FusionGDB Logo

Home

Download

Statistics

Examples

Help

Contact

Center for Computational Systems Medicine
leaf

FusionGeneSummary

leaf

FusionProtFeature

leaf

FusionGeneSequence

leaf

FusionGenePPI

leaf

RelatedDrugs

leaf

RelatedDiseases

Fusion gene ID: 18041

FusionGeneSummary for JAZF1_CPT1C

check button Fusion gene summary
Fusion gene informationFusion gene name: JAZF1_CPT1C
Fusion gene ID: 18041
HgeneTgene
Gene symbol

JAZF1

CPT1C

Gene ID

221895

126129

Gene nameJAZF zinc finger 1carnitine palmitoyltransferase 1C
SynonymsTIP27|ZNF802CATL1|CPT1-B|CPT1P|CPTI-B|CPTIC|SPG73
Cytomap

7p15.2-p15.1

19q13.33

Type of geneprotein-codingprotein-coding
Descriptionjuxtaposed with another zinc finger protein 1TAK1-interacting protein 27juxtaposed with another zinc finger gene 1zinc finger protein 802carnitine O-palmitoyltransferase 1, brain isoformcarnitine O-palmitoyltransferase I, brain isoformcarnitine palmitoyltransferase I related C
Modification date2018052320180523
UniProtAcc

Q86VZ6

Q8TCG5

Ensembl transtripts involved in fusion geneENST00000283928, ENST00000466516, 
ENST00000323446, ENST00000392518, 
ENST00000598293, ENST00000354199, 
ENST00000405931, ENST00000598714, 
Fusion gene scores* DoF score13 X 7 X 7=6371 X 1 X 1=1
# samples 131
** MAII scorelog2(13/637*10)=-2.29278174922785
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
log2(1/1*10)=3.32192809488736
Context

PubMed: JAZF1 [Title/Abstract] AND CPT1C [Title/Abstract] AND fusion [Title/Abstract]

Functional or gene categories assigned by FusionGDB annotationOncogene involved fusion gene, in-frame and retained their domain.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgeneJAZF1

GO:0000122

negative regulation of transcription by RNA polymerase II

15302918


check button Fusion gene information from three resources
(ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018))
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
Data typeSourceCancer typeSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
TCGALDGBMTCGA-32-1970-01AJAZF1chr7

28220082

-CPT1Cchr19

50211980

+
* LD: Li Ding group's fusion gene list
  RV: Roel Verhaak group's fusion gene list
  ChiTaRs fusion database

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
In-frameENST00000283928ENST00000323446JAZF1chr7

28220082

-CPT1Cchr19

50211980

+
In-frameENST00000283928ENST00000392518JAZF1chr7

28220082

-CPT1Cchr19

50211980

+
In-frameENST00000283928ENST00000598293JAZF1chr7

28220082

-CPT1Cchr19

50211980

+
In-frameENST00000283928ENST00000354199JAZF1chr7

28220082

-CPT1Cchr19

50211980

+
In-frameENST00000283928ENST00000405931JAZF1chr7

28220082

-CPT1Cchr19

50211980

+
5CDS-intronENST00000283928ENST00000598714JAZF1chr7

28220082

-CPT1Cchr19

50211980

+
intron-3CDSENST00000466516ENST00000323446JAZF1chr7

28220082

-CPT1Cchr19

50211980

+
intron-3CDSENST00000466516ENST00000392518JAZF1chr7

28220082

-CPT1Cchr19

50211980

+
intron-3CDSENST00000466516ENST00000598293JAZF1chr7

28220082

-CPT1Cchr19

50211980

+
intron-3CDSENST00000466516ENST00000354199JAZF1chr7

28220082

-CPT1Cchr19

50211980

+
intron-3CDSENST00000466516ENST00000405931JAZF1chr7

28220082

-CPT1Cchr19

50211980

+
intron-intronENST00000466516ENST00000598714JAZF1chr7

28220082

-CPT1Cchr19

50211980

+

Top

FusionProtFeatures for JAZF1_CPT1C


check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
JAZF1

Q86VZ6

CPT1C

Q8TCG5

Acts as a transcriptional corepressor of orphan nuclearreceptor NR2C2 (PubMed:15302918). Inhibits expression of thegluconeogenesis enzyme PCK2 through inhibition of NR2C2 activity(By similarity). Also involved in transcriptional activation ofNAMPT by promoting expression of PPARA and PPARD (By similarity).Plays a role in lipid metabolism by suppressing lipogenesis,increasing lipolysis and decreasing lipid accumulation in adiposetissue (By similarity). Plays a role in glucose homeostasis byimproving glucose metabolism and insulin sensitivity (Bysimilarity). {ECO:0000250|UniProtKB:Q80ZQ5,ECO:0000269|PubMed:15302918}. May play a role in lipid metabolic process.{ECO:0000269|PubMed:25751282}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page

.

* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
>>>>>
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneJAZF1chr7:28220082chr19:50211980ENST00000283928-1512_3738244Zinc fingerNote=C2H2-type 1
TgeneCPT1Cchr7:28220082chr19:50211980ENST00000323446+1119552_564483804RegionCoenzyme A binding
TgeneCPT1Cchr7:28220082chr19:50211980ENST00000354199+1218552_564483715RegionCoenzyme A binding
TgeneCPT1Cchr7:28220082chr19:50211980ENST00000392518+1220552_564483804RegionCoenzyme A binding
TgeneCPT1Cchr7:28220082chr19:50211980ENST00000405931+1220552_564472793RegionCoenzyme A binding
TgeneCPT1Cchr7:28220082chr19:50211980ENST00000598293+1220552_564483804RegionCoenzyme A binding

- In-frame and not-retained protein feature among the 13 regional features.
>>
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneJAZF1chr7:28220082chr19:50211980ENST00000283928-15173_19838244Zinc fingerNote=C2H2-type 2
HgeneJAZF1chr7:28220082chr19:50211980ENST00000283928-15208_23038244Zinc fingerNote=C2H2-type 3%3B degenerate
TgeneCPT1Cchr7:28220082chr19:50211980ENST00000323446+1119127_803483804Topological domainCytoplasmic
TgeneCPT1Cchr7:28220082chr19:50211980ENST00000323446+11191_52483804Topological domainCytoplasmic
TgeneCPT1Cchr7:28220082chr19:50211980ENST00000323446+111976_103483804Topological domainMitochondrial intermembrane
TgeneCPT1Cchr7:28220082chr19:50211980ENST00000354199+1218127_803483715Topological domainCytoplasmic
TgeneCPT1Cchr7:28220082chr19:50211980ENST00000354199+12181_52483715Topological domainCytoplasmic
TgeneCPT1Cchr7:28220082chr19:50211980ENST00000354199+121876_103483715Topological domainMitochondrial intermembrane
TgeneCPT1Cchr7:28220082chr19:50211980ENST00000392518+1220127_803483804Topological domainCytoplasmic
TgeneCPT1Cchr7:28220082chr19:50211980ENST00000392518+12201_52483804Topological domainCytoplasmic
TgeneCPT1Cchr7:28220082chr19:50211980ENST00000392518+122076_103483804Topological domainMitochondrial intermembrane
TgeneCPT1Cchr7:28220082chr19:50211980ENST00000405931+1220127_803472793Topological domainCytoplasmic
TgeneCPT1Cchr7:28220082chr19:50211980ENST00000405931+12201_52472793Topological domainCytoplasmic
TgeneCPT1Cchr7:28220082chr19:50211980ENST00000405931+122076_103472793Topological domainMitochondrial intermembrane
TgeneCPT1Cchr7:28220082chr19:50211980ENST00000598293+1220127_803483804Topological domainCytoplasmic
TgeneCPT1Cchr7:28220082chr19:50211980ENST00000598293+12201_52483804Topological domainCytoplasmic
TgeneCPT1Cchr7:28220082chr19:50211980ENST00000598293+122076_103483804Topological domainMitochondrial intermembrane
TgeneCPT1Cchr7:28220082chr19:50211980ENST00000323446+1119104_126483804TransmembraneHelical
TgeneCPT1Cchr7:28220082chr19:50211980ENST00000323446+111953_75483804TransmembraneHelical
TgeneCPT1Cchr7:28220082chr19:50211980ENST00000354199+1218104_126483715TransmembraneHelical
TgeneCPT1Cchr7:28220082chr19:50211980ENST00000354199+121853_75483715TransmembraneHelical
TgeneCPT1Cchr7:28220082chr19:50211980ENST00000392518+1220104_126483804TransmembraneHelical
TgeneCPT1Cchr7:28220082chr19:50211980ENST00000392518+122053_75483804TransmembraneHelical
TgeneCPT1Cchr7:28220082chr19:50211980ENST00000405931+1220104_126472793TransmembraneHelical
TgeneCPT1Cchr7:28220082chr19:50211980ENST00000405931+122053_75472793TransmembraneHelical
TgeneCPT1Cchr7:28220082chr19:50211980ENST00000598293+1220104_126483804TransmembraneHelical
TgeneCPT1Cchr7:28220082chr19:50211980ENST00000598293+122053_75483804TransmembraneHelical


Top

FusionGeneSequence for JAZF1_CPT1C


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences.
(nt: nucleotides, aa: amino acids)

* Fusion amino acid sequences.
>In-frame_JAZF1_ENST00000283928_chr7_28220082_-_CPT1C_ENST00000323446_chr19_50211980_+_359aa
MTGIAAASFFSNTCRFGGCGLHFPTLADLIEHIEDNHIVHSGYRMLSAGLLNRRPLQGAPGPHTTPAPAAAMGPSRPDPLLHLSSPEGSQ
DLVXKCRLPCRSILPIWQELHPTLPPLFRQLHPDRLATGPLPGQGSILPDLXVGHDSLIPGRPDGDGAVLHEGGLQLCQGHGGQREDGPT
VPRPVPRGSGQAPGSAEGSHERAGSXPPPVCAVHRVPIPPPAVALPDPGPFGAVAAVHQPDPCSANASVXRPQLPGLCFLRRWIRACXXP

>In-frame_JAZF1_ENST00000283928_chr7_28220082_-_CPT1C_ENST00000392518_chr19_50211980_+_359aa
MTGIAAASFFSNTCRFGGCGLHFPTLADLIEHIEDNHIVHSGYRMLSAGLLNRRPLQGAPGPHTTPAPAAAMGPSRPDPLLHLSSPEGSQ
DLVXKCRLPCRSILPIWQELHPTLPPLFRQLHPDRLATGPLPGQGSILPDLXVGHDSLIPGRPDGDGAVLHEGGLQLCQGHGGQREDGPT
VPRPVPRGSGQAPGSAEGSHERAGSXPPPVCAVHRVPIPPPAVALPDPGPFGAVAAVHQPDPCSANASVXRPQLPGLCFLRRWIRACXXP

>In-frame_JAZF1_ENST00000283928_chr7_28220082_-_CPT1C_ENST00000598293_chr19_50211980_+_359aa
MTGIAAASFFSNTCRFGGCGLHFPTLADLIEHIEDNHIVHSGYRMLSAGLLNRRPLQGAPGPHTTPAPAAAMGPSRPDPLLHLSSPEGSQ
DLVXKCRLPCRSILPIWQELHPTLPPLFRQLHPDRLATGPLPGQGSILPDLXVGHDSLIPGRPDGDGAVLHEGGLQLCQGHGGQREDGPT
VPRPVPRGSGQAPGSAEGSHERAGSXPPPVCAVHRVPIPPPAVALPDPGPFGAVAAVHQPDPCSANASVXRPQLPGLCFLRRWIRACXXP

>In-frame_JAZF1_ENST00000283928_chr7_28220082_-_CPT1C_ENST00000354199_chr19_50211980_+_270aa
MTGIAAASFFSNTCRFGGCGLHFPTLADLIEHIEDNHIVHSGYRMLSAGLLNRRPLQGAPGPHTTPAPAAAMGPSRPDPLLHLSSPEGSQ
DLVXKCRLPCRSILPIWQELHPTLPPLFRQLHPDRLATGPLPGQGSILPDLXVGHDSLIPGRPDGDGAVLHEGGLQLCQGHGGQREDGXX
PWLWCFLYLHGGWHDHLPHLQQKIKHKNGFPQAGAAHXGRTAGCGLPVPGGTAFXAPVQRVREGELQAQVWISLPPDWGLQGLNDIHRLL

>In-frame_JAZF1_ENST00000283928_chr7_28220082_-_CPT1C_ENST00000405931_chr19_50211980_+_359aa
MTGIAAASFFSNTCRFGGCGLHFPTLADLIEHIEDNHIVHSGYRMLSAGLLNRRPLQGAPGPHTTPAPAAAMGPSRPDPLLHLSSPEGSQ
DLVXKCRLPCRSILPIWQELHPTLPPLFRQLHPDRLATGPLPGQGSILPDLXVGHDSLIPGRPDGDGAVLHEGGLQLCQGHGGQREDGPT
VPRPVPRGSGQAPGSAEGSHERAGSXPPPVCAVHRVPIPPPAVALPDPGPFGAVAAVHQPDPCSANASVXRPQLPGLCFLRRWIRACXXP


* Fusion transcript sequences (only coding sequence (CDS) region).
>In-frame_JAZF1_ENST00000283928_chr7_28220082_-_CPT1C_ENST00000323446_chr19_50211980_+_1078nt
ATGACAGGCATCGCCGCCGCCTCCTTCTTCTCCAATACCTGCCGATTCGGGGGCTGCGGACTCCACTTCCCCACCCTGGCCGACCTCATC
GAGCACATCGAGGACAACCACATCGTTCACTCTGGCTACAGAATGCTTTCAGCTGGGCTACTCAACAGACGGCCACTGCAAGGGGCACCC
GGACCCCACACTACCCCAGCCCCAGCGGCTGCAATGGGACCTTCCAGACCAGATCCACTCCTCCATCTCTCTAGCCCTGAGGGGAGCCAA
GATCTTGTCTGAAAATGTCGACTGCCATGTCGTTCCATTCTCCCTATTTGGCAAGAGCTTCATCCGACGCTGCCACCTCTCTTCAGACAG
CTTCATCCAGATCGCCTTGCAACTGGCCCACTTCCGGGACAGGGGTCAATTCTGCCTGACTTATGAGTCGGCCATGACTCGCTTATTCCT
GGAAGGCCGGACGGAGACGGTGCGGTCTTGCACGAGGGAGGCCTGCAACTTTGTCAGGGCCATGGAGGACAAAGAGAAGACGGACCCACA
GTGCCTCGCCCTGTTCCGCGTGGCAGTGGACAAGCACCAGGCTCTGCTGAAGGCAGCCATGAGCGGGCAGGGAGTTGACCGCCACCTGTT
TGCGCTGTACATCGTGTCCCGATTCCTCCACCTGCAGTCGCCCTTCCTGACCCAGGTCCATTCGGAGCAGTGGCAGCTGTCCACCAGCCA
GATCCCTGTTCAGCAAATGCATCTGTTTGACGTCCACAATTACCCGGACTATGTTTCCTCAGGCGGTGGATTCGGGCCTGCTGATGACCA
TGGTTATGGTGTTTCTTATATCTTCATGGGGGATGGCATGATCACCTTCCACATCTCCAGCAAAAAATCAAGCACAAAAACGGATTCCCA
CAGGCTGGGGCAGCACATTGAGGACGCACTGCTGGATGTGGCCTCCCTGTTCCAGGCGGGACAGCATTTTAAGCGCCGGTTCAGAGGGTC

>In-frame_JAZF1_ENST00000283928_chr7_28220082_-_CPT1C_ENST00000392518_chr19_50211980_+_1078nt
ATGACAGGCATCGCCGCCGCCTCCTTCTTCTCCAATACCTGCCGATTCGGGGGCTGCGGACTCCACTTCCCCACCCTGGCCGACCTCATC
GAGCACATCGAGGACAACCACATCGTTCACTCTGGCTACAGAATGCTTTCAGCTGGGCTACTCAACAGACGGCCACTGCAAGGGGCACCC
GGACCCCACACTACCCCAGCCCCAGCGGCTGCAATGGGACCTTCCAGACCAGATCCACTCCTCCATCTCTCTAGCCCTGAGGGGAGCCAA
GATCTTGTCTGAAAATGTCGACTGCCATGTCGTTCCATTCTCCCTATTTGGCAAGAGCTTCATCCGACGCTGCCACCTCTCTTCAGACAG
CTTCATCCAGATCGCCTTGCAACTGGCCCACTTCCGGGACAGGGGTCAATTCTGCCTGACTTATGAGTCGGCCATGACTCGCTTATTCCT
GGAAGGCCGGACGGAGACGGTGCGGTCTTGCACGAGGGAGGCCTGCAACTTTGTCAGGGCCATGGAGGACAAAGAGAAGACGGACCCACA
GTGCCTCGCCCTGTTCCGCGTGGCAGTGGACAAGCACCAGGCTCTGCTGAAGGCAGCCATGAGCGGGCAGGGAGTTGACCGCCACCTGTT
TGCGCTGTACATCGTGTCCCGATTCCTCCACCTGCAGTCGCCCTTCCTGACCCAGGTCCATTCGGAGCAGTGGCAGCTGTCCACCAGCCA
GATCCCTGTTCAGCAAATGCATCTGTTTGACGTCCACAATTACCCGGACTATGTTTCCTCAGGCGGTGGATTCGGGCCTGCTGATGACCA
TGGTTATGGTGTTTCTTATATCTTCATGGGGGATGGCATGATCACCTTCCACATCTCCAGCAAAAAATCAAGCACAAAAACGGATTCCCA
CAGGCTGGGGCAGCACATTGAGGACGCACTGCTGGATGTGGCCTCCCTGTTCCAGGCGGGACAGCATTTTAAGCGCCGGTTCAGAGGGTC

>In-frame_JAZF1_ENST00000283928_chr7_28220082_-_CPT1C_ENST00000598293_chr19_50211980_+_1078nt
ATGACAGGCATCGCCGCCGCCTCCTTCTTCTCCAATACCTGCCGATTCGGGGGCTGCGGACTCCACTTCCCCACCCTGGCCGACCTCATC
GAGCACATCGAGGACAACCACATCGTTCACTCTGGCTACAGAATGCTTTCAGCTGGGCTACTCAACAGACGGCCACTGCAAGGGGCACCC
GGACCCCACACTACCCCAGCCCCAGCGGCTGCAATGGGACCTTCCAGACCAGATCCACTCCTCCATCTCTCTAGCCCTGAGGGGAGCCAA
GATCTTGTCTGAAAATGTCGACTGCCATGTCGTTCCATTCTCCCTATTTGGCAAGAGCTTCATCCGACGCTGCCACCTCTCTTCAGACAG
CTTCATCCAGATCGCCTTGCAACTGGCCCACTTCCGGGACAGGGGTCAATTCTGCCTGACTTATGAGTCGGCCATGACTCGCTTATTCCT
GGAAGGCCGGACGGAGACGGTGCGGTCTTGCACGAGGGAGGCCTGCAACTTTGTCAGGGCCATGGAGGACAAAGAGAAGACGGACCCACA
GTGCCTCGCCCTGTTCCGCGTGGCAGTGGACAAGCACCAGGCTCTGCTGAAGGCAGCCATGAGCGGGCAGGGAGTTGACCGCCACCTGTT
TGCGCTGTACATCGTGTCCCGATTCCTCCACCTGCAGTCGCCCTTCCTGACCCAGGTCCATTCGGAGCAGTGGCAGCTGTCCACCAGCCA
GATCCCTGTTCAGCAAATGCATCTGTTTGACGTCCACAATTACCCGGACTATGTTTCCTCAGGCGGTGGATTCGGGCCTGCTGATGACCA
TGGTTATGGTGTTTCTTATATCTTCATGGGGGATGGCATGATCACCTTCCACATCTCCAGCAAAAAATCAAGCACAAAAACGGATTCCCA
CAGGCTGGGGCAGCACATTGAGGACGCACTGCTGGATGTGGCCTCCCTGTTCCAGGCGGGACAGCATTTTAAGCGCCGGTTCAGAGGGTC

>In-frame_JAZF1_ENST00000283928_chr7_28220082_-_CPT1C_ENST00000354199_chr19_50211980_+_811nt
ATGACAGGCATCGCCGCCGCCTCCTTCTTCTCCAATACCTGCCGATTCGGGGGCTGCGGACTCCACTTCCCCACCCTGGCCGACCTCATC
GAGCACATCGAGGACAACCACATCGTTCACTCTGGCTACAGAATGCTTTCAGCTGGGCTACTCAACAGACGGCCACTGCAAGGGGCACCC
GGACCCCACACTACCCCAGCCCCAGCGGCTGCAATGGGACCTTCCAGACCAGATCCACTCCTCCATCTCTCTAGCCCTGAGGGGAGCCAA
GATCTTGTCTGAAAATGTCGACTGCCATGTCGTTCCATTCTCCCTATTTGGCAAGAGCTTCATCCGACGCTGCCACCTCTCTTCAGACAG
CTTCATCCAGATCGCCTTGCAACTGGCCCACTTCCGGGACAGGGGTCAATTCTGCCTGACTTATGAGTCGGCCATGACTCGCTTATTCCT
GGAAGGCCGGACGGAGACGGTGCGGTCTTGCACGAGGGAGGCCTGCAACTTTGTCAGGGCCATGGAGGACAAAGAGAAGACGGCTGATGA
CCATGGTTATGGTGTTTCTTATATCTTCATGGGGGATGGCATGATCACCTTCCACATCTCCAGCAAAAAATCAAGCACAAAAACGGATTC
CCACAGGCTGGGGCAGCACATTGAGGACGCACTGCTGGATGTGGCCTCCCTGTTCCAGGCGGGACAGCATTTTAAGCGCCGGTTCAGAGG
GTCAGGGAAGGAGAACTCCAGGCACAGGTGTGGATTTCTCTCCCGCCAGACTGGGGCCTCCAAGGCCTCAATGACATCCACCGACTTCTG

>In-frame_JAZF1_ENST00000283928_chr7_28220082_-_CPT1C_ENST00000405931_chr19_50211980_+_1078nt
ATGACAGGCATCGCCGCCGCCTCCTTCTTCTCCAATACCTGCCGATTCGGGGGCTGCGGACTCCACTTCCCCACCCTGGCCGACCTCATC
GAGCACATCGAGGACAACCACATCGTTCACTCTGGCTACAGAATGCTTTCAGCTGGGCTACTCAACAGACGGCCACTGCAAGGGGCACCC
GGACCCCACACTACCCCAGCCCCAGCGGCTGCAATGGGACCTTCCAGACCAGATCCACTCCTCCATCTCTCTAGCCCTGAGGGGAGCCAA
GATCTTGTCTGAAAATGTCGACTGCCATGTCGTTCCATTCTCCCTATTTGGCAAGAGCTTCATCCGACGCTGCCACCTCTCTTCAGACAG
CTTCATCCAGATCGCCTTGCAACTGGCCCACTTCCGGGACAGGGGTCAATTCTGCCTGACTTATGAGTCGGCCATGACTCGCTTATTCCT
GGAAGGCCGGACGGAGACGGTGCGGTCTTGCACGAGGGAGGCCTGCAACTTTGTCAGGGCCATGGAGGACAAAGAGAAGACGGACCCACA
GTGCCTCGCCCTGTTCCGCGTGGCAGTGGACAAGCACCAGGCTCTGCTGAAGGCAGCCATGAGCGGGCAGGGAGTTGACCGCCACCTGTT
TGCGCTGTACATCGTGTCCCGATTCCTCCACCTGCAGTCGCCCTTCCTGACCCAGGTCCATTCGGAGCAGTGGCAGCTGTCCACCAGCCA
GATCCCTGTTCAGCAAATGCATCTGTTTGACGTCCACAATTACCCGGACTATGTTTCCTCAGGCGGTGGATTCGGGCCTGCTGATGACCA
TGGTTATGGTGTTTCTTATATCTTCATGGGGGATGGCATGATCACCTTCCACATCTCCAGCAAAAAATCAAGCACAAAAACGGATTCCCA
CAGGCTGGGGCAGCACATTGAGGACGCACTGCTGGATGTGGCCTCCCTGTTCCAGGCGGGACAGCATTTTAAGCGCCGGTTCAGAGGGTC


* Fusion transcript sequences (Full-length transcript).
>In-frame_JAZF1_ENST00000283928_chr7_28220082_-_CPT1C_ENST00000323446_chr19_50211980_+_1370nt
ATCTCTCTCGCCCCCTCTCCCTCCGTCCCGTCCTCGCCGCTCCCCTCACCCCGCCTCTCTCCCCCTCCCCCAGCCCCTCCTCTCCTCACC
CCACCCGGCCTCCCTCCCTCCCTCGCCCGCCCGGCGCTCGCAGAGCCGACACCAGGGGGGCTCTCGATGTAGCACCATGACAGGCATCGC
CGCCGCCTCCTTCTTCTCCAATACCTGCCGATTCGGGGGCTGCGGACTCCACTTCCCCACCCTGGCCGACCTCATCGAGCACATCGAGGA
CAACCACATCGTTCACTCTGGCTACAGAATGCTTTCAGCTGGGCTACTCAACAGACGGCCACTGCAAGGGGCACCCGGACCCCACACTAC
CCCAGCCCCAGCGGCTGCAATGGGACCTTCCAGACCAGATCCACTCCTCCATCTCTCTAGCCCTGAGGGGAGCCAAGATCTTGTCTGAAA
ATGTCGACTGCCATGTCGTTCCATTCTCCCTATTTGGCAAGAGCTTCATCCGACGCTGCCACCTCTCTTCAGACAGCTTCATCCAGATCG
CCTTGCAACTGGCCCACTTCCGGGACAGGGGTCAATTCTGCCTGACTTATGAGTCGGCCATGACTCGCTTATTCCTGGAAGGCCGGACGG
AGACGGTGCGGTCTTGCACGAGGGAGGCCTGCAACTTTGTCAGGGCCATGGAGGACAAAGAGAAGACGGACCCACAGTGCCTCGCCCTGT
TCCGCGTGGCAGTGGACAAGCACCAGGCTCTGCTGAAGGCAGCCATGAGCGGGCAGGGAGTTGACCGCCACCTGTTTGCGCTGTACATCG
TGTCCCGATTCCTCCACCTGCAGTCGCCCTTCCTGACCCAGGTCCATTCGGAGCAGTGGCAGCTGTCCACCAGCCAGATCCCTGTTCAGC
AAATGCATCTGTTTGACGTCCACAATTACCCGGACTATGTTTCCTCAGGCGGTGGATTCGGGCCTGCTGATGACCATGGTTATGGTGTTT
CTTATATCTTCATGGGGGATGGCATGATCACCTTCCACATCTCCAGCAAAAAATCAAGCACAAAAACGGATTCCCACAGGCTGGGGCAGC
ACATTGAGGACGCACTGCTGGATGTGGCCTCCCTGTTCCAGGCGGGACAGCATTTTAAGCGCCGGTTCAGAGGGTCAGGGAAGGAGAACT
CCAGGCACAGGTGTGGATTTCTCTCCCGCCAGACTGGGGCCTCCAAGGCCTCAATGACATCCACCGACTTCTGACTCCTTCCAGCAGGCA
GCTGGCCTCTCCAAGGAATAAGGGTGAAATTGCCACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCA

>In-frame_JAZF1_ENST00000283928_chr7_28220082_-_CPT1C_ENST00000392518_chr19_50211980_+_1370nt
ATCTCTCTCGCCCCCTCTCCCTCCGTCCCGTCCTCGCCGCTCCCCTCACCCCGCCTCTCTCCCCCTCCCCCAGCCCCTCCTCTCCTCACC
CCACCCGGCCTCCCTCCCTCCCTCGCCCGCCCGGCGCTCGCAGAGCCGACACCAGGGGGGCTCTCGATGTAGCACCATGACAGGCATCGC
CGCCGCCTCCTTCTTCTCCAATACCTGCCGATTCGGGGGCTGCGGACTCCACTTCCCCACCCTGGCCGACCTCATCGAGCACATCGAGGA
CAACCACATCGTTCACTCTGGCTACAGAATGCTTTCAGCTGGGCTACTCAACAGACGGCCACTGCAAGGGGCACCCGGACCCCACACTAC
CCCAGCCCCAGCGGCTGCAATGGGACCTTCCAGACCAGATCCACTCCTCCATCTCTCTAGCCCTGAGGGGAGCCAAGATCTTGTCTGAAA
ATGTCGACTGCCATGTCGTTCCATTCTCCCTATTTGGCAAGAGCTTCATCCGACGCTGCCACCTCTCTTCAGACAGCTTCATCCAGATCG
CCTTGCAACTGGCCCACTTCCGGGACAGGGGTCAATTCTGCCTGACTTATGAGTCGGCCATGACTCGCTTATTCCTGGAAGGCCGGACGG
AGACGGTGCGGTCTTGCACGAGGGAGGCCTGCAACTTTGTCAGGGCCATGGAGGACAAAGAGAAGACGGACCCACAGTGCCTCGCCCTGT
TCCGCGTGGCAGTGGACAAGCACCAGGCTCTGCTGAAGGCAGCCATGAGCGGGCAGGGAGTTGACCGCCACCTGTTTGCGCTGTACATCG
TGTCCCGATTCCTCCACCTGCAGTCGCCCTTCCTGACCCAGGTCCATTCGGAGCAGTGGCAGCTGTCCACCAGCCAGATCCCTGTTCAGC
AAATGCATCTGTTTGACGTCCACAATTACCCGGACTATGTTTCCTCAGGCGGTGGATTCGGGCCTGCTGATGACCATGGTTATGGTGTTT
CTTATATCTTCATGGGGGATGGCATGATCACCTTCCACATCTCCAGCAAAAAATCAAGCACAAAAACGGATTCCCACAGGCTGGGGCAGC
ACATTGAGGACGCACTGCTGGATGTGGCCTCCCTGTTCCAGGCGGGACAGCATTTTAAGCGCCGGTTCAGAGGGTCAGGGAAGGAGAACT
CCAGGCACAGGTGTGGATTTCTCTCCCGCCAGACTGGGGCCTCCAAGGCCTCAATGACATCCACCGACTTCTGACTCCTTCCAGCAGGCA
GCTGGCCTCTCCAAGGAATAAGGGTGAAATTGCCACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCA

>In-frame_JAZF1_ENST00000283928_chr7_28220082_-_CPT1C_ENST00000598293_chr19_50211980_+_1311nt
ATCTCTCTCGCCCCCTCTCCCTCCGTCCCGTCCTCGCCGCTCCCCTCACCCCGCCTCTCTCCCCCTCCCCCAGCCCCTCCTCTCCTCACC
CCACCCGGCCTCCCTCCCTCCCTCGCCCGCCCGGCGCTCGCAGAGCCGACACCAGGGGGGCTCTCGATGTAGCACCATGACAGGCATCGC
CGCCGCCTCCTTCTTCTCCAATACCTGCCGATTCGGGGGCTGCGGACTCCACTTCCCCACCCTGGCCGACCTCATCGAGCACATCGAGGA
CAACCACATCGTTCACTCTGGCTACAGAATGCTTTCAGCTGGGCTACTCAACAGACGGCCACTGCAAGGGGCACCCGGACCCCACACTAC
CCCAGCCCCAGCGGCTGCAATGGGACCTTCCAGACCAGATCCACTCCTCCATCTCTCTAGCCCTGAGGGGAGCCAAGATCTTGTCTGAAA
ATGTCGACTGCCATGTCGTTCCATTCTCCCTATTTGGCAAGAGCTTCATCCGACGCTGCCACCTCTCTTCAGACAGCTTCATCCAGATCG
CCTTGCAACTGGCCCACTTCCGGGACAGGGGTCAATTCTGCCTGACTTATGAGTCGGCCATGACTCGCTTATTCCTGGAAGGCCGGACGG
AGACGGTGCGGTCTTGCACGAGGGAGGCCTGCAACTTTGTCAGGGCCATGGAGGACAAAGAGAAGACGGACCCACAGTGCCTCGCCCTGT
TCCGCGTGGCAGTGGACAAGCACCAGGCTCTGCTGAAGGCAGCCATGAGCGGGCAGGGAGTTGACCGCCACCTGTTTGCGCTGTACATCG
TGTCCCGATTCCTCCACCTGCAGTCGCCCTTCCTGACCCAGGTCCATTCGGAGCAGTGGCAGCTGTCCACCAGCCAGATCCCTGTTCAGC
AAATGCATCTGTTTGACGTCCACAATTACCCGGACTATGTTTCCTCAGGCGGTGGATTCGGGCCTGCTGATGACCATGGTTATGGTGTTT
CTTATATCTTCATGGGGGATGGCATGATCACCTTCCACATCTCCAGCAAAAAATCAAGCACAAAAACGGATTCCCACAGGCTGGGGCAGC
ACATTGAGGACGCACTGCTGGATGTGGCCTCCCTGTTCCAGGCGGGACAGCATTTTAAGCGCCGGTTCAGAGGGTCAGGGAAGGAGAACT
CCAGGCACAGGTGTGGATTTCTCTCCCGCCAGACTGGGGCCTCCAAGGCCTCAATGACATCCACCGACTTCTGACTCCTTCCAGCAGGCA

>In-frame_JAZF1_ENST00000283928_chr7_28220082_-_CPT1C_ENST00000354199_chr19_50211980_+_1044nt
ATCTCTCTCGCCCCCTCTCCCTCCGTCCCGTCCTCGCCGCTCCCCTCACCCCGCCTCTCTCCCCCTCCCCCAGCCCCTCCTCTCCTCACC
CCACCCGGCCTCCCTCCCTCCCTCGCCCGCCCGGCGCTCGCAGAGCCGACACCAGGGGGGCTCTCGATGTAGCACCATGACAGGCATCGC
CGCCGCCTCCTTCTTCTCCAATACCTGCCGATTCGGGGGCTGCGGACTCCACTTCCCCACCCTGGCCGACCTCATCGAGCACATCGAGGA
CAACCACATCGTTCACTCTGGCTACAGAATGCTTTCAGCTGGGCTACTCAACAGACGGCCACTGCAAGGGGCACCCGGACCCCACACTAC
CCCAGCCCCAGCGGCTGCAATGGGACCTTCCAGACCAGATCCACTCCTCCATCTCTCTAGCCCTGAGGGGAGCCAAGATCTTGTCTGAAA
ATGTCGACTGCCATGTCGTTCCATTCTCCCTATTTGGCAAGAGCTTCATCCGACGCTGCCACCTCTCTTCAGACAGCTTCATCCAGATCG
CCTTGCAACTGGCCCACTTCCGGGACAGGGGTCAATTCTGCCTGACTTATGAGTCGGCCATGACTCGCTTATTCCTGGAAGGCCGGACGG
AGACGGTGCGGTCTTGCACGAGGGAGGCCTGCAACTTTGTCAGGGCCATGGAGGACAAAGAGAAGACGGCTGATGACCATGGTTATGGTG
TTTCTTATATCTTCATGGGGGATGGCATGATCACCTTCCACATCTCCAGCAAAAAATCAAGCACAAAAACGGATTCCCACAGGCTGGGGC
AGCACATTGAGGACGCACTGCTGGATGTGGCCTCCCTGTTCCAGGCGGGACAGCATTTTAAGCGCCGGTTCAGAGGGTCAGGGAAGGAGA
ACTCCAGGCACAGGTGTGGATTTCTCTCCCGCCAGACTGGGGCCTCCAAGGCCTCAATGACATCCACCGACTTCTGACTCCTTCCAGCAG

>In-frame_JAZF1_ENST00000283928_chr7_28220082_-_CPT1C_ENST00000405931_chr19_50211980_+_1370nt
ATCTCTCTCGCCCCCTCTCCCTCCGTCCCGTCCTCGCCGCTCCCCTCACCCCGCCTCTCTCCCCCTCCCCCAGCCCCTCCTCTCCTCACC
CCACCCGGCCTCCCTCCCTCCCTCGCCCGCCCGGCGCTCGCAGAGCCGACACCAGGGGGGCTCTCGATGTAGCACCATGACAGGCATCGC
CGCCGCCTCCTTCTTCTCCAATACCTGCCGATTCGGGGGCTGCGGACTCCACTTCCCCACCCTGGCCGACCTCATCGAGCACATCGAGGA
CAACCACATCGTTCACTCTGGCTACAGAATGCTTTCAGCTGGGCTACTCAACAGACGGCCACTGCAAGGGGCACCCGGACCCCACACTAC
CCCAGCCCCAGCGGCTGCAATGGGACCTTCCAGACCAGATCCACTCCTCCATCTCTCTAGCCCTGAGGGGAGCCAAGATCTTGTCTGAAA
ATGTCGACTGCCATGTCGTTCCATTCTCCCTATTTGGCAAGAGCTTCATCCGACGCTGCCACCTCTCTTCAGACAGCTTCATCCAGATCG
CCTTGCAACTGGCCCACTTCCGGGACAGGGGTCAATTCTGCCTGACTTATGAGTCGGCCATGACTCGCTTATTCCTGGAAGGCCGGACGG
AGACGGTGCGGTCTTGCACGAGGGAGGCCTGCAACTTTGTCAGGGCCATGGAGGACAAAGAGAAGACGGACCCACAGTGCCTCGCCCTGT
TCCGCGTGGCAGTGGACAAGCACCAGGCTCTGCTGAAGGCAGCCATGAGCGGGCAGGGAGTTGACCGCCACCTGTTTGCGCTGTACATCG
TGTCCCGATTCCTCCACCTGCAGTCGCCCTTCCTGACCCAGGTCCATTCGGAGCAGTGGCAGCTGTCCACCAGCCAGATCCCTGTTCAGC
AAATGCATCTGTTTGACGTCCACAATTACCCGGACTATGTTTCCTCAGGCGGTGGATTCGGGCCTGCTGATGACCATGGTTATGGTGTTT
CTTATATCTTCATGGGGGATGGCATGATCACCTTCCACATCTCCAGCAAAAAATCAAGCACAAAAACGGATTCCCACAGGCTGGGGCAGC
ACATTGAGGACGCACTGCTGGATGTGGCCTCCCTGTTCCAGGCGGGACAGCATTTTAAGCGCCGGTTCAGAGGGTCAGGGAAGGAGAACT
CCAGGCACAGGTGTGGATTTCTCTCCCGCCAGACTGGGGCCTCCAAGGCCTCAATGACATCCACCGACTTCTGACTCCTTCCAGCAGGCA
GCTGGCCTCTCCAAGGAATAAGGGTGAAATTGCCACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCA


Top

FusionGenePPI for JAZF1_CPT1C


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page

.

check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors
JAZF1NR2C2, PPARG, RXRA, YEATS4, TRRAP, MEAF6, RUVBL1, MYCL, HIST1H2BA, MORF4L2CPT1C


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


Top

RelatedDrugs for JAZF1_CPT1C


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.0 2018-04-02)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

Top

RelatedDiseases for JAZF1_CPT1C


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource
HgeneJAZF1C0011860Diabetes Mellitus, Non-Insulin-Dependent1CTD_human
HgeneJAZF1C0014170Endometrial Neoplasms1CTD_human
HgeneJAZF1C0024141Lupus Erythematosus, Systemic1CTD_human
HgeneJAZF1C0033578Prostatic Neoplasms1CTD_human
TgeneCPT1CC0025202melanoma1CTD_human
TgeneCPT1CC0031117Peripheral Neuropathy1CTD_human
TgeneCPT1CC4225387SPASTIC PARAPLEGIA 73, AUTOSOMAL DOMINANT1ORPHANET;UNIPROT