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Center for Computational Systems Medicine
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FusionGeneSummary

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FusionProtFeature

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FusionGeneSequence

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FusionGenePPI

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Fusion gene ID: 16552

FusionGeneSummary for HNRNPC_HNRNPC

check button Fusion gene summary
Fusion gene informationFusion gene name: HNRNPC_HNRNPC
Fusion gene ID: 16552
HgeneTgene
Gene symbol

HNRNPC

HNRNPC

Gene ID

3183

3183

Gene nameheterogeneous nuclear ribonucleoprotein C (C1/C2)heterogeneous nuclear ribonucleoprotein C (C1/C2)
SynonymsC1|C2|HNRNP|HNRPC|SNRPCC1|C2|HNRNP|HNRPC|SNRPC
Cytomap

14q11.2

14q11.2

Type of geneprotein-codingprotein-coding
Descriptionheterogeneous nuclear ribonucleoproteins C1/C2hnRNP C1/C2nuclear ribonucleoprotein particle C1 proteinnuclear ribonucleoprotein particle C2 proteinheterogeneous nuclear ribonucleoproteins C1/C2hnRNP C1/C2nuclear ribonucleoprotein particle C1 proteinnuclear ribonucleoprotein particle C2 protein
Modification date2018052320180523
UniProtAcc

P07910

P07910

Ensembl transtripts involved in fusion geneENST00000449098, ENST00000320084, 
ENST00000336053, ENST00000554969, 
ENST00000556142, ENST00000554455, 
ENST00000430246, ENST00000553753, 
ENST00000555914, ENST00000555309, 
ENST00000556628, ENST00000555883, 
ENST00000556513, ENST00000557201, 
ENST00000553300, ENST00000556897, 
ENST00000420743, 
ENST00000449098, 
ENST00000320084, ENST00000336053, 
ENST00000554969, ENST00000556142, 
ENST00000554455, ENST00000430246, 
ENST00000553753, ENST00000555914, 
ENST00000555309, ENST00000556628, 
ENST00000555883, ENST00000556513, 
ENST00000557201, ENST00000553300, 
ENST00000556897, ENST00000420743, 
Fusion gene scores* DoF score7 X 6 X 6=2526 X 6 X 2=72
# samples 86
** MAII scorelog2(8/252*10)=-1.65535182861255
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
log2(6/72*10)=-0.263034405833794
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: HNRNPC [Title/Abstract] AND HNRNPC [Title/Abstract] AND fusion [Title/Abstract]

Functional or gene categories assigned by FusionGDB annotation
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID

check button Fusion gene information from three resources
(ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018))
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
Data typeSourceCancer typeSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChiTaRS3.1AA807200HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
* LD: Li Ding group's fusion gene list
  RV: Roel Verhaak group's fusion gene list
  ChiTaRs fusion database

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
intron-intronENST00000449098ENST00000449098HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000449098ENST00000320084HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000449098ENST00000336053HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000449098ENST00000554969HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000449098ENST00000556142HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000449098ENST00000554455HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000449098ENST00000430246HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000449098ENST00000553753HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000449098ENST00000555914HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000449098ENST00000555309HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000449098ENST00000556628HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000449098ENST00000555883HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000449098ENST00000556513HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000449098ENST00000557201HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000449098ENST00000553300HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000449098ENST00000556897HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000449098ENST00000420743HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000320084ENST00000449098HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000320084ENST00000320084HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000320084ENST00000336053HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000320084ENST00000554969HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000320084ENST00000556142HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000320084ENST00000554455HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000320084ENST00000430246HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000320084ENST00000553753HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000320084ENST00000555914HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000320084ENST00000555309HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000320084ENST00000556628HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000320084ENST00000555883HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000320084ENST00000556513HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000320084ENST00000557201HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000320084ENST00000553300HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000320084ENST00000556897HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000320084ENST00000420743HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000336053ENST00000449098HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000336053ENST00000320084HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000336053ENST00000336053HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000336053ENST00000554969HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000336053ENST00000556142HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000336053ENST00000554455HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000336053ENST00000430246HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000336053ENST00000553753HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000336053ENST00000555914HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000336053ENST00000555309HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000336053ENST00000556628HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000336053ENST00000555883HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000336053ENST00000556513HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000336053ENST00000557201HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000336053ENST00000553300HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000336053ENST00000556897HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000336053ENST00000420743HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000554969ENST00000449098HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000554969ENST00000320084HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000554969ENST00000336053HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000554969ENST00000554969HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000554969ENST00000556142HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000554969ENST00000554455HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000554969ENST00000430246HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000554969ENST00000553753HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000554969ENST00000555914HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000554969ENST00000555309HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000554969ENST00000556628HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000554969ENST00000555883HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000554969ENST00000556513HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000554969ENST00000557201HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000554969ENST00000553300HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000554969ENST00000556897HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000554969ENST00000420743HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000556142ENST00000449098HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000556142ENST00000320084HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000556142ENST00000336053HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000556142ENST00000554969HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000556142ENST00000556142HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000556142ENST00000554455HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000556142ENST00000430246HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000556142ENST00000553753HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000556142ENST00000555914HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000556142ENST00000555309HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000556142ENST00000556628HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000556142ENST00000555883HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000556142ENST00000556513HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000556142ENST00000557201HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000556142ENST00000553300HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000556142ENST00000556897HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000556142ENST00000420743HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000554455ENST00000449098HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000554455ENST00000320084HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000554455ENST00000336053HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000554455ENST00000554969HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000554455ENST00000556142HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000554455ENST00000554455HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000554455ENST00000430246HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000554455ENST00000553753HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000554455ENST00000555914HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000554455ENST00000555309HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000554455ENST00000556628HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000554455ENST00000555883HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000554455ENST00000556513HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000554455ENST00000557201HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000554455ENST00000553300HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000554455ENST00000556897HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000554455ENST00000420743HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000430246ENST00000449098HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000430246ENST00000320084HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000430246ENST00000336053HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000430246ENST00000554969HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000430246ENST00000556142HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000430246ENST00000554455HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000430246ENST00000430246HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000430246ENST00000553753HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000430246ENST00000555914HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000430246ENST00000555309HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000430246ENST00000556628HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000430246ENST00000555883HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000430246ENST00000556513HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000430246ENST00000557201HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000430246ENST00000553300HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000430246ENST00000556897HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000430246ENST00000420743HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000553753ENST00000449098HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000553753ENST00000320084HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000553753ENST00000336053HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000553753ENST00000554969HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000553753ENST00000556142HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000553753ENST00000554455HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000553753ENST00000430246HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000553753ENST00000553753HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000553753ENST00000555914HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000553753ENST00000555309HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000553753ENST00000556628HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000553753ENST00000555883HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000553753ENST00000556513HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000553753ENST00000557201HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000553753ENST00000553300HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000553753ENST00000556897HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000553753ENST00000420743HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000555914ENST00000449098HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000555914ENST00000320084HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000555914ENST00000336053HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000555914ENST00000554969HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000555914ENST00000556142HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000555914ENST00000554455HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000555914ENST00000430246HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000555914ENST00000553753HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000555914ENST00000555914HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000555914ENST00000555309HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000555914ENST00000556628HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000555914ENST00000555883HNRNPCchr14

21707036

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21706233

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intron-intronENST00000555914ENST00000556513HNRNPCchr14

21707036

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21706233

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intron-intronENST00000555914ENST00000557201HNRNPCchr14

21707036

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21706233

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intron-intronENST00000555914ENST00000553300HNRNPCchr14

21707036

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21706233

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intron-intronENST00000555914ENST00000556897HNRNPCchr14

21707036

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21706233

+
intron-intronENST00000555914ENST00000420743HNRNPCchr14

21707036

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21706233

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intron-intronENST00000555309ENST00000449098HNRNPCchr14

21707036

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21706233

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intron-intronENST00000555309ENST00000320084HNRNPCchr14

21707036

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21706233

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intron-intronENST00000555309ENST00000336053HNRNPCchr14

21707036

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21706233

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intron-intronENST00000555309ENST00000554969HNRNPCchr14

21707036

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21706233

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intron-intronENST00000555309ENST00000556142HNRNPCchr14

21707036

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21706233

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intron-intronENST00000555309ENST00000554455HNRNPCchr14

21707036

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21706233

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intron-intronENST00000555309ENST00000430246HNRNPCchr14

21707036

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21706233

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intron-intronENST00000555309ENST00000553753HNRNPCchr14

21707036

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21706233

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intron-intronENST00000555309ENST00000555914HNRNPCchr14

21707036

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21706233

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intron-intronENST00000555309ENST00000555309HNRNPCchr14

21707036

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21706233

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intron-intronENST00000555309ENST00000556628HNRNPCchr14

21707036

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21706233

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intron-intronENST00000555309ENST00000555883HNRNPCchr14

21707036

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21706233

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intron-intronENST00000555309ENST00000556513HNRNPCchr14

21707036

+HNRNPCchr14

21706233

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intron-intronENST00000555309ENST00000557201HNRNPCchr14

21707036

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21706233

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intron-intronENST00000555309ENST00000553300HNRNPCchr14

21707036

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21706233

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intron-intronENST00000555309ENST00000556897HNRNPCchr14

21707036

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21706233

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intron-intronENST00000555309ENST00000420743HNRNPCchr14

21707036

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21706233

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intron-intronENST00000556628ENST00000449098HNRNPCchr14

21707036

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21706233

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intron-intronENST00000556628ENST00000320084HNRNPCchr14

21707036

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21706233

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intron-intronENST00000556628ENST00000336053HNRNPCchr14

21707036

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21706233

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intron-intronENST00000556628ENST00000554969HNRNPCchr14

21707036

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21706233

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intron-intronENST00000556628ENST00000556142HNRNPCchr14

21707036

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21706233

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intron-intronENST00000556628ENST00000554455HNRNPCchr14

21707036

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21706233

+
intron-intronENST00000556628ENST00000430246HNRNPCchr14

21707036

+HNRNPCchr14

21706233

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intron-intronENST00000556628ENST00000553753HNRNPCchr14

21707036

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21706233

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intron-intronENST00000556628ENST00000555914HNRNPCchr14

21707036

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21706233

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intron-intronENST00000556628ENST00000555309HNRNPCchr14

21707036

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21706233

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intron-intronENST00000556628ENST00000556628HNRNPCchr14

21707036

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21706233

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intron-intronENST00000556628ENST00000555883HNRNPCchr14

21707036

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21706233

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intron-intronENST00000556628ENST00000556513HNRNPCchr14

21707036

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21706233

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intron-intronENST00000556628ENST00000557201HNRNPCchr14

21707036

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21706233

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intron-intronENST00000556628ENST00000553300HNRNPCchr14

21707036

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21706233

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intron-intronENST00000556628ENST00000556897HNRNPCchr14

21707036

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21706233

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intron-intronENST00000556628ENST00000420743HNRNPCchr14

21707036

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21706233

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intron-intronENST00000555883ENST00000449098HNRNPCchr14

21707036

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21706233

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intron-intronENST00000555883ENST00000320084HNRNPCchr14

21707036

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21706233

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intron-intronENST00000555883ENST00000336053HNRNPCchr14

21707036

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21706233

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intron-intronENST00000555883ENST00000554969HNRNPCchr14

21707036

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21706233

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intron-intronENST00000555883ENST00000556142HNRNPCchr14

21707036

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21706233

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intron-intronENST00000555883ENST00000554455HNRNPCchr14

21707036

+HNRNPCchr14

21706233

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intron-intronENST00000555883ENST00000430246HNRNPCchr14

21707036

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21706233

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intron-intronENST00000555883ENST00000553753HNRNPCchr14

21707036

+HNRNPCchr14

21706233

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intron-intronENST00000555883ENST00000555914HNRNPCchr14

21707036

+HNRNPCchr14

21706233

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intron-intronENST00000555883ENST00000555309HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000555883ENST00000556628HNRNPCchr14

21707036

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21706233

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intron-intronENST00000555883ENST00000555883HNRNPCchr14

21707036

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21706233

+
intron-intronENST00000555883ENST00000556513HNRNPCchr14

21707036

+HNRNPCchr14

21706233

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intron-intronENST00000555883ENST00000557201HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000555883ENST00000553300HNRNPCchr14

21707036

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21706233

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intron-intronENST00000555883ENST00000556897HNRNPCchr14

21707036

+HNRNPCchr14

21706233

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intron-intronENST00000555883ENST00000420743HNRNPCchr14

21707036

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21706233

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intron-intronENST00000556513ENST00000449098HNRNPCchr14

21707036

+HNRNPCchr14

21706233

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intron-intronENST00000556513ENST00000320084HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000556513ENST00000336053HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000556513ENST00000554969HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000556513ENST00000556142HNRNPCchr14

21707036

+HNRNPCchr14

21706233

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intron-intronENST00000556513ENST00000554455HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000556513ENST00000430246HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000556513ENST00000553753HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000556513ENST00000555914HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000556513ENST00000555309HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000556513ENST00000556628HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000556513ENST00000555883HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000556513ENST00000556513HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000556513ENST00000557201HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000556513ENST00000553300HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000556513ENST00000556897HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000556513ENST00000420743HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000557201ENST00000449098HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000557201ENST00000320084HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000557201ENST00000336053HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000557201ENST00000554969HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000557201ENST00000556142HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000557201ENST00000554455HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000557201ENST00000430246HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000557201ENST00000553753HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000557201ENST00000555914HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000557201ENST00000555309HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000557201ENST00000556628HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000557201ENST00000555883HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000557201ENST00000556513HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000557201ENST00000557201HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000557201ENST00000553300HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000557201ENST00000556897HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000557201ENST00000420743HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000553300ENST00000449098HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000553300ENST00000320084HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000553300ENST00000336053HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000553300ENST00000554969HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000553300ENST00000556142HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000553300ENST00000554455HNRNPCchr14

21707036

+HNRNPCchr14

21706233

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intron-intronENST00000553300ENST00000430246HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000553300ENST00000553753HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000553300ENST00000555914HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000553300ENST00000555309HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000553300ENST00000556628HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000553300ENST00000555883HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000553300ENST00000556513HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000553300ENST00000557201HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000553300ENST00000553300HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000553300ENST00000556897HNRNPCchr14

21707036

+HNRNPCchr14

21706233

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intron-intronENST00000553300ENST00000420743HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000556897ENST00000449098HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000556897ENST00000320084HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000556897ENST00000336053HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000556897ENST00000554969HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000556897ENST00000556142HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000556897ENST00000554455HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000556897ENST00000430246HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000556897ENST00000553753HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000556897ENST00000555914HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000556897ENST00000555309HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000556897ENST00000556628HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000556897ENST00000555883HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000556897ENST00000556513HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000556897ENST00000557201HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000556897ENST00000553300HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000556897ENST00000556897HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000556897ENST00000420743HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000420743ENST00000449098HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000420743ENST00000320084HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000420743ENST00000336053HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000420743ENST00000554969HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000420743ENST00000556142HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000420743ENST00000554455HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000420743ENST00000430246HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000420743ENST00000553753HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000420743ENST00000555914HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000420743ENST00000555309HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000420743ENST00000556628HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000420743ENST00000555883HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000420743ENST00000556513HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000420743ENST00000557201HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000420743ENST00000553300HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000420743ENST00000556897HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+
intron-intronENST00000420743ENST00000420743HNRNPCchr14

21707036

+HNRNPCchr14

21706233

+

Top

FusionProtFeatures for HNRNPC_HNRNPC


check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
HNRNPC

P07910

HNRNPC

P07910


check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page

.

* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note


Top

FusionGeneSequence for HNRNPC_HNRNPC


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences.
(nt: nucleotides, aa: amino acids)

* Fusion amino acid sequences.

* Fusion transcript sequences (only coding sequence (CDS) region).

* Fusion transcript sequences (Full-length transcript).

Top

FusionGenePPI for HNRNPC_HNRNPC


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page

.

check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


Top

RelatedDrugs for HNRNPC_HNRNPC


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.0 2018-04-02)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

Top

RelatedDiseases for HNRNPC_HNRNPC


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource