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Fusion gene ID: 1830 |
FusionGeneSummary for ANKRD28_COLQ |
Fusion gene summary |
Fusion gene information | Fusion gene name: ANKRD28_COLQ | Fusion gene ID: 1830 | Hgene | Tgene | Gene symbol | ANKRD28 | COLQ | Gene ID | 23243 | 8292 |
Gene name | ankyrin repeat domain 28 | collagen like tail subunit of asymmetric acetylcholinesterase | |
Synonyms | PITK|PPP1R65 | CMS5|EAD | |
Cytomap | 3p25.1 | 3p25.1 | |
Type of gene | protein-coding | protein-coding | |
Description | serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit APP6-ARS-Aankyrin repeat domain-containing protein 28phosphatase interactor targeting K proteinphosphatase interactor targeting protein hnRNP Kprotein phosphatase 1, regulatory | acetylcholinesterase collagenic tail peptideAChE Q subunitacetylcholinesterase-associated collagencollagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterasecollagenic tail of endplate acetylcholinesterasesingle strand | |
Modification date | 20180519 | 20180523 | |
UniProtAcc | O15084 | Q9Y215 | |
Ensembl transtripts involved in fusion gene | ENST00000383777, ENST00000399451, ENST00000497037, | ENST00000435459, ENST00000383787, ENST00000383785, ENST00000383788, ENST00000603752, ENST00000383781, ENST00000603808, ENST00000383786, | |
Fusion gene scores | * DoF score | 11 X 10 X 10=1100 | 4 X 4 X 5=80 |
# samples | 12 | 5 | |
** MAII score | log2(12/1100*10)=-3.1963972128035 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(5/80*10)=-0.678071905112638 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: ANKRD28 [Title/Abstract] AND COLQ [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | LD | ESCA | TCGA-R6-A8W5-01B | ANKRD28 | chr3 | 15900884 | - | COLQ | chr3 | 15531144 | - |
TCGA | LD | LIHC | TCGA-DD-AAEE-01A | ANKRD28 | chr3 | 15793257 | - | COLQ | chr3 | 15507944 | - |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
intron-3CDS | ENST00000383777 | ENST00000435459 | ANKRD28 | chr3 | 15900884 | - | COLQ | chr3 | 15531144 | - |
intron-3CDS | ENST00000383777 | ENST00000383787 | ANKRD28 | chr3 | 15900884 | - | COLQ | chr3 | 15531144 | - |
intron-3CDS | ENST00000383777 | ENST00000383785 | ANKRD28 | chr3 | 15900884 | - | COLQ | chr3 | 15531144 | - |
intron-3CDS | ENST00000383777 | ENST00000383788 | ANKRD28 | chr3 | 15900884 | - | COLQ | chr3 | 15531144 | - |
intron-intron | ENST00000383777 | ENST00000603752 | ANKRD28 | chr3 | 15900884 | - | COLQ | chr3 | 15531144 | - |
intron-intron | ENST00000383777 | ENST00000383781 | ANKRD28 | chr3 | 15900884 | - | COLQ | chr3 | 15531144 | - |
intron-intron | ENST00000383777 | ENST00000603808 | ANKRD28 | chr3 | 15900884 | - | COLQ | chr3 | 15531144 | - |
intron-intron | ENST00000383777 | ENST00000383786 | ANKRD28 | chr3 | 15900884 | - | COLQ | chr3 | 15531144 | - |
Frame-shift | ENST00000399451 | ENST00000435459 | ANKRD28 | chr3 | 15900884 | - | COLQ | chr3 | 15531144 | - |
Frame-shift | ENST00000399451 | ENST00000383787 | ANKRD28 | chr3 | 15900884 | - | COLQ | chr3 | 15531144 | - |
In-frame | ENST00000399451 | ENST00000383785 | ANKRD28 | chr3 | 15900884 | - | COLQ | chr3 | 15531144 | - |
Frame-shift | ENST00000399451 | ENST00000383788 | ANKRD28 | chr3 | 15900884 | - | COLQ | chr3 | 15531144 | - |
5CDS-intron | ENST00000399451 | ENST00000603752 | ANKRD28 | chr3 | 15900884 | - | COLQ | chr3 | 15531144 | - |
5CDS-intron | ENST00000399451 | ENST00000383781 | ANKRD28 | chr3 | 15900884 | - | COLQ | chr3 | 15531144 | - |
5CDS-intron | ENST00000399451 | ENST00000603808 | ANKRD28 | chr3 | 15900884 | - | COLQ | chr3 | 15531144 | - |
5CDS-intron | ENST00000399451 | ENST00000383786 | ANKRD28 | chr3 | 15900884 | - | COLQ | chr3 | 15531144 | - |
intron-3CDS | ENST00000497037 | ENST00000435459 | ANKRD28 | chr3 | 15900884 | - | COLQ | chr3 | 15531144 | - |
intron-3CDS | ENST00000497037 | ENST00000383787 | ANKRD28 | chr3 | 15900884 | - | COLQ | chr3 | 15531144 | - |
intron-3CDS | ENST00000497037 | ENST00000383785 | ANKRD28 | chr3 | 15900884 | - | COLQ | chr3 | 15531144 | - |
intron-3CDS | ENST00000497037 | ENST00000383788 | ANKRD28 | chr3 | 15900884 | - | COLQ | chr3 | 15531144 | - |
intron-intron | ENST00000497037 | ENST00000603752 | ANKRD28 | chr3 | 15900884 | - | COLQ | chr3 | 15531144 | - |
intron-intron | ENST00000497037 | ENST00000383781 | ANKRD28 | chr3 | 15900884 | - | COLQ | chr3 | 15531144 | - |
intron-intron | ENST00000497037 | ENST00000603808 | ANKRD28 | chr3 | 15900884 | - | COLQ | chr3 | 15531144 | - |
intron-intron | ENST00000497037 | ENST00000383786 | ANKRD28 | chr3 | 15900884 | - | COLQ | chr3 | 15531144 | - |
In-frame | ENST00000383777 | ENST00000435459 | ANKRD28 | chr3 | 15793257 | - | COLQ | chr3 | 15507944 | - |
In-frame | ENST00000383777 | ENST00000383787 | ANKRD28 | chr3 | 15793257 | - | COLQ | chr3 | 15507944 | - |
Frame-shift | ENST00000383777 | ENST00000383785 | ANKRD28 | chr3 | 15793257 | - | COLQ | chr3 | 15507944 | - |
In-frame | ENST00000383777 | ENST00000383788 | ANKRD28 | chr3 | 15793257 | - | COLQ | chr3 | 15507944 | - |
5CDS-intron | ENST00000383777 | ENST00000603752 | ANKRD28 | chr3 | 15793257 | - | COLQ | chr3 | 15507944 | - |
5CDS-intron | ENST00000383777 | ENST00000383781 | ANKRD28 | chr3 | 15793257 | - | COLQ | chr3 | 15507944 | - |
5CDS-intron | ENST00000383777 | ENST00000603808 | ANKRD28 | chr3 | 15793257 | - | COLQ | chr3 | 15507944 | - |
5CDS-intron | ENST00000383777 | ENST00000383786 | ANKRD28 | chr3 | 15793257 | - | COLQ | chr3 | 15507944 | - |
In-frame | ENST00000399451 | ENST00000435459 | ANKRD28 | chr3 | 15793257 | - | COLQ | chr3 | 15507944 | - |
In-frame | ENST00000399451 | ENST00000383787 | ANKRD28 | chr3 | 15793257 | - | COLQ | chr3 | 15507944 | - |
Frame-shift | ENST00000399451 | ENST00000383785 | ANKRD28 | chr3 | 15793257 | - | COLQ | chr3 | 15507944 | - |
In-frame | ENST00000399451 | ENST00000383788 | ANKRD28 | chr3 | 15793257 | - | COLQ | chr3 | 15507944 | - |
5CDS-intron | ENST00000399451 | ENST00000603752 | ANKRD28 | chr3 | 15793257 | - | COLQ | chr3 | 15507944 | - |
5CDS-intron | ENST00000399451 | ENST00000383781 | ANKRD28 | chr3 | 15793257 | - | COLQ | chr3 | 15507944 | - |
5CDS-intron | ENST00000399451 | ENST00000603808 | ANKRD28 | chr3 | 15793257 | - | COLQ | chr3 | 15507944 | - |
5CDS-intron | ENST00000399451 | ENST00000383786 | ANKRD28 | chr3 | 15793257 | - | COLQ | chr3 | 15507944 | - |
5UTR-3CDS | ENST00000497037 | ENST00000435459 | ANKRD28 | chr3 | 15793257 | - | COLQ | chr3 | 15507944 | - |
5UTR-3CDS | ENST00000497037 | ENST00000383787 | ANKRD28 | chr3 | 15793257 | - | COLQ | chr3 | 15507944 | - |
5UTR-3CDS | ENST00000497037 | ENST00000383785 | ANKRD28 | chr3 | 15793257 | - | COLQ | chr3 | 15507944 | - |
5UTR-3CDS | ENST00000497037 | ENST00000383788 | ANKRD28 | chr3 | 15793257 | - | COLQ | chr3 | 15507944 | - |
5UTR-intron | ENST00000497037 | ENST00000603752 | ANKRD28 | chr3 | 15793257 | - | COLQ | chr3 | 15507944 | - |
5UTR-intron | ENST00000497037 | ENST00000383781 | ANKRD28 | chr3 | 15793257 | - | COLQ | chr3 | 15507944 | - |
5UTR-intron | ENST00000497037 | ENST00000603808 | ANKRD28 | chr3 | 15793257 | - | COLQ | chr3 | 15507944 | - |
5UTR-intron | ENST00000497037 | ENST00000383786 | ANKRD28 | chr3 | 15793257 | - | COLQ | chr3 | 15507944 | - |
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FusionProtFeatures for ANKRD28_COLQ |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
ANKRD28 | COLQ |
Putative regulatory subunit of protein phosphatase 6(PP6) that may be involved in the recognition of phosphoproteinsubstrates. Involved in the PP6-mediated dephosphorylation ofNFKBIE opposing its degradation in response to TNF-alpha.Selectively inhibits the phosphatase activity of PPP1C. TargetsPPP1C to modulate HNRPK phosphorylation.{ECO:0000269|PubMed:16564677, ECO:0000269|PubMed:18186651}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | ANKRD28 | chr3:15793257 | chr3:15507944 | ENST00000383777 | - | 4 | 28 | 40_69 | 120 | 1087 | Repeat | Note=ANK 1 |
Hgene | ANKRD28 | chr3:15793257 | chr3:15507944 | ENST00000383777 | - | 4 | 28 | 73_102 | 120 | 1087 | Repeat | Note=ANK 2 |
Hgene | ANKRD28 | chr3:15793257 | chr3:15507944 | ENST00000399451 | - | 4 | 28 | 40_69 | 87 | 1054 | Repeat | Note=ANK 1 |
Tgene | >COLQ | chr3:15793257 | chr3:15507944 | ENST00000383781 | - | 10 | 17 | 277_291 | 229 | 446 | Domain | Note=Collagen-like 2 |
Tgene | >COLQ | chr3:15793257 | chr3:15507944 | ENST00000383786 | - | 9 | 16 | 277_291 | 205 | 422 | Domain | Note=Collagen-like 2 |
Tgene | >COLQ | chr3:15793257 | chr3:15507944 | ENST00000383787 | - | 9 | 16 | 277_291 | 230 | 447 | Domain | Note=Collagen-like 2 |
Tgene | >COLQ | chr3:15793257 | chr3:15507944 | ENST00000383788 | - | 10 | 17 | 277_291 | 239 | 456 | Domain | Note=Collagen-like 2 |
Tgene | >COLQ | chr3:15793257 | chr3:15507944 | ENST00000603808 | - | 10 | 17 | 277_291 | 239 | 457 | Domain | Note=Collagen-like 2 |
Tgene | >COLQ | chr3:15793257 | chr3:15507944 | ENST00000383781 | - | 10 | 17 | 235_238 | 229 | 446 | Region | Heparan sulfate proteoglycan binding |
Tgene | >COLQ | chr3:15793257 | chr3:15507944 | ENST00000383786 | - | 9 | 16 | 235_238 | 205 | 422 | Region | Heparan sulfate proteoglycan binding |
Tgene | >COLQ | chr3:15793257 | chr3:15507944 | ENST00000383787 | - | 9 | 16 | 235_238 | 230 | 447 | Region | Heparan sulfate proteoglycan binding |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | >ANKRD28 | chr3:15793257 | chr3:15507944 | ENST00000383777 | - | 4 | 28 | 106_135 | 120 | 1087 | Repeat | Note=ANK 3 |
Hgene | >ANKRD28 | chr3:15793257 | chr3:15507944 | ENST00000383777 | - | 4 | 28 | 139_168 | 120 | 1087 | Repeat | Note=ANK 4 |
Hgene | >ANKRD28 | chr3:15793257 | chr3:15507944 | ENST00000383777 | - | 4 | 28 | 172_201 | 120 | 1087 | Repeat | Note=ANK 5 |
Hgene | >ANKRD28 | chr3:15793257 | chr3:15507944 | ENST00000383777 | - | 4 | 28 | 205_234 | 120 | 1087 | Repeat | Note=ANK 6 |
Hgene | >ANKRD28 | chr3:15793257 | chr3:15507944 | ENST00000383777 | - | 4 | 28 | 238_267 | 120 | 1087 | Repeat | Note=ANK 7 |
Hgene | >ANKRD28 | chr3:15793257 | chr3:15507944 | ENST00000383777 | - | 4 | 28 | 271_301 | 120 | 1087 | Repeat | Note=ANK 8 |
Hgene | >ANKRD28 | chr3:15793257 | chr3:15507944 | ENST00000383777 | - | 4 | 28 | 305_334 | 120 | 1087 | Repeat | Note=ANK 9 |
Hgene | >ANKRD28 | chr3:15793257 | chr3:15507944 | ENST00000383777 | - | 4 | 28 | 338_367 | 120 | 1087 | Repeat | Note=ANK 10 |
Hgene | >ANKRD28 | chr3:15793257 | chr3:15507944 | ENST00000383777 | - | 4 | 28 | 371_400 | 120 | 1087 | Repeat | Note=ANK 11 |
Hgene | >ANKRD28 | chr3:15793257 | chr3:15507944 | ENST00000383777 | - | 4 | 28 | 404_433 | 120 | 1087 | Repeat | Note=ANK 12 |
Hgene | >ANKRD28 | chr3:15793257 | chr3:15507944 | ENST00000383777 | - | 4 | 28 | 437_466 | 120 | 1087 | Repeat | Note=ANK 13 |
Hgene | >ANKRD28 | chr3:15793257 | chr3:15507944 | ENST00000383777 | - | 4 | 28 | 470_500 | 120 | 1087 | Repeat | Note=ANK 14 |
Hgene | >ANKRD28 | chr3:15793257 | chr3:15507944 | ENST00000383777 | - | 4 | 28 | 504_534 | 120 | 1087 | Repeat | Note=ANK 15 |
Hgene | >ANKRD28 | chr3:15793257 | chr3:15507944 | ENST00000383777 | - | 4 | 28 | 549_578 | 120 | 1087 | Repeat | Note=ANK 16 |
Hgene | >ANKRD28 | chr3:15793257 | chr3:15507944 | ENST00000383777 | - | 4 | 28 | 582_611 | 120 | 1087 | Repeat | Note=ANK 17 |
Hgene | >ANKRD28 | chr3:15793257 | chr3:15507944 | ENST00000383777 | - | 4 | 28 | 616_645 | 120 | 1087 | Repeat | Note=ANK 18 |
Hgene | >ANKRD28 | chr3:15793257 | chr3:15507944 | ENST00000383777 | - | 4 | 28 | 652_681 | 120 | 1087 | Repeat | Note=ANK 19 |
Hgene | >ANKRD28 | chr3:15793257 | chr3:15507944 | ENST00000383777 | - | 4 | 28 | 685_714 | 120 | 1087 | Repeat | Note=ANK 20 |
Hgene | >ANKRD28 | chr3:15793257 | chr3:15507944 | ENST00000383777 | - | 4 | 28 | 718_747 | 120 | 1087 | Repeat | Note=ANK 21 |
Hgene | >ANKRD28 | chr3:15793257 | chr3:15507944 | ENST00000383777 | - | 4 | 28 | 755_784 | 120 | 1087 | Repeat | Note=ANK 22 |
Hgene | >ANKRD28 | chr3:15793257 | chr3:15507944 | ENST00000383777 | - | 4 | 28 | 787_817 | 120 | 1087 | Repeat | Note=ANK 23 |
Hgene | >ANKRD28 | chr3:15793257 | chr3:15507944 | ENST00000383777 | - | 4 | 28 | 822_851 | 120 | 1087 | Repeat | Note=ANK 24 |
Hgene | >ANKRD28 | chr3:15793257 | chr3:15507944 | ENST00000383777 | - | 4 | 28 | 855_885 | 120 | 1087 | Repeat | Note=ANK 25 |
Hgene | >ANKRD28 | chr3:15793257 | chr3:15507944 | ENST00000383777 | - | 4 | 28 | 889_918 | 120 | 1087 | Repeat | Note=ANK 26 |
Hgene | >ANKRD28 | chr3:15793257 | chr3:15507944 | ENST00000383777 | - | 4 | 28 | 925_954 | 120 | 1087 | Repeat | Note=ANK 27 |
Hgene | >ANKRD28 | chr3:15793257 | chr3:15507944 | ENST00000399451 | - | 4 | 28 | 106_135 | 87 | 1054 | Repeat | Note=ANK 3 |
Hgene | >ANKRD28 | chr3:15793257 | chr3:15507944 | ENST00000399451 | - | 4 | 28 | 139_168 | 87 | 1054 | Repeat | Note=ANK 4 |
Hgene | >ANKRD28 | chr3:15793257 | chr3:15507944 | ENST00000399451 | - | 4 | 28 | 172_201 | 87 | 1054 | Repeat | Note=ANK 5 |
Hgene | >ANKRD28 | chr3:15793257 | chr3:15507944 | ENST00000399451 | - | 4 | 28 | 205_234 | 87 | 1054 | Repeat | Note=ANK 6 |
Hgene | >ANKRD28 | chr3:15793257 | chr3:15507944 | ENST00000399451 | - | 4 | 28 | 238_267 | 87 | 1054 | Repeat | Note=ANK 7 |
Hgene | >ANKRD28 | chr3:15793257 | chr3:15507944 | ENST00000399451 | - | 4 | 28 | 271_301 | 87 | 1054 | Repeat | Note=ANK 8 |
Hgene | >ANKRD28 | chr3:15793257 | chr3:15507944 | ENST00000399451 | - | 4 | 28 | 305_334 | 87 | 1054 | Repeat | Note=ANK 9 |
Hgene | >ANKRD28 | chr3:15793257 | chr3:15507944 | ENST00000399451 | - | 4 | 28 | 338_367 | 87 | 1054 | Repeat | Note=ANK 10 |
Hgene | >ANKRD28 | chr3:15793257 | chr3:15507944 | ENST00000399451 | - | 4 | 28 | 371_400 | 87 | 1054 | Repeat | Note=ANK 11 |
Hgene | >ANKRD28 | chr3:15793257 | chr3:15507944 | ENST00000399451 | - | 4 | 28 | 404_433 | 87 | 1054 | Repeat | Note=ANK 12 |
Hgene | >ANKRD28 | chr3:15793257 | chr3:15507944 | ENST00000399451 | - | 4 | 28 | 437_466 | 87 | 1054 | Repeat | Note=ANK 13 |
Hgene | >ANKRD28 | chr3:15793257 | chr3:15507944 | ENST00000399451 | - | 4 | 28 | 470_500 | 87 | 1054 | Repeat | Note=ANK 14 |
Hgene | >ANKRD28 | chr3:15793257 | chr3:15507944 | ENST00000399451 | - | 4 | 28 | 504_534 | 87 | 1054 | Repeat | Note=ANK 15 |
Hgene | >ANKRD28 | chr3:15793257 | chr3:15507944 | ENST00000399451 | - | 4 | 28 | 549_578 | 87 | 1054 | Repeat | Note=ANK 16 |
Hgene | >ANKRD28 | chr3:15793257 | chr3:15507944 | ENST00000399451 | - | 4 | 28 | 582_611 | 87 | 1054 | Repeat | Note=ANK 17 |
Hgene | >ANKRD28 | chr3:15793257 | chr3:15507944 | ENST00000399451 | - | 4 | 28 | 616_645 | 87 | 1054 | Repeat | Note=ANK 18 |
Hgene | >ANKRD28 | chr3:15793257 | chr3:15507944 | ENST00000399451 | - | 4 | 28 | 652_681 | 87 | 1054 | Repeat | Note=ANK 19 |
Hgene | >ANKRD28 | chr3:15793257 | chr3:15507944 | ENST00000399451 | - | 4 | 28 | 685_714 | 87 | 1054 | Repeat | Note=ANK 20 |
Hgene | >ANKRD28 | chr3:15793257 | chr3:15507944 | ENST00000399451 | - | 4 | 28 | 718_747 | 87 | 1054 | Repeat | Note=ANK 21 |
Hgene | >ANKRD28 | chr3:15793257 | chr3:15507944 | ENST00000399451 | - | 4 | 28 | 73_102 | 87 | 1054 | Repeat | Note=ANK 2 |
Hgene | >ANKRD28 | chr3:15793257 | chr3:15507944 | ENST00000399451 | - | 4 | 28 | 755_784 | 87 | 1054 | Repeat | Note=ANK 22 |
Hgene | >ANKRD28 | chr3:15793257 | chr3:15507944 | ENST00000399451 | - | 4 | 28 | 787_817 | 87 | 1054 | Repeat | Note=ANK 23 |
Hgene | >ANKRD28 | chr3:15793257 | chr3:15507944 | ENST00000399451 | - | 4 | 28 | 822_851 | 87 | 1054 | Repeat | Note=ANK 24 |
Hgene | >ANKRD28 | chr3:15793257 | chr3:15507944 | ENST00000399451 | - | 4 | 28 | 855_885 | 87 | 1054 | Repeat | Note=ANK 25 |
Hgene | >ANKRD28 | chr3:15793257 | chr3:15507944 | ENST00000399451 | - | 4 | 28 | 889_918 | 87 | 1054 | Repeat | Note=ANK 26 |
Hgene | >ANKRD28 | chr3:15793257 | chr3:15507944 | ENST00000399451 | - | 4 | 28 | 925_954 | 87 | 1054 | Repeat | Note=ANK 27 |
Tgene | COLQ | chr3:15793257 | chr3:15507944 | ENST00000383781 | - | 10 | 17 | 96_269 | 229 | 446 | Domain | Note=Collagen-like 1 |
Tgene | COLQ | chr3:15793257 | chr3:15507944 | ENST00000383786 | - | 9 | 16 | 96_269 | 205 | 422 | Domain | Note=Collagen-like 1 |
Tgene | COLQ | chr3:15793257 | chr3:15507944 | ENST00000383787 | - | 9 | 16 | 96_269 | 230 | 447 | Domain | Note=Collagen-like 1 |
Tgene | COLQ | chr3:15793257 | chr3:15507944 | ENST00000383788 | - | 10 | 17 | 96_269 | 239 | 456 | Domain | Note=Collagen-like 1 |
Tgene | COLQ | chr3:15793257 | chr3:15507944 | ENST00000603808 | - | 10 | 17 | 96_269 | 239 | 457 | Domain | Note=Collagen-like 1 |
Tgene | COLQ | chr3:15793257 | chr3:15507944 | ENST00000383781 | - | 10 | 17 | 130_133 | 229 | 446 | Region | Heparan sulfate proteoglycan binding |
Tgene | COLQ | chr3:15793257 | chr3:15507944 | ENST00000383781 | - | 10 | 17 | 51_67 | 229 | 446 | Region | Note=PRAD |
Tgene | COLQ | chr3:15793257 | chr3:15507944 | ENST00000383786 | - | 9 | 16 | 130_133 | 205 | 422 | Region | Heparan sulfate proteoglycan binding |
Tgene | COLQ | chr3:15793257 | chr3:15507944 | ENST00000383786 | - | 9 | 16 | 51_67 | 205 | 422 | Region | Note=PRAD |
Tgene | COLQ | chr3:15793257 | chr3:15507944 | ENST00000383787 | - | 9 | 16 | 130_133 | 230 | 447 | Region | Heparan sulfate proteoglycan binding |
Tgene | COLQ | chr3:15793257 | chr3:15507944 | ENST00000383787 | - | 9 | 16 | 51_67 | 230 | 447 | Region | Note=PRAD |
Tgene | COLQ | chr3:15793257 | chr3:15507944 | ENST00000383788 | - | 10 | 17 | 130_133 | 239 | 456 | Region | Heparan sulfate proteoglycan binding |
Tgene | COLQ | chr3:15793257 | chr3:15507944 | ENST00000383788 | - | 10 | 17 | 235_238 | 239 | 456 | Region | Heparan sulfate proteoglycan binding |
Tgene | COLQ | chr3:15793257 | chr3:15507944 | ENST00000383788 | - | 10 | 17 | 51_67 | 239 | 456 | Region | Note=PRAD |
Tgene | COLQ | chr3:15793257 | chr3:15507944 | ENST00000603808 | - | 10 | 17 | 130_133 | 239 | 457 | Region | Heparan sulfate proteoglycan binding |
Tgene | COLQ | chr3:15793257 | chr3:15507944 | ENST00000603808 | - | 10 | 17 | 235_238 | 239 | 457 | Region | Heparan sulfate proteoglycan binding |
Tgene | COLQ | chr3:15793257 | chr3:15507944 | ENST00000603808 | - | 10 | 17 | 51_67 | 239 | 457 | Region | Note=PRAD |
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FusionGeneSequence for ANKRD28_COLQ |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_ANKRD28_ENST00000399451_chr3_15900884_-_COLQ_ENST00000383785_chr3_15531144_-_9aa >In-frame_ANKRD28_ENST00000383777_chr3_15793257_-_COLQ_ENST00000435459_chr3_15507944_-_337aa MSRVCIVVLEEVEDESPAFISKLPQENKSLHSPPSGNVLVRYPSLVQAIFNGDPDEVRALIFKKEDVNFQDNEKRTPLHAAAYLGDAEII ELLILSGARVNAKDSKWLTPLHRAVASCSEGQKGDSGVMGPPGKPGPSGQPGRPGPPGPPPAGQLIMGPKGERGFPGPPGRCLCGPTMNV NNPSYGESVYGPSSPRVPVIFVVNNQEELERLNTQNAIAFRRDQRSLYFKDSLGWLPIQLTPFYPVDYTADQHGTCGDGLLQPGEECDDG >In-frame_ANKRD28_ENST00000383777_chr3_15793257_-_COLQ_ENST00000383787_chr3_15507944_-_337aa MSRVCIVVLEEVEDESPAFISKLPQENKSLHSPPSGNVLVRYPSLVQAIFNGDPDEVRALIFKKEDVNFQDNEKRTPLHAAAYLGDAEII ELLILSGARVNAKDSKWLTPLHRAVASCSEGQKGDSGVMGPPGKPGPSGQPGRPGPPGPPPAGQLIMGPKGERGFPGPPGRCLCGPTMNV NNPSYGESVYGPSSPRVPVIFVVNNQEELERLNTQNAIAFRRDQRSLYFKDSLGWLPIQLTPFYPVDYTADQHGTCGDGLLQPGEECDDG >In-frame_ANKRD28_ENST00000383777_chr3_15793257_-_COLQ_ENST00000383788_chr3_15507944_-_337aa MSRVCIVVLEEVEDESPAFISKLPQENKSLHSPPSGNVLVRYPSLVQAIFNGDPDEVRALIFKKEDVNFQDNEKRTPLHAAAYLGDAEII ELLILSGARVNAKDSKWLTPLHRAVASCSEGQKGDSGVMGPPGKPGPSGQPGRPGPPGPPPAGQLIMGPKGERGFPGPPGRCLCGPTMNV NNPSYGESVYGPSSPRVPVIFVVNNQEELERLNTQNAIAFRRDQRSLYFKDSLGWLPIQLTPFYPVDYTADQHGTCGDGLLQPGEECDDG >In-frame_ANKRD28_ENST00000399451_chr3_15793257_-_COLQ_ENST00000435459_chr3_15507944_-_304aa MAFLKLRDQPSLVQAIFNGDPDEVRALIFKKEDVNFQDNEKRTPLHAAAYLGDAEIIELLILSGARVNAKDSKWLTPLHRAVASCSEGQK GDSGVMGPPGKPGPSGQPGRPGPPGPPPAGQLIMGPKGERGFPGPPGRCLCGPTMNVNNPSYGESVYGPSSPRVPVIFVVNNQEELERLN TQNAIAFRRDQRSLYFKDSLGWLPIQLTPFYPVDYTADQHGTCGDGLLQPGEECDDGNSDVGDDCIRCHRAYCGDGHRHEGVEDCDGSDF >In-frame_ANKRD28_ENST00000399451_chr3_15793257_-_COLQ_ENST00000383787_chr3_15507944_-_304aa MAFLKLRDQPSLVQAIFNGDPDEVRALIFKKEDVNFQDNEKRTPLHAAAYLGDAEIIELLILSGARVNAKDSKWLTPLHRAVASCSEGQK GDSGVMGPPGKPGPSGQPGRPGPPGPPPAGQLIMGPKGERGFPGPPGRCLCGPTMNVNNPSYGESVYGPSSPRVPVIFVVNNQEELERLN TQNAIAFRRDQRSLYFKDSLGWLPIQLTPFYPVDYTADQHGTCGDGLLQPGEECDDGNSDVGDDCIRCHRAYCGDGHRHEGVEDCDGSDF >In-frame_ANKRD28_ENST00000399451_chr3_15793257_-_COLQ_ENST00000383788_chr3_15507944_-_304aa MAFLKLRDQPSLVQAIFNGDPDEVRALIFKKEDVNFQDNEKRTPLHAAAYLGDAEIIELLILSGARVNAKDSKWLTPLHRAVASCSEGQK GDSGVMGPPGKPGPSGQPGRPGPPGPPPAGQLIMGPKGERGFPGPPGRCLCGPTMNVNNPSYGESVYGPSSPRVPVIFVVNNQEELERLN TQNAIAFRRDQRSLYFKDSLGWLPIQLTPFYPVDYTADQHGTCGDGLLQPGEECDDGNSDVGDDCIRCHRAYCGDGHRHEGVEDCDGSDF |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_ANKRD28_ENST00000399451_chr3_15900884_-_COLQ_ENST00000383785_chr3_15531144_-_27nt >In-frame_ANKRD28_ENST00000383777_chr3_15793257_-_COLQ_ENST00000435459_chr3_15507944_-_1011nt ATGAGTCGAGTGTGTATTGTTGTTTTGGAGGAGGTAGAAGATGAATCTCCTGCATTCATTTCTAAATTGCCACAGGAAAATAAATCCCTA CATTCTCCACCTTCTGGAAATGTATTGGTAAGATATCCATCACTGGTGCAAGCTATATTTAACGGAGATCCTGATGAAGTTCGAGCACTA ATATTTAAGAAAGAAGATGTTAACTTTCAGGACAATGAAAAGCGAACCCCATTGCACGCCGCAGCTTACCTTGGAGATGCAGAAATCATT GAACTTCTTATTTTATCTGGAGCTAGAGTTAATGCCAAAGACAGCAAATGGTTGACACCTTTACACAGAGCAGTTGCATCTTGTAGTGAG GGACAGAAAGGGGATAGTGGAGTTATGGGCCCACCAGGCAAGCCTGGGCCTTCTGGTCAACCTGGCCGTCCGGGGCCCCCAGGCCCCCCA CCTGCAGGACAACTTATAATGGGACCCAAAGGGGAAAGAGGATTTCCCGGGCCTCCAGGAAGATGTCTTTGTGGACCCACTATGAATGTG AATAACCCTTCCTACGGGGAATCTGTGTATGGGCCCAGTTCCCCGCGAGTTCCTGTGATTTTTGTGGTCAACAACCAGGAGGAGCTTGAG AGGCTGAACACCCAAAACGCCATTGCCTTCCGCAGAGACCAGAGATCTCTGTACTTCAAGGACAGCCTTGGCTGGCTCCCCATCCAGCTG ACCCCTTTCTACCCTGTGGATTACACTGCAGACCAGCACGGCACCTGTGGGGATGGGCTCCTGCAGCCTGGGGAGGAGTGTGACGACGGT AACAGCGATGTGGGTGACGACTGCATCCGCTGTCACCGTGCCTACTGTGGAGATGGTCACCGGCATGAGGGTGTGGAGGACTGTGACGGC TCTGACTTTGGCTACCTGACATGCGAGACCTATCTCCCTGGGTCATATGGAGACCTGCAATGCACCCAGTACTGCTACATCGACTCCACG >In-frame_ANKRD28_ENST00000383777_chr3_15793257_-_COLQ_ENST00000383787_chr3_15507944_-_1011nt ATGAGTCGAGTGTGTATTGTTGTTTTGGAGGAGGTAGAAGATGAATCTCCTGCATTCATTTCTAAATTGCCACAGGAAAATAAATCCCTA CATTCTCCACCTTCTGGAAATGTATTGGTAAGATATCCATCACTGGTGCAAGCTATATTTAACGGAGATCCTGATGAAGTTCGAGCACTA ATATTTAAGAAAGAAGATGTTAACTTTCAGGACAATGAAAAGCGAACCCCATTGCACGCCGCAGCTTACCTTGGAGATGCAGAAATCATT GAACTTCTTATTTTATCTGGAGCTAGAGTTAATGCCAAAGACAGCAAATGGTTGACACCTTTACACAGAGCAGTTGCATCTTGTAGTGAG GGACAGAAAGGGGATAGTGGAGTTATGGGCCCACCAGGCAAGCCTGGGCCTTCTGGTCAACCTGGCCGTCCGGGGCCCCCAGGCCCCCCA CCTGCAGGACAACTTATAATGGGACCCAAAGGGGAAAGAGGATTTCCCGGGCCTCCAGGAAGATGTCTTTGTGGACCCACTATGAATGTG AATAACCCTTCCTACGGGGAATCTGTGTATGGGCCCAGTTCCCCGCGAGTTCCTGTGATTTTTGTGGTCAACAACCAGGAGGAGCTTGAG AGGCTGAACACCCAAAACGCCATTGCCTTCCGCAGAGACCAGAGATCTCTGTACTTCAAGGACAGCCTTGGCTGGCTCCCCATCCAGCTG ACCCCTTTCTACCCTGTGGATTACACTGCAGACCAGCACGGCACCTGTGGGGATGGGCTCCTGCAGCCTGGGGAGGAGTGTGACGACGGT AACAGCGATGTGGGTGACGACTGCATCCGCTGTCACCGTGCCTACTGTGGAGATGGTCACCGGCATGAGGGTGTGGAGGACTGTGACGGC TCTGACTTTGGCTACCTGACATGCGAGACCTATCTCCCTGGGTCATATGGAGACCTGCAATGCACCCAGTACTGCTACATCGACTCCACG >In-frame_ANKRD28_ENST00000383777_chr3_15793257_-_COLQ_ENST00000383788_chr3_15507944_-_1011nt ATGAGTCGAGTGTGTATTGTTGTTTTGGAGGAGGTAGAAGATGAATCTCCTGCATTCATTTCTAAATTGCCACAGGAAAATAAATCCCTA CATTCTCCACCTTCTGGAAATGTATTGGTAAGATATCCATCACTGGTGCAAGCTATATTTAACGGAGATCCTGATGAAGTTCGAGCACTA ATATTTAAGAAAGAAGATGTTAACTTTCAGGACAATGAAAAGCGAACCCCATTGCACGCCGCAGCTTACCTTGGAGATGCAGAAATCATT GAACTTCTTATTTTATCTGGAGCTAGAGTTAATGCCAAAGACAGCAAATGGTTGACACCTTTACACAGAGCAGTTGCATCTTGTAGTGAG GGACAGAAAGGGGATAGTGGAGTTATGGGCCCACCAGGCAAGCCTGGGCCTTCTGGTCAACCTGGCCGTCCGGGGCCCCCAGGCCCCCCA CCTGCAGGACAACTTATAATGGGACCCAAAGGGGAAAGAGGATTTCCCGGGCCTCCAGGAAGATGTCTTTGTGGACCCACTATGAATGTG AATAACCCTTCCTACGGGGAATCTGTGTATGGGCCCAGTTCCCCGCGAGTTCCTGTGATTTTTGTGGTCAACAACCAGGAGGAGCTTGAG AGGCTGAACACCCAAAACGCCATTGCCTTCCGCAGAGACCAGAGATCTCTGTACTTCAAGGACAGCCTTGGCTGGCTCCCCATCCAGCTG ACCCCTTTCTACCCTGTGGATTACACTGCAGACCAGCACGGCACCTGTGGGGATGGGCTCCTGCAGCCTGGGGAGGAGTGTGACGACGGT AACAGCGATGTGGGTGACGACTGCATCCGCTGTCACCGTGCCTACTGTGGAGATGGTCACCGGCATGAGGGTGTGGAGGACTGTGACGGC TCTGACTTTGGCTACCTGACATGCGAGACCTATCTCCCTGGGTCATATGGAGACCTGCAATGCACCCAGTACTGCTACATCGACTCCACG >In-frame_ANKRD28_ENST00000399451_chr3_15793257_-_COLQ_ENST00000435459_chr3_15507944_-_912nt ATGGCGTTCCTCAAACTCCGTGACCAGCCATCACTGGTGCAAGCTATATTTAACGGAGATCCTGATGAAGTTCGAGCACTAATATTTAAG AAAGAAGATGTTAACTTTCAGGACAATGAAAAGCGAACCCCATTGCACGCCGCAGCTTACCTTGGAGATGCAGAAATCATTGAACTTCTT ATTTTATCTGGAGCTAGAGTTAATGCCAAAGACAGCAAATGGTTGACACCTTTACACAGAGCAGTTGCATCTTGTAGTGAGGGACAGAAA GGGGATAGTGGAGTTATGGGCCCACCAGGCAAGCCTGGGCCTTCTGGTCAACCTGGCCGTCCGGGGCCCCCAGGCCCCCCACCTGCAGGA CAACTTATAATGGGACCCAAAGGGGAAAGAGGATTTCCCGGGCCTCCAGGAAGATGTCTTTGTGGACCCACTATGAATGTGAATAACCCT TCCTACGGGGAATCTGTGTATGGGCCCAGTTCCCCGCGAGTTCCTGTGATTTTTGTGGTCAACAACCAGGAGGAGCTTGAGAGGCTGAAC ACCCAAAACGCCATTGCCTTCCGCAGAGACCAGAGATCTCTGTACTTCAAGGACAGCCTTGGCTGGCTCCCCATCCAGCTGACCCCTTTC TACCCTGTGGATTACACTGCAGACCAGCACGGCACCTGTGGGGATGGGCTCCTGCAGCCTGGGGAGGAGTGTGACGACGGTAACAGCGAT GTGGGTGACGACTGCATCCGCTGTCACCGTGCCTACTGTGGAGATGGTCACCGGCATGAGGGTGTGGAGGACTGTGACGGCTCTGACTTT GGCTACCTGACATGCGAGACCTATCTCCCTGGGTCATATGGAGACCTGCAATGCACCCAGTACTGCTACATCGACTCCACGCCCTGCCGC >In-frame_ANKRD28_ENST00000399451_chr3_15793257_-_COLQ_ENST00000383787_chr3_15507944_-_912nt ATGGCGTTCCTCAAACTCCGTGACCAGCCATCACTGGTGCAAGCTATATTTAACGGAGATCCTGATGAAGTTCGAGCACTAATATTTAAG AAAGAAGATGTTAACTTTCAGGACAATGAAAAGCGAACCCCATTGCACGCCGCAGCTTACCTTGGAGATGCAGAAATCATTGAACTTCTT ATTTTATCTGGAGCTAGAGTTAATGCCAAAGACAGCAAATGGTTGACACCTTTACACAGAGCAGTTGCATCTTGTAGTGAGGGACAGAAA GGGGATAGTGGAGTTATGGGCCCACCAGGCAAGCCTGGGCCTTCTGGTCAACCTGGCCGTCCGGGGCCCCCAGGCCCCCCACCTGCAGGA CAACTTATAATGGGACCCAAAGGGGAAAGAGGATTTCCCGGGCCTCCAGGAAGATGTCTTTGTGGACCCACTATGAATGTGAATAACCCT TCCTACGGGGAATCTGTGTATGGGCCCAGTTCCCCGCGAGTTCCTGTGATTTTTGTGGTCAACAACCAGGAGGAGCTTGAGAGGCTGAAC ACCCAAAACGCCATTGCCTTCCGCAGAGACCAGAGATCTCTGTACTTCAAGGACAGCCTTGGCTGGCTCCCCATCCAGCTGACCCCTTTC TACCCTGTGGATTACACTGCAGACCAGCACGGCACCTGTGGGGATGGGCTCCTGCAGCCTGGGGAGGAGTGTGACGACGGTAACAGCGAT GTGGGTGACGACTGCATCCGCTGTCACCGTGCCTACTGTGGAGATGGTCACCGGCATGAGGGTGTGGAGGACTGTGACGGCTCTGACTTT GGCTACCTGACATGCGAGACCTATCTCCCTGGGTCATATGGAGACCTGCAATGCACCCAGTACTGCTACATCGACTCCACGCCCTGCCGC >In-frame_ANKRD28_ENST00000399451_chr3_15793257_-_COLQ_ENST00000383788_chr3_15507944_-_912nt ATGGCGTTCCTCAAACTCCGTGACCAGCCATCACTGGTGCAAGCTATATTTAACGGAGATCCTGATGAAGTTCGAGCACTAATATTTAAG AAAGAAGATGTTAACTTTCAGGACAATGAAAAGCGAACCCCATTGCACGCCGCAGCTTACCTTGGAGATGCAGAAATCATTGAACTTCTT ATTTTATCTGGAGCTAGAGTTAATGCCAAAGACAGCAAATGGTTGACACCTTTACACAGAGCAGTTGCATCTTGTAGTGAGGGACAGAAA GGGGATAGTGGAGTTATGGGCCCACCAGGCAAGCCTGGGCCTTCTGGTCAACCTGGCCGTCCGGGGCCCCCAGGCCCCCCACCTGCAGGA CAACTTATAATGGGACCCAAAGGGGAAAGAGGATTTCCCGGGCCTCCAGGAAGATGTCTTTGTGGACCCACTATGAATGTGAATAACCCT TCCTACGGGGAATCTGTGTATGGGCCCAGTTCCCCGCGAGTTCCTGTGATTTTTGTGGTCAACAACCAGGAGGAGCTTGAGAGGCTGAAC ACCCAAAACGCCATTGCCTTCCGCAGAGACCAGAGATCTCTGTACTTCAAGGACAGCCTTGGCTGGCTCCCCATCCAGCTGACCCCTTTC TACCCTGTGGATTACACTGCAGACCAGCACGGCACCTGTGGGGATGGGCTCCTGCAGCCTGGGGAGGAGTGTGACGACGGTAACAGCGAT GTGGGTGACGACTGCATCCGCTGTCACCGTGCCTACTGTGGAGATGGTCACCGGCATGAGGGTGTGGAGGACTGTGACGGCTCTGACTTT GGCTACCTGACATGCGAGACCTATCTCCCTGGGTCATATGGAGACCTGCAATGCACCCAGTACTGCTACATCGACTCCACGCCCTGCCGC |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_ANKRD28_ENST00000399451_chr3_15900884_-_COLQ_ENST00000383785_chr3_15531144_-_3310nt GCGGCCGCGGGGGCTGCCAGGGTATTTCGGGAAGGGGGCGTGAGGAGGCGGCGGCGGCAGCGGCGGGTAGGGCAGGCAGCAGAGGGAAGG AGAAAGAAAGGAAGGAAGAGGGCGGGGAGTCCTCAGAGGAGGAGGCGGGACCGGCCGGGCACCTCACCTCTCGGCGGCGGCGGCGGCGGC GGCGGCGGCGGGCGGCCGGGGAGGCGGCGCCGCCCCCTGCCCGCAGGTCTTCTCAGCGCAGTCGGCCGCGGACCCGCTGGTCCCGGGCAG CGGCCAAGGCTACTGGGGCGGGAGCAGTGGGCCGGTCGGCGGCGGCAGCGGCAGCGGCGGAGGAGGAGGAGGCTGGAGTGGGCGCGGAGG CGACCGCCATGGCGTTCCTCAAACTCCGTGACCAGCCCTTCCCAGCCTGGATCAGAAGAAGCGTGGTGGCCACAAAGCATGCTGCCTGCT GACGCCTCCTCCACCACCACTGTTCCCACCACCATTCTTCAGAGGTGGCCGAAGTCCGCTTCTCTCCCCAGACATGAAGAATCTCATGCT GGAACTGGAGACCTCGCAGTCCCCGTGCATGCAAGGCTCGCTAGGCTCCCCTGGGCCTCCCGGCCCCCAGGGTCCACCGGGGCTTCCTGG CAAGACAGGACCAAAGGGAGAAAAGGGGGAGCTTGGCCGACCAGGAAGGAAGGGTAGACCTGGCCCCCCAGGTGTTCCTGGCATGCCTGG GCCCATCGGTTGGCCAGGCCCTGAAGGACCCAGGGGTGAAAAAGGTGACCTGGGTATGATGGGCTTGCCAGGGTCAAGAGGACCAATGGG CTCCAAGGGCTACCCTGGATCCAGAGGGGAAAAGGGATCCAGAGGTGAAAAGGGTGACCTGGGTCCCAAAGGAGAAAAGGGTTTCCCAGG ATTTCCTGGAATGTTGGGGCAGAAAGGTGAAATGGGTCCAAAAGGTGAACCTGGGATAGCAGGACACCGAGGACCCACAGGAAGACCAGG AAAACGAGGCAAGCAGAGTTCAAGAACTCCTTGCACATTACCAAGACGGCCCCCAGTGCCATGTGGACAAGGCAGCCGGTCACCTGTCAC CGTTGTGGCTGGAAAGGAGTCCCAAGCCTGCCTGCTCCCCAGATTTGAGGAAGATTACATTTCATCAGGGACAGAAAGGGGATAGTGGAG TTATGGGCCCACCAGGCAAGCCTGGGCCTTCTGGTCAACCTGGCCGTCCGGGGCCCCCAGGCCCCCCACCTGCAGGACAACTTATAATGG GACCCAAAGGGGAAAGAGGATTTCCCGGGCCTCCAGGAAGATGTCTTTGTGGACCCACTATGAATGTGAATAACCCTTCCTACGGGGAAT CTGTGTATGGGCCCAGTTCCCCGCGAGTTCCTGTGATTTTTGTGGTCAACAACCAGGAGGAGCTTGAGAGGCTGAACACCCAAAACGCCA TTGCCTTCCGCAGAGACCAGAGATCTCTGTACTTCAAGGACAGCCTTGGCTGGCTCCCCATCCAGCTGACCCCTTTCTACCCTGTGGATT ACACTGCAGACCAGCACGGCACCTGTGGGGATGGGCTCCTGCAGCCTGGGGAGGAGTGTGACGACGGTAACAGCGATGTGGGTGACGACT GCATCCGCTGTCACCGTGCCTACTGTGGAGATGGTCACCGGCATGAGGGTGTGGAGGACTGTGACGGCTCTGACTTTGGCTACCTGACAT GCGAGACCTATCTCCCTGGGTCATATGGAGACCTGCAATGCACCCAGTACTGCTACATCGACTCCACGCCCTGCCGCTACTTCACCTGAG GGCCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGGCCATGTCCTGGCCCCGTCTCCA CCAACCTTTGTGTGACAAAAACAAGGACAAATTCCTGCTACTAAGACATGCTGTTAACTCAGTCTGACTGGAAGAATTTAGGACCACTGC ATCCTGTCTTAATCCAAGGTACTGGAAAACCTTCCACATGCCCAACCTGAGACCTGTTCCCCATCGCTACCATTTGGCCAAACAACCGGC TACAATGCTCTTCCTCTTCTGGAATGTTGCTGACCCAGGCCGTGGACTTGGCTGAGCACTGTTAGACACACACAGACCTGCAGGCTGTTT TAGAATGTTTTGATCTCTTTGGGGAATCTGGAGTACAGGCCTCTCCGCCCCTGACCACCGAAACGTGCAGGCATTCTCACTCACACTGGG CAGCCCGCTGTCGGGTCTCTCTAGGCCTATGAACCACAAAGCAGGGAAGTGGGCACGTTCTCTCGGGGTGGCTCACAGCTTTGAACCTGC CAAAGGACCCCTCGACTGGCCACAGCCCAGCCCAGCCTGACGTGGATGTGGCTGCCCAGGAAAAGACTTAACTGTGAAAAAGTACTGAGA ACCCACCTGACCCAGGCTTGCCCCAAGCAGAGGCTAGAGAAGAGGCTCCTCTTCTCAGTGTTTCCCAAAGGGGCGGCTCTTGTGGTTTCA AAATCTCTGGCACCATCTTGACCTCTTGGCTCTCTCTGCACTTTGCCCCCTGTCTCAAAAATGTCCCTCATGTCCATTTCCTGTCCAGGA GACTCATGAGGACTGTGTGACCTGCACAAGCCCACACCTGGGCAGGCTGTTGGTGTCTCCTTGGTCCTTAGGCAGATACTCCCCTGAGTC CCCGATCTAGGGCCAGCTGCAGAGGGCTCTCTCTAGGCAGAGCGTTCCTGGCCAGAGCTCTACCTCTTTGCCTCCTGCTGACCCCTGACA GCGTCCCGTGGCATTTCTTTCATGTCTGCATATTGCATAGCCTTGTCCTCCTGTGTGCCTGAGCTCCTCCCTTTTCAATAAGATTATTAG TCGTGCATGTCTGTGAGCTGCCTTTCATCACCATTTTTCCTGAGTAGGGCTTAGTTTTATTCTGGAAAGACATCTCCAAGGTGAGGTCCA CCCCCACAGCAGACCTCAAGTAGAAATTGCCCAATTTTTACCAGCTGGAGGGACACCCTTGGGTTTTTGTACGAAGCTATTTAATGAGCC TGTGTCTTGGGGACTCAGCAGGCTGGAGCTTGGGGCCTGGTGGACCATCACCTGGTGTCTGTAGGTGGACCCGGTCTCCCACAGGTGACA TCAACCTGAGGGTGGCGTCTTTAGAGACAGGCACATGGGCAGCCCTGTTCCCTTCGCCTCTACTGCGAGGCCTGGGGAGATGTTGTTTTC >In-frame_ANKRD28_ENST00000383777_chr3_15793257_-_COLQ_ENST00000435459_chr3_15507944_-_2522nt ATGAGTCGAGTGTGTATTGTTGTTTTGGAGGAGGTAGAAGATGAATCTCCTGCATTCATTTCTAAATTGCCACAGGAAAATAAATCCCTA CATTCTCCACCTTCTGGAAATGTATTGGTAAGATATCCATCACTGGTGCAAGCTATATTTAACGGAGATCCTGATGAAGTTCGAGCACTA ATATTTAAGAAAGAAGATGTTAACTTTCAGGACAATGAAAAGCGAACCCCATTGCACGCCGCAGCTTACCTTGGAGATGCAGAAATCATT GAACTTCTTATTTTATCTGGAGCTAGAGTTAATGCCAAAGACAGCAAATGGTTGACACCTTTACACAGAGCAGTTGCATCTTGTAGTGAG GGACAGAAAGGGGATAGTGGAGTTATGGGCCCACCAGGCAAGCCTGGGCCTTCTGGTCAACCTGGCCGTCCGGGGCCCCCAGGCCCCCCA CCTGCAGGACAACTTATAATGGGACCCAAAGGGGAAAGAGGATTTCCCGGGCCTCCAGGAAGATGTCTTTGTGGACCCACTATGAATGTG AATAACCCTTCCTACGGGGAATCTGTGTATGGGCCCAGTTCCCCGCGAGTTCCTGTGATTTTTGTGGTCAACAACCAGGAGGAGCTTGAG AGGCTGAACACCCAAAACGCCATTGCCTTCCGCAGAGACCAGAGATCTCTGTACTTCAAGGACAGCCTTGGCTGGCTCCCCATCCAGCTG ACCCCTTTCTACCCTGTGGATTACACTGCAGACCAGCACGGCACCTGTGGGGATGGGCTCCTGCAGCCTGGGGAGGAGTGTGACGACGGT AACAGCGATGTGGGTGACGACTGCATCCGCTGTCACCGTGCCTACTGTGGAGATGGTCACCGGCATGAGGGTGTGGAGGACTGTGACGGC TCTGACTTTGGCTACCTGACATGCGAGACCTATCTCCCTGGGTCATATGGAGACCTGCAATGCACCCAGTACTGCTACATCGACTCCACG CCCTGCCGCTACTTCACCTGAGGGCCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGG CCATGTCCTGGCCCCGTCTCCACCAACCTTTGTGTGACAAAAACAAGGACAAATTCCTGCTACTAAGACATGCTGTTAACTCAGTCTGAC TGGAAGAATTTAGGACCACTGCATCCTGTCTTAATCCAAGGTACTGGAAAACCTTCCACATGCCCAACCTGAGACCTGTTCCCCATCGCT ACCATTTGGCCAAACAACCGGCTACAATGCTCTTCCTCTTCTGGAATGTTGCTGACCCAGGCCGTGGACTTGGCTGAGCACTGTTAGACA CACACAGACCTGCAGGCTGTTTTAGAATGTTTTGATCTCTTTGGGGAATCTGGAGTACAGGCCTCTCCGCCCCTGACCACCGAAACGTGC AGGCATTCTCACTCACACTGGGCAGCCCGCTGTCGGGTCTCTCTAGGCCTATGAACCACAAAGCAGGGAAGTGGGCACGTTCTCTCGGGG TGGCTCACAGCTTTGAACCTGCCAAAGGACCCCTCGACTGGCCACAGCCCAGCCCAGCCTGACGTGGATGTGGCTGCCCAGGAAAAGACT TAACTGTGAAAAAGTACTGAGAACCCACCTGACCCAGGCTTGCCCCAAGCAGAGGCTAGAGAAGAGGCTCCTCTTCTCAGTGTTTCCCAA AGGGGCGGCTCTTGTGGTTTCAAAATCTCTGGCACCATCTTGACCTCTTGGCTCTCTCTGCACTTTGCCCCCTGTCTCAAAAATGTCCCT CATGTCCATTTCCTGTCCAGGAGACTCATGAGGACTGTGTGACCTGCACAAGCCCACACCTGGGCAGGCTGTTGGTGTCTCCTTGGTCCT TAGGCAGATACTCCCCTGAGTCCCCGATCTAGGGCCAGCTGCAGAGGGCTCTCTCTAGGCAGAGCGTTCCTGGCCAGAGCTCTACCTCTT TGCCTCCTGCTGACCCCTGACAGCGTCCCGTGGCATTTCTTTCATGTCTGCATATTGCATAGCCTTGTCCTCCTGTGTGCCTGAGCTCCT CCCTTTTCAATAAGATTATTAGTCGTGCATGTCTGTGAGCTGCCTTTCATCACCATTTTTCCTGAGTAGGGCTTAGTTTTATTCTGGAAA GACATCTCCAAGGTGAGGTCCACCCCCACAGCAGACCTCAAGTAGAAATTGCCCAATTTTTACCAGCTGGAGGGACACCCTTGGGTTTTT GTACGAAGCTATTTAATGAGCCTGTGTCTTGGGGACTCAGCAGGCTGGAGCTTGGGGCCTGGTGGACCATCACCTGGTGTCTGTAGGTGG ACCCGGTCTCCCACAGGTGACATCAACCTGAGGGTGGCGTCTTTAGAGACAGGCACATGGGCAGCCCTGTTCCCTTCGCCTCTACTGCGA GGCCTGGGGAGATGTTGTTTTCATGCTGCTTCCACCATCACACTGGGGTTTCTGGATGGGAAATAAAAAAATAAAGGCAGTTCATTTCCC >In-frame_ANKRD28_ENST00000383777_chr3_15793257_-_COLQ_ENST00000383787_chr3_15507944_-_2522nt ATGAGTCGAGTGTGTATTGTTGTTTTGGAGGAGGTAGAAGATGAATCTCCTGCATTCATTTCTAAATTGCCACAGGAAAATAAATCCCTA CATTCTCCACCTTCTGGAAATGTATTGGTAAGATATCCATCACTGGTGCAAGCTATATTTAACGGAGATCCTGATGAAGTTCGAGCACTA ATATTTAAGAAAGAAGATGTTAACTTTCAGGACAATGAAAAGCGAACCCCATTGCACGCCGCAGCTTACCTTGGAGATGCAGAAATCATT GAACTTCTTATTTTATCTGGAGCTAGAGTTAATGCCAAAGACAGCAAATGGTTGACACCTTTACACAGAGCAGTTGCATCTTGTAGTGAG GGACAGAAAGGGGATAGTGGAGTTATGGGCCCACCAGGCAAGCCTGGGCCTTCTGGTCAACCTGGCCGTCCGGGGCCCCCAGGCCCCCCA CCTGCAGGACAACTTATAATGGGACCCAAAGGGGAAAGAGGATTTCCCGGGCCTCCAGGAAGATGTCTTTGTGGACCCACTATGAATGTG AATAACCCTTCCTACGGGGAATCTGTGTATGGGCCCAGTTCCCCGCGAGTTCCTGTGATTTTTGTGGTCAACAACCAGGAGGAGCTTGAG AGGCTGAACACCCAAAACGCCATTGCCTTCCGCAGAGACCAGAGATCTCTGTACTTCAAGGACAGCCTTGGCTGGCTCCCCATCCAGCTG ACCCCTTTCTACCCTGTGGATTACACTGCAGACCAGCACGGCACCTGTGGGGATGGGCTCCTGCAGCCTGGGGAGGAGTGTGACGACGGT AACAGCGATGTGGGTGACGACTGCATCCGCTGTCACCGTGCCTACTGTGGAGATGGTCACCGGCATGAGGGTGTGGAGGACTGTGACGGC TCTGACTTTGGCTACCTGACATGCGAGACCTATCTCCCTGGGTCATATGGAGACCTGCAATGCACCCAGTACTGCTACATCGACTCCACG CCCTGCCGCTACTTCACCTGAGGGCCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGG CCATGTCCTGGCCCCGTCTCCACCAACCTTTGTGTGACAAAAACAAGGACAAATTCCTGCTACTAAGACATGCTGTTAACTCAGTCTGAC TGGAAGAATTTAGGACCACTGCATCCTGTCTTAATCCAAGGTACTGGAAAACCTTCCACATGCCCAACCTGAGACCTGTTCCCCATCGCT ACCATTTGGCCAAACAACCGGCTACAATGCTCTTCCTCTTCTGGAATGTTGCTGACCCAGGCCGTGGACTTGGCTGAGCACTGTTAGACA CACACAGACCTGCAGGCTGTTTTAGAATGTTTTGATCTCTTTGGGGAATCTGGAGTACAGGCCTCTCCGCCCCTGACCACCGAAACGTGC AGGCATTCTCACTCACACTGGGCAGCCCGCTGTCGGGTCTCTCTAGGCCTATGAACCACAAAGCAGGGAAGTGGGCACGTTCTCTCGGGG TGGCTCACAGCTTTGAACCTGCCAAAGGACCCCTCGACTGGCCACAGCCCAGCCCAGCCTGACGTGGATGTGGCTGCCCAGGAAAAGACT TAACTGTGAAAAAGTACTGAGAACCCACCTGACCCAGGCTTGCCCCAAGCAGAGGCTAGAGAAGAGGCTCCTCTTCTCAGTGTTTCCCAA AGGGGCGGCTCTTGTGGTTTCAAAATCTCTGGCACCATCTTGACCTCTTGGCTCTCTCTGCACTTTGCCCCCTGTCTCAAAAATGTCCCT CATGTCCATTTCCTGTCCAGGAGACTCATGAGGACTGTGTGACCTGCACAAGCCCACACCTGGGCAGGCTGTTGGTGTCTCCTTGGTCCT TAGGCAGATACTCCCCTGAGTCCCCGATCTAGGGCCAGCTGCAGAGGGCTCTCTCTAGGCAGAGCGTTCCTGGCCAGAGCTCTACCTCTT TGCCTCCTGCTGACCCCTGACAGCGTCCCGTGGCATTTCTTTCATGTCTGCATATTGCATAGCCTTGTCCTCCTGTGTGCCTGAGCTCCT CCCTTTTCAATAAGATTATTAGTCGTGCATGTCTGTGAGCTGCCTTTCATCACCATTTTTCCTGAGTAGGGCTTAGTTTTATTCTGGAAA GACATCTCCAAGGTGAGGTCCACCCCCACAGCAGACCTCAAGTAGAAATTGCCCAATTTTTACCAGCTGGAGGGACACCCTTGGGTTTTT GTACGAAGCTATTTAATGAGCCTGTGTCTTGGGGACTCAGCAGGCTGGAGCTTGGGGCCTGGTGGACCATCACCTGGTGTCTGTAGGTGG ACCCGGTCTCCCACAGGTGACATCAACCTGAGGGTGGCGTCTTTAGAGACAGGCACATGGGCAGCCCTGTTCCCTTCGCCTCTACTGCGA GGCCTGGGGAGATGTTGTTTTCATGCTGCTTCCACCATCACACTGGGGTTTCTGGATGGGAAATAAAAAAATAAAGGCAGTTCATTTCCC >In-frame_ANKRD28_ENST00000383777_chr3_15793257_-_COLQ_ENST00000383788_chr3_15507944_-_2508nt ATGAGTCGAGTGTGTATTGTTGTTTTGGAGGAGGTAGAAGATGAATCTCCTGCATTCATTTCTAAATTGCCACAGGAAAATAAATCCCTA CATTCTCCACCTTCTGGAAATGTATTGGTAAGATATCCATCACTGGTGCAAGCTATATTTAACGGAGATCCTGATGAAGTTCGAGCACTA ATATTTAAGAAAGAAGATGTTAACTTTCAGGACAATGAAAAGCGAACCCCATTGCACGCCGCAGCTTACCTTGGAGATGCAGAAATCATT GAACTTCTTATTTTATCTGGAGCTAGAGTTAATGCCAAAGACAGCAAATGGTTGACACCTTTACACAGAGCAGTTGCATCTTGTAGTGAG GGACAGAAAGGGGATAGTGGAGTTATGGGCCCACCAGGCAAGCCTGGGCCTTCTGGTCAACCTGGCCGTCCGGGGCCCCCAGGCCCCCCA CCTGCAGGACAACTTATAATGGGACCCAAAGGGGAAAGAGGATTTCCCGGGCCTCCAGGAAGATGTCTTTGTGGACCCACTATGAATGTG AATAACCCTTCCTACGGGGAATCTGTGTATGGGCCCAGTTCCCCGCGAGTTCCTGTGATTTTTGTGGTCAACAACCAGGAGGAGCTTGAG AGGCTGAACACCCAAAACGCCATTGCCTTCCGCAGAGACCAGAGATCTCTGTACTTCAAGGACAGCCTTGGCTGGCTCCCCATCCAGCTG ACCCCTTTCTACCCTGTGGATTACACTGCAGACCAGCACGGCACCTGTGGGGATGGGCTCCTGCAGCCTGGGGAGGAGTGTGACGACGGT AACAGCGATGTGGGTGACGACTGCATCCGCTGTCACCGTGCCTACTGTGGAGATGGTCACCGGCATGAGGGTGTGGAGGACTGTGACGGC TCTGACTTTGGCTACCTGACATGCGAGACCTATCTCCCTGGGTCATATGGAGACCTGCAATGCACCCAGTACTGCTACATCGACTCCACG CCCTGCCGCTACTTCACCTGAGGGCCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGG CCATGTCCTGGCCCCGTCTCCACCAACCTTTGTGTGACAAAAACAAGGACAAATTCCTGCTACTAAGACATGCTGTTAACTCAGTCTGAC TGGAAGAATTTAGGACCACTGCATCCTGTCTTAATCCAAGGTACTGGAAAACCTTCCACATGCCCAACCTGAGACCTGTTCCCCATCGCT ACCATTTGGCCAAACAACCGGCTACAATGCTCTTCCTCTTCTGGAATGTTGCTGACCCAGGCCGTGGACTTGGCTGAGCACTGTTAGACA CACACAGACCTGCAGGCTGTTTTAGAATGTTTTGATCTCTTTGGGGAATCTGGAGTACAGGCCTCTCCGCCCCTGACCACCGAAACGTGC AGGCATTCTCACTCACACTGGGCAGCCCGCTGTCGGGTCTCTCTAGGCCTATGAACCACAAAGCAGGGAAGTGGGCACGTTCTCTCGGGG TGGCTCACAGCTTTGAACCTGCCAAAGGACCCCTCGACTGGCCACAGCCCAGCCCAGCCTGACGTGGATGTGGCTGCCCAGGAAAAGACT TAACTGTGAAAAAGTACTGAGAACCCACCTGACCCAGGCTTGCCCCAAGCAGAGGCTAGAGAAGAGGCTCCTCTTCTCAGTGTTTCCCAA AGGGGCGGCTCTTGTGGTTTCAAAATCTCTGGCACCATCTTGACCTCTTGGCTCTCTCTGCACTTTGCCCCCTGTCTCAAAAATGTCCCT CATGTCCATTTCCTGTCCAGGAGACTCATGAGGACTGTGTGACCTGCACAAGCCCACACCTGGGCAGGCTGTTGGTGTCTCCTTGGTCCT TAGGCAGATACTCCCCTGAGTCCCCGATCTAGGGCCAGCTGCAGAGGGCTCTCTCTAGGCAGAGCGTTCCTGGCCAGAGCTCTACCTCTT TGCCTCCTGCTGACCCCTGACAGCGTCCCGTGGCATTTCTTTCATGTCTGCATATTGCATAGCCTTGTCCTCCTGTGTGCCTGAGCTCCT CCCTTTTCAATAAGATTATTAGTCGTGCATGTCTGTGAGCTGCCTTTCATCACCATTTTTCCTGAGTAGGGCTTAGTTTTATTCTGGAAA GACATCTCCAAGGTGAGGTCCACCCCCACAGCAGACCTCAAGTAGAAATTGCCCAATTTTTACCAGCTGGAGGGACACCCTTGGGTTTTT GTACGAAGCTATTTAATGAGCCTGTGTCTTGGGGACTCAGCAGGCTGGAGCTTGGGGCCTGGTGGACCATCACCTGGTGTCTGTAGGTGG ACCCGGTCTCCCACAGGTGACATCAACCTGAGGGTGGCGTCTTTAGAGACAGGCACATGGGCAGCCCTGTTCCCTTCGCCTCTACTGCGA >In-frame_ANKRD28_ENST00000399451_chr3_15793257_-_COLQ_ENST00000435459_chr3_15507944_-_2791nt GCGGCCGCGGGGGCTGCCAGGGTATTTCGGGAAGGGGGCGTGAGGAGGCGGCGGCGGCAGCGGCGGGTAGGGCAGGCAGCAGAGGGAAGG AGAAAGAAAGGAAGGAAGAGGGCGGGGAGTCCTCAGAGGAGGAGGCGGGACCGGCCGGGCACCTCACCTCTCGGCGGCGGCGGCGGCGGC GGCGGCGGCGGGCGGCCGGGGAGGCGGCGCCGCCCCCTGCCCGCAGGTCTTCTCAGCGCAGTCGGCCGCGGACCCGCTGGTCCCGGGCAG CGGCCAAGGCTACTGGGGCGGGAGCAGTGGGCCGGTCGGCGGCGGCAGCGGCAGCGGCGGAGGAGGAGGAGGCTGGAGTGGGCGCGGAGG CGACCGCCATGGCGTTCCTCAAACTCCGTGACCAGCCATCACTGGTGCAAGCTATATTTAACGGAGATCCTGATGAAGTTCGAGCACTAA TATTTAAGAAAGAAGATGTTAACTTTCAGGACAATGAAAAGCGAACCCCATTGCACGCCGCAGCTTACCTTGGAGATGCAGAAATCATTG AACTTCTTATTTTATCTGGAGCTAGAGTTAATGCCAAAGACAGCAAATGGTTGACACCTTTACACAGAGCAGTTGCATCTTGTAGTGAGG GACAGAAAGGGGATAGTGGAGTTATGGGCCCACCAGGCAAGCCTGGGCCTTCTGGTCAACCTGGCCGTCCGGGGCCCCCAGGCCCCCCAC CTGCAGGACAACTTATAATGGGACCCAAAGGGGAAAGAGGATTTCCCGGGCCTCCAGGAAGATGTCTTTGTGGACCCACTATGAATGTGA ATAACCCTTCCTACGGGGAATCTGTGTATGGGCCCAGTTCCCCGCGAGTTCCTGTGATTTTTGTGGTCAACAACCAGGAGGAGCTTGAGA GGCTGAACACCCAAAACGCCATTGCCTTCCGCAGAGACCAGAGATCTCTGTACTTCAAGGACAGCCTTGGCTGGCTCCCCATCCAGCTGA CCCCTTTCTACCCTGTGGATTACACTGCAGACCAGCACGGCACCTGTGGGGATGGGCTCCTGCAGCCTGGGGAGGAGTGTGACGACGGTA ACAGCGATGTGGGTGACGACTGCATCCGCTGTCACCGTGCCTACTGTGGAGATGGTCACCGGCATGAGGGTGTGGAGGACTGTGACGGCT CTGACTTTGGCTACCTGACATGCGAGACCTATCTCCCTGGGTCATATGGAGACCTGCAATGCACCCAGTACTGCTACATCGACTCCACGC CCTGCCGCTACTTCACCTGAGGGCCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGGC CATGTCCTGGCCCCGTCTCCACCAACCTTTGTGTGACAAAAACAAGGACAAATTCCTGCTACTAAGACATGCTGTTAACTCAGTCTGACT GGAAGAATTTAGGACCACTGCATCCTGTCTTAATCCAAGGTACTGGAAAACCTTCCACATGCCCAACCTGAGACCTGTTCCCCATCGCTA CCATTTGGCCAAACAACCGGCTACAATGCTCTTCCTCTTCTGGAATGTTGCTGACCCAGGCCGTGGACTTGGCTGAGCACTGTTAGACAC ACACAGACCTGCAGGCTGTTTTAGAATGTTTTGATCTCTTTGGGGAATCTGGAGTACAGGCCTCTCCGCCCCTGACCACCGAAACGTGCA GGCATTCTCACTCACACTGGGCAGCCCGCTGTCGGGTCTCTCTAGGCCTATGAACCACAAAGCAGGGAAGTGGGCACGTTCTCTCGGGGT GGCTCACAGCTTTGAACCTGCCAAAGGACCCCTCGACTGGCCACAGCCCAGCCCAGCCTGACGTGGATGTGGCTGCCCAGGAAAAGACTT AACTGTGAAAAAGTACTGAGAACCCACCTGACCCAGGCTTGCCCCAAGCAGAGGCTAGAGAAGAGGCTCCTCTTCTCAGTGTTTCCCAAA GGGGCGGCTCTTGTGGTTTCAAAATCTCTGGCACCATCTTGACCTCTTGGCTCTCTCTGCACTTTGCCCCCTGTCTCAAAAATGTCCCTC ATGTCCATTTCCTGTCCAGGAGACTCATGAGGACTGTGTGACCTGCACAAGCCCACACCTGGGCAGGCTGTTGGTGTCTCCTTGGTCCTT AGGCAGATACTCCCCTGAGTCCCCGATCTAGGGCCAGCTGCAGAGGGCTCTCTCTAGGCAGAGCGTTCCTGGCCAGAGCTCTACCTCTTT GCCTCCTGCTGACCCCTGACAGCGTCCCGTGGCATTTCTTTCATGTCTGCATATTGCATAGCCTTGTCCTCCTGTGTGCCTGAGCTCCTC CCTTTTCAATAAGATTATTAGTCGTGCATGTCTGTGAGCTGCCTTTCATCACCATTTTTCCTGAGTAGGGCTTAGTTTTATTCTGGAAAG ACATCTCCAAGGTGAGGTCCACCCCCACAGCAGACCTCAAGTAGAAATTGCCCAATTTTTACCAGCTGGAGGGACACCCTTGGGTTTTTG TACGAAGCTATTTAATGAGCCTGTGTCTTGGGGACTCAGCAGGCTGGAGCTTGGGGCCTGGTGGACCATCACCTGGTGTCTGTAGGTGGA CCCGGTCTCCCACAGGTGACATCAACCTGAGGGTGGCGTCTTTAGAGACAGGCACATGGGCAGCCCTGTTCCCTTCGCCTCTACTGCGAG GCCTGGGGAGATGTTGTTTTCATGCTGCTTCCACCATCACACTGGGGTTTCTGGATGGGAAATAAAAAAATAAAGGCAGTTCATTTCCCC >In-frame_ANKRD28_ENST00000399451_chr3_15793257_-_COLQ_ENST00000383787_chr3_15507944_-_2791nt GCGGCCGCGGGGGCTGCCAGGGTATTTCGGGAAGGGGGCGTGAGGAGGCGGCGGCGGCAGCGGCGGGTAGGGCAGGCAGCAGAGGGAAGG AGAAAGAAAGGAAGGAAGAGGGCGGGGAGTCCTCAGAGGAGGAGGCGGGACCGGCCGGGCACCTCACCTCTCGGCGGCGGCGGCGGCGGC GGCGGCGGCGGGCGGCCGGGGAGGCGGCGCCGCCCCCTGCCCGCAGGTCTTCTCAGCGCAGTCGGCCGCGGACCCGCTGGTCCCGGGCAG CGGCCAAGGCTACTGGGGCGGGAGCAGTGGGCCGGTCGGCGGCGGCAGCGGCAGCGGCGGAGGAGGAGGAGGCTGGAGTGGGCGCGGAGG CGACCGCCATGGCGTTCCTCAAACTCCGTGACCAGCCATCACTGGTGCAAGCTATATTTAACGGAGATCCTGATGAAGTTCGAGCACTAA TATTTAAGAAAGAAGATGTTAACTTTCAGGACAATGAAAAGCGAACCCCATTGCACGCCGCAGCTTACCTTGGAGATGCAGAAATCATTG AACTTCTTATTTTATCTGGAGCTAGAGTTAATGCCAAAGACAGCAAATGGTTGACACCTTTACACAGAGCAGTTGCATCTTGTAGTGAGG GACAGAAAGGGGATAGTGGAGTTATGGGCCCACCAGGCAAGCCTGGGCCTTCTGGTCAACCTGGCCGTCCGGGGCCCCCAGGCCCCCCAC CTGCAGGACAACTTATAATGGGACCCAAAGGGGAAAGAGGATTTCCCGGGCCTCCAGGAAGATGTCTTTGTGGACCCACTATGAATGTGA ATAACCCTTCCTACGGGGAATCTGTGTATGGGCCCAGTTCCCCGCGAGTTCCTGTGATTTTTGTGGTCAACAACCAGGAGGAGCTTGAGA GGCTGAACACCCAAAACGCCATTGCCTTCCGCAGAGACCAGAGATCTCTGTACTTCAAGGACAGCCTTGGCTGGCTCCCCATCCAGCTGA CCCCTTTCTACCCTGTGGATTACACTGCAGACCAGCACGGCACCTGTGGGGATGGGCTCCTGCAGCCTGGGGAGGAGTGTGACGACGGTA ACAGCGATGTGGGTGACGACTGCATCCGCTGTCACCGTGCCTACTGTGGAGATGGTCACCGGCATGAGGGTGTGGAGGACTGTGACGGCT CTGACTTTGGCTACCTGACATGCGAGACCTATCTCCCTGGGTCATATGGAGACCTGCAATGCACCCAGTACTGCTACATCGACTCCACGC CCTGCCGCTACTTCACCTGAGGGCCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGGC CATGTCCTGGCCCCGTCTCCACCAACCTTTGTGTGACAAAAACAAGGACAAATTCCTGCTACTAAGACATGCTGTTAACTCAGTCTGACT GGAAGAATTTAGGACCACTGCATCCTGTCTTAATCCAAGGTACTGGAAAACCTTCCACATGCCCAACCTGAGACCTGTTCCCCATCGCTA CCATTTGGCCAAACAACCGGCTACAATGCTCTTCCTCTTCTGGAATGTTGCTGACCCAGGCCGTGGACTTGGCTGAGCACTGTTAGACAC ACACAGACCTGCAGGCTGTTTTAGAATGTTTTGATCTCTTTGGGGAATCTGGAGTACAGGCCTCTCCGCCCCTGACCACCGAAACGTGCA GGCATTCTCACTCACACTGGGCAGCCCGCTGTCGGGTCTCTCTAGGCCTATGAACCACAAAGCAGGGAAGTGGGCACGTTCTCTCGGGGT GGCTCACAGCTTTGAACCTGCCAAAGGACCCCTCGACTGGCCACAGCCCAGCCCAGCCTGACGTGGATGTGGCTGCCCAGGAAAAGACTT AACTGTGAAAAAGTACTGAGAACCCACCTGACCCAGGCTTGCCCCAAGCAGAGGCTAGAGAAGAGGCTCCTCTTCTCAGTGTTTCCCAAA GGGGCGGCTCTTGTGGTTTCAAAATCTCTGGCACCATCTTGACCTCTTGGCTCTCTCTGCACTTTGCCCCCTGTCTCAAAAATGTCCCTC ATGTCCATTTCCTGTCCAGGAGACTCATGAGGACTGTGTGACCTGCACAAGCCCACACCTGGGCAGGCTGTTGGTGTCTCCTTGGTCCTT AGGCAGATACTCCCCTGAGTCCCCGATCTAGGGCCAGCTGCAGAGGGCTCTCTCTAGGCAGAGCGTTCCTGGCCAGAGCTCTACCTCTTT GCCTCCTGCTGACCCCTGACAGCGTCCCGTGGCATTTCTTTCATGTCTGCATATTGCATAGCCTTGTCCTCCTGTGTGCCTGAGCTCCTC CCTTTTCAATAAGATTATTAGTCGTGCATGTCTGTGAGCTGCCTTTCATCACCATTTTTCCTGAGTAGGGCTTAGTTTTATTCTGGAAAG ACATCTCCAAGGTGAGGTCCACCCCCACAGCAGACCTCAAGTAGAAATTGCCCAATTTTTACCAGCTGGAGGGACACCCTTGGGTTTTTG TACGAAGCTATTTAATGAGCCTGTGTCTTGGGGACTCAGCAGGCTGGAGCTTGGGGCCTGGTGGACCATCACCTGGTGTCTGTAGGTGGA CCCGGTCTCCCACAGGTGACATCAACCTGAGGGTGGCGTCTTTAGAGACAGGCACATGGGCAGCCCTGTTCCCTTCGCCTCTACTGCGAG GCCTGGGGAGATGTTGTTTTCATGCTGCTTCCACCATCACACTGGGGTTTCTGGATGGGAAATAAAAAAATAAAGGCAGTTCATTTCCCC >In-frame_ANKRD28_ENST00000399451_chr3_15793257_-_COLQ_ENST00000383788_chr3_15507944_-_2777nt GCGGCCGCGGGGGCTGCCAGGGTATTTCGGGAAGGGGGCGTGAGGAGGCGGCGGCGGCAGCGGCGGGTAGGGCAGGCAGCAGAGGGAAGG AGAAAGAAAGGAAGGAAGAGGGCGGGGAGTCCTCAGAGGAGGAGGCGGGACCGGCCGGGCACCTCACCTCTCGGCGGCGGCGGCGGCGGC GGCGGCGGCGGGCGGCCGGGGAGGCGGCGCCGCCCCCTGCCCGCAGGTCTTCTCAGCGCAGTCGGCCGCGGACCCGCTGGTCCCGGGCAG CGGCCAAGGCTACTGGGGCGGGAGCAGTGGGCCGGTCGGCGGCGGCAGCGGCAGCGGCGGAGGAGGAGGAGGCTGGAGTGGGCGCGGAGG CGACCGCCATGGCGTTCCTCAAACTCCGTGACCAGCCATCACTGGTGCAAGCTATATTTAACGGAGATCCTGATGAAGTTCGAGCACTAA TATTTAAGAAAGAAGATGTTAACTTTCAGGACAATGAAAAGCGAACCCCATTGCACGCCGCAGCTTACCTTGGAGATGCAGAAATCATTG AACTTCTTATTTTATCTGGAGCTAGAGTTAATGCCAAAGACAGCAAATGGTTGACACCTTTACACAGAGCAGTTGCATCTTGTAGTGAGG GACAGAAAGGGGATAGTGGAGTTATGGGCCCACCAGGCAAGCCTGGGCCTTCTGGTCAACCTGGCCGTCCGGGGCCCCCAGGCCCCCCAC CTGCAGGACAACTTATAATGGGACCCAAAGGGGAAAGAGGATTTCCCGGGCCTCCAGGAAGATGTCTTTGTGGACCCACTATGAATGTGA ATAACCCTTCCTACGGGGAATCTGTGTATGGGCCCAGTTCCCCGCGAGTTCCTGTGATTTTTGTGGTCAACAACCAGGAGGAGCTTGAGA GGCTGAACACCCAAAACGCCATTGCCTTCCGCAGAGACCAGAGATCTCTGTACTTCAAGGACAGCCTTGGCTGGCTCCCCATCCAGCTGA CCCCTTTCTACCCTGTGGATTACACTGCAGACCAGCACGGCACCTGTGGGGATGGGCTCCTGCAGCCTGGGGAGGAGTGTGACGACGGTA ACAGCGATGTGGGTGACGACTGCATCCGCTGTCACCGTGCCTACTGTGGAGATGGTCACCGGCATGAGGGTGTGGAGGACTGTGACGGCT CTGACTTTGGCTACCTGACATGCGAGACCTATCTCCCTGGGTCATATGGAGACCTGCAATGCACCCAGTACTGCTACATCGACTCCACGC CCTGCCGCTACTTCACCTGAGGGCCGTGAGGAGAAGGTGGGCTGCGCCCCACAGAACTGGCAGCAGCTTCTCCACTGTCATCAAACTGGC CATGTCCTGGCCCCGTCTCCACCAACCTTTGTGTGACAAAAACAAGGACAAATTCCTGCTACTAAGACATGCTGTTAACTCAGTCTGACT GGAAGAATTTAGGACCACTGCATCCTGTCTTAATCCAAGGTACTGGAAAACCTTCCACATGCCCAACCTGAGACCTGTTCCCCATCGCTA CCATTTGGCCAAACAACCGGCTACAATGCTCTTCCTCTTCTGGAATGTTGCTGACCCAGGCCGTGGACTTGGCTGAGCACTGTTAGACAC ACACAGACCTGCAGGCTGTTTTAGAATGTTTTGATCTCTTTGGGGAATCTGGAGTACAGGCCTCTCCGCCCCTGACCACCGAAACGTGCA GGCATTCTCACTCACACTGGGCAGCCCGCTGTCGGGTCTCTCTAGGCCTATGAACCACAAAGCAGGGAAGTGGGCACGTTCTCTCGGGGT GGCTCACAGCTTTGAACCTGCCAAAGGACCCCTCGACTGGCCACAGCCCAGCCCAGCCTGACGTGGATGTGGCTGCCCAGGAAAAGACTT AACTGTGAAAAAGTACTGAGAACCCACCTGACCCAGGCTTGCCCCAAGCAGAGGCTAGAGAAGAGGCTCCTCTTCTCAGTGTTTCCCAAA GGGGCGGCTCTTGTGGTTTCAAAATCTCTGGCACCATCTTGACCTCTTGGCTCTCTCTGCACTTTGCCCCCTGTCTCAAAAATGTCCCTC ATGTCCATTTCCTGTCCAGGAGACTCATGAGGACTGTGTGACCTGCACAAGCCCACACCTGGGCAGGCTGTTGGTGTCTCCTTGGTCCTT AGGCAGATACTCCCCTGAGTCCCCGATCTAGGGCCAGCTGCAGAGGGCTCTCTCTAGGCAGAGCGTTCCTGGCCAGAGCTCTACCTCTTT GCCTCCTGCTGACCCCTGACAGCGTCCCGTGGCATTTCTTTCATGTCTGCATATTGCATAGCCTTGTCCTCCTGTGTGCCTGAGCTCCTC CCTTTTCAATAAGATTATTAGTCGTGCATGTCTGTGAGCTGCCTTTCATCACCATTTTTCCTGAGTAGGGCTTAGTTTTATTCTGGAAAG ACATCTCCAAGGTGAGGTCCACCCCCACAGCAGACCTCAAGTAGAAATTGCCCAATTTTTACCAGCTGGAGGGACACCCTTGGGTTTTTG TACGAAGCTATTTAATGAGCCTGTGTCTTGGGGACTCAGCAGGCTGGAGCTTGGGGCCTGGTGGACCATCACCTGGTGTCTGTAGGTGGA CCCGGTCTCCCACAGGTGACATCAACCTGAGGGTGGCGTCTTTAGAGACAGGCACATGGGCAGCCCTGTTCCCTTCGCCTCTACTGCGAG |
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FusionGenePPI for ANKRD28_COLQ |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
ANKRD28 | TBK1, USP21, USP49, PLK1, PPP6C, SIRT7, AP2M1, BRCA1, ZNF512B, TGM2, CSNK2B, AGPAT2, FBXO6, USP10, ACACB, AKAP8L, ANKRD44, APC, ARHGEF2, CEP192, DNAJB1, EPS8, FAM175B, FAM193A, FBF1, HECTD1, CEP162, KRI1, MAGED1, MTMR3, NEK4, NFATC4, NOTCH2, PLEKHG1, PPP1R9A, PPP1R9B, PPP6R1, PPP6R2, PPP6R3, RAD21, RASSF8, RCN2, SDCCAG3, SEC16A, SHKBP1, SMC1A, SMC3, SNX18, TBKBP1, TRIM41, UBR5, MOB1A, MOB1B, CTTNBP2NL, FLNC, LEO1, HOXC4, NECAP2, SDCBP, FOXD4L6, DCLRE1C, PLK2, NTRK1, CEP128, CEP44, CNTRL, ODF2, RPGRIP1L, CEP19, LCA5, XRCC6, FOXK1, FOXK2, ZNRF2, ZNF574, TRMT2A, ZNF785, CIRH1A, CAMK4, CDKL1, MRPS7, DFNB31, TRIM25 | COLQ | BCHE, P3H2, FN1, TRIM68, LEPREL2, CRTAP, COLGALT2, FBLN1, P3H4, PLOD1, PLOD2, P4HA1, P3H1, TEX15, COL4A2, POLR2A |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for ANKRD28_COLQ |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for ANKRD28_COLQ |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Tgene | COLQ | C1864233 | ENDPLATE ACETYLCHOLINESTERASE DEFICIENCY (disorder) | 4 | CTD_human;UNIPROT |