FusionGDB Logo

Home

Download

Statistics

Examples

Help

Contact

Center for Computational Systems Medicine
leaf

FusionGeneSummary

leaf

FusionProtFeature

leaf

FusionGeneSequence

leaf

FusionGenePPI

leaf

RelatedDrugs

leaf

RelatedDiseases

Fusion gene ID: 1768

FusionGeneSummary for ANKRD11_FANCA

check button Fusion gene summary
Fusion gene informationFusion gene name: ANKRD11_FANCA
Fusion gene ID: 1768
HgeneTgene
Gene symbol

ANKRD11

FANCA

Gene ID

29123

2175

Gene nameankyrin repeat domain 11FA complementation group A
SynonymsANCO-1|ANCO1|LZ16|T13FA|FA-H|FA1|FAA|FACA|FAH|FANCH
Cytomap

16q24.3

16q24.3

Type of geneprotein-codingprotein-coding
Descriptionankyrin repeat domain-containing protein 11ankyrin repeat-containing cofactor 1nasopharyngeal carcinoma susceptibility proteintruncated ankyrin repeat domain 11 aberrant transcript 1truncated ankyrin repeat domain 11 aberrant transcript 2Fanconi anemia group A proteinFanconi anemia complementation group AFanconi anemia, complementation group HFanconi anemia, type 1
Modification date2018052320180522
UniProtAcc

Q6UB99

O15360

Ensembl transtripts involved in fusion geneENST00000378330, ENST00000301030, 
ENST00000563291, ENST00000567736, 
ENST00000389301, ENST00000568369, 
ENST00000567284, ENST00000389302, 
ENST00000563673, ENST00000534992, 
ENST00000543736, 
Fusion gene scores* DoF score29 X 15 X 15=65256 X 9 X 5=270
# samples 3710
** MAII scorelog2(37/6525*10)=-4.1403807258283
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
log2(10/270*10)=-1.43295940727611
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: ANKRD11 [Title/Abstract] AND FANCA [Title/Abstract] AND fusion [Title/Abstract]

Functional or gene categories assigned by FusionGDB annotation
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID

check button Fusion gene information from three resources
(ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018))
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
Data typeSourceCancer typeSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
TCGARVESCATCGA-L5-A8NI-01AANKRD11chr16

89556653

-FANCAchr16

89818630

-
TCGARVLUADTCGA-97-8176-01AANKRD11chr16

89484692

-FANCAchr16

89818630

-
TCGARVSTADTCGA-BR-8485-01AANKRD11chr16

89556653

-FANCAchr16

89849510

-
TCGARVSTADTCGA-BR-A4QI-01AANKRD11chr16

89484692

-FANCAchr16

89838222

-
* LD: Li Ding group's fusion gene list
  RV: Roel Verhaak group's fusion gene list
  ChiTaRs fusion database

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
5UTR-3CDSENST00000378330ENST00000389301ANKRD11chr16

89556653

-FANCAchr16

89818630

-
5UTR-3CDSENST00000378330ENST00000568369ANKRD11chr16

89556653

-FANCAchr16

89818630

-
5UTR-intronENST00000378330ENST00000567284ANKRD11chr16

89556653

-FANCAchr16

89818630

-
5UTR-intronENST00000378330ENST00000389302ANKRD11chr16

89556653

-FANCAchr16

89818630

-
5UTR-intronENST00000378330ENST00000563673ANKRD11chr16

89556653

-FANCAchr16

89818630

-
5UTR-intronENST00000378330ENST00000534992ANKRD11chr16

89556653

-FANCAchr16

89818630

-
5UTR-intronENST00000378330ENST00000543736ANKRD11chr16

89556653

-FANCAchr16

89818630

-
5UTR-3CDSENST00000301030ENST00000389301ANKRD11chr16

89556653

-FANCAchr16

89818630

-
5UTR-3CDSENST00000301030ENST00000568369ANKRD11chr16

89556653

-FANCAchr16

89818630

-
5UTR-intronENST00000301030ENST00000567284ANKRD11chr16

89556653

-FANCAchr16

89818630

-
5UTR-intronENST00000301030ENST00000389302ANKRD11chr16

89556653

-FANCAchr16

89818630

-
5UTR-intronENST00000301030ENST00000563673ANKRD11chr16

89556653

-FANCAchr16

89818630

-
5UTR-intronENST00000301030ENST00000534992ANKRD11chr16

89556653

-FANCAchr16

89818630

-
5UTR-intronENST00000301030ENST00000543736ANKRD11chr16

89556653

-FANCAchr16

89818630

-
intron-3CDSENST00000563291ENST00000389301ANKRD11chr16

89556653

-FANCAchr16

89818630

-
intron-3CDSENST00000563291ENST00000568369ANKRD11chr16

89556653

-FANCAchr16

89818630

-
intron-intronENST00000563291ENST00000567284ANKRD11chr16

89556653

-FANCAchr16

89818630

-
intron-intronENST00000563291ENST00000389302ANKRD11chr16

89556653

-FANCAchr16

89818630

-
intron-intronENST00000563291ENST00000563673ANKRD11chr16

89556653

-FANCAchr16

89818630

-
intron-intronENST00000563291ENST00000534992ANKRD11chr16

89556653

-FANCAchr16

89818630

-
intron-intronENST00000563291ENST00000543736ANKRD11chr16

89556653

-FANCAchr16

89818630

-
intron-3CDSENST00000567736ENST00000389301ANKRD11chr16

89556653

-FANCAchr16

89818630

-
intron-3CDSENST00000567736ENST00000568369ANKRD11chr16

89556653

-FANCAchr16

89818630

-
intron-intronENST00000567736ENST00000567284ANKRD11chr16

89556653

-FANCAchr16

89818630

-
intron-intronENST00000567736ENST00000389302ANKRD11chr16

89556653

-FANCAchr16

89818630

-
intron-intronENST00000567736ENST00000563673ANKRD11chr16

89556653

-FANCAchr16

89818630

-
intron-intronENST00000567736ENST00000534992ANKRD11chr16

89556653

-FANCAchr16

89818630

-
intron-intronENST00000567736ENST00000543736ANKRD11chr16

89556653

-FANCAchr16

89818630

-
5UTR-3CDSENST00000378330ENST00000389301ANKRD11chr16

89484692

-FANCAchr16

89818630

-
5UTR-3CDSENST00000378330ENST00000568369ANKRD11chr16

89484692

-FANCAchr16

89818630

-
5UTR-intronENST00000378330ENST00000567284ANKRD11chr16

89484692

-FANCAchr16

89818630

-
5UTR-intronENST00000378330ENST00000389302ANKRD11chr16

89484692

-FANCAchr16

89818630

-
5UTR-intronENST00000378330ENST00000563673ANKRD11chr16

89484692

-FANCAchr16

89818630

-
5UTR-intronENST00000378330ENST00000534992ANKRD11chr16

89484692

-FANCAchr16

89818630

-
5UTR-intronENST00000378330ENST00000543736ANKRD11chr16

89484692

-FANCAchr16

89818630

-
5UTR-3CDSENST00000301030ENST00000389301ANKRD11chr16

89484692

-FANCAchr16

89818630

-
5UTR-3CDSENST00000301030ENST00000568369ANKRD11chr16

89484692

-FANCAchr16

89818630

-
5UTR-intronENST00000301030ENST00000567284ANKRD11chr16

89484692

-FANCAchr16

89818630

-
5UTR-intronENST00000301030ENST00000389302ANKRD11chr16

89484692

-FANCAchr16

89818630

-
5UTR-intronENST00000301030ENST00000563673ANKRD11chr16

89484692

-FANCAchr16

89818630

-
5UTR-intronENST00000301030ENST00000534992ANKRD11chr16

89484692

-FANCAchr16

89818630

-
5UTR-intronENST00000301030ENST00000543736ANKRD11chr16

89484692

-FANCAchr16

89818630

-
intron-3CDSENST00000563291ENST00000389301ANKRD11chr16

89484692

-FANCAchr16

89818630

-
intron-3CDSENST00000563291ENST00000568369ANKRD11chr16

89484692

-FANCAchr16

89818630

-
intron-intronENST00000563291ENST00000567284ANKRD11chr16

89484692

-FANCAchr16

89818630

-
intron-intronENST00000563291ENST00000389302ANKRD11chr16

89484692

-FANCAchr16

89818630

-
intron-intronENST00000563291ENST00000563673ANKRD11chr16

89484692

-FANCAchr16

89818630

-
intron-intronENST00000563291ENST00000534992ANKRD11chr16

89484692

-FANCAchr16

89818630

-
intron-intronENST00000563291ENST00000543736ANKRD11chr16

89484692

-FANCAchr16

89818630

-
intron-3CDSENST00000567736ENST00000389301ANKRD11chr16

89484692

-FANCAchr16

89818630

-
intron-3CDSENST00000567736ENST00000568369ANKRD11chr16

89484692

-FANCAchr16

89818630

-
intron-intronENST00000567736ENST00000567284ANKRD11chr16

89484692

-FANCAchr16

89818630

-
intron-intronENST00000567736ENST00000389302ANKRD11chr16

89484692

-FANCAchr16

89818630

-
intron-intronENST00000567736ENST00000563673ANKRD11chr16

89484692

-FANCAchr16

89818630

-
intron-intronENST00000567736ENST00000534992ANKRD11chr16

89484692

-FANCAchr16

89818630

-
intron-intronENST00000567736ENST00000543736ANKRD11chr16

89484692

-FANCAchr16

89818630

-
5UTR-3CDSENST00000378330ENST00000389301ANKRD11chr16

89556653

-FANCAchr16

89849510

-
5UTR-3CDSENST00000378330ENST00000568369ANKRD11chr16

89556653

-FANCAchr16

89849510

-
5UTR-intronENST00000378330ENST00000567284ANKRD11chr16

89556653

-FANCAchr16

89849510

-
5UTR-intronENST00000378330ENST00000389302ANKRD11chr16

89556653

-FANCAchr16

89849510

-
5UTR-intronENST00000378330ENST00000563673ANKRD11chr16

89556653

-FANCAchr16

89849510

-
5UTR-intronENST00000378330ENST00000534992ANKRD11chr16

89556653

-FANCAchr16

89849510

-
5UTR-intronENST00000378330ENST00000543736ANKRD11chr16

89556653

-FANCAchr16

89849510

-
5UTR-3CDSENST00000301030ENST00000389301ANKRD11chr16

89556653

-FANCAchr16

89849510

-
5UTR-3CDSENST00000301030ENST00000568369ANKRD11chr16

89556653

-FANCAchr16

89849510

-
5UTR-intronENST00000301030ENST00000567284ANKRD11chr16

89556653

-FANCAchr16

89849510

-
5UTR-intronENST00000301030ENST00000389302ANKRD11chr16

89556653

-FANCAchr16

89849510

-
5UTR-intronENST00000301030ENST00000563673ANKRD11chr16

89556653

-FANCAchr16

89849510

-
5UTR-intronENST00000301030ENST00000534992ANKRD11chr16

89556653

-FANCAchr16

89849510

-
5UTR-intronENST00000301030ENST00000543736ANKRD11chr16

89556653

-FANCAchr16

89849510

-
intron-3CDSENST00000563291ENST00000389301ANKRD11chr16

89556653

-FANCAchr16

89849510

-
intron-3CDSENST00000563291ENST00000568369ANKRD11chr16

89556653

-FANCAchr16

89849510

-
intron-intronENST00000563291ENST00000567284ANKRD11chr16

89556653

-FANCAchr16

89849510

-
intron-intronENST00000563291ENST00000389302ANKRD11chr16

89556653

-FANCAchr16

89849510

-
intron-intronENST00000563291ENST00000563673ANKRD11chr16

89556653

-FANCAchr16

89849510

-
intron-intronENST00000563291ENST00000534992ANKRD11chr16

89556653

-FANCAchr16

89849510

-
intron-intronENST00000563291ENST00000543736ANKRD11chr16

89556653

-FANCAchr16

89849510

-
intron-3CDSENST00000567736ENST00000389301ANKRD11chr16

89556653

-FANCAchr16

89849510

-
intron-3CDSENST00000567736ENST00000568369ANKRD11chr16

89556653

-FANCAchr16

89849510

-
intron-intronENST00000567736ENST00000567284ANKRD11chr16

89556653

-FANCAchr16

89849510

-
intron-intronENST00000567736ENST00000389302ANKRD11chr16

89556653

-FANCAchr16

89849510

-
intron-intronENST00000567736ENST00000563673ANKRD11chr16

89556653

-FANCAchr16

89849510

-
intron-intronENST00000567736ENST00000534992ANKRD11chr16

89556653

-FANCAchr16

89849510

-
intron-intronENST00000567736ENST00000543736ANKRD11chr16

89556653

-FANCAchr16

89849510

-
5UTR-3CDSENST00000378330ENST00000389301ANKRD11chr16

89484692

-FANCAchr16

89838222

-
5UTR-3CDSENST00000378330ENST00000568369ANKRD11chr16

89484692

-FANCAchr16

89838222

-
5UTR-5UTRENST00000378330ENST00000567284ANKRD11chr16

89484692

-FANCAchr16

89838222

-
5UTR-intronENST00000378330ENST00000389302ANKRD11chr16

89484692

-FANCAchr16

89838222

-
5UTR-intronENST00000378330ENST00000563673ANKRD11chr16

89484692

-FANCAchr16

89838222

-
5UTR-intronENST00000378330ENST00000534992ANKRD11chr16

89484692

-FANCAchr16

89838222

-
5UTR-intronENST00000378330ENST00000543736ANKRD11chr16

89484692

-FANCAchr16

89838222

-
5UTR-3CDSENST00000301030ENST00000389301ANKRD11chr16

89484692

-FANCAchr16

89838222

-
5UTR-3CDSENST00000301030ENST00000568369ANKRD11chr16

89484692

-FANCAchr16

89838222

-
5UTR-5UTRENST00000301030ENST00000567284ANKRD11chr16

89484692

-FANCAchr16

89838222

-
5UTR-intronENST00000301030ENST00000389302ANKRD11chr16

89484692

-FANCAchr16

89838222

-
5UTR-intronENST00000301030ENST00000563673ANKRD11chr16

89484692

-FANCAchr16

89838222

-
5UTR-intronENST00000301030ENST00000534992ANKRD11chr16

89484692

-FANCAchr16

89838222

-
5UTR-intronENST00000301030ENST00000543736ANKRD11chr16

89484692

-FANCAchr16

89838222

-
intron-3CDSENST00000563291ENST00000389301ANKRD11chr16

89484692

-FANCAchr16

89838222

-
intron-3CDSENST00000563291ENST00000568369ANKRD11chr16

89484692

-FANCAchr16

89838222

-
intron-5UTRENST00000563291ENST00000567284ANKRD11chr16

89484692

-FANCAchr16

89838222

-
intron-intronENST00000563291ENST00000389302ANKRD11chr16

89484692

-FANCAchr16

89838222

-
intron-intronENST00000563291ENST00000563673ANKRD11chr16

89484692

-FANCAchr16

89838222

-
intron-intronENST00000563291ENST00000534992ANKRD11chr16

89484692

-FANCAchr16

89838222

-
intron-intronENST00000563291ENST00000543736ANKRD11chr16

89484692

-FANCAchr16

89838222

-
intron-3CDSENST00000567736ENST00000389301ANKRD11chr16

89484692

-FANCAchr16

89838222

-
intron-3CDSENST00000567736ENST00000568369ANKRD11chr16

89484692

-FANCAchr16

89838222

-
intron-5UTRENST00000567736ENST00000567284ANKRD11chr16

89484692

-FANCAchr16

89838222

-
intron-intronENST00000567736ENST00000389302ANKRD11chr16

89484692

-FANCAchr16

89838222

-
intron-intronENST00000567736ENST00000563673ANKRD11chr16

89484692

-FANCAchr16

89838222

-
intron-intronENST00000567736ENST00000534992ANKRD11chr16

89484692

-FANCAchr16

89838222

-
intron-intronENST00000567736ENST00000543736ANKRD11chr16

89484692

-FANCAchr16

89838222

-

Top

FusionProtFeatures for ANKRD11_FANCA


check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
ANKRD11

Q6UB99

FANCA

O15360

Chromatin regulator which modulates histone acetylationand gene expression in neural precursor cells (By similarity). Mayrecruit histone deacetylases (HDACs) to the p160coactivators/nuclear receptor complex to inhibit ligand-dependenttransactivation (PubMed:15184363). Has a role in proliferation anddevelopment of cortical neural precursors (PubMed:25556659). Mayalso regulate bone homeostasis (By similarity).{ECO:0000250|UniProtKB:E9Q4F7, ECO:0000269|PubMed:15184363,ECO:0000269|PubMed:25556659}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page

.

* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note


Top

FusionGeneSequence for ANKRD11_FANCA


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences.
(nt: nucleotides, aa: amino acids)

* Fusion amino acid sequences.

* Fusion transcript sequences (only coding sequence (CDS) region).

* Fusion transcript sequences (Full-length transcript).

Top

FusionGenePPI for ANKRD11_FANCA


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page

.

check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors
ANKRD11NCOA3, NCOA2, HDAC3, BZRAP1, CDCA7L, GOLGA2, HOOK2, IKZF1, CEP44, LZTS2, MKRN3, PDE4DIP, TFIP11, TRAF2, TRIM37, GPS2, NCOA1, ARRB2, SYNCRIP, RACGAP1, PTAR1, TRIM25FANCASMARCA4, FANCG, FANCF, FANCC, AKT1, ALDOA, SPTAN1, ENO1, AZIN1, ATP5B, DDX39B, RMI1, BLM, TCERG1, CDK1, DAXX, LIPG, FANCA, SPTA1, ERCC4, FANCE, GNB2, HSP90B1, HPRT1, DNAJB1, HSP90AA1, CHUK, KRT1, CD79A, MKNK1, MX1, NUB1, NAMPT, FANCL, DUS4L, PRPF31, PSMA5, IFIT3, RPA1, RPL18, SGK1, TAF10, TCP1, CCT3, TOP3A, TPT1, ZNF24, BRCA1, IKBKB, SNX5, FANCM, C17orf70, FANCB, C19orf40, ATR, PCNA, NPM1, CAPN1, APITD1, STRA13, POLN, CENPE, HES1, MSH2, C1orf86, CTNNB1, RMI2, BSG, P2RY8, KRAS, RNF4, OPRM1, C6orf118, NPY2R, CHRM4, APLNR, IARS2, NOTCH1, RBPJ, CTBP1, FANCD2, AURKA, NEK2, TUBG1, HSP90AB1, HSPA8, BRCC3, BRAT1, CHTF18, DDIT3, DDX11, HUS1, MCM5, MCM7, MEN1, MGMT, MMS19, MSH5, PER3, PIAS4, RAD51, RAD51D, REC8, SIRT4, SIRT6, SMARCD2, SMCR8, TDG, TRAF6, XRCC3, PRKAA1


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


Top

RelatedDrugs for ANKRD11_FANCA


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.0 2018-04-02)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

Top

RelatedDiseases for ANKRD11_FANCA


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource
HgeneANKRD11C0005944Metabolic Bone Disorder1CTD_human
HgeneANKRD11C1510586Autism Spectrum Disorders1CTD_human
TgeneFANCAC3469521FANCONI ANEMIA, COMPLEMENTATION GROUP A (disorder)10UNIPROT
TgeneFANCAC0005695Bladder Neoplasm1CTD_human
TgeneFANCAC0010606Adenoid Cystic Carcinoma1CTD_human
TgeneFANCAC0036095Salivary Gland Neoplasms1CTD_human