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Fusion gene ID: 16490 |
FusionGeneSummary for HMGXB3_PAM |
Fusion gene summary |
Fusion gene information | Fusion gene name: HMGXB3_PAM | Fusion gene ID: 16490 | Hgene | Tgene | Gene symbol | HMGXB3 | PAM | Gene ID | 22993 | 23077 |
Gene name | HMG-box containing 3 | MYC binding protein 2, E3 ubiquitin protein ligase | |
Synonyms | HMGX3|SMF | Myc-bp2|PAM|Phr | |
Cytomap | 5q32 | 13q22.3 | |
Type of gene | protein-coding | protein-coding | |
Description | HMG domain-containing protein 3HMG box domain containing 3 | E3 ubiquitin-protein ligase MYCBP2HighwireRING-type E3 ubiquitin transferase MYCBP2myc-binding protein 2pam/highwire/rpm-1 proteinprotein associated with Myc | |
Modification date | 20180522 | 20180523 | |
UniProtAcc | Q12766 | P19021 | |
Ensembl transtripts involved in fusion gene | ENST00000503427, ENST00000502717, | ENST00000438793, ENST00000346918, ENST00000379787, ENST00000348126, ENST00000304400, ENST00000274392, ENST00000455264, ENST00000513648, | |
Fusion gene scores | * DoF score | 3 X 3 X 3=27 | 5 X 6 X 2=60 |
# samples | 3 | 4 | |
** MAII score | log2(3/27*10)=0.15200309344505 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | log2(4/60*10)=-0.584962500721156 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: HMGXB3 [Title/Abstract] AND PAM [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | RV | SKCM | TCGA-EB-A5KH-06A | HMGXB3 | chr5 | 149386210 | + | PAM | chr5 | 102201527 | + |
TCGA | LD | SKCM | TCGA-EB-A5KH-06A | HMGXB3 | chr5 | 149386210 | + | PAM | chr5 | 102237060 | + |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
5CDS-5UTR | ENST00000503427 | ENST00000438793 | HMGXB3 | chr5 | 149386210 | + | PAM | chr5 | 102201527 | + |
5CDS-5UTR | ENST00000503427 | ENST00000346918 | HMGXB3 | chr5 | 149386210 | + | PAM | chr5 | 102201527 | + |
5CDS-5UTR | ENST00000503427 | ENST00000379787 | HMGXB3 | chr5 | 149386210 | + | PAM | chr5 | 102201527 | + |
5CDS-5UTR | ENST00000503427 | ENST00000348126 | HMGXB3 | chr5 | 149386210 | + | PAM | chr5 | 102201527 | + |
5CDS-intron | ENST00000503427 | ENST00000304400 | HMGXB3 | chr5 | 149386210 | + | PAM | chr5 | 102201527 | + |
5CDS-intron | ENST00000503427 | ENST00000274392 | HMGXB3 | chr5 | 149386210 | + | PAM | chr5 | 102201527 | + |
5CDS-intron | ENST00000503427 | ENST00000455264 | HMGXB3 | chr5 | 149386210 | + | PAM | chr5 | 102201527 | + |
5CDS-intron | ENST00000503427 | ENST00000513648 | HMGXB3 | chr5 | 149386210 | + | PAM | chr5 | 102201527 | + |
5CDS-5UTR | ENST00000502717 | ENST00000438793 | HMGXB3 | chr5 | 149386210 | + | PAM | chr5 | 102201527 | + |
5CDS-5UTR | ENST00000502717 | ENST00000346918 | HMGXB3 | chr5 | 149386210 | + | PAM | chr5 | 102201527 | + |
5CDS-5UTR | ENST00000502717 | ENST00000379787 | HMGXB3 | chr5 | 149386210 | + | PAM | chr5 | 102201527 | + |
5CDS-5UTR | ENST00000502717 | ENST00000348126 | HMGXB3 | chr5 | 149386210 | + | PAM | chr5 | 102201527 | + |
5CDS-intron | ENST00000502717 | ENST00000304400 | HMGXB3 | chr5 | 149386210 | + | PAM | chr5 | 102201527 | + |
5CDS-intron | ENST00000502717 | ENST00000274392 | HMGXB3 | chr5 | 149386210 | + | PAM | chr5 | 102201527 | + |
5CDS-intron | ENST00000502717 | ENST00000455264 | HMGXB3 | chr5 | 149386210 | + | PAM | chr5 | 102201527 | + |
5CDS-intron | ENST00000502717 | ENST00000513648 | HMGXB3 | chr5 | 149386210 | + | PAM | chr5 | 102201527 | + |
In-frame | ENST00000503427 | ENST00000438793 | HMGXB3 | chr5 | 149386210 | + | PAM | chr5 | 102237060 | + |
In-frame | ENST00000503427 | ENST00000346918 | HMGXB3 | chr5 | 149386210 | + | PAM | chr5 | 102237060 | + |
5CDS-5UTR | ENST00000503427 | ENST00000379787 | HMGXB3 | chr5 | 149386210 | + | PAM | chr5 | 102237060 | + |
5CDS-5UTR | ENST00000503427 | ENST00000348126 | HMGXB3 | chr5 | 149386210 | + | PAM | chr5 | 102237060 | + |
5CDS-5UTR | ENST00000503427 | ENST00000304400 | HMGXB3 | chr5 | 149386210 | + | PAM | chr5 | 102237060 | + |
5CDS-intron | ENST00000503427 | ENST00000274392 | HMGXB3 | chr5 | 149386210 | + | PAM | chr5 | 102237060 | + |
5CDS-intron | ENST00000503427 | ENST00000455264 | HMGXB3 | chr5 | 149386210 | + | PAM | chr5 | 102237060 | + |
5CDS-intron | ENST00000503427 | ENST00000513648 | HMGXB3 | chr5 | 149386210 | + | PAM | chr5 | 102237060 | + |
In-frame | ENST00000502717 | ENST00000438793 | HMGXB3 | chr5 | 149386210 | + | PAM | chr5 | 102237060 | + |
In-frame | ENST00000502717 | ENST00000346918 | HMGXB3 | chr5 | 149386210 | + | PAM | chr5 | 102237060 | + |
5CDS-5UTR | ENST00000502717 | ENST00000379787 | HMGXB3 | chr5 | 149386210 | + | PAM | chr5 | 102237060 | + |
5CDS-5UTR | ENST00000502717 | ENST00000348126 | HMGXB3 | chr5 | 149386210 | + | PAM | chr5 | 102237060 | + |
5CDS-5UTR | ENST00000502717 | ENST00000304400 | HMGXB3 | chr5 | 149386210 | + | PAM | chr5 | 102237060 | + |
5CDS-intron | ENST00000502717 | ENST00000274392 | HMGXB3 | chr5 | 149386210 | + | PAM | chr5 | 102237060 | + |
5CDS-intron | ENST00000502717 | ENST00000455264 | HMGXB3 | chr5 | 149386210 | + | PAM | chr5 | 102237060 | + |
5CDS-intron | ENST00000502717 | ENST00000513648 | HMGXB3 | chr5 | 149386210 | + | PAM | chr5 | 102237060 | + |
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FusionProtFeatures for HMGXB3_PAM |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
HMGXB3 | PAM |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | >PAM | chr5:149386210 | chr5:102237060 | ENST00000304400 | + | 1 | 25 | 495_817 | 70 | 975 | Region | Peptidyl-alpha-hydroxyglycine alpha-amidating lyase |
Tgene | >PAM | chr5:149386210 | chr5:102237060 | ENST00000346918 | + | 1 | 23 | 495_817 | 70 | 888 | Region | Peptidyl-alpha-hydroxyglycine alpha-amidating lyase |
Tgene | >PAM | chr5:149386210 | chr5:102237060 | ENST00000348126 | + | 1 | 24 | 495_817 | 70 | 867 | Region | Peptidyl-alpha-hydroxyglycine alpha-amidating lyase |
Tgene | >PAM | chr5:149386210 | chr5:102237060 | ENST00000438793 | + | 1 | 25 | 495_817 | 70 | 974 | Region | Peptidyl-alpha-hydroxyglycine alpha-amidating lyase |
Tgene | >PAM | chr5:149386210 | chr5:102237060 | ENST00000455264 | + | 1 | 24 | 495_817 | 70 | 906 | Region | Peptidyl-alpha-hydroxyglycine alpha-amidating lyase |
Tgene | >PAM | chr5:149386210 | chr5:102237060 | ENST00000304400 | + | 1 | 25 | 498_541 | 70 | 975 | Repeat | Note=NHL 1 |
Tgene | >PAM | chr5:149386210 | chr5:102237060 | ENST00000304400 | + | 1 | 25 | 567_608 | 70 | 975 | Repeat | Note=NHL 2 |
Tgene | >PAM | chr5:149386210 | chr5:102237060 | ENST00000304400 | + | 1 | 25 | 617_662 | 70 | 975 | Repeat | Note=NHL 3 |
Tgene | >PAM | chr5:149386210 | chr5:102237060 | ENST00000304400 | + | 1 | 25 | 670_714 | 70 | 975 | Repeat | Note=NHL 4 |
Tgene | >PAM | chr5:149386210 | chr5:102237060 | ENST00000304400 | + | 1 | 25 | 766_809 | 70 | 975 | Repeat | Note=NHL 5 |
Tgene | >PAM | chr5:149386210 | chr5:102237060 | ENST00000346918 | + | 1 | 23 | 498_541 | 70 | 888 | Repeat | Note=NHL 1 |
Tgene | >PAM | chr5:149386210 | chr5:102237060 | ENST00000346918 | + | 1 | 23 | 567_608 | 70 | 888 | Repeat | Note=NHL 2 |
Tgene | >PAM | chr5:149386210 | chr5:102237060 | ENST00000346918 | + | 1 | 23 | 617_662 | 70 | 888 | Repeat | Note=NHL 3 |
Tgene | >PAM | chr5:149386210 | chr5:102237060 | ENST00000346918 | + | 1 | 23 | 670_714 | 70 | 888 | Repeat | Note=NHL 4 |
Tgene | >PAM | chr5:149386210 | chr5:102237060 | ENST00000346918 | + | 1 | 23 | 766_809 | 70 | 888 | Repeat | Note=NHL 5 |
Tgene | >PAM | chr5:149386210 | chr5:102237060 | ENST00000348126 | + | 1 | 24 | 498_541 | 70 | 867 | Repeat | Note=NHL 1 |
Tgene | >PAM | chr5:149386210 | chr5:102237060 | ENST00000348126 | + | 1 | 24 | 567_608 | 70 | 867 | Repeat | Note=NHL 2 |
Tgene | >PAM | chr5:149386210 | chr5:102237060 | ENST00000348126 | + | 1 | 24 | 617_662 | 70 | 867 | Repeat | Note=NHL 3 |
Tgene | >PAM | chr5:149386210 | chr5:102237060 | ENST00000348126 | + | 1 | 24 | 670_714 | 70 | 867 | Repeat | Note=NHL 4 |
Tgene | >PAM | chr5:149386210 | chr5:102237060 | ENST00000348126 | + | 1 | 24 | 766_809 | 70 | 867 | Repeat | Note=NHL 5 |
Tgene | >PAM | chr5:149386210 | chr5:102237060 | ENST00000438793 | + | 1 | 25 | 498_541 | 70 | 974 | Repeat | Note=NHL 1 |
Tgene | >PAM | chr5:149386210 | chr5:102237060 | ENST00000438793 | + | 1 | 25 | 567_608 | 70 | 974 | Repeat | Note=NHL 2 |
Tgene | >PAM | chr5:149386210 | chr5:102237060 | ENST00000438793 | + | 1 | 25 | 617_662 | 70 | 974 | Repeat | Note=NHL 3 |
Tgene | >PAM | chr5:149386210 | chr5:102237060 | ENST00000438793 | + | 1 | 25 | 670_714 | 70 | 974 | Repeat | Note=NHL 4 |
Tgene | >PAM | chr5:149386210 | chr5:102237060 | ENST00000438793 | + | 1 | 25 | 766_809 | 70 | 974 | Repeat | Note=NHL 5 |
Tgene | >PAM | chr5:149386210 | chr5:102237060 | ENST00000455264 | + | 1 | 24 | 498_541 | 70 | 906 | Repeat | Note=NHL 1 |
Tgene | >PAM | chr5:149386210 | chr5:102237060 | ENST00000455264 | + | 1 | 24 | 567_608 | 70 | 906 | Repeat | Note=NHL 2 |
Tgene | >PAM | chr5:149386210 | chr5:102237060 | ENST00000455264 | + | 1 | 24 | 617_662 | 70 | 906 | Repeat | Note=NHL 3 |
Tgene | >PAM | chr5:149386210 | chr5:102237060 | ENST00000455264 | + | 1 | 24 | 670_714 | 70 | 906 | Repeat | Note=NHL 4 |
Tgene | >PAM | chr5:149386210 | chr5:102237060 | ENST00000455264 | + | 1 | 24 | 766_809 | 70 | 906 | Repeat | Note=NHL 5 |
Tgene | >PAM | chr5:149386210 | chr5:102237060 | ENST00000304400 | + | 1 | 25 | 888_973 | 70 | 975 | Topological domain | Cytoplasmic |
Tgene | >PAM | chr5:149386210 | chr5:102237060 | ENST00000346918 | + | 1 | 23 | 888_973 | 70 | 888 | Topological domain | Cytoplasmic |
Tgene | >PAM | chr5:149386210 | chr5:102237060 | ENST00000348126 | + | 1 | 24 | 888_973 | 70 | 867 | Topological domain | Cytoplasmic |
Tgene | >PAM | chr5:149386210 | chr5:102237060 | ENST00000438793 | + | 1 | 25 | 888_973 | 70 | 974 | Topological domain | Cytoplasmic |
Tgene | >PAM | chr5:149386210 | chr5:102237060 | ENST00000455264 | + | 1 | 24 | 888_973 | 70 | 906 | Topological domain | Cytoplasmic |
Tgene | >PAM | chr5:149386210 | chr5:102237060 | ENST00000304400 | + | 1 | 25 | 864_887 | 70 | 975 | Transmembrane | Helical |
Tgene | >PAM | chr5:149386210 | chr5:102237060 | ENST00000346918 | + | 1 | 23 | 864_887 | 70 | 888 | Transmembrane | Helical |
Tgene | >PAM | chr5:149386210 | chr5:102237060 | ENST00000348126 | + | 1 | 24 | 864_887 | 70 | 867 | Transmembrane | Helical |
Tgene | >PAM | chr5:149386210 | chr5:102237060 | ENST00000438793 | + | 1 | 25 | 864_887 | 70 | 974 | Transmembrane | Helical |
Tgene | >PAM | chr5:149386210 | chr5:102237060 | ENST00000455264 | + | 1 | 24 | 864_887 | 70 | 906 | Transmembrane | Helical |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | >HMGXB3 | chr5:149386210 | chr5:102237060 | ENST00000502717 | + | 3 | 20 | 1523_1532 | 104 | 1293 | Compositional bias | Note=Poly-Glu |
Hgene | >HMGXB3 | chr5:149386210 | chr5:102237060 | ENST00000502717 | + | 3 | 20 | 276_282 | 104 | 1293 | Compositional bias | Note=Poly-Lys |
Hgene | >HMGXB3 | chr5:149386210 | chr5:102237060 | ENST00000502717 | + | 3 | 20 | 518_524 | 104 | 1293 | Compositional bias | Note=Poly-Ser |
Hgene | >HMGXB3 | chr5:149386210 | chr5:102237060 | ENST00000502717 | + | 3 | 20 | 62_239 | 104 | 1293 | Compositional bias | Note=Arg-rich |
Hgene | >HMGXB3 | chr5:149386210 | chr5:102237060 | ENST00000502717 | + | 3 | 20 | 288_356 | 104 | 1293 | DNA binding | HMG box |
Tgene | PAM | chr5:149386210 | chr5:102237060 | ENST00000304400 | + | 1 | 25 | 1_494 | 70 | 975 | Region | Peptidylglycine alpha-hydroxylating monooxygenase |
Tgene | PAM | chr5:149386210 | chr5:102237060 | ENST00000346918 | + | 1 | 23 | 1_494 | 70 | 888 | Region | Peptidylglycine alpha-hydroxylating monooxygenase |
Tgene | PAM | chr5:149386210 | chr5:102237060 | ENST00000348126 | + | 1 | 24 | 1_494 | 70 | 867 | Region | Peptidylglycine alpha-hydroxylating monooxygenase |
Tgene | PAM | chr5:149386210 | chr5:102237060 | ENST00000438793 | + | 1 | 25 | 1_494 | 70 | 974 | Region | Peptidylglycine alpha-hydroxylating monooxygenase |
Tgene | PAM | chr5:149386210 | chr5:102237060 | ENST00000455264 | + | 1 | 24 | 1_494 | 70 | 906 | Region | Peptidylglycine alpha-hydroxylating monooxygenase |
Tgene | PAM | chr5:149386210 | chr5:102237060 | ENST00000304400 | + | 1 | 25 | 31_863 | 70 | 975 | Topological domain | Intragranular |
Tgene | PAM | chr5:149386210 | chr5:102237060 | ENST00000346918 | + | 1 | 23 | 31_863 | 70 | 888 | Topological domain | Intragranular |
Tgene | PAM | chr5:149386210 | chr5:102237060 | ENST00000348126 | + | 1 | 24 | 31_863 | 70 | 867 | Topological domain | Intragranular |
Tgene | PAM | chr5:149386210 | chr5:102237060 | ENST00000438793 | + | 1 | 25 | 31_863 | 70 | 974 | Topological domain | Intragranular |
Tgene | PAM | chr5:149386210 | chr5:102237060 | ENST00000455264 | + | 1 | 24 | 31_863 | 70 | 906 | Topological domain | Intragranular |
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FusionGeneSequence for HMGXB3_PAM |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_HMGXB3_ENST00000503427_chr5_149386210_+_PAM_ENST00000438793_chr5_102237060_+_1008aa MDASYDGTEVTVVMEEIEEAYCYTSPGPPKKKKKYKIHGEKTKKPRSAYLLYYYDIYLKVQQELPHLPQSEINKKISESWRLLSVAERSY YLEKAKLEKEGLDPSDTYFCMSMRIPVDEEAFVIDFKPRASMDTVHHMLLFGCNMPSSTGSYWFCDEGTCTDKANILYAWARNAPPTRLP KGVGFRVGGETGSKYFVLQVHYGDISAFRDNNKDCSGVSLHLTRLPQPLIAGMYLMMSVDTVIPAGEKVVNSDISCHYKNYPMHVFAYRV HTHHLGKVVSGYRVRNGQWTLIGRQSPQLPQAFYPVGHPVDVSFGDLLAARCVFTGEGRTEATHIGGTSSDEMCNLYIMYYMEAKHAVSF MTCTQNVAPDMFRTIPPEANIPIPVKSDMVMMHEHHKETEYKDKIPLLQQPKREEEEVLDQGDFYSLLSKLLGEREDVVHVHKYNPTEKA ESESDLVAEIANVVQKKDLGRSDAREGAEHERGNAILVRDRIHKFHRLVSTLRPPESRVFSLQQPPPGEGTWEPEHTGDFHMEEALDWPG VYLLPGQVSGVALDPKNNLVIFHRGDHVWDGNSFDSKFVYQQIGLGPIEEDTILVIDPNNAAVLQSSGKNLFYLPHGLSIDKDGNYWVTD VALHQVFKLDPNNKEGPVLILGRSMQPGSDQNHFCQPTDVAVDPGTGAIYVSDGYCNSRIVQFSPSGKFITQWGEESSGSSPLPGQFTVP HSLALVPLLGQLCVADRENGRIQCFKTDTKEFVREIKHSSFGRNVFAISYIPGLLFAVNGKPHFGDQEPVQGFVMNFSNGEIIDIFKPVR KHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTEKLEHRSVKKAGIEVQEIKEAEAVVETKMENKPTSSELQKMQEKQKLIKEPGSGVPV VLITTLLVIPVVVLLAIAIFIRWKKSRAFGDSEHKLETSSGRVLGRFRGKGSGGLNLGNFFASRKGYSRKGFDRLSTEGSDQEKEDDGSE >In-frame_HMGXB3_ENST00000503427_chr5_149386210_+_PAM_ENST00000346918_chr5_102237060_+_922aa MDASYDGTEVTVVMEEIEEAYCYTSPGPPKKKKKYKIHGEKTKKPRSAYLLYYYDIYLKVQQELPHLPQSEINKKISESWRLLSVAERSY YLEKAKLEKEGLDPSDTYFCMSMRIPVDEEAFVIDFKPRASMDTVHHMLLFGCNMPSSTGSYWFCDEGTCTDKANILYAWARNAPPTRLP KGVGFRVGGETGSKYFVLQVHYGDISAFRDNNKDCSGVSLHLTRLPQPLIAGMYLMMSVDTVIPAGEKVVNSDISCHYKNYPMHVFAYRV HTHHLGKVVSGYRVRNGQWTLIGRQSPQLPQAFYPVGHPVDVSFGDLLAARCVFTGEGRTEATHIGGTSSDEMCNLYIMYYMEAKHAVSF MTCTQNVAPDMFRTIPPEANIPIPVKSDMVMMHEHHKETEYKDKIPLLQQPKREEEEVLDQGDFYSLLSKLLGEREDVVHVHKYNPTEKA ESESDLVAEIANVVQKKDLGRSDAREGAEHERGNAILVRDRIHKFHRLVSTLRPPESRVFSLQQPPPGEGTWEPEHTGDFHMEEALDWPG VYLLPGQVSGVALDPKNNLVIFHRGDHVWDGNSFDSKFVYQQIGLGPIEEDTILVIDPNNAAVLQSSGKNLFYLPHGLSIDKDGNYWVTD VALHQVFKLDPNNKEGPVLILGRSMQPGSDQNHFCQPTDVAVDPGTGAIYVSDGYCNSRIVQFSPSGKFITQWGEESSGSSPLPGQFTVP HSLALVPLLGQLCVADRENGRIQCFKTDTKEFVREIKHSSFGRNVFAISYIPGLLFAVNGKPHFGDQEPVQGFVMNFSNGEIIDIFKPVR KHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTEKLEHRSVKKAGIEVQEIKGKGSGGLNLGNFFASRKGYSRKGFDRLSTEGSDQEKED >In-frame_HMGXB3_ENST00000502717_chr5_149386210_+_PAM_ENST00000438793_chr5_102237060_+_1008aa MDASYDGTEVTVVMEEIEEAYCYTSPGPPKKKKKYKIHGEKTKKPRSAYLLYYYDIYLKVQQELPHLPQSEINKKISESWRLLSVAERSY YLEKAKLEKEGLDPSDTYFCMSMRIPVDEEAFVIDFKPRASMDTVHHMLLFGCNMPSSTGSYWFCDEGTCTDKANILYAWARNAPPTRLP KGVGFRVGGETGSKYFVLQVHYGDISAFRDNNKDCSGVSLHLTRLPQPLIAGMYLMMSVDTVIPAGEKVVNSDISCHYKNYPMHVFAYRV HTHHLGKVVSGYRVRNGQWTLIGRQSPQLPQAFYPVGHPVDVSFGDLLAARCVFTGEGRTEATHIGGTSSDEMCNLYIMYYMEAKHAVSF MTCTQNVAPDMFRTIPPEANIPIPVKSDMVMMHEHHKETEYKDKIPLLQQPKREEEEVLDQGDFYSLLSKLLGEREDVVHVHKYNPTEKA ESESDLVAEIANVVQKKDLGRSDAREGAEHERGNAILVRDRIHKFHRLVSTLRPPESRVFSLQQPPPGEGTWEPEHTGDFHMEEALDWPG VYLLPGQVSGVALDPKNNLVIFHRGDHVWDGNSFDSKFVYQQIGLGPIEEDTILVIDPNNAAVLQSSGKNLFYLPHGLSIDKDGNYWVTD VALHQVFKLDPNNKEGPVLILGRSMQPGSDQNHFCQPTDVAVDPGTGAIYVSDGYCNSRIVQFSPSGKFITQWGEESSGSSPLPGQFTVP HSLALVPLLGQLCVADRENGRIQCFKTDTKEFVREIKHSSFGRNVFAISYIPGLLFAVNGKPHFGDQEPVQGFVMNFSNGEIIDIFKPVR KHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTEKLEHRSVKKAGIEVQEIKEAEAVVETKMENKPTSSELQKMQEKQKLIKEPGSGVPV VLITTLLVIPVVVLLAIAIFIRWKKSRAFGDSEHKLETSSGRVLGRFRGKGSGGLNLGNFFASRKGYSRKGFDRLSTEGSDQEKEDDGSE >In-frame_HMGXB3_ENST00000502717_chr5_149386210_+_PAM_ENST00000346918_chr5_102237060_+_922aa MDASYDGTEVTVVMEEIEEAYCYTSPGPPKKKKKYKIHGEKTKKPRSAYLLYYYDIYLKVQQELPHLPQSEINKKISESWRLLSVAERSY YLEKAKLEKEGLDPSDTYFCMSMRIPVDEEAFVIDFKPRASMDTVHHMLLFGCNMPSSTGSYWFCDEGTCTDKANILYAWARNAPPTRLP KGVGFRVGGETGSKYFVLQVHYGDISAFRDNNKDCSGVSLHLTRLPQPLIAGMYLMMSVDTVIPAGEKVVNSDISCHYKNYPMHVFAYRV HTHHLGKVVSGYRVRNGQWTLIGRQSPQLPQAFYPVGHPVDVSFGDLLAARCVFTGEGRTEATHIGGTSSDEMCNLYIMYYMEAKHAVSF MTCTQNVAPDMFRTIPPEANIPIPVKSDMVMMHEHHKETEYKDKIPLLQQPKREEEEVLDQGDFYSLLSKLLGEREDVVHVHKYNPTEKA ESESDLVAEIANVVQKKDLGRSDAREGAEHERGNAILVRDRIHKFHRLVSTLRPPESRVFSLQQPPPGEGTWEPEHTGDFHMEEALDWPG VYLLPGQVSGVALDPKNNLVIFHRGDHVWDGNSFDSKFVYQQIGLGPIEEDTILVIDPNNAAVLQSSGKNLFYLPHGLSIDKDGNYWVTD VALHQVFKLDPNNKEGPVLILGRSMQPGSDQNHFCQPTDVAVDPGTGAIYVSDGYCNSRIVQFSPSGKFITQWGEESSGSSPLPGQFTVP HSLALVPLLGQLCVADRENGRIQCFKTDTKEFVREIKHSSFGRNVFAISYIPGLLFAVNGKPHFGDQEPVQGFVMNFSNGEIIDIFKPVR KHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTEKLEHRSVKKAGIEVQEIKGKGSGGLNLGNFFASRKGYSRKGFDRLSTEGSDQEKED |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_HMGXB3_ENST00000503427_chr5_149386210_+_PAM_ENST00000438793_chr5_102237060_+_3024nt ATGGACGCATCATATGATGGTACTGAGGTAACTGTCGTGATGGAGGAAATTGAGGAAGCCTATTGTTACACCTCTCCTGGGCCACCCAAG AAGAAGAAAAAGTATAAAATACATGGAGAAAAGACAAAGAAACCCAGGTCTGCTTACCTTCTGTACTATTACGACATCTACCTGAAAGTG CAGCAGGAGCTCCCCCACCTCCCTCAGTCTGAGATCAATAAGAAGATTAGTGAGAGTTGGAGGCTTCTCAGCGTGGCCGAGAGGAGTTAC TACTTGGAGAAAGCCAAACTAGAGAAGGAAGGTTTGGATCCTTCCGATACATACTTCTGCATGTCTATGCGAATACCAGTGGATGAGGAA GCCTTCGTGATTGACTTCAAGCCTCGAGCCAGCATGGATACTGTCCATCACATGTTACTTTTTGGATGCAATATGCCTTCATCCACTGGA AGTTACTGGTTTTGTGATGAAGGAACCTGTACAGATAAAGCCAATATTCTGTATGCCTGGGCGAGAAATGCTCCCCCTACCCGGCTCCCC AAAGGTGTTGGATTCAGAGTTGGAGGAGAGACTGGAAGTAAATACTTTGTACTACAGGTACACTATGGGGATATTAGTGCTTTTAGAGAT AATAACAAGGACTGTTCTGGTGTGTCCTTACACCTCACACGTCTGCCACAGCCTTTAATTGCTGGCATGTACCTTATGATGTCTGTTGAC ACTGTTATCCCAGCAGGAGAAAAAGTGGTGAATTCTGACATTTCATGCCATTATAAAAATTATCCAATGCATGTCTTTGCCTATAGAGTT CACACTCACCATTTAGGTAAGGTAGTAAGTGGATACAGAGTAAGAAATGGACAGTGGACACTGATTGGACGGCAGAGCCCTCAGCTGCCA CAGGCTTTCTACCCTGTGGGGCATCCAGTTGATGTAAGTTTTGGTGACCTACTGGCTGCAAGATGTGTATTCACTGGTGAAGGAAGGACA GAAGCCACACACATTGGTGGCACGTCTAGTGATGAAATGTGCAACTTATACATTATGTATTACATGGAAGCCAAGCATGCAGTTTCTTTC ATGACCTGTACCCAGAATGTAGCTCCAGATATGTTCAGAACCATACCACCAGAGGCCAACATTCCAATTCCCGTGAAGTCTGATATGGTT ATGATGCATGAACATCATAAAGAAACAGAATATAAAGATAAGATTCCTTTACTACAGCAGCCAAAACGAGAAGAAGAAGAAGTGTTAGAC CAGGGTGATTTCTATTCACTACTTTCCAAGCTGCTAGGAGAAAGGGAAGATGTTGTTCATGTGCACAAATATAATCCTACAGAAAAGGCA GAATCAGAGTCAGACCTGGTAGCTGAGATTGCAAATGTAGTCCAAAAAAAGGATCTTGGTCGATCTGATGCCAGAGAGGGTGCAGAACAT GAGAGGGGTAATGCTATTCTTGTCAGAGACAGAATTCACAAATTCCACAGACTAGTATCTACCTTGAGGCCACCAGAGAGCAGAGTTTTC TCATTACAGCAGCCCCCACCTGGTGAAGGCACCTGGGAACCAGAACACACAGGAGATTTCCACATGGAAGAGGCACTGGATTGGCCTGGA GTATACTTGTTACCAGGCCAGGTTTCTGGGGTGGCTCTAGACCCTAAGAATAACCTGGTGATTTTCCACAGAGGTGACCATGTCTGGGAT GGAAACTCGTTTGACAGCAAGTTTGTTTACCAGCAAATAGGACTCGGACCAATTGAAGAAGACACTATTCTTGTCATAGATCCAAATAAT GCTGCAGTACTCCAGTCCAGTGGAAAAAATCTGTTTTACTTGCCACATGGCTTGAGTATAGATAAAGATGGGAATTATTGGGTCACAGAC GTGGCTCTCCATCAGGTGTTCAAACTGGATCCAAACAATAAAGAAGGCCCTGTATTAATCCTGGGAAGGAGCATGCAACCAGGCAGTGAC CAGAATCACTTCTGTCAACCCACTGATGTGGCTGTGGATCCAGGCACTGGAGCCATTTATGTATCAGATGGTTACTGCAACAGCAGGATT GTGCAGTTTTCACCAAGTGGAAAGTTCATCACACAGTGGGGAGAAGAGTCTTCAGGGAGCAGTCCTCTGCCAGGCCAGTTCACTGTTCCT CACAGCTTGGCTCTTGTGCCTCTTTTGGGCCAATTATGTGTGGCAGACCGGGAAAATGGTCGGATCCAGTGTTTTAAAACTGACACCAAA GAATTTGTGAGAGAGATTAAGCATTCATCATTTGGAAGAAATGTATTTGCAATTTCATATATACCAGGCTTGCTCTTTGCAGTGAATGGG AAGCCTCATTTTGGGGACCAAGAACCTGTACAAGGATTTGTGATGAACTTTTCCAATGGGGAAATTATAGACATCTTCAAGCCAGTGCGC AAGCACTTTGATATGCCTCATGATATTGTTGCATCTGAAGATGGGACTGTGTACATTGGAGATGCTCATACCAACACCGTGTGGAAGTTC ACCTTGACTGAGAAATTGGAACATCGATCAGTTAAAAAGGCTGGCATTGAGGTCCAGGAAATCAAAGAAGCCGAGGCAGTTGTTGAAACC AAAATGGAGAACAAACCCACCTCCTCAGAATTGCAGAAGATGCAAGAGAAACAGAAACTGATCAAAGAGCCAGGCTCGGGAGTGCCTGTT GTTCTCATTACAACCCTTCTGGTTATTCCGGTGGTTGTCCTGCTGGCCATTGCCATATTTATTCGGTGGAAAAAATCAAGGGCCTTTGGA GATTCTGAACACAAACTCGAGACGAGTTCAGGAAGAGTACTGGGAAGATTTAGAGGAAAGGGAAGTGGAGGCTTAAACCTTGGTAATTTC TTTGCAAGCCGTAAGGGCTACAGTCGAAAAGGGTTTGACCGGCTTAGCACTGAGGGCAGTGACCAAGAGAAAGAGGATGATGGAAGTGAA >In-frame_HMGXB3_ENST00000503427_chr5_149386210_+_PAM_ENST00000346918_chr5_102237060_+_2766nt ATGGACGCATCATATGATGGTACTGAGGTAACTGTCGTGATGGAGGAAATTGAGGAAGCCTATTGTTACACCTCTCCTGGGCCACCCAAG AAGAAGAAAAAGTATAAAATACATGGAGAAAAGACAAAGAAACCCAGGTCTGCTTACCTTCTGTACTATTACGACATCTACCTGAAAGTG CAGCAGGAGCTCCCCCACCTCCCTCAGTCTGAGATCAATAAGAAGATTAGTGAGAGTTGGAGGCTTCTCAGCGTGGCCGAGAGGAGTTAC TACTTGGAGAAAGCCAAACTAGAGAAGGAAGGTTTGGATCCTTCCGATACATACTTCTGCATGTCTATGCGAATACCAGTGGATGAGGAA GCCTTCGTGATTGACTTCAAGCCTCGAGCCAGCATGGATACTGTCCATCACATGTTACTTTTTGGATGCAATATGCCTTCATCCACTGGA AGTTACTGGTTTTGTGATGAAGGAACCTGTACAGATAAAGCCAATATTCTGTATGCCTGGGCGAGAAATGCTCCCCCTACCCGGCTCCCC AAAGGTGTTGGATTCAGAGTTGGAGGAGAGACTGGAAGTAAATACTTTGTACTACAGGTACACTATGGGGATATTAGTGCTTTTAGAGAT AATAACAAGGACTGTTCTGGTGTGTCCTTACACCTCACACGTCTGCCACAGCCTTTAATTGCTGGCATGTACCTTATGATGTCTGTTGAC ACTGTTATCCCAGCAGGAGAAAAAGTGGTGAATTCTGACATTTCATGCCATTATAAAAATTATCCAATGCATGTCTTTGCCTATAGAGTT CACACTCACCATTTAGGTAAGGTAGTAAGTGGATACAGAGTAAGAAATGGACAGTGGACACTGATTGGACGGCAGAGCCCTCAGCTGCCA CAGGCTTTCTACCCTGTGGGGCATCCAGTTGATGTAAGTTTTGGTGACCTACTGGCTGCAAGATGTGTATTCACTGGTGAAGGAAGGACA GAAGCCACACACATTGGTGGCACGTCTAGTGATGAAATGTGCAACTTATACATTATGTATTACATGGAAGCCAAGCATGCAGTTTCTTTC ATGACCTGTACCCAGAATGTAGCTCCAGATATGTTCAGAACCATACCACCAGAGGCCAACATTCCAATTCCCGTGAAGTCTGATATGGTT ATGATGCATGAACATCATAAAGAAACAGAATATAAAGATAAGATTCCTTTACTACAGCAGCCAAAACGAGAAGAAGAAGAAGTGTTAGAC CAGGGTGATTTCTATTCACTACTTTCCAAGCTGCTAGGAGAAAGGGAAGATGTTGTTCATGTGCACAAATATAATCCTACAGAAAAGGCA GAATCAGAGTCAGACCTGGTAGCTGAGATTGCAAATGTAGTCCAAAAAAAGGATCTTGGTCGATCTGATGCCAGAGAGGGTGCAGAACAT GAGAGGGGTAATGCTATTCTTGTCAGAGACAGAATTCACAAATTCCACAGACTAGTATCTACCTTGAGGCCACCAGAGAGCAGAGTTTTC TCATTACAGCAGCCCCCACCTGGTGAAGGCACCTGGGAACCAGAACACACAGGAGATTTCCACATGGAAGAGGCACTGGATTGGCCTGGA GTATACTTGTTACCAGGCCAGGTTTCTGGGGTGGCTCTAGACCCTAAGAATAACCTGGTGATTTTCCACAGAGGTGACCATGTCTGGGAT GGAAACTCGTTTGACAGCAAGTTTGTTTACCAGCAAATAGGACTCGGACCAATTGAAGAAGACACTATTCTTGTCATAGATCCAAATAAT GCTGCAGTACTCCAGTCCAGTGGAAAAAATCTGTTTTACTTGCCACATGGCTTGAGTATAGATAAAGATGGGAATTATTGGGTCACAGAC GTGGCTCTCCATCAGGTGTTCAAACTGGATCCAAACAATAAAGAAGGCCCTGTATTAATCCTGGGAAGGAGCATGCAACCAGGCAGTGAC CAGAATCACTTCTGTCAACCCACTGATGTGGCTGTGGATCCAGGCACTGGAGCCATTTATGTATCAGATGGTTACTGCAACAGCAGGATT GTGCAGTTTTCACCAAGTGGAAAGTTCATCACACAGTGGGGAGAAGAGTCTTCAGGGAGCAGTCCTCTGCCAGGCCAGTTCACTGTTCCT CACAGCTTGGCTCTTGTGCCTCTTTTGGGCCAATTATGTGTGGCAGACCGGGAAAATGGTCGGATCCAGTGTTTTAAAACTGACACCAAA GAATTTGTGAGAGAGATTAAGCATTCATCATTTGGAAGAAATGTATTTGCAATTTCATATATACCAGGCTTGCTCTTTGCAGTGAATGGG AAGCCTCATTTTGGGGACCAAGAACCTGTACAAGGATTTGTGATGAACTTTTCCAATGGGGAAATTATAGACATCTTCAAGCCAGTGCGC AAGCACTTTGATATGCCTCATGATATTGTTGCATCTGAAGATGGGACTGTGTACATTGGAGATGCTCATACCAACACCGTGTGGAAGTTC ACCTTGACTGAGAAATTGGAACATCGATCAGTTAAAAAGGCTGGCATTGAGGTCCAGGAAATCAAAGGAAAGGGAAGTGGAGGCTTAAAC CTTGGTAATTTCTTTGCAAGCCGTAAGGGCTACAGTCGAAAAGGGTTTGACCGGCTTAGCACTGAGGGCAGTGACCAAGAGAAAGAGGAT >In-frame_HMGXB3_ENST00000502717_chr5_149386210_+_PAM_ENST00000438793_chr5_102237060_+_3024nt ATGGACGCATCATATGATGGTACTGAGGTAACTGTCGTGATGGAGGAAATTGAGGAAGCCTATTGTTACACCTCTCCTGGGCCACCCAAG AAGAAGAAAAAGTATAAAATACATGGAGAAAAGACAAAGAAACCCAGGTCTGCTTACCTTCTGTACTATTACGACATCTACCTGAAAGTG CAGCAGGAGCTCCCCCACCTCCCTCAGTCTGAGATCAATAAGAAGATTAGTGAGAGTTGGAGGCTTCTCAGCGTGGCCGAGAGGAGTTAC TACTTGGAGAAAGCCAAACTAGAGAAGGAAGGTTTGGATCCTTCCGATACATACTTCTGCATGTCTATGCGAATACCAGTGGATGAGGAA GCCTTCGTGATTGACTTCAAGCCTCGAGCCAGCATGGATACTGTCCATCACATGTTACTTTTTGGATGCAATATGCCTTCATCCACTGGA AGTTACTGGTTTTGTGATGAAGGAACCTGTACAGATAAAGCCAATATTCTGTATGCCTGGGCGAGAAATGCTCCCCCTACCCGGCTCCCC AAAGGTGTTGGATTCAGAGTTGGAGGAGAGACTGGAAGTAAATACTTTGTACTACAGGTACACTATGGGGATATTAGTGCTTTTAGAGAT AATAACAAGGACTGTTCTGGTGTGTCCTTACACCTCACACGTCTGCCACAGCCTTTAATTGCTGGCATGTACCTTATGATGTCTGTTGAC ACTGTTATCCCAGCAGGAGAAAAAGTGGTGAATTCTGACATTTCATGCCATTATAAAAATTATCCAATGCATGTCTTTGCCTATAGAGTT CACACTCACCATTTAGGTAAGGTAGTAAGTGGATACAGAGTAAGAAATGGACAGTGGACACTGATTGGACGGCAGAGCCCTCAGCTGCCA CAGGCTTTCTACCCTGTGGGGCATCCAGTTGATGTAAGTTTTGGTGACCTACTGGCTGCAAGATGTGTATTCACTGGTGAAGGAAGGACA GAAGCCACACACATTGGTGGCACGTCTAGTGATGAAATGTGCAACTTATACATTATGTATTACATGGAAGCCAAGCATGCAGTTTCTTTC ATGACCTGTACCCAGAATGTAGCTCCAGATATGTTCAGAACCATACCACCAGAGGCCAACATTCCAATTCCCGTGAAGTCTGATATGGTT ATGATGCATGAACATCATAAAGAAACAGAATATAAAGATAAGATTCCTTTACTACAGCAGCCAAAACGAGAAGAAGAAGAAGTGTTAGAC CAGGGTGATTTCTATTCACTACTTTCCAAGCTGCTAGGAGAAAGGGAAGATGTTGTTCATGTGCACAAATATAATCCTACAGAAAAGGCA GAATCAGAGTCAGACCTGGTAGCTGAGATTGCAAATGTAGTCCAAAAAAAGGATCTTGGTCGATCTGATGCCAGAGAGGGTGCAGAACAT GAGAGGGGTAATGCTATTCTTGTCAGAGACAGAATTCACAAATTCCACAGACTAGTATCTACCTTGAGGCCACCAGAGAGCAGAGTTTTC TCATTACAGCAGCCCCCACCTGGTGAAGGCACCTGGGAACCAGAACACACAGGAGATTTCCACATGGAAGAGGCACTGGATTGGCCTGGA GTATACTTGTTACCAGGCCAGGTTTCTGGGGTGGCTCTAGACCCTAAGAATAACCTGGTGATTTTCCACAGAGGTGACCATGTCTGGGAT GGAAACTCGTTTGACAGCAAGTTTGTTTACCAGCAAATAGGACTCGGACCAATTGAAGAAGACACTATTCTTGTCATAGATCCAAATAAT GCTGCAGTACTCCAGTCCAGTGGAAAAAATCTGTTTTACTTGCCACATGGCTTGAGTATAGATAAAGATGGGAATTATTGGGTCACAGAC GTGGCTCTCCATCAGGTGTTCAAACTGGATCCAAACAATAAAGAAGGCCCTGTATTAATCCTGGGAAGGAGCATGCAACCAGGCAGTGAC CAGAATCACTTCTGTCAACCCACTGATGTGGCTGTGGATCCAGGCACTGGAGCCATTTATGTATCAGATGGTTACTGCAACAGCAGGATT GTGCAGTTTTCACCAAGTGGAAAGTTCATCACACAGTGGGGAGAAGAGTCTTCAGGGAGCAGTCCTCTGCCAGGCCAGTTCACTGTTCCT CACAGCTTGGCTCTTGTGCCTCTTTTGGGCCAATTATGTGTGGCAGACCGGGAAAATGGTCGGATCCAGTGTTTTAAAACTGACACCAAA GAATTTGTGAGAGAGATTAAGCATTCATCATTTGGAAGAAATGTATTTGCAATTTCATATATACCAGGCTTGCTCTTTGCAGTGAATGGG AAGCCTCATTTTGGGGACCAAGAACCTGTACAAGGATTTGTGATGAACTTTTCCAATGGGGAAATTATAGACATCTTCAAGCCAGTGCGC AAGCACTTTGATATGCCTCATGATATTGTTGCATCTGAAGATGGGACTGTGTACATTGGAGATGCTCATACCAACACCGTGTGGAAGTTC ACCTTGACTGAGAAATTGGAACATCGATCAGTTAAAAAGGCTGGCATTGAGGTCCAGGAAATCAAAGAAGCCGAGGCAGTTGTTGAAACC AAAATGGAGAACAAACCCACCTCCTCAGAATTGCAGAAGATGCAAGAGAAACAGAAACTGATCAAAGAGCCAGGCTCGGGAGTGCCTGTT GTTCTCATTACAACCCTTCTGGTTATTCCGGTGGTTGTCCTGCTGGCCATTGCCATATTTATTCGGTGGAAAAAATCAAGGGCCTTTGGA GATTCTGAACACAAACTCGAGACGAGTTCAGGAAGAGTACTGGGAAGATTTAGAGGAAAGGGAAGTGGAGGCTTAAACCTTGGTAATTTC TTTGCAAGCCGTAAGGGCTACAGTCGAAAAGGGTTTGACCGGCTTAGCACTGAGGGCAGTGACCAAGAGAAAGAGGATGATGGAAGTGAA >In-frame_HMGXB3_ENST00000502717_chr5_149386210_+_PAM_ENST00000346918_chr5_102237060_+_2766nt ATGGACGCATCATATGATGGTACTGAGGTAACTGTCGTGATGGAGGAAATTGAGGAAGCCTATTGTTACACCTCTCCTGGGCCACCCAAG AAGAAGAAAAAGTATAAAATACATGGAGAAAAGACAAAGAAACCCAGGTCTGCTTACCTTCTGTACTATTACGACATCTACCTGAAAGTG CAGCAGGAGCTCCCCCACCTCCCTCAGTCTGAGATCAATAAGAAGATTAGTGAGAGTTGGAGGCTTCTCAGCGTGGCCGAGAGGAGTTAC TACTTGGAGAAAGCCAAACTAGAGAAGGAAGGTTTGGATCCTTCCGATACATACTTCTGCATGTCTATGCGAATACCAGTGGATGAGGAA GCCTTCGTGATTGACTTCAAGCCTCGAGCCAGCATGGATACTGTCCATCACATGTTACTTTTTGGATGCAATATGCCTTCATCCACTGGA AGTTACTGGTTTTGTGATGAAGGAACCTGTACAGATAAAGCCAATATTCTGTATGCCTGGGCGAGAAATGCTCCCCCTACCCGGCTCCCC AAAGGTGTTGGATTCAGAGTTGGAGGAGAGACTGGAAGTAAATACTTTGTACTACAGGTACACTATGGGGATATTAGTGCTTTTAGAGAT AATAACAAGGACTGTTCTGGTGTGTCCTTACACCTCACACGTCTGCCACAGCCTTTAATTGCTGGCATGTACCTTATGATGTCTGTTGAC ACTGTTATCCCAGCAGGAGAAAAAGTGGTGAATTCTGACATTTCATGCCATTATAAAAATTATCCAATGCATGTCTTTGCCTATAGAGTT CACACTCACCATTTAGGTAAGGTAGTAAGTGGATACAGAGTAAGAAATGGACAGTGGACACTGATTGGACGGCAGAGCCCTCAGCTGCCA CAGGCTTTCTACCCTGTGGGGCATCCAGTTGATGTAAGTTTTGGTGACCTACTGGCTGCAAGATGTGTATTCACTGGTGAAGGAAGGACA GAAGCCACACACATTGGTGGCACGTCTAGTGATGAAATGTGCAACTTATACATTATGTATTACATGGAAGCCAAGCATGCAGTTTCTTTC ATGACCTGTACCCAGAATGTAGCTCCAGATATGTTCAGAACCATACCACCAGAGGCCAACATTCCAATTCCCGTGAAGTCTGATATGGTT ATGATGCATGAACATCATAAAGAAACAGAATATAAAGATAAGATTCCTTTACTACAGCAGCCAAAACGAGAAGAAGAAGAAGTGTTAGAC CAGGGTGATTTCTATTCACTACTTTCCAAGCTGCTAGGAGAAAGGGAAGATGTTGTTCATGTGCACAAATATAATCCTACAGAAAAGGCA GAATCAGAGTCAGACCTGGTAGCTGAGATTGCAAATGTAGTCCAAAAAAAGGATCTTGGTCGATCTGATGCCAGAGAGGGTGCAGAACAT GAGAGGGGTAATGCTATTCTTGTCAGAGACAGAATTCACAAATTCCACAGACTAGTATCTACCTTGAGGCCACCAGAGAGCAGAGTTTTC TCATTACAGCAGCCCCCACCTGGTGAAGGCACCTGGGAACCAGAACACACAGGAGATTTCCACATGGAAGAGGCACTGGATTGGCCTGGA GTATACTTGTTACCAGGCCAGGTTTCTGGGGTGGCTCTAGACCCTAAGAATAACCTGGTGATTTTCCACAGAGGTGACCATGTCTGGGAT GGAAACTCGTTTGACAGCAAGTTTGTTTACCAGCAAATAGGACTCGGACCAATTGAAGAAGACACTATTCTTGTCATAGATCCAAATAAT GCTGCAGTACTCCAGTCCAGTGGAAAAAATCTGTTTTACTTGCCACATGGCTTGAGTATAGATAAAGATGGGAATTATTGGGTCACAGAC GTGGCTCTCCATCAGGTGTTCAAACTGGATCCAAACAATAAAGAAGGCCCTGTATTAATCCTGGGAAGGAGCATGCAACCAGGCAGTGAC CAGAATCACTTCTGTCAACCCACTGATGTGGCTGTGGATCCAGGCACTGGAGCCATTTATGTATCAGATGGTTACTGCAACAGCAGGATT GTGCAGTTTTCACCAAGTGGAAAGTTCATCACACAGTGGGGAGAAGAGTCTTCAGGGAGCAGTCCTCTGCCAGGCCAGTTCACTGTTCCT CACAGCTTGGCTCTTGTGCCTCTTTTGGGCCAATTATGTGTGGCAGACCGGGAAAATGGTCGGATCCAGTGTTTTAAAACTGACACCAAA GAATTTGTGAGAGAGATTAAGCATTCATCATTTGGAAGAAATGTATTTGCAATTTCATATATACCAGGCTTGCTCTTTGCAGTGAATGGG AAGCCTCATTTTGGGGACCAAGAACCTGTACAAGGATTTGTGATGAACTTTTCCAATGGGGAAATTATAGACATCTTCAAGCCAGTGCGC AAGCACTTTGATATGCCTCATGATATTGTTGCATCTGAAGATGGGACTGTGTACATTGGAGATGCTCATACCAACACCGTGTGGAAGTTC ACCTTGACTGAGAAATTGGAACATCGATCAGTTAAAAAGGCTGGCATTGAGGTCCAGGAAATCAAAGGAAAGGGAAGTGGAGGCTTAAAC CTTGGTAATTTCTTTGCAAGCCGTAAGGGCTACAGTCGAAAAGGGTTTGACCGGCTTAGCACTGAGGGCAGTGACCAAGAGAAAGAGGAT |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_HMGXB3_ENST00000503427_chr5_149386210_+_PAM_ENST00000438793_chr5_102237060_+_5925nt ATGAGAGGGAAAGACTGAGACAGGCTGAGGTCAGGCCTTGAACGTCGTGCTGAGGAGAGGGTGGTATTGTAGGCTTCCCAGCGCCCGACG TGGCTCTGAAAGGTGAGGCGGGGCCTAGATCCCTCACGCTCAGCACAGCCCCGCCCCTGTTACCTGAACGCCCCACAGCAGTGCCCGGGG GCTGAGCGGCCGGGGCGTCCCACCGCCGGCAGCCACAGCTTCCTCCTCCGCCCGGGACCTCTGGCCGGAAGCAGTCCGTTCGCCTTACTA GACCCGCTCCAAGCCTTTGAGCAGTTCGTGTGGGTCCGCTCCCAAGCTAGGGCTGGGCTGTTGCGCTTGCGCCAGGGGTCGCATGCAGTC ACGCGCTGCCGACCGCTTCCGGTGCGCCGCGAGGGCCGCCGGGACGGGTCTCCCTGGCGATCCGTGGTGTGCCGCTACTGCCGGTGCAGC CGCCAAACCGGTGCCTCGGTGACGACCGTGTCCCTGCCGTCTTCCTCGAGCTCCCCGGGGCTTGACCCCCGGGGCCCTCGGCAGGCATCG GTGAGGAGCCTGCGGAGCGAACCTGTGCTCCTATTCTTGCCCTTCAGGACCCCATATCGCGACTCCGAGGAGGGGAAGCGAGAGGGGCTG TCGCGACTCCGCGCCGTGTGTCGCCGGGCGGGGCCGCGGGGCCGGGGCTCCTTCAGCCCCCGGGATGCGCGCGCGAGCCCTCGCCTCCAC TTCCTTGTTGCTGCTGTCACGACTGGAGCCGCCTCTCGCCGACAGCGGGGAGCGCGAGTGCGCCAGCCATCCCCCTCGTCCAGCCGCCGG GCCAAGCGCCTCCGGGAATGTGAGCGGCGCAGCTTGCACGCTCCTCCGGCCATGGACGCATCATATGATGGTACTGAGGTAACTGTCGTG ATGGAGGAAATTGAGGAAGCCTATTGTTACACCTCTCCTGGGCCACCCAAGAAGAAGAAAAAGTATAAAATACATGGAGAAAAGACAAAG AAACCCAGGTCTGCTTACCTTCTGTACTATTACGACATCTACCTGAAAGTGCAGCAGGAGCTCCCCCACCTCCCTCAGTCTGAGATCAAT AAGAAGATTAGTGAGAGTTGGAGGCTTCTCAGCGTGGCCGAGAGGAGTTACTACTTGGAGAAAGCCAAACTAGAGAAGGAAGGTTTGGAT CCTTCCGATACATACTTCTGCATGTCTATGCGAATACCAGTGGATGAGGAAGCCTTCGTGATTGACTTCAAGCCTCGAGCCAGCATGGAT ACTGTCCATCACATGTTACTTTTTGGATGCAATATGCCTTCATCCACTGGAAGTTACTGGTTTTGTGATGAAGGAACCTGTACAGATAAA GCCAATATTCTGTATGCCTGGGCGAGAAATGCTCCCCCTACCCGGCTCCCCAAAGGTGTTGGATTCAGAGTTGGAGGAGAGACTGGAAGT AAATACTTTGTACTACAGGTACACTATGGGGATATTAGTGCTTTTAGAGATAATAACAAGGACTGTTCTGGTGTGTCCTTACACCTCACA CGTCTGCCACAGCCTTTAATTGCTGGCATGTACCTTATGATGTCTGTTGACACTGTTATCCCAGCAGGAGAAAAAGTGGTGAATTCTGAC ATTTCATGCCATTATAAAAATTATCCAATGCATGTCTTTGCCTATAGAGTTCACACTCACCATTTAGGTAAGGTAGTAAGTGGATACAGA GTAAGAAATGGACAGTGGACACTGATTGGACGGCAGAGCCCTCAGCTGCCACAGGCTTTCTACCCTGTGGGGCATCCAGTTGATGTAAGT TTTGGTGACCTACTGGCTGCAAGATGTGTATTCACTGGTGAAGGAAGGACAGAAGCCACACACATTGGTGGCACGTCTAGTGATGAAATG TGCAACTTATACATTATGTATTACATGGAAGCCAAGCATGCAGTTTCTTTCATGACCTGTACCCAGAATGTAGCTCCAGATATGTTCAGA ACCATACCACCAGAGGCCAACATTCCAATTCCCGTGAAGTCTGATATGGTTATGATGCATGAACATCATAAAGAAACAGAATATAAAGAT AAGATTCCTTTACTACAGCAGCCAAAACGAGAAGAAGAAGAAGTGTTAGACCAGGGTGATTTCTATTCACTACTTTCCAAGCTGCTAGGA GAAAGGGAAGATGTTGTTCATGTGCACAAATATAATCCTACAGAAAAGGCAGAATCAGAGTCAGACCTGGTAGCTGAGATTGCAAATGTA GTCCAAAAAAAGGATCTTGGTCGATCTGATGCCAGAGAGGGTGCAGAACATGAGAGGGGTAATGCTATTCTTGTCAGAGACAGAATTCAC AAATTCCACAGACTAGTATCTACCTTGAGGCCACCAGAGAGCAGAGTTTTCTCATTACAGCAGCCCCCACCTGGTGAAGGCACCTGGGAA CCAGAACACACAGGAGATTTCCACATGGAAGAGGCACTGGATTGGCCTGGAGTATACTTGTTACCAGGCCAGGTTTCTGGGGTGGCTCTA GACCCTAAGAATAACCTGGTGATTTTCCACAGAGGTGACCATGTCTGGGATGGAAACTCGTTTGACAGCAAGTTTGTTTACCAGCAAATA GGACTCGGACCAATTGAAGAAGACACTATTCTTGTCATAGATCCAAATAATGCTGCAGTACTCCAGTCCAGTGGAAAAAATCTGTTTTAC TTGCCACATGGCTTGAGTATAGATAAAGATGGGAATTATTGGGTCACAGACGTGGCTCTCCATCAGGTGTTCAAACTGGATCCAAACAAT AAAGAAGGCCCTGTATTAATCCTGGGAAGGAGCATGCAACCAGGCAGTGACCAGAATCACTTCTGTCAACCCACTGATGTGGCTGTGGAT CCAGGCACTGGAGCCATTTATGTATCAGATGGTTACTGCAACAGCAGGATTGTGCAGTTTTCACCAAGTGGAAAGTTCATCACACAGTGG GGAGAAGAGTCTTCAGGGAGCAGTCCTCTGCCAGGCCAGTTCACTGTTCCTCACAGCTTGGCTCTTGTGCCTCTTTTGGGCCAATTATGT GTGGCAGACCGGGAAAATGGTCGGATCCAGTGTTTTAAAACTGACACCAAAGAATTTGTGAGAGAGATTAAGCATTCATCATTTGGAAGA AATGTATTTGCAATTTCATATATACCAGGCTTGCTCTTTGCAGTGAATGGGAAGCCTCATTTTGGGGACCAAGAACCTGTACAAGGATTT GTGATGAACTTTTCCAATGGGGAAATTATAGACATCTTCAAGCCAGTGCGCAAGCACTTTGATATGCCTCATGATATTGTTGCATCTGAA GATGGGACTGTGTACATTGGAGATGCTCATACCAACACCGTGTGGAAGTTCACCTTGACTGAGAAATTGGAACATCGATCAGTTAAAAAG GCTGGCATTGAGGTCCAGGAAATCAAAGAAGCCGAGGCAGTTGTTGAAACCAAAATGGAGAACAAACCCACCTCCTCAGAATTGCAGAAG ATGCAAGAGAAACAGAAACTGATCAAAGAGCCAGGCTCGGGAGTGCCTGTTGTTCTCATTACAACCCTTCTGGTTATTCCGGTGGTTGTC CTGCTGGCCATTGCCATATTTATTCGGTGGAAAAAATCAAGGGCCTTTGGAGATTCTGAACACAAACTCGAGACGAGTTCAGGAAGAGTA CTGGGAAGATTTAGAGGAAAGGGAAGTGGAGGCTTAAACCTTGGTAATTTCTTTGCAAGCCGTAAGGGCTACAGTCGAAAAGGGTTTGAC CGGCTTAGCACTGAGGGCAGTGACCAAGAGAAAGAGGATGATGGAAGTGAATCAGAAGAGGAGTATTCAGCACCTCTGCCTGCGCTCGCA CCTTCCTCCTCCTGAAAACCAAGCTTTGATTTAGATTGAGTAAGATTTACCCAGAATGTCAGATTCCTTTCCCTTTAGCACGTTTAAAGT TCTGTGTATTTAATTGTAAACTGTACTAGTCTGTGTGGGACTGTACACACTTTATTTACTTCGTTTTGGTTAAGTTGGCTTCTGTTTCTA GTTGAGGAGTTTCCTAAAAGTTCATAACAGTGCCATTGTCTTTATATGAACATAGACTAGAGAAACCGTCCTCTTTTTCCATCATAATTC TAATCTAACAATGGAAGATTTGCCCATTTACACTTTTGAGACTTTTTGGTGGATGTAAATAACCCCATTCTTTGCTTGAACACAGTATTT TCCCAATAGCACTTTCATTGCCAGTGTCTTTCTTTGGTGCCTTTCCTGTTCAGCATTCTTAGCCTGTGGCAGTAAAGAGAAACTTTGTGC TACATGACGACAAAGCTGCTAAATCTCCTATTTTTTTAAAATCACTAACATTATATTGCAATGAAGGAAATAAAAAAGTCTCTATTTAAA TTCTTTTTTAAATTTTCTTCAGTTGGTGTGTTTTTGGGATGTCTTATTTTTAGATGGTTACACTGTTAGAACACTATTTTCAGAATCTGA ATGTAATTTGTGTAATAAAGTGTTTTCAGAGCATTAGCTGTCAGTGTATTTTCCAGTTTTTGCGTATTTGCAGATTTTACATACAACTTT TATAATAATTACACAAACCCACAAATATTAGTGAAACTTACTCGATGTCTTCAACTAAAAGAAATGTGTGTATTGTACAAAATTTAGAAG ATACTTTAGCCAATATAAATTAAAAACCAGCCTGAGTTTACATAAATTTGTAAAGTCAGGCTCTTCTAAAATCCAAAGAGGGTTTTTGCC TATATATCAATCAGAGGATAAATACTTTAATAAAAGGTAATCACAGCTAAGTGGATACCTGTGTCTCAAATTACATATGCAAATGATCCA TCAGTAGGGATCACTAATAATAGTTTTCCTTTTAAAAAATAATTTCAGGGCAGGTACAGTGGCTCAAGCCTATACTTCCAGGACTTTGGG AGGCCAAGCAGAAGGATTGTGGGAGGCCAAGCAGAAGGATTGTTTGAGCCCAGAAATTCAAGGCTGCAGTGAGCTATGATCAATCCACTG TACTCCAGCCTAGGCTACAGAGTGAGATCCTTTCTCTAAAATAAAATACAATTTCCATGTATCCATAGGAATATATTCATCTTTTACAGT GATTGCAGATTAGTTTTAAAACGTCTTTTTCGTAATTCGTCAATGCAAGTTAGTAAGAACCAGATAATTTTCCATTTTAAAATGATAGGA ATCTAAAACTCTTTTTCAAAAATGCCAACCTGTTTTTCCGGCATCATAGTAGTTGGAATAATACAGATATAATTGACTAATCATAAAGTA CATGAGAGTACAGAAGGGAAATTTGGAAACGGTAAGTCTGCTAGGGCATTACAATCCTGTCCTAGCACTCCACCTTTATTCTGCCAACCT GGGTTAATTAAAGATGGTAGCCTGGAAAGTAATGAATGACATTGACTTCAGGCAATCTTTCCACTGATTATTCTTGGCTGAACTTCATTT ATCGAGTCAGAGAATGCACTGCCTGAGAAATGTCCCAGAGGAGTGAATCCTAGGCCTGGCCACAGTAGAATCGCCTGGAGAATTTAAGAA AAAAATTGTTGGGCACTCACTCTTTCCAGTGATCTTTATTTAGTTGGCTTACAATGGAATACAGGTATGGTTCATGTTTTTAAATTTGTC CAGGTGTTTCTATTGTGCAGTCACAGTTGAAAACCATTGTCTTCGAGAATAGCTATTCTATCTTGCCAGTTACAATAAGTGGATAGCTAT ATTTTCACATAAATTATAGTTTACAGATGTTTGGAGGGGGAAGACAGGATCTGAGGTGTTTTGATATGACTGTTAGCACCAAAATCTGAA >In-frame_HMGXB3_ENST00000503427_chr5_149386210_+_PAM_ENST00000346918_chr5_102237060_+_3806nt ATGAGAGGGAAAGACTGAGACAGGCTGAGGTCAGGCCTTGAACGTCGTGCTGAGGAGAGGGTGGTATTGTAGGCTTCCCAGCGCCCGACG TGGCTCTGAAAGGTGAGGCGGGGCCTAGATCCCTCACGCTCAGCACAGCCCCGCCCCTGTTACCTGAACGCCCCACAGCAGTGCCCGGGG GCTGAGCGGCCGGGGCGTCCCACCGCCGGCAGCCACAGCTTCCTCCTCCGCCCGGGACCTCTGGCCGGAAGCAGTCCGTTCGCCTTACTA GACCCGCTCCAAGCCTTTGAGCAGTTCGTGTGGGTCCGCTCCCAAGCTAGGGCTGGGCTGTTGCGCTTGCGCCAGGGGTCGCATGCAGTC ACGCGCTGCCGACCGCTTCCGGTGCGCCGCGAGGGCCGCCGGGACGGGTCTCCCTGGCGATCCGTGGTGTGCCGCTACTGCCGGTGCAGC CGCCAAACCGGTGCCTCGGTGACGACCGTGTCCCTGCCGTCTTCCTCGAGCTCCCCGGGGCTTGACCCCCGGGGCCCTCGGCAGGCATCG GTGAGGAGCCTGCGGAGCGAACCTGTGCTCCTATTCTTGCCCTTCAGGACCCCATATCGCGACTCCGAGGAGGGGAAGCGAGAGGGGCTG TCGCGACTCCGCGCCGTGTGTCGCCGGGCGGGGCCGCGGGGCCGGGGCTCCTTCAGCCCCCGGGATGCGCGCGCGAGCCCTCGCCTCCAC TTCCTTGTTGCTGCTGTCACGACTGGAGCCGCCTCTCGCCGACAGCGGGGAGCGCGAGTGCGCCAGCCATCCCCCTCGTCCAGCCGCCGG GCCAAGCGCCTCCGGGAATGTGAGCGGCGCAGCTTGCACGCTCCTCCGGCCATGGACGCATCATATGATGGTACTGAGGTAACTGTCGTG ATGGAGGAAATTGAGGAAGCCTATTGTTACACCTCTCCTGGGCCACCCAAGAAGAAGAAAAAGTATAAAATACATGGAGAAAAGACAAAG AAACCCAGGTCTGCTTACCTTCTGTACTATTACGACATCTACCTGAAAGTGCAGCAGGAGCTCCCCCACCTCCCTCAGTCTGAGATCAAT AAGAAGATTAGTGAGAGTTGGAGGCTTCTCAGCGTGGCCGAGAGGAGTTACTACTTGGAGAAAGCCAAACTAGAGAAGGAAGGTTTGGAT CCTTCCGATACATACTTCTGCATGTCTATGCGAATACCAGTGGATGAGGAAGCCTTCGTGATTGACTTCAAGCCTCGAGCCAGCATGGAT ACTGTCCATCACATGTTACTTTTTGGATGCAATATGCCTTCATCCACTGGAAGTTACTGGTTTTGTGATGAAGGAACCTGTACAGATAAA GCCAATATTCTGTATGCCTGGGCGAGAAATGCTCCCCCTACCCGGCTCCCCAAAGGTGTTGGATTCAGAGTTGGAGGAGAGACTGGAAGT AAATACTTTGTACTACAGGTACACTATGGGGATATTAGTGCTTTTAGAGATAATAACAAGGACTGTTCTGGTGTGTCCTTACACCTCACA CGTCTGCCACAGCCTTTAATTGCTGGCATGTACCTTATGATGTCTGTTGACACTGTTATCCCAGCAGGAGAAAAAGTGGTGAATTCTGAC ATTTCATGCCATTATAAAAATTATCCAATGCATGTCTTTGCCTATAGAGTTCACACTCACCATTTAGGTAAGGTAGTAAGTGGATACAGA GTAAGAAATGGACAGTGGACACTGATTGGACGGCAGAGCCCTCAGCTGCCACAGGCTTTCTACCCTGTGGGGCATCCAGTTGATGTAAGT TTTGGTGACCTACTGGCTGCAAGATGTGTATTCACTGGTGAAGGAAGGACAGAAGCCACACACATTGGTGGCACGTCTAGTGATGAAATG TGCAACTTATACATTATGTATTACATGGAAGCCAAGCATGCAGTTTCTTTCATGACCTGTACCCAGAATGTAGCTCCAGATATGTTCAGA ACCATACCACCAGAGGCCAACATTCCAATTCCCGTGAAGTCTGATATGGTTATGATGCATGAACATCATAAAGAAACAGAATATAAAGAT AAGATTCCTTTACTACAGCAGCCAAAACGAGAAGAAGAAGAAGTGTTAGACCAGGGTGATTTCTATTCACTACTTTCCAAGCTGCTAGGA GAAAGGGAAGATGTTGTTCATGTGCACAAATATAATCCTACAGAAAAGGCAGAATCAGAGTCAGACCTGGTAGCTGAGATTGCAAATGTA GTCCAAAAAAAGGATCTTGGTCGATCTGATGCCAGAGAGGGTGCAGAACATGAGAGGGGTAATGCTATTCTTGTCAGAGACAGAATTCAC AAATTCCACAGACTAGTATCTACCTTGAGGCCACCAGAGAGCAGAGTTTTCTCATTACAGCAGCCCCCACCTGGTGAAGGCACCTGGGAA CCAGAACACACAGGAGATTTCCACATGGAAGAGGCACTGGATTGGCCTGGAGTATACTTGTTACCAGGCCAGGTTTCTGGGGTGGCTCTA GACCCTAAGAATAACCTGGTGATTTTCCACAGAGGTGACCATGTCTGGGATGGAAACTCGTTTGACAGCAAGTTTGTTTACCAGCAAATA GGACTCGGACCAATTGAAGAAGACACTATTCTTGTCATAGATCCAAATAATGCTGCAGTACTCCAGTCCAGTGGAAAAAATCTGTTTTAC TTGCCACATGGCTTGAGTATAGATAAAGATGGGAATTATTGGGTCACAGACGTGGCTCTCCATCAGGTGTTCAAACTGGATCCAAACAAT AAAGAAGGCCCTGTATTAATCCTGGGAAGGAGCATGCAACCAGGCAGTGACCAGAATCACTTCTGTCAACCCACTGATGTGGCTGTGGAT CCAGGCACTGGAGCCATTTATGTATCAGATGGTTACTGCAACAGCAGGATTGTGCAGTTTTCACCAAGTGGAAAGTTCATCACACAGTGG GGAGAAGAGTCTTCAGGGAGCAGTCCTCTGCCAGGCCAGTTCACTGTTCCTCACAGCTTGGCTCTTGTGCCTCTTTTGGGCCAATTATGT GTGGCAGACCGGGAAAATGGTCGGATCCAGTGTTTTAAAACTGACACCAAAGAATTTGTGAGAGAGATTAAGCATTCATCATTTGGAAGA AATGTATTTGCAATTTCATATATACCAGGCTTGCTCTTTGCAGTGAATGGGAAGCCTCATTTTGGGGACCAAGAACCTGTACAAGGATTT GTGATGAACTTTTCCAATGGGGAAATTATAGACATCTTCAAGCCAGTGCGCAAGCACTTTGATATGCCTCATGATATTGTTGCATCTGAA GATGGGACTGTGTACATTGGAGATGCTCATACCAACACCGTGTGGAAGTTCACCTTGACTGAGAAATTGGAACATCGATCAGTTAAAAAG GCTGGCATTGAGGTCCAGGAAATCAAAGGAAAGGGAAGTGGAGGCTTAAACCTTGGTAATTTCTTTGCAAGCCGTAAGGGCTACAGTCGA AAAGGGTTTGACCGGCTTAGCACTGAGGGCAGTGACCAAGAGAAAGAGGATGATGGAAGTGAATCAGAAGAGGAGTATTCAGCACCTCTG CCTGCGCTCGCACCTTCCTCCTCCTGAAAACCAAGCTTTGATTTAGATTGAGTAAGATTTACCCAGAATGTCAGATTCCTTTCCCTTTAG CACGTTTAAAGTTCTGTGTATTTAATTGTAAACTGTACTAGTCTGTGTGGGACTGTACACACTTTATTTACTTCGTTTTGGTTAAGTTGG >In-frame_HMGXB3_ENST00000502717_chr5_149386210_+_PAM_ENST00000438793_chr5_102237060_+_5528nt GCCGGGACGGGTCTCCCTGGCGATCCGTGGTGTGCCGCTACTGCCGGTGCAGCCGCCAAACCGGTGCCTCGGTGACGACCGTGTCCCTGC CGTCTTCCTCGAGCTCCCCGGGGCTTGACCCCCGGGGCCCTCGGCAGGCATCGGTGAGGAGCCTGCGGAGCGAACCTGTGCTCCTATTCT TGCCCTTCAGGACCCCATATCGCGACTCCGAGGAGGGGAAGCGAGAGGGGCTGTCGCGACTCCGCGCCGTGTGTCGCCGGGCGGGGCCGC GGGGCCGGGGCTCCTTCAGCCCCCGGGATGCGCGCGCGAGCCCTCGCCTCCACTTCCTTGTTGCTGCTGTCACGACTGGAGCCGCCTCTC GCCGACAGCGGGGAGCGCGAGTGCGCCAGCCATCCCCCTCGTCCAGCCGCCGGGCCAAGCGCCTCCGGGAATGTGAGCGGCGCAGCTTGC ACGCTCCTCCGGCCATGGACGCATCATATGATGGTACTGAGGTAACTGTCGTGATGGAGGAAATTGAGGAAGCCTATTGTTACACCTCTC CTGGGCCACCCAAGAAGAAGAAAAAGTATAAAATACATGGAGAAAAGACAAAGAAACCCAGGTCTGCTTACCTTCTGTACTATTACGACA TCTACCTGAAAGTGCAGCAGGAGCTCCCCCACCTCCCTCAGTCTGAGATCAATAAGAAGATTAGTGAGAGTTGGAGGCTTCTCAGCGTGG CCGAGAGGAGTTACTACTTGGAGAAAGCCAAACTAGAGAAGGAAGGTTTGGATCCTTCCGATACATACTTCTGCATGTCTATGCGAATAC CAGTGGATGAGGAAGCCTTCGTGATTGACTTCAAGCCTCGAGCCAGCATGGATACTGTCCATCACATGTTACTTTTTGGATGCAATATGC CTTCATCCACTGGAAGTTACTGGTTTTGTGATGAAGGAACCTGTACAGATAAAGCCAATATTCTGTATGCCTGGGCGAGAAATGCTCCCC CTACCCGGCTCCCCAAAGGTGTTGGATTCAGAGTTGGAGGAGAGACTGGAAGTAAATACTTTGTACTACAGGTACACTATGGGGATATTA GTGCTTTTAGAGATAATAACAAGGACTGTTCTGGTGTGTCCTTACACCTCACACGTCTGCCACAGCCTTTAATTGCTGGCATGTACCTTA TGATGTCTGTTGACACTGTTATCCCAGCAGGAGAAAAAGTGGTGAATTCTGACATTTCATGCCATTATAAAAATTATCCAATGCATGTCT TTGCCTATAGAGTTCACACTCACCATTTAGGTAAGGTAGTAAGTGGATACAGAGTAAGAAATGGACAGTGGACACTGATTGGACGGCAGA GCCCTCAGCTGCCACAGGCTTTCTACCCTGTGGGGCATCCAGTTGATGTAAGTTTTGGTGACCTACTGGCTGCAAGATGTGTATTCACTG GTGAAGGAAGGACAGAAGCCACACACATTGGTGGCACGTCTAGTGATGAAATGTGCAACTTATACATTATGTATTACATGGAAGCCAAGC ATGCAGTTTCTTTCATGACCTGTACCCAGAATGTAGCTCCAGATATGTTCAGAACCATACCACCAGAGGCCAACATTCCAATTCCCGTGA AGTCTGATATGGTTATGATGCATGAACATCATAAAGAAACAGAATATAAAGATAAGATTCCTTTACTACAGCAGCCAAAACGAGAAGAAG AAGAAGTGTTAGACCAGGGTGATTTCTATTCACTACTTTCCAAGCTGCTAGGAGAAAGGGAAGATGTTGTTCATGTGCACAAATATAATC CTACAGAAAAGGCAGAATCAGAGTCAGACCTGGTAGCTGAGATTGCAAATGTAGTCCAAAAAAAGGATCTTGGTCGATCTGATGCCAGAG AGGGTGCAGAACATGAGAGGGGTAATGCTATTCTTGTCAGAGACAGAATTCACAAATTCCACAGACTAGTATCTACCTTGAGGCCACCAG AGAGCAGAGTTTTCTCATTACAGCAGCCCCCACCTGGTGAAGGCACCTGGGAACCAGAACACACAGGAGATTTCCACATGGAAGAGGCAC TGGATTGGCCTGGAGTATACTTGTTACCAGGCCAGGTTTCTGGGGTGGCTCTAGACCCTAAGAATAACCTGGTGATTTTCCACAGAGGTG ACCATGTCTGGGATGGAAACTCGTTTGACAGCAAGTTTGTTTACCAGCAAATAGGACTCGGACCAATTGAAGAAGACACTATTCTTGTCA TAGATCCAAATAATGCTGCAGTACTCCAGTCCAGTGGAAAAAATCTGTTTTACTTGCCACATGGCTTGAGTATAGATAAAGATGGGAATT ATTGGGTCACAGACGTGGCTCTCCATCAGGTGTTCAAACTGGATCCAAACAATAAAGAAGGCCCTGTATTAATCCTGGGAAGGAGCATGC AACCAGGCAGTGACCAGAATCACTTCTGTCAACCCACTGATGTGGCTGTGGATCCAGGCACTGGAGCCATTTATGTATCAGATGGTTACT GCAACAGCAGGATTGTGCAGTTTTCACCAAGTGGAAAGTTCATCACACAGTGGGGAGAAGAGTCTTCAGGGAGCAGTCCTCTGCCAGGCC AGTTCACTGTTCCTCACAGCTTGGCTCTTGTGCCTCTTTTGGGCCAATTATGTGTGGCAGACCGGGAAAATGGTCGGATCCAGTGTTTTA AAACTGACACCAAAGAATTTGTGAGAGAGATTAAGCATTCATCATTTGGAAGAAATGTATTTGCAATTTCATATATACCAGGCTTGCTCT TTGCAGTGAATGGGAAGCCTCATTTTGGGGACCAAGAACCTGTACAAGGATTTGTGATGAACTTTTCCAATGGGGAAATTATAGACATCT TCAAGCCAGTGCGCAAGCACTTTGATATGCCTCATGATATTGTTGCATCTGAAGATGGGACTGTGTACATTGGAGATGCTCATACCAACA CCGTGTGGAAGTTCACCTTGACTGAGAAATTGGAACATCGATCAGTTAAAAAGGCTGGCATTGAGGTCCAGGAAATCAAAGAAGCCGAGG CAGTTGTTGAAACCAAAATGGAGAACAAACCCACCTCCTCAGAATTGCAGAAGATGCAAGAGAAACAGAAACTGATCAAAGAGCCAGGCT CGGGAGTGCCTGTTGTTCTCATTACAACCCTTCTGGTTATTCCGGTGGTTGTCCTGCTGGCCATTGCCATATTTATTCGGTGGAAAAAAT CAAGGGCCTTTGGAGATTCTGAACACAAACTCGAGACGAGTTCAGGAAGAGTACTGGGAAGATTTAGAGGAAAGGGAAGTGGAGGCTTAA ACCTTGGTAATTTCTTTGCAAGCCGTAAGGGCTACAGTCGAAAAGGGTTTGACCGGCTTAGCACTGAGGGCAGTGACCAAGAGAAAGAGG ATGATGGAAGTGAATCAGAAGAGGAGTATTCAGCACCTCTGCCTGCGCTCGCACCTTCCTCCTCCTGAAAACCAAGCTTTGATTTAGATT GAGTAAGATTTACCCAGAATGTCAGATTCCTTTCCCTTTAGCACGTTTAAAGTTCTGTGTATTTAATTGTAAACTGTACTAGTCTGTGTG GGACTGTACACACTTTATTTACTTCGTTTTGGTTAAGTTGGCTTCTGTTTCTAGTTGAGGAGTTTCCTAAAAGTTCATAACAGTGCCATT GTCTTTATATGAACATAGACTAGAGAAACCGTCCTCTTTTTCCATCATAATTCTAATCTAACAATGGAAGATTTGCCCATTTACACTTTT GAGACTTTTTGGTGGATGTAAATAACCCCATTCTTTGCTTGAACACAGTATTTTCCCAATAGCACTTTCATTGCCAGTGTCTTTCTTTGG TGCCTTTCCTGTTCAGCATTCTTAGCCTGTGGCAGTAAAGAGAAACTTTGTGCTACATGACGACAAAGCTGCTAAATCTCCTATTTTTTT AAAATCACTAACATTATATTGCAATGAAGGAAATAAAAAAGTCTCTATTTAAATTCTTTTTTAAATTTTCTTCAGTTGGTGTGTTTTTGG GATGTCTTATTTTTAGATGGTTACACTGTTAGAACACTATTTTCAGAATCTGAATGTAATTTGTGTAATAAAGTGTTTTCAGAGCATTAG CTGTCAGTGTATTTTCCAGTTTTTGCGTATTTGCAGATTTTACATACAACTTTTATAATAATTACACAAACCCACAAATATTAGTGAAAC TTACTCGATGTCTTCAACTAAAAGAAATGTGTGTATTGTACAAAATTTAGAAGATACTTTAGCCAATATAAATTAAAAACCAGCCTGAGT TTACATAAATTTGTAAAGTCAGGCTCTTCTAAAATCCAAAGAGGGTTTTTGCCTATATATCAATCAGAGGATAAATACTTTAATAAAAGG TAATCACAGCTAAGTGGATACCTGTGTCTCAAATTACATATGCAAATGATCCATCAGTAGGGATCACTAATAATAGTTTTCCTTTTAAAA AATAATTTCAGGGCAGGTACAGTGGCTCAAGCCTATACTTCCAGGACTTTGGGAGGCCAAGCAGAAGGATTGTGGGAGGCCAAGCAGAAG GATTGTTTGAGCCCAGAAATTCAAGGCTGCAGTGAGCTATGATCAATCCACTGTACTCCAGCCTAGGCTACAGAGTGAGATCCTTTCTCT AAAATAAAATACAATTTCCATGTATCCATAGGAATATATTCATCTTTTACAGTGATTGCAGATTAGTTTTAAAACGTCTTTTTCGTAATT CGTCAATGCAAGTTAGTAAGAACCAGATAATTTTCCATTTTAAAATGATAGGAATCTAAAACTCTTTTTCAAAAATGCCAACCTGTTTTT CCGGCATCATAGTAGTTGGAATAATACAGATATAATTGACTAATCATAAAGTACATGAGAGTACAGAAGGGAAATTTGGAAACGGTAAGT CTGCTAGGGCATTACAATCCTGTCCTAGCACTCCACCTTTATTCTGCCAACCTGGGTTAATTAAAGATGGTAGCCTGGAAAGTAATGAAT GACATTGACTTCAGGCAATCTTTCCACTGATTATTCTTGGCTGAACTTCATTTATCGAGTCAGAGAATGCACTGCCTGAGAAATGTCCCA GAGGAGTGAATCCTAGGCCTGGCCACAGTAGAATCGCCTGGAGAATTTAAGAAAAAAATTGTTGGGCACTCACTCTTTCCAGTGATCTTT ATTTAGTTGGCTTACAATGGAATACAGGTATGGTTCATGTTTTTAAATTTGTCCAGGTGTTTCTATTGTGCAGTCACAGTTGAAAACCAT TGTCTTCGAGAATAGCTATTCTATCTTGCCAGTTACAATAAGTGGATAGCTATATTTTCACATAAATTATAGTTTACAGATGTTTGGAGG GGGAAGACAGGATCTGAGGTGTTTTGATATGACTGTTAGCACCAAAATCTGAATGCCTTAATTGTTGAATGTGTTAAATTGGATAATTAA >In-frame_HMGXB3_ENST00000502717_chr5_149386210_+_PAM_ENST00000346918_chr5_102237060_+_3409nt GCCGGGACGGGTCTCCCTGGCGATCCGTGGTGTGCCGCTACTGCCGGTGCAGCCGCCAAACCGGTGCCTCGGTGACGACCGTGTCCCTGC CGTCTTCCTCGAGCTCCCCGGGGCTTGACCCCCGGGGCCCTCGGCAGGCATCGGTGAGGAGCCTGCGGAGCGAACCTGTGCTCCTATTCT TGCCCTTCAGGACCCCATATCGCGACTCCGAGGAGGGGAAGCGAGAGGGGCTGTCGCGACTCCGCGCCGTGTGTCGCCGGGCGGGGCCGC GGGGCCGGGGCTCCTTCAGCCCCCGGGATGCGCGCGCGAGCCCTCGCCTCCACTTCCTTGTTGCTGCTGTCACGACTGGAGCCGCCTCTC GCCGACAGCGGGGAGCGCGAGTGCGCCAGCCATCCCCCTCGTCCAGCCGCCGGGCCAAGCGCCTCCGGGAATGTGAGCGGCGCAGCTTGC ACGCTCCTCCGGCCATGGACGCATCATATGATGGTACTGAGGTAACTGTCGTGATGGAGGAAATTGAGGAAGCCTATTGTTACACCTCTC CTGGGCCACCCAAGAAGAAGAAAAAGTATAAAATACATGGAGAAAAGACAAAGAAACCCAGGTCTGCTTACCTTCTGTACTATTACGACA TCTACCTGAAAGTGCAGCAGGAGCTCCCCCACCTCCCTCAGTCTGAGATCAATAAGAAGATTAGTGAGAGTTGGAGGCTTCTCAGCGTGG CCGAGAGGAGTTACTACTTGGAGAAAGCCAAACTAGAGAAGGAAGGTTTGGATCCTTCCGATACATACTTCTGCATGTCTATGCGAATAC CAGTGGATGAGGAAGCCTTCGTGATTGACTTCAAGCCTCGAGCCAGCATGGATACTGTCCATCACATGTTACTTTTTGGATGCAATATGC CTTCATCCACTGGAAGTTACTGGTTTTGTGATGAAGGAACCTGTACAGATAAAGCCAATATTCTGTATGCCTGGGCGAGAAATGCTCCCC CTACCCGGCTCCCCAAAGGTGTTGGATTCAGAGTTGGAGGAGAGACTGGAAGTAAATACTTTGTACTACAGGTACACTATGGGGATATTA GTGCTTTTAGAGATAATAACAAGGACTGTTCTGGTGTGTCCTTACACCTCACACGTCTGCCACAGCCTTTAATTGCTGGCATGTACCTTA TGATGTCTGTTGACACTGTTATCCCAGCAGGAGAAAAAGTGGTGAATTCTGACATTTCATGCCATTATAAAAATTATCCAATGCATGTCT TTGCCTATAGAGTTCACACTCACCATTTAGGTAAGGTAGTAAGTGGATACAGAGTAAGAAATGGACAGTGGACACTGATTGGACGGCAGA GCCCTCAGCTGCCACAGGCTTTCTACCCTGTGGGGCATCCAGTTGATGTAAGTTTTGGTGACCTACTGGCTGCAAGATGTGTATTCACTG GTGAAGGAAGGACAGAAGCCACACACATTGGTGGCACGTCTAGTGATGAAATGTGCAACTTATACATTATGTATTACATGGAAGCCAAGC ATGCAGTTTCTTTCATGACCTGTACCCAGAATGTAGCTCCAGATATGTTCAGAACCATACCACCAGAGGCCAACATTCCAATTCCCGTGA AGTCTGATATGGTTATGATGCATGAACATCATAAAGAAACAGAATATAAAGATAAGATTCCTTTACTACAGCAGCCAAAACGAGAAGAAG AAGAAGTGTTAGACCAGGGTGATTTCTATTCACTACTTTCCAAGCTGCTAGGAGAAAGGGAAGATGTTGTTCATGTGCACAAATATAATC CTACAGAAAAGGCAGAATCAGAGTCAGACCTGGTAGCTGAGATTGCAAATGTAGTCCAAAAAAAGGATCTTGGTCGATCTGATGCCAGAG AGGGTGCAGAACATGAGAGGGGTAATGCTATTCTTGTCAGAGACAGAATTCACAAATTCCACAGACTAGTATCTACCTTGAGGCCACCAG AGAGCAGAGTTTTCTCATTACAGCAGCCCCCACCTGGTGAAGGCACCTGGGAACCAGAACACACAGGAGATTTCCACATGGAAGAGGCAC TGGATTGGCCTGGAGTATACTTGTTACCAGGCCAGGTTTCTGGGGTGGCTCTAGACCCTAAGAATAACCTGGTGATTTTCCACAGAGGTG ACCATGTCTGGGATGGAAACTCGTTTGACAGCAAGTTTGTTTACCAGCAAATAGGACTCGGACCAATTGAAGAAGACACTATTCTTGTCA TAGATCCAAATAATGCTGCAGTACTCCAGTCCAGTGGAAAAAATCTGTTTTACTTGCCACATGGCTTGAGTATAGATAAAGATGGGAATT ATTGGGTCACAGACGTGGCTCTCCATCAGGTGTTCAAACTGGATCCAAACAATAAAGAAGGCCCTGTATTAATCCTGGGAAGGAGCATGC AACCAGGCAGTGACCAGAATCACTTCTGTCAACCCACTGATGTGGCTGTGGATCCAGGCACTGGAGCCATTTATGTATCAGATGGTTACT GCAACAGCAGGATTGTGCAGTTTTCACCAAGTGGAAAGTTCATCACACAGTGGGGAGAAGAGTCTTCAGGGAGCAGTCCTCTGCCAGGCC AGTTCACTGTTCCTCACAGCTTGGCTCTTGTGCCTCTTTTGGGCCAATTATGTGTGGCAGACCGGGAAAATGGTCGGATCCAGTGTTTTA AAACTGACACCAAAGAATTTGTGAGAGAGATTAAGCATTCATCATTTGGAAGAAATGTATTTGCAATTTCATATATACCAGGCTTGCTCT TTGCAGTGAATGGGAAGCCTCATTTTGGGGACCAAGAACCTGTACAAGGATTTGTGATGAACTTTTCCAATGGGGAAATTATAGACATCT TCAAGCCAGTGCGCAAGCACTTTGATATGCCTCATGATATTGTTGCATCTGAAGATGGGACTGTGTACATTGGAGATGCTCATACCAACA CCGTGTGGAAGTTCACCTTGACTGAGAAATTGGAACATCGATCAGTTAAAAAGGCTGGCATTGAGGTCCAGGAAATCAAAGGAAAGGGAA GTGGAGGCTTAAACCTTGGTAATTTCTTTGCAAGCCGTAAGGGCTACAGTCGAAAAGGGTTTGACCGGCTTAGCACTGAGGGCAGTGACC AAGAGAAAGAGGATGATGGAAGTGAATCAGAAGAGGAGTATTCAGCACCTCTGCCTGCGCTCGCACCTTCCTCCTCCTGAAAACCAAGCT TTGATTTAGATTGAGTAAGATTTACCCAGAATGTCAGATTCCTTTCCCTTTAGCACGTTTAAAGTTCTGTGTATTTAATTGTAAACTGTA |
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FusionGenePPI for HMGXB3_PAM |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
HMGXB3 | TK1, CDKN1A, CDK4, SMN1, ANXA7, PFDN1 | PAM | KALRN, TSC2, TSC1, RASSF9, CALM1, TAZ, SUSD4, IDS, SERPINA6, TMEM25, ART3, B3GNT2, PTCH1, DPEP2, UBR2, GLP1R, RALB, DKKL1, GAA |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
Tgene | PAM | chr5:149386210 | chr5:102237060 | ENST00000304400 | + | 1 | 25 | 925_942 | 70 | 975 | RASSF9 |
Tgene | PAM | chr5:149386210 | chr5:102237060 | ENST00000346918 | + | 1 | 23 | 925_942 | 70 | 888 | RASSF9 |
Tgene | PAM | chr5:149386210 | chr5:102237060 | ENST00000348126 | + | 1 | 24 | 925_942 | 70 | 867 | RASSF9 |
Tgene | PAM | chr5:149386210 | chr5:102237060 | ENST00000438793 | + | 1 | 25 | 925_942 | 70 | 974 | RASSF9 |
Tgene | PAM | chr5:149386210 | chr5:102237060 | ENST00000455264 | + | 1 | 24 | 925_942 | 70 | 906 | RASSF9 |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for HMGXB3_PAM |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Tgene | PAM | P19021 | DB00126 | Vitamin C | Peptidyl-glycine alpha-amidating monooxygenase | small molecule | approved|nutraceutical |
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RelatedDiseases for HMGXB3_PAM |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Tgene | PAM | C0003469 | Anxiety Disorders | 1 | CTD_human |
Tgene | PAM | C0011860 | Diabetes Mellitus, Non-Insulin-Dependent | 1 | CTD_human |
Tgene | PAM | C0036572 | Seizures | 1 | CTD_human |