHKAEEEVLDVLRLNVGGCIYTARRESLCRFKDSMLASMFSGRFPLKTDESGACVIDRDGRLFKYLLDYLHGEVQIPTDEQTRIALQE EADYFGIPYPYSLSDHLANEMETYSLRSNIELKKALTDFCDSYGLVCNKPTVWVLHYLNTSGASCESRIIGVYATKTDGTDAIEKQLGGR IHSKGIFKREAGNNVQYIWSYYSVAELKKMMDAFDAWEGKGPRPVEGFEVTNVTASTISVQWALHRIRHATVSGVRVSIRHPEALRDQAT DVDRSVDRFTFRALLPGKRYTIQLTTLSGLRGEEHPTESLATAPTHVWTRPLPPANLTAARVTATSAHVVWDAPTPGSLLEAYVINVTTS QSTKSRYVPNGKLASYTVRDLLPGRRYQLSVIAVQSTELGPQHSEPAHLYIITSPRDGADRRWHQGGHHPRVLKNRPPPARLPELRLLND HSAPETPTQPPRFSELVDGRGRVSARFGGSPSKAATVRSHVPGNCSENPCQNGGTCVPGADAHSCDCGPGFKGRRCELACIKVSRPCTRL >In-frame_KCTD18_ENST00000409157_chr2_201362476_-_SNED1_ENST00000405547_chr2_242007179_+_570aa MEGHKAEEEVLDVLRLNVGGCIYTARRESLCRFKDSMLASMFSGRFPLKTDESGACVIDRDGRLFKYLLDYLHGEVQIPTDEQTRIALQE EADYFGIPYPYSLSDHLANEMETYSLRSNIELKKALTDFCDSYGLVCNKPTVWVLHYLNTSGASCESRIIGVYATKTDGTDAIEKQLGGR IHSKGIFKREAGNNVQYIWSYYSVAELKKMMDAFDAWEGKGPRPVEGFEVTNVTASTISVQWALHRIRHATVSGVRVSIRHPEALRDQAT DVDRSVDRFTFRALLPGKRYTIQLTTLSGLRGEEHPTESLATAPTHVWTRPLPPANLTAARVTATSAHVVWDAPTPGSLLEAYVINVTTS QSTKSRYVPNGKLASYTVRDLLPGRRYQLSVIAVQSTELGPQHSEPAHLYIITSPRDGADRRWHQGGHHPRVLKNRPPPARLPELRLLND HSAPETPTQPPRFSELVDGRGRVSARFGGSPSKAATVRSHVPGNCSENPCQNGGTCVPGADAHSCDCGPGFKGRRCELACIKVSRPCTRL >In-frame_KCTD18_ENST00000409157_chr2_201362476_-_SNED1_ENST00000310397_chr2_242007179_+_631aa MEGHKAEEEVLDVLRLNVGGCIYTARRESLCRFKDSMLASMFSGRFPLKTDESGACVIDRDGRLFKYLLDYLHGEVQIPTDEQTRIALQE EADYFGIPYPYSLSDHLANEMETYSLRSNIELKKALTDFCDSYGLVCNKPTVWVLHYLNTSGASCESRIIGVYATKTDGTDAIEKQLGGR IHSKGIFKREAGNNVQYIWSYYSVAELKKMMDAFDAWEGKGPRPVEGFEVTNVTASTISVQWALHRIRHATVSGVRVSIRHPEALRDQAT DVDRSVDRFTFRALLPGKRYTIQLTTLSGLRGEEHPTESLATAPTHVWTRPLPPANLTAARVTATSAHVVWDAPTPGSLLEAYVINVTTS QSTKSRYVPNGKLASYTVRDLLPGRRYQLSVIAVQSTELGPQHSEPAHLYIITSPRDGADRRWHQGGHHPRVLKNRPPPARLPELRLLND HSAPETPTQPPRFSELVDGRGRVSARFGGSPSKAATVRSQPTASAQLENMEEAPKRVSLALQLPEHGSKDIGNVPGNCSENPCQNGGTCV PGADAHSCDCGPGFKGRRCELACIKVSRPCTRLFSETKAFPVWEGGVCHHVYKRVYRVHQDICFKESCESTSLKKTPNRKQSKSQTLEKS |
| * Fusion transcript sequences (only coding sequence (CDS) region). |
| >In-frame_KCTD18_ENST00000409157_chr2_201362476_-_SNED1_ENST00000401884_chr2_242007179_+_1626nt ATGGAAGGCCACAAGGCAGAAGAAGAGGTGCTAGATGTTCTCCGACTGAACGTGGGTGGCTGTATTTACACAGCCCGGCGGGAGTCCTTG TGCCGCTTCAAGGACTCCATGTTGGCATCTATGTTCAGTGGTCGCTTTCCTCTAAAAACAGATGAGTCAGGGGCTTGTGTTATTGACCGT GATGGACGTCTATTTAAATACCTTTTGGATTACCTTCATGGAGAAGTTCAGATTCCCACAGATGAGCAAACCCGCATCGCCCTACAGGAA GAGGCTGATTACTTTGGCATCCCTTATCCATACAGCCTGTCTGACCATTTGGCCAATGAAATGGAGACATATTCTTTAAGGTCAAATATA GAACTTAAAAAGGCTTTAACAGACTTCTGTGATTCATATGGCTTAGTCTGCAATAAACCAACAGTTTGGGTTCTCCACTATCTTAACACA TCTGGTGCAAGCTGTGAGAGTAGAATTATTGGTGTATATGCCACAAAAACTGATGGAACAGACGCTATTGAAAAGCAGCTGGGAGGAAGA ATTCACAGCAAAGGCATTTTTAAAAGAGAGGCGGGAAATAATGTTCAGTACATTTGGAGCTATTATTCAGTAGCAGAGTTGAAGAAAATG ATGGATGCCTTTGATGCTTGGGAAGGAAAAGGACCCCGCCCTGTGGAAGGCTTCGAGGTCACCAATGTGACGGCTAGCACCATCTCAGTG CAGTGGGCCCTGCACAGGATCCGCCATGCCACCGTCAGTGGGGTCCGTGTGTCCATCCGCCACCCTGAGGCCCTCAGGGACCAGGCCACC GATGTGGACAGGAGTGTGGACAGGTTCACCTTTAGGGCCCTGCTGCCTGGGAAGAGGTACACCATCCAGCTGACCACCCTCAGTGGGCTC AGGGGAGAGGAGCACCCCACAGAGAGCCTGGCCACCGCGCCGACGCACGTGTGGACCCGGCCCCTGCCTCCAGCAAACCTGACCGCCGCC CGAGTCACTGCCACCTCTGCCCACGTGGTCTGGGATGCCCCGACTCCAGGCAGCTTGCTGGAGGCTTATGTCATCAATGTGACCACCAGC CAGAGCACCAAGAGCCGCTATGTCCCCAACGGGAAGCTGGCGTCCTACACGGTGCGCGACCTGCTGCCGGGACGGCGGTACCAGCTCTCT GTGATAGCAGTGCAGAGCACGGAGCTCGGGCCGCAGCACAGCGAGCCCGCCCACCTCTACATCATCACCTCCCCCAGGGATGGCGCTGAC AGACGCTGGCACCAGGGAGGACACCACCCTCGGGTGCTCAAGAACAGACCGCCCCCGGCGCGCCTGCCGGAGCTGCGCCTGCTCAATGAC CACAGCGCCCCCGAGACCCCCACCCAGCCCCCCAGGTTCTCGGAGCTTGTGGACGGCAGAGGAAGAGTGAGCGCCAGGTTCGGTGGCTCA CCCAGCAAAGCAGCCACCGTGAGATCACAACCCACAGCCTCGGCGCAGCTCGAGAACATGGAGGAAGCCCCCAAGCGGGTCAGCCTGGCC CTCCAGCTCCCTGAACACGGCAGCAAGGACATCGGAAGTGAGTCAGCAGCGCTGGTGGGGACTTTGGGACTGACTGACTGCTCTCAGGGG >In-frame_KCTD18_ENST00000409157_chr2_201362476_-_SNED1_ENST00000342631_chr2_242007179_+_1794nt ATGGAAGGCCACAAGGCAGAAGAAGAGGTGCTAGATGTTCTCCGACTGAACGTGGGTGGCTGTATTTACACAGCCCGGCGGGAGTCCTTG TGCCGCTTCAAGGACTCCATGTTGGCATCTATGTTCAGTGGTCGCTTTCCTCTAAAAACAGATGAGTCAGGGGCTTGTGTTATTGACCGT GATGGACGTCTATTTAAATACCTTTTGGATTACCTTCATGGAGAAGTTCAGATTCCCACAGATGAGCAAACCCGCATCGCCCTACAGGAA GAGGCTGATTACTTTGGCATCCCTTATCCATACAGCCTGTCTGACCATTTGGCCAATGAAATGGAGACATATTCTTTAAGGTCAAATATA GAACTTAAAAAGGCTTTAACAGACTTCTGTGATTCATATGGCTTAGTCTGCAATAAACCAACAGTTTGGGTTCTCCACTATCTTAACACA TCTGGTGCAAGCTGTGAGAGTAGAATTATTGGTGTATATGCCACAAAAACTGATGGAACAGACGCTATTGAAAAGCAGCTGGGAGGAAGA ATTCACAGCAAAGGCATTTTTAAAAGAGAGGCGGGAAATAATGTTCAGTACATTTGGAGCTATTATTCAGTAGCAGAGTTGAAGAAAATG ATGGATGCCTTTGATGCTTGGGAAGGAAAAGGACCCCGCCCTGTGGAAGGCTTCGAGGTCACCAATGTGACGGCTAGCACCATCTCAGTG CAGTGGGCCCTGCACAGGATCCGCCATGCCACCGTCAGTGGGGTCCGTGTGTCCATCCGCCACCCTGAGGCCCTCAGGGACCAGGCCACC GATGTGGACAGGAGTGTGGACAGGTTCACCTTTAGGGCCCTGCTGCCTGGGAAGAGGTACACCATCCAGCTGACCACCCTCAGTGGGCTC AGGGGAGAGGAGCACCCCACAGAGAGCCTGGCCACCGCGCCGACGCACGTGTGGACCCGGCCCCTGCCTCCAGCAAACCTGACCGCCGCC CGAGTCACTGCCACCTCTGCCCACGTGGTCTGGGATGCCCCGACTCCAGGCAGCTTGCTGGAGGCTTATGTCATCAATGTGACCACCAGC CAGAGCACCAAGAGCCGCTATGTCCCCAACGGGAAGCTGGCGTCCTACACGGTGCGCGACCTGCTGCCGGGACGGCGGTACCAGCTCTCT GTGATAGCAGTGCAGAGCACGGAGCTCGGGCCGCAGCACAGCGAGCCCGCCCACCTCTACATCATCACCTCCCCCAGGGATGGCGCTGAC AGACGCTGGCACCAGGGAGGACACCACCCTCGGGTGCTCAAGAACAGACCGCCCCCGGCGCGCCTGCCGGAGCTGCGCCTGCTCAATGAC CACAGCGCCCCCGAGACCCCCACCCAGCCCCCCAGGTTCTCGGAGCTTGTGGACGGCAGAGGAAGAGTGAGCGCCAGGTTCGGTGGCTCA CCCAGCAAAGCAGCCACCGTGAGATCACACGTCCCTGGCAACTGTTCAGAAAACCCCTGTCAGAACGGAGGCACTTGTGTGCCGGGCGCA GACGCCCACAGCTGTGACTGCGGGCCAGGGTTCAAAGGCAGACGCTGCGAGCTCGCCTGTATAAAGGTGTCCCGCCCCTGCACAAGGCTG TTCTCCGAGACAAAGGCCTTTCCAGTCTGGGAGGGAGGCGTCTGTCACCACGTGTATAAAAGAGTCTACCGAGTTCACCAAGACATCTGC >In-frame_KCTD18_ENST00000409157_chr2_201362476_-_SNED1_ENST00000405547_chr2_242007179_+_1710nt ATGGAAGGCCACAAGGCAGAAGAAGAGGTGCTAGATGTTCTCCGACTGAACGTGGGTGGCTGTATTTACACAGCCCGGCGGGAGTCCTTG TGCCGCTTCAAGGACTCCATGTTGGCATCTATGTTCAGTGGTCGCTTTCCTCTAAAAACAGATGAGTCAGGGGCTTGTGTTATTGACCGT GATGGACGTCTATTTAAATACCTTTTGGATTACCTTCATGGAGAAGTTCAGATTCCCACAGATGAGCAAACCCGCATCGCCCTACAGGAA GAGGCTGATTACTTTGGCATCCCTTATCCATACAGCCTGTCTGACCATTTGGCCAATGAAATGGAGACATATTCTTTAAGGTCAAATATA GAACTTAAAAAGGCTTTAACAGACTTCTGTGATTCATATGGCTTAGTCTGCAATAAACCAACAGTTTGGGTTCTCCACTATCTTAACACA TCTGGTGCAAGCTGTGAGAGTAGAATTATTGGTGTATATGCCACAAAAACTGATGGAACAGACGCTATTGAAAAGCAGCTGGGAGGAAGA ATTCACAGCAAAGGCATTTTTAAAAGAGAGGCGGGAAATAATGTTCAGTACATTTGGAGCTATTATTCAGTAGCAGAGTTGAAGAAAATG ATGGATGCCTTTGATGCTTGGGAAGGAAAAGGACCCCGCCCTGTGGAAGGCTTCGAGGTCACCAATGTGACGGCTAGCACCATCTCAGTG CAGTGGGCCCTGCACAGGATCCGCCATGCCACCGTCAGTGGGGTCCGTGTGTCCATCCGCCACCCTGAGGCCCTCAGGGACCAGGCCACC GATGTGGACAGGAGTGTGGACAGGTTCACCTTTAGGGCCCTGCTGCCTGGGAAGAGGTACACCATCCAGCTGACCACCCTCAGTGGGCTC AGGGGAGAGGAGCACCCCACAGAGAGCCTGGCCACCGCGCCGACGCACGTGTGGACCCGGCCCCTGCCTCCAGCAAACCTGACCGCCGCC CGAGTCACTGCCACCTCTGCCCACGTGGTCTGGGATGCCCCGACTCCAGGCAGCTTGCTGGAGGCTTATGTCATCAATGTGACCACCAGC CAGAGCACCAAGAGCCGCTATGTCCCCAACGGGAAGCTGGCGTCCTACACGGTGCGCGACCTGCTGCCGGGACGGCGGTACCAGCTCTCT GTGATAGCAGTGCAGAGCACGGAGCTCGGGCCGCAGCACAGCGAGCCCGCCCACCTCTACATCATCACCTCCCCCAGGGATGGCGCTGAC AGACGCTGGCACCAGGGAGGACACCACCCTCGGGTGCTCAAGAACAGACCGCCCCCGGCGCGCCTGCCGGAGCTGCGCCTGCTCAATGAC CACAGCGCCCCCGAGACCCCCACCCAGCCCCCCAGGTTCTCGGAGCTTGTGGACGGCAGAGGAAGAGTGAGCGCCAGGTTCGGTGGCTCA CCCAGCAAAGCAGCCACCGTGAGATCACACGTCCCTGGCAACTGTTCAGAAAACCCCTGTCAGAACGGAGGCACTTGTGTGCCGGGCGCA GACGCCCACAGCTGTGACTGCGGGCCAGGGTTCAAAGGCAGACGCTGCGAGCTCGCCTGTATAAAGGTGTCCCGCCCCTGCACAAGGCTG TTCTCCGAGACAAAGGCCTTTCCAGTCTGGGAGGGAGGCGTCTGTCACCACGTGAAACAAAGTAAGAGTCAGACACTGGAGAAATCTTAA >In-frame_KCTD18_ENST00000409157_chr2_201362476_-_SNED1_ENST00000310397_chr2_242007179_+_1893nt ATGGAAGGCCACAAGGCAGAAGAAGAGGTGCTAGATGTTCTCCGACTGAACGTGGGTGGCTGTATTTACACAGCCCGGCGGGAGTCCTTG TGCCGCTTCAAGGACTCCATGTTGGCATCTATGTTCAGTGGTCGCTTTCCTCTAAAAACAGATGAGTCAGGGGCTTGTGTTATTGACCGT GATGGACGTCTATTTAAATACCTTTTGGATTACCTTCATGGAGAAGTTCAGATTCCCACAGATGAGCAAACCCGCATCGCCCTACAGGAA GAGGCTGATTACTTTGGCATCCCTTATCCATACAGCCTGTCTGACCATTTGGCCAATGAAATGGAGACATATTCTTTAAGGTCAAATATA GAACTTAAAAAGGCTTTAACAGACTTCTGTGATTCATATGGCTTAGTCTGCAATAAACCAACAGTTTGGGTTCTCCACTATCTTAACACA TCTGGTGCAAGCTGTGAGAGTAGAATTATTGGTGTATATGCCACAAAAACTGATGGAACAGACGCTATTGAAAAGCAGCTGGGAGGAAGA ATTCACAGCAAAGGCATTTTTAAAAGAGAGGCGGGAAATAATGTTCAGTACATTTGGAGCTATTATTCAGTAGCAGAGTTGAAGAAAATG ATGGATGCCTTTGATGCTTGGGAAGGAAAAGGACCCCGCCCTGTGGAAGGCTTCGAGGTCACCAATGTGACGGCTAGCACCATCTCAGTG CAGTGGGCCCTGCACAGGATCCGCCATGCCACCGTCAGTGGGGTCCGTGTGTCCATCCGCCACCCTGAGGCCCTCAGGGACCAGGCCACC GATGTGGACAGGAGTGTGGACAGGTTCACCTTTAGGGCCCTGCTGCCTGGGAAGAGGTACACCATCCAGCTGACCACCCTCAGTGGGCTC AGGGGAGAGGAGCACCCCACAGAGAGCCTGGCCACCGCGCCGACGCACGTGTGGACCCGGCCCCTGCCTCCAGCAAACCTGACCGCCGCC CGAGTCACTGCCACCTCTGCCCACGTGGTCTGGGATGCCCCGACTCCAGGCAGCTTGCTGGAGGCTTATGTCATCAATGTGACCACCAGC CAGAGCACCAAGAGCCGCTATGTCCCCAACGGGAAGCTGGCGTCCTACACGGTGCGCGACCTGCTGCCGGGACGGCGGTACCAGCTCTCT GTGATAGCAGTGCAGAGCACGGAGCTCGGGCCGCAGCACAGCGAGCCCGCCCACCTCTACATCATCACCTCCCCCAGGGATGGCGCTGAC AGACGCTGGCACCAGGGAGGACACCACCCTCGGGTGCTCAAGAACAGACCGCCCCCGGCGCGCCTGCCGGAGCTGCGCCTGCTCAATGAC CACAGCGCCCCCGAGACCCCCACCCAGCCCCCCAGGTTCTCGGAGCTTGTGGACGGCAGAGGAAGAGTGAGCGCCAGGTTCGGTGGCTCA CCCAGCAAAGCAGCCACCGTGAGATCACAACCCACAGCCTCGGCGCAGCTCGAGAACATGGAGGAAGCCCCCAAGCGGGTCAGCCTGGCC CTCCAGCTCCCTGAACACGGCAGCAAGGACATCGGAAACGTCCCTGGCAACTGTTCAGAAAACCCCTGTCAGAACGGAGGCACTTGTGTG CCGGGCGCAGACGCCCACAGCTGTGACTGCGGGCCAGGGTTCAAAGGCAGACGCTGCGAGCTCGCCTGTATAAAGGTGTCCCGCCCCTGC ACAAGGCTGTTCTCCGAGACAAAGGCCTTTCCAGTCTGGGAGGGAGGCGTCTGTCACCACGTGTATAAAAGAGTCTACCGAGTTCACCAA GACATCTGCTTCAAAGAGAGCTGTGAAAGCACAAGCCTCAAGAAGACCCCAAACAGGAAACAAAGTAAGAGTCAGACACTGGAGAAATCT |
| * Fusion transcript sequences (Full-length transcript). |
| >In-frame_KCTD18_ENST00000409157_chr2_201362476_-_SNED1_ENST00000401884_chr2_242007179_+_2322nt ACTTCCGCGTCCGCCCCGCGGCGTCCGGCGGCCGCGCCGAGGGTCTGGCGGGCCGCAGAGGGAGACCAAGACATCATTGTTTTGAAGTTT CTGAAAGTGTTGGGCGGCAAAAATTCAGGTGCCTGGGGGAGAAATGGAAGGCCACAAGGCAGAAGAAGAGGTGCTAGATGTTCTCCGACT GAACGTGGGTGGCTGTATTTACACAGCCCGGCGGGAGTCCTTGTGCCGCTTCAAGGACTCCATGTTGGCATCTATGTTCAGTGGTCGCTT TCCTCTAAAAACAGATGAGTCAGGGGCTTGTGTTATTGACCGTGATGGACGTCTATTTAAATACCTTTTGGATTACCTTCATGGAGAAGT TCAGATTCCCACAGATGAGCAAACCCGCATCGCCCTACAGGAAGAGGCTGATTACTTTGGCATCCCTTATCCATACAGCCTGTCTGACCA TTTGGCCAATGAAATGGAGACATATTCTTTAAGGTCAAATATAGAACTTAAAAAGGCTTTAACAGACTTCTGTGATTCATATGGCTTAGT CTGCAATAAACCAACAGTTTGGGTTCTCCACTATCTTAACACATCTGGTGCAAGCTGTGAGAGTAGAATTATTGGTGTATATGCCACAAA AACTGATGGAACAGACGCTATTGAAAAGCAGCTGGGAGGAAGAATTCACAGCAAAGGCATTTTTAAAAGAGAGGCGGGAAATAATGTTCA GTACATTTGGAGCTATTATTCAGTAGCAGAGTTGAAGAAAATGATGGATGCCTTTGATGCTTGGGAAGGAAAAGGACCCCGCCCTGTGGA AGGCTTCGAGGTCACCAATGTGACGGCTAGCACCATCTCAGTGCAGTGGGCCCTGCACAGGATCCGCCATGCCACCGTCAGTGGGGTCCG TGTGTCCATCCGCCACCCTGAGGCCCTCAGGGACCAGGCCACCGATGTGGACAGGAGTGTGGACAGGTTCACCTTTAGGGCCCTGCTGCC TGGGAAGAGGTACACCATCCAGCTGACCACCCTCAGTGGGCTCAGGGGAGAGGAGCACCCCACAGAGAGCCTGGCCACCGCGCCGACGCA CGTGTGGACCCGGCCCCTGCCTCCAGCAAACCTGACCGCCGCCCGAGTCACTGCCACCTCTGCCCACGTGGTCTGGGATGCCCCGACTCC AGGCAGCTTGCTGGAGGCTTATGTCATCAATGTGACCACCAGCCAGAGCACCAAGAGCCGCTATGTCCCCAACGGGAAGCTGGCGTCCTA CACGGTGCGCGACCTGCTGCCGGGACGGCGGTACCAGCTCTCTGTGATAGCAGTGCAGAGCACGGAGCTCGGGCCGCAGCACAGCGAGCC CGCCCACCTCTACATCATCACCTCCCCCAGGGATGGCGCTGACAGACGCTGGCACCAGGGAGGACACCACCCTCGGGTGCTCAAGAACAG ACCGCCCCCGGCGCGCCTGCCGGAGCTGCGCCTGCTCAATGACCACAGCGCCCCCGAGACCCCCACCCAGCCCCCCAGGTTCTCGGAGCT TGTGGACGGCAGAGGAAGAGTGAGCGCCAGGTTCGGTGGCTCACCCAGCAAAGCAGCCACCGTGAGATCACAACCCACAGCCTCGGCGCA GCTCGAGAACATGGAGGAAGCCCCCAAGCGGGTCAGCCTGGCCCTCCAGCTCCCTGAACACGGCAGCAAGGACATCGGAAGTGAGTCAGC AGCGCTGGTGGGGACTTTGGGACTGACTGACTGCTCTCAGGGGCCTTAGAGGCTGCAGGCAGGAGGGACCACCCACGGTGAGGAATCAGG AGGCACAGAGCCTACCTGAGGGGAGGCTGAGCACCAGGCACCCCGGTGTGGGAAGATGGGGTGAAGCTACACCACCCAAGCAGTGGGACC CCACAGACGGGAACAGGCCAGGGGGCAGGACCCACCCAAACCACCCAGAGTCTGAGCTAGAGAGACTGGCTTTGATGCTGCCTCCCCTCC CCTCTCCTCCTTCGCCTCCACATGCAGCAGAGCCCACCCCAGCCCCTGCCTCTGGGCCCCTCACCCCTCACTTCTCCAAAGAGGAGCAGG CGGAGTCAGGATGGGAGAAGCAGAGGGAGCAGCCACTGGGCGAGCCCCAGCTTGAGGACTAGCTGGGCCCTGTGGACACTCAGGTTATGC AGGACCTGAACTGTCTCCTAGTCCGGGGCTCTGCCTCGTGAGGATCGAGGCCAGCACGTCCCTGCAGGGCACCAAGCATCTGCTGAGCAC >In-frame_KCTD18_ENST00000409157_chr2_201362476_-_SNED1_ENST00000342631_chr2_242007179_+_3359nt ACTTCCGCGTCCGCCCCGCGGCGTCCGGCGGCCGCGCCGAGGGTCTGGCGGGCCGCAGAGGGAGACCAAGACATCATTGTTTTGAAGTTT CTGAAAGTGTTGGGCGGCAAAAATTCAGGTGCCTGGGGGAGAAATGGAAGGCCACAAGGCAGAAGAAGAGGTGCTAGATGTTCTCCGACT GAACGTGGGTGGCTGTATTTACACAGCCCGGCGGGAGTCCTTGTGCCGCTTCAAGGACTCCATGTTGGCATCTATGTTCAGTGGTCGCTT TCCTCTAAAAACAGATGAGTCAGGGGCTTGTGTTATTGACCGTGATGGACGTCTATTTAAATACCTTTTGGATTACCTTCATGGAGAAGT TCAGATTCCCACAGATGAGCAAACCCGCATCGCCCTACAGGAAGAGGCTGATTACTTTGGCATCCCTTATCCATACAGCCTGTCTGACCA TTTGGCCAATGAAATGGAGACATATTCTTTAAGGTCAAATATAGAACTTAAAAAGGCTTTAACAGACTTCTGTGATTCATATGGCTTAGT CTGCAATAAACCAACAGTTTGGGTTCTCCACTATCTTAACACATCTGGTGCAAGCTGTGAGAGTAGAATTATTGGTGTATATGCCACAAA AACTGATGGAACAGACGCTATTGAAAAGCAGCTGGGAGGAAGAATTCACAGCAAAGGCATTTTTAAAAGAGAGGCGGGAAATAATGTTCA GTACATTTGGAGCTATTATTCAGTAGCAGAGTTGAAGAAAATGATGGATGCCTTTGATGCTTGGGAAGGAAAAGGACCCCGCCCTGTGGA AGGCTTCGAGGTCACCAATGTGACGGCTAGCACCATCTCAGTGCAGTGGGCCCTGCACAGGATCCGCCATGCCACCGTCAGTGGGGTCCG TGTGTCCATCCGCCACCCTGAGGCCCTCAGGGACCAGGCCACCGATGTGGACAGGAGTGTGGACAGGTTCACCTTTAGGGCCCTGCTGCC TGGGAAGAGGTACACCATCCAGCTGACCACCCTCAGTGGGCTCAGGGGAGAGGAGCACCCCACAGAGAGCCTGGCCACCGCGCCGACGCA CGTGTGGACCCGGCCCCTGCCTCCAGCAAACCTGACCGCCGCCCGAGTCACTGCCACCTCTGCCCACGTGGTCTGGGATGCCCCGACTCC AGGCAGCTTGCTGGAGGCTTATGTCATCAATGTGACCACCAGCCAGAGCACCAAGAGCCGCTATGTCCCCAACGGGAAGCTGGCGTCCTA CACGGTGCGCGACCTGCTGCCGGGACGGCGGTACCAGCTCTCTGTGATAGCAGTGCAGAGCACGGAGCTCGGGCCGCAGCACAGCGAGCC CGCCCACCTCTACATCATCACCTCCCCCAGGGATGGCGCTGACAGACGCTGGCACCAGGGAGGACACCACCCTCGGGTGCTCAAGAACAG ACCGCCCCCGGCGCGCCTGCCGGAGCTGCGCCTGCTCAATGACCACAGCGCCCCCGAGACCCCCACCCAGCCCCCCAGGTTCTCGGAGCT TGTGGACGGCAGAGGAAGAGTGAGCGCCAGGTTCGGTGGCTCACCCAGCAAAGCAGCCACCGTGAGATCACACGTCCCTGGCAACTGTTC AGAAAACCCCTGTCAGAACGGAGGCACTTGTGTGCCGGGCGCAGACGCCCACAGCTGTGACTGCGGGCCAGGGTTCAAAGGCAGACGCTG CGAGCTCGCCTGTATAAAGGTGTCCCGCCCCTGCACAAGGCTGTTCTCCGAGACAAAGGCCTTTCCAGTCTGGGAGGGAGGCGTCTGTCA CCACGTGTATAAAAGAGTCTACCGAGTTCACCAAGACATCTGCTTCAAAGAGAGCTGTGAAAGCACAAGCCTCAAGAAGACCCCAAACAG GAAACAAAGTAAGAGTCAGACACTGGAGAAATCTTAAGGATTTAAGACGTTCTTGTTACACTCCACCAACCTCACGAGTTTCTAACACCC AGGAAGATGAGGTCTAAAAACTGGATGAAAAAGGACACCCTGAGAAAAGGTCCTAGCTGGAGTCAGTCCCCTCTGTGACCTCTCTCCTCA GGCCTCTAGAGGACAGATGGCCAGGCCTGTGCACACACCAGCCCACCCTGAGAGACCCCTCTGGGACCAACCACCTGTGAGTCCTGCGAT GCGTTTAAGCAGCCTGTGCCCTCACCCAAGCTGCAGTTCCTGAAGGTGTAGTCTGTGTCTCTGCGGATGAGATGACAGCTCGCCATTCCC CGGAATCAGTGAGGCTGTCAGTCAGCCACGCTTCTGCAGTATGCAGAAACCTGTTCTTAGACTCCAAAGCCAGAGAAAGAATTCTCCCTT CGAGGCCCAACAAATTGAGAAGGAACTGTGATGGACCACTTCCAAAACAGAGACGGGGGCAGGGGCTGAAGGGCAGAGACCAGGTGATGT CAGAAGGAAAGCCGGGTTGCAGACACAGCCGCCCCTGCTCTGGTCCTCCAGCGTGTTTATGACGCTCGTGCAGGTCGACGAGCCATCCTA TGGACTAGTTAACACTAAGGTGGAGTTCAGACTTTTTTAGACAACGGCGCGACTGGCAGCCTTTCTCTATCAAGGGTCAGACGGTAAACG TTTTCAGCTTTGCAGACCAGAGGTCCCTGTGGCTACAGTAGCGCAGACACAGCCACAGGCATGTCATTGAATGGCTGCGGCTATGTTCCA ATAAAAACTTATTTACAATAACAGGTGGTGGCCAAATTGGCCCATGGGCCTTATTTGGTGAACCCTGTTCTATGAGATCACCTAGGCTTC AGCCTTAAACAGTGGAAGCCATCCCCTGAATGACAAGTCACAAGGGTATCAAAGAAAGACCCCTGAATTTTCATGGAAAAAGCTATTCAG ACCCCTGCTTGGAAAGCTAAGGCACACTGCCACGAAGCAGCAAGGACGCCTTACAAGTCTCAGTGCAACAGAGATGGACACCTGGGCTGG GCTGGACAATGTTTAAGGTTCCTTTTAGTCCATGACTCAAGTGATACTGTTTTAGGCTATCAGGTAGTAAACACGATCTTAGACATCCCC ATCTTTGTAAGCAGAACAGTACGGCACTTCACCACATCTGCTTCCCACCATGCTTCTAAGCAGCTGTCTTCCCCCTGCTAATGTTACAAC CAAAGCAGCCACCCCACCTCCTCTCGTGTTGAGCCTCACGACCGCTGACCCAGCTGGAAAGCCAGCGCCCTGCCGCGTCACCCTGACTCT GCTCAGAGCCAGCATTCCAGCCACAAAGAGGGCCTCCTTCCTTTCCTCTTTCATAAAAATGTTTTTTGAAGAGTTAGAGTATATTTTAGG >In-frame_KCTD18_ENST00000409157_chr2_201362476_-_SNED1_ENST00000405547_chr2_242007179_+_5770nt ACTTCCGCGTCCGCCCCGCGGCGTCCGGCGGCCGCGCCGAGGGTCTGGCGGGCCGCAGAGGGAGACCAAGACATCATTGTTTTGAAGTTT CTGAAAGTGTTGGGCGGCAAAAATTCAGGTGCCTGGGGGAGAAATGGAAGGCCACAAGGCAGAAGAAGAGGTGCTAGATGTTCTCCGACT GAACGTGGGTGGCTGTATTTACACAGCCCGGCGGGAGTCCTTGTGCCGCTTCAAGGACTCCATGTTGGCATCTATGTTCAGTGGTCGCTT TCCTCTAAAAACAGATGAGTCAGGGGCTTGTGTTATTGACCGTGATGGACGTCTATTTAAATACCTTTTGGATTACCTTCATGGAGAAGT TCAGATTCCCACAGATGAGCAAACCCGCATCGCCCTACAGGAAGAGGCTGATTACTTTGGCATCCCTTATCCATACAGCCTGTCTGACCA TTTGGCCAATGAAATGGAGACATATTCTTTAAGGTCAAATATAGAACTTAAAAAGGCTTTAACAGACTTCTGTGATTCATATGGCTTAGT CTGCAATAAACCAACAGTTTGGGTTCTCCACTATCTTAACACATCTGGTGCAAGCTGTGAGAGTAGAATTATTGGTGTATATGCCACAAA AACTGATGGAACAGACGCTATTGAAAAGCAGCTGGGAGGAAGAATTCACAGCAAAGGCATTTTTAAAAGAGAGGCGGGAAATAATGTTCA GTACATTTGGAGCTATTATTCAGTAGCAGAGTTGAAGAAAATGATGGATGCCTTTGATGCTTGGGAAGGAAAAGGACCCCGCCCTGTGGA AGGCTTCGAGGTCACCAATGTGACGGCTAGCACCATCTCAGTGCAGTGGGCCCTGCACAGGATCCGCCATGCCACCGTCAGTGGGGTCCG TGTGTCCATCCGCCACCCTGAGGCCCTCAGGGACCAGGCCACCGATGTGGACAGGAGTGTGGACAGGTTCACCTTTAGGGCCCTGCTGCC TGGGAAGAGGTACACCATCCAGCTGACCACCCTCAGTGGGCTCAGGGGAGAGGAGCACCCCACAGAGAGCCTGGCCACCGCGCCGACGCA CGTGTGGACCCGGCCCCTGCCTCCAGCAAACCTGACCGCCGCCCGAGTCACTGCCACCTCTGCCCACGTGGTCTGGGATGCCCCGACTCC AGGCAGCTTGCTGGAGGCTTATGTCATCAATGTGACCACCAGCCAGAGCACCAAGAGCCGCTATGTCCCCAACGGGAAGCTGGCGTCCTA CACGGTGCGCGACCTGCTGCCGGGACGGCGGTACCAGCTCTCTGTGATAGCAGTGCAGAGCACGGAGCTCGGGCCGCAGCACAGCGAGCC CGCCCACCTCTACATCATCACCTCCCCCAGGGATGGCGCTGACAGACGCTGGCACCAGGGAGGACACCACCCTCGGGTGCTCAAGAACAG ACCGCCCCCGGCGCGCCTGCCGGAGCTGCGCCTGCTCAATGACCACAGCGCCCCCGAGACCCCCACCCAGCCCCCCAGGTTCTCGGAGCT TGTGGACGGCAGAGGAAGAGTGAGCGCCAGGTTCGGTGGCTCACCCAGCAAAGCAGCCACCGTGAGATCACACGTCCCTGGCAACTGTTC AGAAAACCCCTGTCAGAACGGAGGCACTTGTGTGCCGGGCGCAGACGCCCACAGCTGTGACTGCGGGCCAGGGTTCAAAGGCAGACGCTG CGAGCTCGCCTGTATAAAGGTGTCCCGCCCCTGCACAAGGCTGTTCTCCGAGACAAAGGCCTTTCCAGTCTGGGAGGGAGGCGTCTGTCA CCACGTGAAACAAAGTAAGAGTCAGACACTGGAGAAATCTTAAGGATTTAAGACGTTCTTGTTACACTCCACCAACCTCACGAGTTTCTA ACACCCAGGAAGATGAGGTCTAAAAACTGGATGAAAAAGGACACCCTGAGAAAAGGTCCTAGCTGGAGTCAGTCCCCTCTGTGACCTCTC TCCTCAGGCCTCTAGAGGACAGATGGCCAGGCCTGTGCACACACCAGCCCACCCTGAGAGACCCCTCTGGGACCAACCACCTGTGAGTCC TGCGATGCGTTTAAGCAGCCTGTGCCCTCACCCAAGCTGCAGTTCCTGAAGGTGTAGTCTGTGTCTCTGCGGATGAGATGACAGCTCGCC ATTCCCCGGAATCAGTGAGGCTGTCAGTCAGCCACGCTTCTGCAGTATGCAGAAACCTGTTCTTAGACTCCAAAGCCAGAGAAAGAATTC TCCCTTCGAGGCCCAACAAATTGAGAAGGAACTGTGATGGACCACTTCCAAAACAGAGACGGGGGCAGGGGCTGAAGGGCAGAGACCAGG TGATGTCAGAAGGAAAGCCGGGTTGCAGACACAGCCGCCCCTGCTCTGGTCCTCCAGCGTGTTTATGACGCTCGTGCAGGTCGACGAGCC ATCCTATGGACTAGTTAACACTAAGGTGGAGTTCAGACTTTTTTAGACAACGGCGCGACTGGCAGCCTTTCTCTATCAAGGGTCAGACGG TAAACGTTTTCAGCTTTGCAGACCAGAGGTCCCTGTGGCTACAGTAGCGCAGACACAGCCACAGGCATGTCATTGAATGGCTGCGGCTAT GTTCCAATAAAAACTTATTTACAATAACAGGTGGTGGCCAAATTGGCCCATGGGCCTTATTTGGTGAACCCTGTTCTATGAGATCACCTA GGCTTCAGCCTTAAACAGTGGAAGCCATCCCCTGAATGACAAGTCACAAGGGTATCAAAGAAAGACCCCTGAATTTTCATGGAAAAAGCT ATTCAGACCCCTGCTTGGAAAGCTAAGGCACACTGCCACGAAGCAGCAAGGACGCCTTACAAGTCTCAGTGCAACAGAGATGGACACCTG GGCTGGGCTGGACAATGTTTAAGGTTCCTTTTAGTCCATGACTCAAGTGATACTGTTTTAGGCTATCAGGTAGTAAACACGATCTTAGAC ATCCCCATCTTTGTAAGCAGAACAGTACGGCACTTCACCACATCTGCTTCCCACCATGCTTCTAAGCAGCTGTCTTCCCCCTGCTAATGT TACAACCAAAGCAGCCACCCCACCTCCTCTCGTGTTGAGCCTCACGACCGCTGACCCAGCTGGAAAGCCAGCGCCCTGCCGCGTCACCCT GACTCTGCTCAGAGCCAGCATTCCAGCCACAAAGAGGGCCTCCTTCCTTTCCTCTTTCATAAAAATGTTTTTTGAAGAGTTAGAGTATAT TTTAGGCTTTTTATCTTTATTAAAATTTCATGTGCATGTGTCTGTGTATTCTGCAATTTGTCATTTTCAGAAAGAAGGAACAGGCAATTC GCGAAGTTTCACCTGTACTCCCGAGCTGTTCCCCAGGCTCCAGACCCACTTGAGAGCAGAAGGTGGAGCTCAATGAAGGGTCTCGAGCTC AGCGAAGGGTCACTGGGTGAACTGAGAGAAACCACGTTCACAAACGCGTACTGCGGACTTCCTGCCGCCCTGGGACCTGTCACTGTTTGT CCATGTAAGCTACAGCATTACTAGCAGATGCTAAGATCGAGTGATATCACTGGAAAAGTAGGTGAATCCTACTAGGAAACTTTCTACTCC CTACTAGGACCTCAAGCCCCTCAGCCACACAGCAAATGCTAATATGCTCCAGTGTTAGCTTAGAAGCCTTGTGTCAACAAGAACTGGCTC CTGAGTCCCAAGCTTGGTGCCACACAGCAAATGCTAATATGCTCCAGTGTTAGCTTAGAAGCCTTGTGTCAACAAGAACTGGCTCCTGAG TCCCAAGCTTGGTGCCACACAGCAAATGCTAATATGCTCCAGTGTTAGCTTAGAAGCCTTGTGTCAACAAGAACTGGCTCCTGAGTCCCA AGTGCTGTCACAGGACTTGCCCATTGGGATGTTTTCCACATTAAATATCAAGTAAAAAGACTTCCTGGTGCTCAGGAATTACAGTTCGTT CTTGAAACATTCCAAAGAGGCCACCACAGCTTTTCCCATGTGGCTTCTTTTAAAAACTCAAATGGCTTCCTTGAAAATACTCAAAGTCCA CCCAAGGAAATTAGTAATAATAGAATCAGAAAACTGTCAGGAGCATAAAGATTTCTGTATCAAAATGAAAGAAGCAATCCTGAGTTGCTG AATTACCCATCTGCTAATGAAACCGGGATGGACTGATCATCTAACCAAGTGCAGACTGAGGATTCTACTTAGTCCTCCGACTGGGTACAA CAACAGCCTAGGTTCTAGGGAGGGTGGCAGTGACCGGGATGCCACAATGGAAGAGAAAATGAAAACACTGGCACAGTGAAATGTCTCATT TCCAAACAGTTTTGCCTATGGCCAAGCAAGGCAATAAAGACAAACTCTCCCTTTTCCCCATTGCGTGTGGGCTGCCAGGTACAAGTAAGG GAATCTTTGCTGTGCCCACTGTCCTCCAGTAGAGAACCCAACAGGCAAGGGCCCCACTCAGGTATCAGCTCACCTCCTGCACCTCCCCTT AGCAGGAACTCCTTCCACTGGCAAAGGACTGCCACTGCCATCTGACTCAACTGTGGCGATGTGGACGGAGTCACCGAGCTGCTTTTCTTT TGCAAAACAAAAGTCTTTTTCTTTGCAGTCACGCTGTAAGACGAGGCTGCTGGAGAAAACAAAAGCACCTAGATTTCAGTGCTGAATCCC CACAATTGCATGCAGCTCACACCTACCAGGGGTATTCCAGTGCATAGGGGAAAGGAACCCGGCTGAAAAACCAGCTCCTTATTTTTCTTT TAAATAAAATAATACGATCCTAAGTCCATTTACCATCTGAAGTTGTCACGAGTGAACAGTCACATTACTGTTGTGGACCAGGCCTTAGAT GAGTTTCTCAGGCTCAGCACTGACATTCTGGGCCGGATCATCCTCTCTTGTGGGACCATCCTGTGCACTGCAGGATGTTTCACAGCACCC CTGGCCTCTACCCACTAGAATCCTACAATCTACCAGATCCTAGGATCTAGTTGATCCTAGAATGCTACCAAGGAGACTTGAATTTTGGTC CCATCATCAAAAATGCCTTCTGCATCAATCCTATGCCAGTTTCCCCTAAAAGAGGGCTAACTGGAATGTTCTAGGATGTACCAATCCTCC AGGACCCTCTTAGAGCTCATGCCATCAGAGACAGGCCTCTATCTCAGGGATCACCCCGGCTGACATCAAATTCCTCTTCTCTTTTCCCAA CATTTCAAATTGTTCTTCGGACTCATTGAGTTCCCTAAGGTGACACGCCCCCCCCCCCCCCCACACCCACCTTGGGGGGTCACGGATTGC TCCCTGTGGCCCTGGCTTCAGCCCACCTGCTCCATGACCCTATGCTCTTCTCCTCTGGTTCTCGAAGCTGTCTGTAACCAGGGCAGGGGA GATAACTGTATGGGACCATTCCCTGGCCTCCACCTGCCCCAGCACTCTCCAGGCCAGCACAGTCTGGCACTACAGACTACAGGGCCGGAG ACACCAGGCTTGGAAGTGACCACTGGCCAAGAGCTGACATAAAAGCCAACTTCCCCAAACAGGAAGGGCCTGTTCTTCACAAAGATAAAG AAAACTGCCAGCATTTTGCTGGCCTTAAGAAGCCATGCAAAATTAACCAGTACATCATGAATTAACTTCTTTTACTCTGCTGTGCACTGA ATACCATTATGAAGCAATATACTTTTGGATTAAAAATAAGCATTTTTGTGGAAAATCTGCTACATGTTTTCATAAAATAAAGTGCTATGA >In-frame_KCTD18_ENST00000409157_chr2_201362476_-_SNED1_ENST00000310397_chr2_242007179_+_5958nt ACTTCCGCGTCCGCCCCGCGGCGTCCGGCGGCCGCGCCGAGGGTCTGGCGGGCCGCAGAGGGAGACCAAGACATCATTGTTTTGAAGTTT CTGAAAGTGTTGGGCGGCAAAAATTCAGGTGCCTGGGGGAGAAATGGAAGGCCACAAGGCAGAAGAAGAGGTGCTAGATGTTCTCCGACT GAACGTGGGTGGCTGTATTTACACAGCCCGGCGGGAGTCCTTGTGCCGCTTCAAGGACTCCATGTTGGCATCTATGTTCAGTGGTCGCTT TCCTCTAAAAACAGATGAGTCAGGGGCTTGTGTTATTGACCGTGATGGACGTCTATTTAAATACCTTTTGGATTACCTTCATGGAGAAGT TCAGATTCCCACAGATGAGCAAACCCGCATCGCCCTACAGGAAGAGGCTGATTACTTTGGCATCCCTTATCCATACAGCCTGTCTGACCA TTTGGCCAATGAAATGGAGACATATTCTTTAAGGTCAAATATAGAACTTAAAAAGGCTTTAACAGACTTCTGTGATTCATATGGCTTAGT CTGCAATAAACCAACAGTTTGGGTTCTCCACTATCTTAACACATCTGGTGCAAGCTGTGAGAGTAGAATTATTGGTGTATATGCCACAAA AACTGATGGAACAGACGCTATTGAAAAGCAGCTGGGAGGAAGAATTCACAGCAAAGGCATTTTTAAAAGAGAGGCGGGAAATAATGTTCA GTACATTTGGAGCTATTATTCAGTAGCAGAGTTGAAGAAAATGATGGATGCCTTTGATGCTTGGGAAGGAAAAGGACCCCGCCCTGTGGA AGGCTTCGAGGTCACCAATGTGACGGCTAGCACCATCTCAGTGCAGTGGGCCCTGCACAGGATCCGCCATGCCACCGTCAGTGGGGTCCG TGTGTCCATCCGCCACCCTGAGGCCCTCAGGGACCAGGCCACCGATGTGGACAGGAGTGTGGACAGGTTCACCTTTAGGGCCCTGCTGCC TGGGAAGAGGTACACCATCCAGCTGACCACCCTCAGTGGGCTCAGGGGAGAGGAGCACCCCACAGAGAGCCTGGCCACCGCGCCGACGCA CGTGTGGACCCGGCCCCTGCCTCCAGCAAACCTGACCGCCGCCCGAGTCACTGCCACCTCTGCCCACGTGGTCTGGGATGCCCCGACTCC AGGCAGCTTGCTGGAGGCTTATGTCATCAATGTGACCACCAGCCAGAGCACCAAGAGCCGCTATGTCCCCAACGGGAAGCTGGCGTCCTA CACGGTGCGCGACCTGCTGCCGGGACGGCGGTACCAGCTCTCTGTGATAGCAGTGCAGAGCACGGAGCTCGGGCCGCAGCACAGCGAGCC CGCCCACCTCTACATCATCACCTCCCCCAGGGATGGCGCTGACAGACGCTGGCACCAGGGAGGACACCACCCTCGGGTGCTCAAGAACAG ACCGCCCCCGGCGCGCCTGCCGGAGCTGCGCCTGCTCAATGACCACAGCGCCCCCGAGACCCCCACCCAGCCCCCCAGGTTCTCGGAGCT TGTGGACGGCAGAGGAAGAGTGAGCGCCAGGTTCGGTGGCTCACCCAGCAAAGCAGCCACCGTGAGATCACAACCCACAGCCTCGGCGCA GCTCGAGAACATGGAGGAAGCCCCCAAGCGGGTCAGCCTGGCCCTCCAGCTCCCTGAACACGGCAGCAAGGACATCGGAAACGTCCCTGG CAACTGTTCAGAAAACCCCTGTCAGAACGGAGGCACTTGTGTGCCGGGCGCAGACGCCCACAGCTGTGACTGCGGGCCAGGGTTCAAAGG CAGACGCTGCGAGCTCGCCTGTATAAAGGTGTCCCGCCCCTGCACAAGGCTGTTCTCCGAGACAAAGGCCTTTCCAGTCTGGGAGGGAGG CGTCTGTCACCACGTGTATAAAAGAGTCTACCGAGTTCACCAAGACATCTGCTTCAAAGAGAGCTGTGAAAGCACAAGCCTCAAGAAGAC CCCAAACAGGAAACAAAGTAAGAGTCAGACACTGGAGAAATCTTAAGGATTTAAGACGTTCTTGTTACACTCCACCAACCTCACGAGTTT CTAACACCCAGGAAGATGAGGTCTAAAAACTGGATGAAAAAGGACACCCTGAGAAAAGGTCCTAGCTGGAGTCAGTCCCCTCTGTGACCT CTCTCCTCAGGCCTCTAGAGGACAGATGGCCAGGCCTGTGCACACACCAGCCCACCCTGAGAGACCCCTCTGGGACCAACCACCTGTGAG TCCTGCGATGCGTTTAAGCAGCCTGTGCCCTCACCCAAGCTGCAGTTCCTGAAGGTGTAGTCTGTGTCTCTGCGGATGAGATGACAGCTC GCCATTCCCCGGAATCAGTGAGGCTGTCAGTCAGCCACGCTTCTGCAGTATGCAGAAACCTGTTCTTAGACTCCAAAGCCAGAGAAAGAA TTCTCCCTTCGAGGCCCAACAAATTGAGAAGGAACTGTGATGGACCACTTCCAAAACAGAGACGGGGGCAGGGGCTGAAGGGCAGAGACC AGGTGATGTCAGAAGGAAAGCCGGGTTGCAGACACAGCCGCCCCTGCTCTGGTCCTCCAGCGTGTTTATGACGCTCGTGCAGGTCGACGA GCCATCCTATGGACTAGTTAACACTAAGGTGGAGTTCAGACTTTTTTAGACAACGGCGCGACTGGCAGCCTTTCTCTATCAAGGGTCAGA CGGTAAACGTTTTCAGCTTTGCAGACCAGAGGTCCCTGTGGCTACAGTAGCGCAGACACAGCCACAGGCATGTCATTGAATGGCTGCGGC TATGTTCCAATAAAAACTTATTTACAATAACAGGTGGTGGCCAAATTGGCCCATGGGCCTTATTTGGTGAACCCTGTTCTATGAGATCAC CTAGGCTTCAGCCTTAAACAGTGGAAGCCATCCCCTGAATGACAAGTCACAAGGGTATCAAAGAAAGACCCCTGAATTTTCATGGAAAAA GCTATTCAGACCCCTGCTTGGAAAGCTAAGGCACACTGCCACGAAGCAGCAAGGACGCCTTACAAGTCTCAGTGCAACAGAGATGGACAC CTGGGCTGGGCTGGACAATGTTTAAGGTTCCTTTTAGTCCATGACTCAAGTGATACTGTTTTAGGCTATCAGGTAGTAAACACGATCTTA GACATCCCCATCTTTGTAAGCAGAACAGTACGGCACTTCACCACATCTGCTTCCCACCATGCTTCTAAGCAGCTGTCTTCCCCCTGCTAA TGTTACAACCAAAGCAGCCACCCCACCTCCTCTCGTGTTGAGCCTCACGACCGCTGACCCAGCTGGAAAGCCAGCGCCCTGCCGCGTCAC CCTGACTCTGCTCAGAGCCAGCATTCCAGCCACAAAGAGGGCCTCCTTCCTTTCCTCTTTCATAAAAATGTTTTTTGAAGAGTTAGAGTA TATTTTAGGCTTTTTATCTTTATTAAAATTTCATGTGCATGTGTCTGTGTATTCTGCAATTTGTCATTTTCAGAAAGAAGGAACAGGCAA TTCGCGAAGTTTCACCTGTACTCCCGAGCTGTTCCCCAGGCTCCAGACCCACTTGAGAGCAGAAGGTGGAGCTCAATGAAGGGTCTCGAG CTCAGCGAAGGGTCACTGGGTGAACTGAGAGAAACCACGTTCACAAACGCGTACTGCGGACTTCCTGCCGCCCTGGGACCTGTCACTGTT TGTCCATGTAAGCTACAGCATTACTAGCAGATGCTAAGATCGAGTGATATCACTGGAAAAGTAGGTGAATCCTACTAGGAAACTTTCTAC TCCCTACTAGGACCTCAAGCCCCTCAGCCACACAGCAAATGCTAATATGCTCCAGTGTTAGCTTAGAAGCCTTGTGTCAACAAGAACTGG CTCCTGAGTCCCAAGCTTGGTGCCACACAGCAAATGCTAATATGCTCCAGTGTTAGCTTAGAAGCCTTGTGTCAACAAGAACTGGCTCCT GAGTCCCAAGCTTGGTGCCACACAGCAAATGCTAATATGCTCCAGTGTTAGCTTAGAAGCCTTGTGTCAACAAGAACTGGCTCCTGAGTC CCAAGTGCTGTCACAGGACTTGCCCATTGGGATGTTTTCCACATTAAATATCAAGTAAAAAGACTTCCTGGTGCTCAGGAATTACAGTTC GTTCTTGAAACATTCCAAAGAGGCCACCACAGCTTTTCCCATGTGGCTTCTTTTAAAAACTCAAATGGCTTCCTTGAAAATACTCAAAGT CCACCCAAGGAAATTAGTAATAATAGAATCAGAAAACTGTCAGGAGCATAAAGATTTCTGTATCAAAATGAAAGAAGCAATCCTGAGTTG CTGAATTACCCATCTGCTAATGAAACCGGGATGGACTGATCATCTAACCAAGTGCAGACTGAGGATTCTACTTAGTCCTCCGACTGGGTA CAACAACAGCCTAGGTTCTAGGGAGGGTGGCAGTGACCGGGATGCCACAATGGAAGAGAAAATGAAAACACTGGCACAGTGAAATGTCTC ATTTCCAAACAGTTTTGCCTATGGCCAAGCAAGGCAATAAAGACAAACTCTCCCTTTTCCCCATTGCGTGTGGGCTGCCAGGTACAAGTA AGGGAATCTTTGCTGTGCCCACTGTCCTCCAGTAGAGAACCCAACAGGCAAGGGCCCCACTCAGGTATCAGCTCACCTCCTGCACCTCCC CTTAGCAGGAACTCCTTCCACTGGCAAAGGACTGCCACTGCCATCTGACTCAACTGTGGCGATGTGGACGGAGTCACCGAGCTGCTTTTC TTTTGCAAAACAAAAGTCTTTTTCTTTGCAGTCACGCTGTAAGACGAGGCTGCTGGAGAAAACAAAAGCACCTAGATTTCAGTGCTGAAT CCCCACAATTGCATGCAGCTCACACCTACCAGGGGTATTCCAGTGCATAGGGGAAAGGAACCCGGCTGAAAAACCAGCTCCTTATTTTTC TTTTAAATAAAATAATACGATCCTAAGTCCATTTACCATCTGAAGTTGTCACGAGTGAACAGTCACATTACTGTTGTGGACCAGGCCTTA GATGAGTTTCTCAGGCTCAGCACTGACATTCTGGGCCGGATCATCCTCTCTTGTGGGACCATCCTGTGCACTGCAGGATGTTTCACAGCA CCCCTGGCCTCTACCCACTAGAATCCTACAATCTACCAGATCCTAGGATCTAGTTGATCCTAGAATGCTACCAAGGAGACTTGAATTTTG GTCCCATCATCAAAAATGCCTTCTGCATCAATCCTATGCCAGTTTCCCCTAAAAGAGGGCTAACTGGAATGTTCTAGGATGTACCAATCC TCCAGGACCCTCTTAGAGCTCATGCCATCAGAGACAGGCCTCTATCTCAGGGATCACCCCGGCTGACATCAAATTCCTCTTCTCTTTTCC CAACATTTCAAATTGTTCTTCGGACTCATTGAGTTCCCTAAGGTGACACGCCCCCCCCCCCCCCCACACCCACCTTGGGGGGTCACGGAT TGCTCCCTGTGGCCCTGGCTTCAGCCCACCTGCTCCATGACCCTATGCTCTTCTCCTCTGGTTCTCGAAGCTGTCTGTAACCAGGGCAGG GGAGATAACTGTATGGGACCATTCCCTGGCCTCCACCTGCCCCAGCACTCTCCAGGCCAGCACAGTCTGGCACTACAGACTACAGGGCCG GAGACACCAGGCTTGGAAGTGACCACTGGCCAAGAGCTGACATAAAAGCCAACTTCCCCAAACAGGAAGGGCCTGTTCTTCACAAAGATA AAGAAAACTGCCAGCATTTTGCTGGCCTTAAGAAGCCATGCAAAATTAACCAGTACATCATGAATTAACTTCTTTTACTCTGCTGTGCAC TGAATACCATTATGAAGCAATATACTTTTGGATTAAAAATAAGCATTTTTGTGGAAAATCTGCTACATGTTTTCATAAAATAAAGTGCTA |
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FusionGenePPI for KCTD18_SNED1 |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
| Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
| Hgene | Hgene's interactors | Tgene | Tgene's interactors |
| KCTD18 | CUL3, COPS5, COPS6, APP, LRP1 | SNED1 |
| - Retained PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| - Lost PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
| - Retained PPIs, but lost function due to frame-shift fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for KCTD18_SNED1 |
| Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
| Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for KCTD18_SNED1 |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
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