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Fusion gene ID: 1782 |
FusionGeneSummary for ANKRD11_STARD10 |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: ANKRD11_STARD10 | Fusion gene ID: 1782 | Hgene | Tgene | Gene symbol | ANKRD11 | STARD10 | Gene ID | 29123 | 10809 |
| Gene name | ankyrin repeat domain 11 | StAR related lipid transfer domain containing 10 | |
| Synonyms | ANCO-1|ANCO1|LZ16|T13 | CGI-52|NY-CO-28|PCTP2|SDCCAG28 | |
| Cytomap | 16q24.3 | 11q13.4 | |
| Type of gene | protein-coding | protein-coding | |
| Description | ankyrin repeat domain-containing protein 11ankyrin repeat-containing cofactor 1nasopharyngeal carcinoma susceptibility proteintruncated ankyrin repeat domain 11 aberrant transcript 1truncated ankyrin repeat domain 11 aberrant transcript 2 | START domain-containing protein 10PCTP-LPCTP-like proteinSTART domain containing 10StAR-related lipid transfer (START) domain containing 10antigen NY-CO-28serologically defined colon cancer antigen 28stAR-related lipid transfer protein 10 | |
| Modification date | 20180523 | 20180523 | |
| UniProtAcc | Q6UB99 | Q9Y365 | |
| Ensembl transtripts involved in fusion gene | ENST00000378330, ENST00000301030, ENST00000563291, ENST00000567736, | ENST00000543304, ENST00000334805, ENST00000538536, ENST00000538437, ENST00000545082, | |
| Fusion gene scores | * DoF score | 29 X 15 X 15=6525 | 4 X 2 X 4=32 |
| # samples | 37 | 4 | |
| ** MAII score | log2(37/6525*10)=-4.1403807258283 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(4/32*10)=0.321928094887362 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
| Context | PubMed: ANKRD11 [Title/Abstract] AND STARD10 [Title/Abstract] AND fusion [Title/Abstract] | ||
| Functional or gene categories assigned by FusionGDB annotation | |||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| TCGA | RV | BLCA | TCGA-XF-A9SY-01A | ANKRD11 | chr16 | 89484692 | - | STARD10 | chr11 | 72492339 | - |
| * LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
| Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| 5UTR-5UTR | ENST00000378330 | ENST00000543304 | ANKRD11 | chr16 | 89484692 | - | STARD10 | chr11 | 72492339 | - |
| 5UTR-5UTR | ENST00000378330 | ENST00000334805 | ANKRD11 | chr16 | 89484692 | - | STARD10 | chr11 | 72492339 | - |
| 5UTR-5UTR | ENST00000378330 | ENST00000538536 | ANKRD11 | chr16 | 89484692 | - | STARD10 | chr11 | 72492339 | - |
| 5UTR-intron | ENST00000378330 | ENST00000538437 | ANKRD11 | chr16 | 89484692 | - | STARD10 | chr11 | 72492339 | - |
| 5UTR-5UTR | ENST00000378330 | ENST00000545082 | ANKRD11 | chr16 | 89484692 | - | STARD10 | chr11 | 72492339 | - |
| 5UTR-5UTR | ENST00000301030 | ENST00000543304 | ANKRD11 | chr16 | 89484692 | - | STARD10 | chr11 | 72492339 | - |
| 5UTR-5UTR | ENST00000301030 | ENST00000334805 | ANKRD11 | chr16 | 89484692 | - | STARD10 | chr11 | 72492339 | - |
| 5UTR-5UTR | ENST00000301030 | ENST00000538536 | ANKRD11 | chr16 | 89484692 | - | STARD10 | chr11 | 72492339 | - |
| 5UTR-intron | ENST00000301030 | ENST00000538437 | ANKRD11 | chr16 | 89484692 | - | STARD10 | chr11 | 72492339 | - |
| 5UTR-5UTR | ENST00000301030 | ENST00000545082 | ANKRD11 | chr16 | 89484692 | - | STARD10 | chr11 | 72492339 | - |
| intron-5UTR | ENST00000563291 | ENST00000543304 | ANKRD11 | chr16 | 89484692 | - | STARD10 | chr11 | 72492339 | - |
| intron-5UTR | ENST00000563291 | ENST00000334805 | ANKRD11 | chr16 | 89484692 | - | STARD10 | chr11 | 72492339 | - |
| intron-5UTR | ENST00000563291 | ENST00000538536 | ANKRD11 | chr16 | 89484692 | - | STARD10 | chr11 | 72492339 | - |
| intron-intron | ENST00000563291 | ENST00000538437 | ANKRD11 | chr16 | 89484692 | - | STARD10 | chr11 | 72492339 | - |
| intron-5UTR | ENST00000563291 | ENST00000545082 | ANKRD11 | chr16 | 89484692 | - | STARD10 | chr11 | 72492339 | - |
| intron-5UTR | ENST00000567736 | ENST00000543304 | ANKRD11 | chr16 | 89484692 | - | STARD10 | chr11 | 72492339 | - |
| intron-5UTR | ENST00000567736 | ENST00000334805 | ANKRD11 | chr16 | 89484692 | - | STARD10 | chr11 | 72492339 | - |
| intron-5UTR | ENST00000567736 | ENST00000538536 | ANKRD11 | chr16 | 89484692 | - | STARD10 | chr11 | 72492339 | - |
| intron-intron | ENST00000567736 | ENST00000538437 | ANKRD11 | chr16 | 89484692 | - | STARD10 | chr11 | 72492339 | - |
| intron-5UTR | ENST00000567736 | ENST00000545082 | ANKRD11 | chr16 | 89484692 | - | STARD10 | chr11 | 72492339 | - |
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FusionProtFeatures for ANKRD11_STARD10 |
| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| ANKRD11 | STARD10 |
| Chromatin regulator which modulates histone acetylationand gene expression in neural precursor cells (By similarity). Mayrecruit histone deacetylases (HDACs) to the p160coactivators/nuclear receptor complex to inhibit ligand-dependenttransactivation (PubMed:15184363). Has a role in proliferation anddevelopment of cortical neural precursors (PubMed:25556659). Mayalso regulate bone homeostasis (By similarity).{ECO:0000250|UniProtKB:E9Q4F7, ECO:0000269|PubMed:15184363,ECO:0000269|PubMed:25556659}. | May play metabolic roles in sperm maturation orfertilization (By similarity). Phospholipid transfer protein thatpreferentially selects lipid species containing a palmitoyl orstearoyl chain on the sn-1 and an unsaturated fatty acyl chain(18:1 or 18:2) on the sn-2 position. Able to transferphosphatidylcholine (PC) and phosphatidyetanolamline (PE) betweenmembranes. {ECO:0000250, ECO:0000269|PubMed:15911624}. |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
| - In-frame and retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| - In-frame and not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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FusionGeneSequence for ANKRD11_STARD10 |
| For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
| * Fusion amino acid sequences. |
| * Fusion transcript sequences (only coding sequence (CDS) region). |
| * Fusion transcript sequences (Full-length transcript). |
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FusionGenePPI for ANKRD11_STARD10 |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
| Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
| Hgene | Hgene's interactors | Tgene | Tgene's interactors |
| ANKRD11 | NCOA3, NCOA2, HDAC3, BZRAP1, CDCA7L, GOLGA2, HOOK2, IKZF1, CEP44, LZTS2, MKRN3, PDE4DIP, TFIP11, TRAF2, TRIM37, GPS2, NCOA1, ARRB2, SYNCRIP, RACGAP1, PTAR1, TRIM25 | STARD10 | APP, GRB2, PRMT6, TP53 |
| - Retained PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| - Lost PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
| - Retained PPIs, but lost function due to frame-shift fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for ANKRD11_STARD10 |
| Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
| Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for ANKRD11_STARD10 |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
| Hgene | ANKRD11 | C0005944 | Metabolic Bone Disorder | 1 | CTD_human |
| Hgene | ANKRD11 | C1510586 | Autism Spectrum Disorders | 1 | CTD_human |
| Tgene | STARD10 | C0033578 | Prostatic Neoplasms | 1 | CTD_human |
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