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Fusion gene ID: 15908 |
FusionGeneSummary for HCN1_SPEF2 |
Fusion gene summary |
Fusion gene information | Fusion gene name: HCN1_SPEF2 | Fusion gene ID: 15908 | Hgene | Tgene | Gene symbol | HCN1 | SPEF2 | Gene ID | 348980 | 79925 |
Gene name | hyperpolarization activated cyclic nucleotide gated potassium channel 1 | sperm flagellar 2 | |
Synonyms | BCNG-1|BCNG1|EIEE24|HAC-2 | CT122|KPL2 | |
Cytomap | 5p12 | 5p13.2 | |
Type of gene | protein-coding | protein-coding | |
Description | potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1brain cyclic nucleotide-gated channel 1 | sperm flagellar protein 2cancer/testis antigen 122testis tissue sperm-binding protein Li 47a | |
Modification date | 20180522 | 20180519 | |
UniProtAcc | O60741 | Q9C093 | |
Ensembl transtripts involved in fusion gene | ENST00000303230, | ENST00000282469, ENST00000509059, ENST00000356031, ENST00000440995, ENST00000303129, | |
Fusion gene scores | * DoF score | 2 X 2 X 2=8 | 7 X 9 X 11=693 |
# samples | 2 | 13 | |
** MAII score | log2(2/8*10)=1.32192809488736 | log2(13/693*10)=-2.41434372910876 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: HCN1 [Title/Abstract] AND SPEF2 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | HCN1 | GO:0051289 | protein homotetramerization | 28086084 |
Hgene | HCN1 | GO:0071320 | cellular response to cAMP | 22748890 |
Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | RV | SKCM | TCGA-D3-A1Q3-06A | HCN1 | chr5 | 45645287 | - | SPEF2 | chr5 | 35667174 | + |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000303230 | ENST00000282469 | HCN1 | chr5 | 45645287 | - | SPEF2 | chr5 | 35667174 | + |
In-frame | ENST00000303230 | ENST00000509059 | HCN1 | chr5 | 45645287 | - | SPEF2 | chr5 | 35667174 | + |
In-frame | ENST00000303230 | ENST00000356031 | HCN1 | chr5 | 45645287 | - | SPEF2 | chr5 | 35667174 | + |
In-frame | ENST00000303230 | ENST00000440995 | HCN1 | chr5 | 45645287 | - | SPEF2 | chr5 | 35667174 | + |
5CDS-intron | ENST00000303230 | ENST00000303129 | HCN1 | chr5 | 45645287 | - | SPEF2 | chr5 | 35667174 | + |
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FusionProtFeatures for HCN1_SPEF2 |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
HCN1 | SPEF2 |
Hyperpolarization-activated ion channel exhibiting weakselectivity for potassium over sodium ions (PubMed:28086084).Contributes to the native pacemaker currents in heart (If) and inneurons (Ih). May mediate responses to sour stimuli.{ECO:0000269|PubMed:15351778, ECO:0000269|PubMed:28086084}. | Required for correct axoneme development. {ECO:0000250}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | HCN1 | chr5:45645287 | chr5:35667174 | ENST00000303230 | - | 2 | 8 | 1_80 | 283 | 891 | Compositional bias | Note=Gly-rich |
Hgene | HCN1 | chr5:45645287 | chr5:35667174 | ENST00000303230 | - | 2 | 8 | 1_93 | 283 | 891 | Region | Intrinsically disordered |
Hgene | HCN1 | chr5:45645287 | chr5:35667174 | ENST00000303230 | - | 2 | 8 | 165_173 | 283 | 891 | Topological domain | Extracellular |
Hgene | HCN1 | chr5:45645287 | chr5:35667174 | ENST00000303230 | - | 2 | 8 | 195_215 | 283 | 891 | Topological domain | Cytoplasmic |
Hgene | HCN1 | chr5:45645287 | chr5:35667174 | ENST00000303230 | - | 2 | 8 | 1_142 | 283 | 891 | Topological domain | Cytoplasmic |
Hgene | HCN1 | chr5:45645287 | chr5:35667174 | ENST00000303230 | - | 2 | 8 | 237_260 | 283 | 891 | Topological domain | Extracellular |
Hgene | HCN1 | chr5:45645287 | chr5:35667174 | ENST00000303230 | - | 2 | 8 | 143_164 | 283 | 891 | Transmembrane | Helical%3B Name%3DSegment S1 |
Hgene | HCN1 | chr5:45645287 | chr5:35667174 | ENST00000303230 | - | 2 | 8 | 174_194 | 283 | 891 | Transmembrane | Helical%3B Name%3DSegment S2 |
Hgene | HCN1 | chr5:45645287 | chr5:35667174 | ENST00000303230 | - | 2 | 8 | 216_236 | 283 | 891 | Transmembrane | Helical%3B Name%3DSegment S3 |
Hgene | HCN1 | chr5:45645287 | chr5:35667174 | ENST00000303230 | - | 2 | 8 | 261_281 | 283 | 891 | Transmembrane | Helical%3B Voltage-sensor%3B Name%3DSegment S4 |
Tgene | >SPEF2 | chr5:45645287 | chr5:35667174 | ENST00000282469 | + | 7 | 10 | 1686_1712 | 389 | 515 | Coiled coil | Ontology_term=ECO:0000255 |
Tgene | >SPEF2 | chr5:45645287 | chr5:35667174 | ENST00000282469 | + | 7 | 10 | 732_758 | 389 | 515 | Coiled coil | Ontology_term=ECO:0000255 |
Tgene | >SPEF2 | chr5:45645287 | chr5:35667174 | ENST00000282469 | + | 7 | 10 | 871_909 | 389 | 515 | Coiled coil | Ontology_term=ECO:0000255 |
Tgene | >SPEF2 | chr5:45645287 | chr5:35667174 | ENST00000303129 | + | 0 | 13 | 1686_1712 | -75 | 620 | Coiled coil | Ontology_term=ECO:0000255 |
Tgene | >SPEF2 | chr5:45645287 | chr5:35667174 | ENST00000303129 | + | 0 | 13 | 227_260 | -75 | 620 | Coiled coil | Ontology_term=ECO:0000255 |
Tgene | >SPEF2 | chr5:45645287 | chr5:35667174 | ENST00000303129 | + | 0 | 13 | 321_396 | -75 | 620 | Coiled coil | Ontology_term=ECO:0000255 |
Tgene | >SPEF2 | chr5:45645287 | chr5:35667174 | ENST00000303129 | + | 0 | 13 | 732_758 | -75 | 620 | Coiled coil | Ontology_term=ECO:0000255 |
Tgene | >SPEF2 | chr5:45645287 | chr5:35667174 | ENST00000303129 | + | 0 | 13 | 871_909 | -75 | 620 | Coiled coil | Ontology_term=ECO:0000255 |
Tgene | >SPEF2 | chr5:45645287 | chr5:35667174 | ENST00000356031 | + | 7 | 37 | 1686_1712 | 389 | 1823 | Coiled coil | Ontology_term=ECO:0000255 |
Tgene | >SPEF2 | chr5:45645287 | chr5:35667174 | ENST00000356031 | + | 7 | 37 | 732_758 | 389 | 1823 | Coiled coil | Ontology_term=ECO:0000255 |
Tgene | >SPEF2 | chr5:45645287 | chr5:35667174 | ENST00000356031 | + | 7 | 37 | 871_909 | 389 | 1823 | Coiled coil | Ontology_term=ECO:0000255 |
Tgene | >SPEF2 | chr5:45645287 | chr5:35667174 | ENST00000440995 | + | 7 | 37 | 1686_1712 | 389 | 1819 | Coiled coil | Ontology_term=ECO:0000255 |
Tgene | >SPEF2 | chr5:45645287 | chr5:35667174 | ENST00000440995 | + | 7 | 37 | 732_758 | 389 | 1819 | Coiled coil | Ontology_term=ECO:0000255 |
Tgene | >SPEF2 | chr5:45645287 | chr5:35667174 | ENST00000440995 | + | 7 | 37 | 871_909 | 389 | 1819 | Coiled coil | Ontology_term=ECO:0000255 |
Tgene | >SPEF2 | chr5:45645287 | chr5:35667174 | ENST00000303129 | + | 0 | 13 | 1_105 | -75 | 620 | Domain | Calponin-homology (CH) |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | >HCN1 | chr5:45645287 | chr5:35667174 | ENST00000303230 | - | 2 | 8 | 726_756 | 283 | 891 | Compositional bias | Note=Gln-rich |
Hgene | >HCN1 | chr5:45645287 | chr5:35667174 | ENST00000303230 | - | 2 | 8 | 857_863 | 283 | 891 | Compositional bias | Note=Poly-Pro |
Hgene | >HCN1 | chr5:45645287 | chr5:35667174 | ENST00000303230 | - | 2 | 8 | 345_366 | 283 | 891 | Intramembrane | Pore-forming%3B Name%3DSegment H5 |
Hgene | >HCN1 | chr5:45645287 | chr5:35667174 | ENST00000303230 | - | 2 | 8 | 358_362 | 283 | 891 | Motif | Selectivity filter |
Hgene | >HCN1 | chr5:45645287 | chr5:35667174 | ENST00000303230 | - | 2 | 8 | 539_542 | 283 | 891 | Nucleotide binding | cAMP |
Hgene | >HCN1 | chr5:45645287 | chr5:35667174 | ENST00000303230 | - | 2 | 8 | 549_550 | 283 | 891 | Nucleotide binding | cAMP |
Hgene | >HCN1 | chr5:45645287 | chr5:35667174 | ENST00000303230 | - | 2 | 8 | 590_593 | 283 | 891 | Nucleotide binding | cAMP |
Hgene | >HCN1 | chr5:45645287 | chr5:35667174 | ENST00000303230 | - | 2 | 8 | 282_295 | 283 | 891 | Topological domain | Cytoplasmic |
Hgene | >HCN1 | chr5:45645287 | chr5:35667174 | ENST00000303230 | - | 2 | 8 | 319_344 | 283 | 891 | Topological domain | Extracellular |
Hgene | >HCN1 | chr5:45645287 | chr5:35667174 | ENST00000303230 | - | 2 | 8 | 367_371 | 283 | 891 | Topological domain | Extracellular |
Hgene | >HCN1 | chr5:45645287 | chr5:35667174 | ENST00000303230 | - | 2 | 8 | 393_890 | 283 | 891 | Topological domain | Cytoplasmic |
Hgene | >HCN1 | chr5:45645287 | chr5:35667174 | ENST00000303230 | - | 2 | 8 | 296_318 | 283 | 891 | Transmembrane | Helical%3B Name%3DSegment S5 |
Hgene | >HCN1 | chr5:45645287 | chr5:35667174 | ENST00000303230 | - | 2 | 8 | 372_392 | 283 | 891 | Transmembrane | Helical%3B Name%3DSegment S6 |
Tgene | SPEF2 | chr5:45645287 | chr5:35667174 | ENST00000282469 | + | 7 | 10 | 227_260 | 389 | 515 | Coiled coil | Ontology_term=ECO:0000255 |
Tgene | SPEF2 | chr5:45645287 | chr5:35667174 | ENST00000282469 | + | 7 | 10 | 321_396 | 389 | 515 | Coiled coil | Ontology_term=ECO:0000255 |
Tgene | SPEF2 | chr5:45645287 | chr5:35667174 | ENST00000356031 | + | 7 | 37 | 227_260 | 389 | 1823 | Coiled coil | Ontology_term=ECO:0000255 |
Tgene | SPEF2 | chr5:45645287 | chr5:35667174 | ENST00000356031 | + | 7 | 37 | 321_396 | 389 | 1823 | Coiled coil | Ontology_term=ECO:0000255 |
Tgene | SPEF2 | chr5:45645287 | chr5:35667174 | ENST00000440995 | + | 7 | 37 | 227_260 | 389 | 1819 | Coiled coil | Ontology_term=ECO:0000255 |
Tgene | SPEF2 | chr5:45645287 | chr5:35667174 | ENST00000440995 | + | 7 | 37 | 321_396 | 389 | 1819 | Coiled coil | Ontology_term=ECO:0000255 |
Tgene | SPEF2 | chr5:45645287 | chr5:35667174 | ENST00000282469 | + | 7 | 10 | 1_105 | 389 | 515 | Domain | Calponin-homology (CH) |
Tgene | SPEF2 | chr5:45645287 | chr5:35667174 | ENST00000356031 | + | 7 | 37 | 1_105 | 389 | 1823 | Domain | Calponin-homology (CH) |
Tgene | SPEF2 | chr5:45645287 | chr5:35667174 | ENST00000440995 | + | 7 | 37 | 1_105 | 389 | 1819 | Domain | Calponin-homology (CH) |
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FusionGeneSequence for HCN1_SPEF2 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_HCN1_ENST00000303230_chr5_45645287_-_SPEF2_ENST00000282469_chr5_35667174_+_409aa MEGGGKPNSSSNSRDDGNSVFPAKASATGAGPAAAEKRLGTPPGGGGAGAKEHGNSVCFKVDGGGGGGGGGGGGEEPAGGFEDAEGPRRQ YGFMQRQFTSMLQPGVNKFSLRMFGSQKAVEKEQERVKTAGFWIIHPYSDFRFYWDLIMLIMMVGNLVIIPVGITFFTEQTTTPWIIFNV ASDTVFLLDLIMNFRTGTVNEDSSEIILDPKVIKMNYLKSWFVVDFISSIPVDYIFLIVEKGMDSEVYKTARALRIVRFTKILSLLRLLR LSRLIRYIHQWEEALAKQAKIDFEEQFLKEKRFHDQIAVERAQARYEKHYSVCAEILDQIVDLSTKVADYRMLTNNLIPYKLMHDWKELF >In-frame_HCN1_ENST00000303230_chr5_45645287_-_SPEF2_ENST00000509059_chr5_35667174_+_838aa MEGGGKPNSSSNSRDDGNSVFPAKASATGAGPAAAEKRLGTPPGGGGAGAKEHGNSVCFKVDGGGGGGGGGGGGEEPAGGFEDAEGPRRQ YGFMQRQFTSMLQPGVNKFSLRMFGSQKAVEKEQERVKTAGFWIIHPYSDFRFYWDLIMLIMMVGNLVIIPVGITFFTEQTTTPWIIFNV ASDTVFLLDLIMNFRTGTVNEDSSEIILDPKVIKMNYLKSWFVVDFISSIPVDYIFLIVEKGMDSEVYKTARALRIVRFTKILSLLRLLR LSRLIRYIHQWEEALAKQAKIDFEEQFLKEKRFHDQIAVERAQARYEKHYSVCAEILDQIVDLSTKVADYRMLTNNLIPYKLMHDWKELF FNAKPIYEQASVKTLPANPSREQLTELEKRDLLDTNDYEEYKNMVGEWALPEEMVDNLPPSNNCILGHILHRLAEKSLPPRAESTTPELP SFAVKGCLLGKTLSGKTTILRSLQKDFPIQILSIDTLVQEAIQAFHDNEKVSEVLPIQKNDEEDALPVLQEEIKESQDPQHVFSAGPVSD EVLPETEGANADKTPKAEEVKSSDSFLKLTTRAQLGAKSEQLLKKGKSIPDVLLVDIIVNAINEIPVNQDCILDGFPMTLNQAQLLEEAL TGCNRNLTEVERKKAQKSTLAIDPATSKEIPLPSPAFDFVILLDVSDTSSMSRMNDIIAEELSYKTAHEDISQRVAAENQDKDGDQNLRD QIQHRIIGFLDNWPLLEQWFSEPENILIKINAEIDKESLCEKVKEILTTEIAKKKNKVEKKLEEKEAEKKAAASLAELPLPTPPPAPPPE >In-frame_HCN1_ENST00000303230_chr5_45645287_-_SPEF2_ENST00000356031_chr5_35667174_+_1717aa MEGGGKPNSSSNSRDDGNSVFPAKASATGAGPAAAEKRLGTPPGGGGAGAKEHGNSVCFKVDGGGGGGGGGGGGEEPAGGFEDAEGPRRQ YGFMQRQFTSMLQPGVNKFSLRMFGSQKAVEKEQERVKTAGFWIIHPYSDFRFYWDLIMLIMMVGNLVIIPVGITFFTEQTTTPWIIFNV ASDTVFLLDLIMNFRTGTVNEDSSEIILDPKVIKMNYLKSWFVVDFISSIPVDYIFLIVEKGMDSEVYKTARALRIVRFTKILSLLRLLR LSRLIRYIHQWEEALAKQAKIDFEEQFLKEKRFHDQIAVERAQARYEKHYSVCAEILDQIVDLSTKVADYRMLTNNLIPYKLMHDWKELF FNAKPIYEQASVKTLPANPSREQLTELEKRDLLDTNDYEEYKNMVGEWALPEEMVDNLPPSNNCILGHILHRLAEKSLPPRAESTTPELP SFAVKGCLLGKTLSGKTTILRSLQKDFPIQILSIDTLVQEAIQAFHDNEKVSEVLPIQKNDEEDALPVLQEEIKESQDPQHVFSAGPVSD EVLPETEGETMLSANADKTPKAEEVKSSDSFLKLTTRAQLGAKSEQLLKKGKSIPDVLLVDIIVNAINEIPVNQDCILDGFPMTLNQAQL LEEALTGCNRNLTEVERKKAQKSTLAIDPATSKEIPLPSPAFDFVILLDVSDTSSMSRMNDIIAEELSYKTAHEDISQRVAAENQDKDGD QNLRDQIQHRIIGFLDNWPLLEQWFSEPENILIKINAEIDKESLCEKVKEILTTEIAKKKNKVEKKLEEKEAEKKAAASLAELPLPTPPP APPPEPEKEKEIHQSHVASKTPTAKGKPQSEAPHGKQESLQEGKGKKGETALKRKGSPKGKSSGGKVPVKKSPADSTDTSPVAIVPQPPK PGSEEWVYVNEPVPEEMPLFLVPYWELIENSYINTIKTVLRHLREDQHTVLAYLYEIRTSFQEFLKRPDHKQDFVAQWQADFNSLPDDLW DDEETKAELHQRVNDLRDRLWDICDARKEEAEQERLDIINESWLQDTLGMTMNHFFSLMQAELNRFQDTKRLLQDYYWGMESKIPVEDNK RFTRIPLVQLDSKDNSESQLRIPLVPRISISLETVTPKPKTKSVLKGKMDNSLENVESNFEADEKLVMDTWQQASLAVSHMVAAEIHQRL MEEEKENQPADPKEKSPQMGANKKVKKEPPKKKQEDKKPKGKSPPMAEATPVIVTTEEIAEIKRKNELRVKIKEEHLAALQFEEIATQFR LELIKTKALALLEDLVTKVVDVYKLMEKWLGERYLNEMASTEKLTDVARYHIETSTKIQNELYLSQEDFFINGNIKVFPDPPPSIRPPPV EKEEDGTLTIEQLDSLRDQFLDMAPKGIIGNKAFTDILIDLVTLNLGTNNFPSNWMHLTQPELQELTSLLTVNSEFVDWRKFLLVTSMPW PIPLEEELLETLQKFKAVDKEQLGTITFEQYMQAGLWFTGDEDIKIPENPLEPLPFNRQEHLIEFFFRLFADYEKDPPQLDYTQMLLYFA CHPDTVEGVYRALSVAVGTHVFQQVKASIPSAEKTSSTDAGPAEEFPEPEENAAREERKLKDDTEKREQKDEEIPENANNEKMSMETLLK VFKGGSEAQDSNRFASHLKIENIYAEGFIKTFQDLGAKNLEPIEVAVLLKHPFIQDLISNYSDYKFPDIKIILQRSEHVQGSDGERSPSR >In-frame_HCN1_ENST00000303230_chr5_45645287_-_SPEF2_ENST00000440995_chr5_35667174_+_1713aa MEGGGKPNSSSNSRDDGNSVFPAKASATGAGPAAAEKRLGTPPGGGGAGAKEHGNSVCFKVDGGGGGGGGGGGGEEPAGGFEDAEGPRRQ YGFMQRQFTSMLQPGVNKFSLRMFGSQKAVEKEQERVKTAGFWIIHPYSDFRFYWDLIMLIMMVGNLVIIPVGITFFTEQTTTPWIIFNV ASDTVFLLDLIMNFRTGTVNEDSSEIILDPKVIKMNYLKSWFVVDFISSIPVDYIFLIVEKGMDSEVYKTARALRIVRFTKILSLLRLLR LSRLIRYIHQWEEALAKQAKIDFEEQFLKEKRFHDQIAVERAQARYEKHYSVCAEILDQIVDLSTKVADYRMLTNNLIPYKLMHDWKELF FNAKPIYEQASVKTLPANPSREQLTELEKRDLLDTNDYEEYKNMVGEWALPEEMVDNLPPSNNCILGHILHRLAEKSLPPRAESTTPELP SFAVKGCLLGKTLSGKTTILRSLQKDFPIQILSIDTLVQEAIQAFHDNEKVSEVLPIQKNDEEDALPVLQEEIKESQDPQHVFSAGPVSD EVLPETEGANADKTPKAEEVKSSDSFLKLTTRAQLGAKSEQLLKKGKSIPDVLLVDIIVNAINEIPVNQDCILDGFPMTLNQAQLLEEAL TGCNRNLTEVERKKAQKSTLAIDPATSKEIPLPSPAFDFVILLDVSDTSSMSRMNDIIAEELSYKTAHEDISQRVAAENQDKDGDQNLRD QIQHRIIGFLDNWPLLEQWFSEPENILIKINAEIDKESLCEKVKEILTTEIAKKKNKVEKKLEEKEAEKKAAASLAELPLPTPPPAPPPE PEKEKEIHQSHVASKTPTAKGKPQSEAPHGKQESLQEGKGKKGETALKRKGSPKGKSSGGKVPVKKSPADSTDTSPVAIVPQPPKPGSEE WVYVNEPVPEEMPLFLVPYWELIENSYINTIKTVLRHLREDQHTVLAYLYEIRTSFQEFLKRPDHKQDFVAQWQADFNSLPDDLWDDEET KAELHQRVNDLRDRLWDICDARKEEAEQERLDIINESWLQDTLGMTMNHFFSLMQAELNRFQDTKRLLQDYYWGMESKIPVEDNKRFTRI PLVQLDSKDNSESQLRIPLVPRISISLETVTPKPKTKSVLKGKMDNSLENVESNFEADEKLVMDTWQQASLAVSHMVAAEIHQRLMEEEK ENQPADPKEKSPQMGANKKVKKEPPKKKQEDKKPKGKSPPMAEATPVIVTTEEIAEIKRKNELRVKIKEEHLAALQFEEIATQFRLELIK TKALALLEDLVTKVVDVYKLMEKWLGERYLNEMASTEKLTDVARYHIETSTKIQNELYLSQEDFFINGNIKVFPDPPPSIRPPPVEKEED GTLTIEQLDSLRDQFLDMAPKGIIGNKAFTDILIDLVTLNLGTNNFPSNWMHLTQPELQELTSLLTVNSEFVDWRKFLLVTSMPWPIPLE EELLETLQKFKAVDKEQLGTITFEQYMQAGLWFTGDEDIKIPENPLEPLPFNRQEHLIEFFFRLFADYEKDPPQLDYTQMLLYFACHPDT VEGVYRALSVAVGTHVFQQVKASIPSAEKTSSTDAGPAEEFPEPEENAAREERKLKDDTEKREQKDEEIPENANNEKMSMETLLKVFKGG SEAQDSNRFASHLKIENIYAEGFIKTFQDLGAKNLEPIEVAVLLKHPFIQDLISNYSDYKFPVHIIYVVEMIVCAKGWAPLPSGKQCARW |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_HCN1_ENST00000303230_chr5_45645287_-_SPEF2_ENST00000282469_chr5_35667174_+_1227nt ATGGAAGGAGGCGGCAAGCCCAACTCTTCGTCTAACAGCCGGGACGATGGCAACAGCGTCTTCCCCGCCAAGGCGTCCGCGACGGGCGCG GGGCCGGCCGCGGCCGAGAAGCGCCTGGGCACCCCGCCGGGGGGCGGCGGGGCCGGCGCGAAGGAGCACGGCAACTCCGTGTGCTTCAAG GTGGACGGCGGTGGCGGCGGTGGCGGCGGCGGCGGCGGCGGCGAGGAGCCGGCGGGGGGCTTCGAAGACGCCGAGGGGCCCCGGCGGCAG TACGGCTTCATGCAGAGGCAGTTCACCTCCATGCTGCAGCCCGGGGTCAACAAATTCTCCCTCCGCATGTTTGGGAGCCAGAAGGCGGTG GAAAAGGAGCAGGAAAGGGTTAAAACTGCAGGCTTCTGGATTATCCACCCTTACAGTGATTTCAGGTTTTACTGGGATTTAATAATGCTT ATAATGATGGTTGGAAATCTAGTCATCATACCAGTTGGAATCACATTCTTTACAGAGCAAACAACAACACCATGGATTATTTTCAATGTG GCATCAGATACAGTTTTCCTATTGGACCTGATCATGAATTTTAGGACTGGGACTGTCAATGAAGACAGTTCTGAAATCATCCTGGACCCC AAAGTGATCAAGATGAATTATTTAAAAAGCTGGTTTGTGGTTGACTTCATCTCATCCATCCCAGTGGATTATATCTTTCTTATTGTAGAA AAAGGAATGGATTCTGAAGTTTACAAGACAGCCAGGGCACTTCGCATTGTGAGGTTTACAAAAATTCTCAGTCTCTTGCGTTTATTACGA CTTTCAAGGTTAATTAGATACATACATCAATGGGAAGAGGCTTTGGCAAAACAAGCCAAGATTGACTTTGAAGAACAATTCCTTAAAGAA AAGAGATTTCATGATCAGATTGCTGTGGAAAGAGCTCAAGCTCGTTATGAAAAGCATTATTCAGTATGTGCAGAAATTTTGGATCAAATA GTTGATTTGTCCACTAAAGTGGCAGACTATCGAATGTTGACAAATAATCTGATTCCGTATAAGTTGATGCATGATTGGAAGGAACTATTT TTTAATGCAAAACCCATATATGAACAAGCCTCTGTTAAGACACTACCTGCTAACCCCTCAAGAGAACAACTTACAGAACTGGAGAAAAGG >In-frame_HCN1_ENST00000303230_chr5_45645287_-_SPEF2_ENST00000509059_chr5_35667174_+_2514nt ATGGAAGGAGGCGGCAAGCCCAACTCTTCGTCTAACAGCCGGGACGATGGCAACAGCGTCTTCCCCGCCAAGGCGTCCGCGACGGGCGCG GGGCCGGCCGCGGCCGAGAAGCGCCTGGGCACCCCGCCGGGGGGCGGCGGGGCCGGCGCGAAGGAGCACGGCAACTCCGTGTGCTTCAAG GTGGACGGCGGTGGCGGCGGTGGCGGCGGCGGCGGCGGCGGCGAGGAGCCGGCGGGGGGCTTCGAAGACGCCGAGGGGCCCCGGCGGCAG TACGGCTTCATGCAGAGGCAGTTCACCTCCATGCTGCAGCCCGGGGTCAACAAATTCTCCCTCCGCATGTTTGGGAGCCAGAAGGCGGTG GAAAAGGAGCAGGAAAGGGTTAAAACTGCAGGCTTCTGGATTATCCACCCTTACAGTGATTTCAGGTTTTACTGGGATTTAATAATGCTT ATAATGATGGTTGGAAATCTAGTCATCATACCAGTTGGAATCACATTCTTTACAGAGCAAACAACAACACCATGGATTATTTTCAATGTG GCATCAGATACAGTTTTCCTATTGGACCTGATCATGAATTTTAGGACTGGGACTGTCAATGAAGACAGTTCTGAAATCATCCTGGACCCC AAAGTGATCAAGATGAATTATTTAAAAAGCTGGTTTGTGGTTGACTTCATCTCATCCATCCCAGTGGATTATATCTTTCTTATTGTAGAA AAAGGAATGGATTCTGAAGTTTACAAGACAGCCAGGGCACTTCGCATTGTGAGGTTTACAAAAATTCTCAGTCTCTTGCGTTTATTACGA CTTTCAAGGTTAATTAGATACATACATCAATGGGAAGAGGCTTTGGCAAAACAAGCCAAGATTGACTTTGAAGAACAATTCCTTAAAGAA AAGAGATTTCATGATCAGATTGCTGTGGAAAGAGCTCAAGCTCGTTATGAAAAGCATTATTCAGTATGTGCAGAAATTTTGGATCAAATA GTTGATTTGTCCACTAAAGTGGCAGACTATCGAATGTTGACAAATAATCTGATTCCGTATAAGTTGATGCATGATTGGAAGGAACTATTT TTTAATGCAAAACCCATATATGAACAAGCCTCTGTTAAGACACTACCTGCTAACCCCTCAAGAGAACAACTTACAGAACTGGAGAAAAGG GACTTGCTAGATACCAATGATTATGAAGAATATAAGAACATGGTTGGAGAGTGGGCCTTACCAGAAGAAATGGTTGACAATTTACCACCC TCCAACAATTGCATACTGGGCCATATTCTTCACAGGCTAGCTGAAAAATCTCTTCCTCCTCGAGCGGAATCAACAACACCTGAATTACCT TCATTTGCTGTTAAAGGATGCTTATTGGGGAAAACATTAAGTGGAAAAACTACCATTTTAAGGTCTCTACAAAAAGACTTTCCTATACAG ATACTTTCTATTGACACTCTTGTCCAAGAAGCTATCCAAGCATTTCATGACAATGAAAAAGTCAGTGAGGTTCTACCAATTCAGAAAAAT GATGAAGAAGATGCTCTACCAGTTCTGCAAGAGGAGATTAAAGAAAGCCAGGATCCACAACATGTATTTTCAGCTGGTCCAGTTTCAGAT GAAGTATTACCAGAAACAGAAGGTGCTAATGCTGATAAAACACCAAAAGCTGAAGAAGTCAAATCAAGTGATAGTTTCTTAAAACTCACT ACACGTGCTCAGCTTGGTGCAAAATCAGAACAGTTGCTGAAGAAAGGAAAGAGCATTCCTGATGTGCTGCTTGTTGACATCATAGTAAAT GCTATTAATGAGATACCTGTGAATCAAGACTGTATCCTAGATGGTTTTCCAATGACTTTAAACCAAGCACAGCTTCTGGAAGAAGCTCTT ACAGGCTGCAATAGAAACCTCACAGAAGTGGAAAGAAAAAAAGCACAAAAATCCACATTGGCTATTGATCCTGCGACTTCCAAAGAAATA CCTCTTCCCTCTCCTGCATTTGATTTTGTCATATTATTAGATGTTTCAGATACTTCCTCAATGAGTCGCATGAATGATATTATAGCTGAA GAATTGTCCTATAAAACTGCTCACGAAGATATCAGTCAACGTGTAGCTGCTGAAAACCAAGATAAGGATGGAGACCAAAATTTAAGAGAC CAGATACAACATAGAATTATAGGCTTCTTGGACAACTGGCCTTTATTGGAGCAATGGTTTTCAGAGCCAGAAAATATTTTGATAAAAATC AATGCTGAAATAGATAAGGAATCTTTATGTGAAAAAGTAAAAGAAATTCTTACGACTGAAATAGCAAAAAAAAAGAATAAAGTTGAGAAG AAATTAGAAGAAAAGGAAGCTGAGAAAAAAGCAGCAGCTTCCCTGGCTGAGCTTCCACTTCCTACACCTCCTCCTGCTCCTCCTCCTGAA >In-frame_HCN1_ENST00000303230_chr5_45645287_-_SPEF2_ENST00000356031_chr5_35667174_+_5151nt ATGGAAGGAGGCGGCAAGCCCAACTCTTCGTCTAACAGCCGGGACGATGGCAACAGCGTCTTCCCCGCCAAGGCGTCCGCGACGGGCGCG GGGCCGGCCGCGGCCGAGAAGCGCCTGGGCACCCCGCCGGGGGGCGGCGGGGCCGGCGCGAAGGAGCACGGCAACTCCGTGTGCTTCAAG GTGGACGGCGGTGGCGGCGGTGGCGGCGGCGGCGGCGGCGGCGAGGAGCCGGCGGGGGGCTTCGAAGACGCCGAGGGGCCCCGGCGGCAG TACGGCTTCATGCAGAGGCAGTTCACCTCCATGCTGCAGCCCGGGGTCAACAAATTCTCCCTCCGCATGTTTGGGAGCCAGAAGGCGGTG GAAAAGGAGCAGGAAAGGGTTAAAACTGCAGGCTTCTGGATTATCCACCCTTACAGTGATTTCAGGTTTTACTGGGATTTAATAATGCTT ATAATGATGGTTGGAAATCTAGTCATCATACCAGTTGGAATCACATTCTTTACAGAGCAAACAACAACACCATGGATTATTTTCAATGTG GCATCAGATACAGTTTTCCTATTGGACCTGATCATGAATTTTAGGACTGGGACTGTCAATGAAGACAGTTCTGAAATCATCCTGGACCCC AAAGTGATCAAGATGAATTATTTAAAAAGCTGGTTTGTGGTTGACTTCATCTCATCCATCCCAGTGGATTATATCTTTCTTATTGTAGAA AAAGGAATGGATTCTGAAGTTTACAAGACAGCCAGGGCACTTCGCATTGTGAGGTTTACAAAAATTCTCAGTCTCTTGCGTTTATTACGA CTTTCAAGGTTAATTAGATACATACATCAATGGGAAGAGGCTTTGGCAAAACAAGCCAAGATTGACTTTGAAGAACAATTCCTTAAAGAA AAGAGATTTCATGATCAGATTGCTGTGGAAAGAGCTCAAGCTCGTTATGAAAAGCATTATTCAGTATGTGCAGAAATTTTGGATCAAATA GTTGATTTGTCCACTAAAGTGGCAGACTATCGAATGTTGACAAATAATCTGATTCCGTATAAGTTGATGCATGATTGGAAGGAACTATTT TTTAATGCAAAACCCATATATGAACAAGCCTCTGTTAAGACACTACCTGCTAACCCCTCAAGAGAACAACTTACAGAACTGGAGAAAAGG GACTTGCTAGATACCAATGATTATGAAGAATATAAGAACATGGTTGGAGAGTGGGCCTTACCAGAAGAAATGGTTGACAATTTACCACCC TCCAACAATTGCATACTGGGCCATATTCTTCACAGGCTAGCTGAAAAATCTCTTCCTCCTCGAGCGGAATCAACAACACCTGAATTACCT TCATTTGCTGTTAAAGGATGCTTATTGGGGAAAACATTAAGTGGAAAAACTACCATTTTAAGGTCTCTACAAAAAGACTTTCCTATACAG ATACTTTCTATTGACACTCTTGTCCAAGAAGCTATCCAAGCATTTCATGACAATGAAAAAGTCAGTGAGGTTCTACCAATTCAGAAAAAT GATGAAGAAGATGCTCTACCAGTTCTGCAAGAGGAGATTAAAGAAAGCCAGGATCCACAACATGTATTTTCAGCTGGTCCAGTTTCAGAT GAAGTATTACCAGAAACAGAAGGTGAAACAATGCTTAGTGCTAATGCTGATAAAACACCAAAAGCTGAAGAAGTCAAATCAAGTGATAGT TTCTTAAAACTCACTACACGTGCTCAGCTTGGTGCAAAATCAGAACAGTTGCTGAAGAAAGGAAAGAGCATTCCTGATGTGCTGCTTGTT GACATCATAGTAAATGCTATTAATGAGATACCTGTGAATCAAGACTGTATCCTAGATGGTTTTCCAATGACTTTAAACCAAGCACAGCTT CTGGAAGAAGCTCTTACAGGCTGCAATAGAAACCTCACAGAAGTGGAAAGAAAAAAAGCACAAAAATCCACATTGGCTATTGATCCTGCG ACTTCCAAAGAAATACCTCTTCCCTCTCCTGCATTTGATTTTGTCATATTATTAGATGTTTCAGATACTTCCTCAATGAGTCGCATGAAT GATATTATAGCTGAAGAATTGTCCTATAAAACTGCTCACGAAGATATCAGTCAACGTGTAGCTGCTGAAAACCAAGATAAGGATGGAGAC CAAAATTTAAGAGACCAGATACAACATAGAATTATAGGCTTCTTGGACAACTGGCCTTTATTGGAGCAATGGTTTTCAGAGCCAGAAAAT ATTTTGATAAAAATCAATGCTGAAATAGATAAGGAATCTTTATGTGAAAAAGTAAAAGAAATTCTTACGACTGAAATAGCAAAAAAAAAG AATAAAGTTGAGAAGAAATTAGAAGAAAAGGAAGCTGAGAAAAAAGCAGCAGCTTCCCTGGCTGAGCTTCCACTTCCTACACCTCCTCCT GCTCCTCCTCCTGAACCAGAAAAAGAGAAGGAAATTCATCAAAGCCATGTGGCTTCAAAAACTCCTACTGCAAAAGGAAAACCTCAATCA GAAGCCCCGCATGGTAAGCAAGAATCTCTTCAGGAAGGAAAAGGGAAGAAAGGTGAGACCGCACTCAAAAGAAAAGGTTCTCCTAAAGGA AAATCATCAGGAGGAAAAGTACCAGTAAAGAAATCACCTGCTGACTCTACAGATACATCACCTGTTGCAATAGTGCCACAGCCACCTAAG CCAGGATCAGAAGAATGGGTCTATGTGAATGAACCAGTTCCTGAGGAAATGCCTTTGTTTTTAGTACCTTACTGGGAACTAATAGAAAAT TCCTATATAAACACCATCAAAACAGTACTCAGGCATCTGAGGGAAGACCAGCATACTGTGCTTGCTTACTTATATGAGATTAGAACAAGT TTCCAGGAGTTTCTAAAGCGTCCGGATCACAAGCAAGATTTTGTAGCTCAATGGCAGGCTGATTTCAACTCCCTTCCTGATGACCTGTGG GATGATGAGGAAACAAAGGCTGAACTACATCAACGAGTGAATGATCTGCGAGACCGCCTGTGGGACATTTGTGATGCCCGGAAGGAAGAG GCGGAGCAGGAGCGGCTTGACATCATTAATGAGAGCTGGTTACAGGACACTCTTGGAATGACAATGAACCATTTCTTTTCCCTGATGCAG GCAGAGCTGAACCGTTTCCAAGATACAAAGAGACTCCTTCAAGATTATTACTGGGGAATGGAAAGTAAAATCCCAGTAGAGGACAACAAG AGATTTACTCGAATCCCTTTGGTCCAACTGGATAGTAAAGACAATTCTGAAAGCCAGCTTAGAATTCCTCTAGTTCCTCGAATATCCATT TCTCTGGAAACAGTTACACCCAAACCAAAAACAAAATCAGTACTGAAGGGCAAGATGGATAACTCCCTAGAAAACGTTGAGTCCAACTTT GAGGCCGATGAAAAGTTGGTCATGGACACCTGGCAGCAGGCTTCTTTAGCAGTATCTCACATGGTGGCTGCTGAAATTCATCAGAGGCTT ATGGAAGAAGAAAAAGAAAACCAGCCAGCAGACCCCAAAGAAAAATCTCCTCAGATGGGTGCAAATAAAAAAGTCAAAAAGGAGCCACCC AAGAAAAAACAGGAAGACAAAAAACCCAAAGGTAAATCACCACCTATGGCAGAAGCAACTCCTGTCATAGTAACAACAGAGGAAATTGCT GAAATCAAAAGGAAAAATGAACTGAGGGTCAAAATAAAAGAAGAACACCTTGCTGCCTTGCAATTTGAAGAAATAGCCACGCAATTTCGA CTTGAACTGATAAAGACAAAAGCATTGGCTCTTCTTGAAGATTTAGTAACAAAGGTGGTTGATGTATATAAACTCATGGAAAAATGGCTT GGTGAGAGGTATTTGAATGAAATGGCCAGTACAGAAAAATTAACTGACGTAGCTCGCTATCACATTGAAACATCTACAAAAATTCAGAAT GAACTTTATTTAAGCCAAGAAGACTTCTTCATTAATGGCAATATAAAAGTCTTCCCAGATCCTCCCCCATCAATACGTCCTCCACCTGTA GAAAAGGAAGAAGATGGTACCCTGACCATTGAACAGCTTGACAGTCTTCGAGATCAGTTCTTAGATATGGCACCTAAAGGCATAATAGGA AATAAAGCATTTACTGACATTCTGATCGATTTGGTGACCCTGAACCTTGGCACAAACAACTTTCCTAGTAATTGGATGCACCTTACCCAA CCTGAATTACAGGAATTAACATCTTTATTAACAGTCAACTCCGAGTTCGTGGACTGGCGGAAGTTCCTGTTAGTAACCTCAATGCCTTGG CCCATTCCCTTGGAGGAGGAGCTCCTTGAGACCCTTCAGAAGTTCAAGGCTGTGGATAAGGAGCAGTTGGGCACCATCACTTTTGAGCAG TATATGCAGGCTGGTCTGTGGTTTACAGGAGATGAAGATATAAAAATTCCAGAAAATCCTCTTGAACCCCTTCCATTTAATAGGCAGGAG CATCTTATAGAGTTTTTCTTTAGGCTATTTGCTGACTATGAGAAGGATCCACCCCAGCTTGACTACACACAGATGCTGCTTTACTTTGCT TGCCACCCAGACACCGTGGAAGGAGTCTACAGGGCCCTCAGTGTGGCTGTTGGAACTCATGTCTTCCAACAAGTCAAAGCTTCCATTCCA AGTGCAGAAAAGACCTCCTCAACTGATGCAGGTCCAGCTGAGGAATTTCCTGAACCTGAGGAAAATGCTGCAAGAGAAGAAAGGAAATTA AAAGACGACACGGAGAAAAGGGAACAGAAGGATGAAGAAATCCCTGAAAATGCAAACAATGAAAAGATGTCCATGGAAACACTACTCAAA GTGTTCAAAGGGGGAAGTGAAGCACAGGACTCCAATAGATTTGCCAGCCACCTAAAGATAGAGAACATTTATGCAGAGGGCTTCATAAAA ACATTTCAAGACCTAGGTGCCAAGAACCTGGAGCCAATTGAAGTCGCTGTTCTCTTGAAGCATCCTTTTATTCAAGACCTGATTTCAAAT TATTCAGACTATAAGTTTCCTGATATTAAAATAATTCTCCAAAGGAGTGAACATGTACAAGGAAGTGATGGAGAGAGATCACCTTCAAGA >In-frame_HCN1_ENST00000303230_chr5_45645287_-_SPEF2_ENST00000440995_chr5_35667174_+_5139nt ATGGAAGGAGGCGGCAAGCCCAACTCTTCGTCTAACAGCCGGGACGATGGCAACAGCGTCTTCCCCGCCAAGGCGTCCGCGACGGGCGCG GGGCCGGCCGCGGCCGAGAAGCGCCTGGGCACCCCGCCGGGGGGCGGCGGGGCCGGCGCGAAGGAGCACGGCAACTCCGTGTGCTTCAAG GTGGACGGCGGTGGCGGCGGTGGCGGCGGCGGCGGCGGCGGCGAGGAGCCGGCGGGGGGCTTCGAAGACGCCGAGGGGCCCCGGCGGCAG TACGGCTTCATGCAGAGGCAGTTCACCTCCATGCTGCAGCCCGGGGTCAACAAATTCTCCCTCCGCATGTTTGGGAGCCAGAAGGCGGTG GAAAAGGAGCAGGAAAGGGTTAAAACTGCAGGCTTCTGGATTATCCACCCTTACAGTGATTTCAGGTTTTACTGGGATTTAATAATGCTT ATAATGATGGTTGGAAATCTAGTCATCATACCAGTTGGAATCACATTCTTTACAGAGCAAACAACAACACCATGGATTATTTTCAATGTG GCATCAGATACAGTTTTCCTATTGGACCTGATCATGAATTTTAGGACTGGGACTGTCAATGAAGACAGTTCTGAAATCATCCTGGACCCC AAAGTGATCAAGATGAATTATTTAAAAAGCTGGTTTGTGGTTGACTTCATCTCATCCATCCCAGTGGATTATATCTTTCTTATTGTAGAA AAAGGAATGGATTCTGAAGTTTACAAGACAGCCAGGGCACTTCGCATTGTGAGGTTTACAAAAATTCTCAGTCTCTTGCGTTTATTACGA CTTTCAAGGTTAATTAGATACATACATCAATGGGAAGAGGCTTTGGCAAAACAAGCCAAGATTGACTTTGAAGAACAATTCCTTAAAGAA AAGAGATTTCATGATCAGATTGCTGTGGAAAGAGCTCAAGCTCGTTATGAAAAGCATTATTCAGTATGTGCAGAAATTTTGGATCAAATA GTTGATTTGTCCACTAAAGTGGCAGACTATCGAATGTTGACAAATAATCTGATTCCGTATAAGTTGATGCATGATTGGAAGGAACTATTT TTTAATGCAAAACCCATATATGAACAAGCCTCTGTTAAGACACTACCTGCTAACCCCTCAAGAGAACAACTTACAGAACTGGAGAAAAGG GACTTGCTAGATACCAATGATTATGAAGAATATAAGAACATGGTTGGAGAGTGGGCCTTACCAGAAGAAATGGTTGACAATTTACCACCC TCCAACAATTGCATACTGGGCCATATTCTTCACAGGCTAGCTGAAAAATCTCTTCCTCCTCGAGCGGAATCAACAACACCTGAATTACCT TCATTTGCTGTTAAAGGATGCTTATTGGGGAAAACATTAAGTGGAAAAACTACCATTTTAAGGTCTCTACAAAAAGACTTTCCTATACAG ATACTTTCTATTGACACTCTTGTCCAAGAAGCTATCCAAGCATTTCATGACAATGAAAAAGTCAGTGAGGTTCTACCAATTCAGAAAAAT GATGAAGAAGATGCTCTACCAGTTCTGCAAGAGGAGATTAAAGAAAGCCAGGATCCACAACATGTATTTTCAGCTGGTCCAGTTTCAGAT GAAGTATTACCAGAAACAGAAGGTGCTAATGCTGATAAAACACCAAAAGCTGAAGAAGTCAAATCAAGTGATAGTTTCTTAAAACTCACT ACACGTGCTCAGCTTGGTGCAAAATCAGAACAGTTGCTGAAGAAAGGAAAGAGCATTCCTGATGTGCTGCTTGTTGACATCATAGTAAAT GCTATTAATGAGATACCTGTGAATCAAGACTGTATCCTAGATGGTTTTCCAATGACTTTAAACCAAGCACAGCTTCTGGAAGAAGCTCTT ACAGGCTGCAATAGAAACCTCACAGAAGTGGAAAGAAAAAAAGCACAAAAATCCACATTGGCTATTGATCCTGCGACTTCCAAAGAAATA CCTCTTCCCTCTCCTGCATTTGATTTTGTCATATTATTAGATGTTTCAGATACTTCCTCAATGAGTCGCATGAATGATATTATAGCTGAA GAATTGTCCTATAAAACTGCTCACGAAGATATCAGTCAACGTGTAGCTGCTGAAAACCAAGATAAGGATGGAGACCAAAATTTAAGAGAC CAGATACAACATAGAATTATAGGCTTCTTGGACAACTGGCCTTTATTGGAGCAATGGTTTTCAGAGCCAGAAAATATTTTGATAAAAATC AATGCTGAAATAGATAAGGAATCTTTATGTGAAAAAGTAAAAGAAATTCTTACGACTGAAATAGCAAAAAAAAAGAATAAAGTTGAGAAG AAATTAGAAGAAAAGGAAGCTGAGAAAAAAGCAGCAGCTTCCCTGGCTGAGCTTCCACTTCCTACACCTCCTCCTGCTCCTCCTCCTGAA CCAGAAAAAGAGAAGGAAATTCATCAAAGCCATGTGGCTTCAAAAACTCCTACTGCAAAAGGAAAACCTCAATCAGAAGCCCCGCATGGT AAGCAAGAATCTCTTCAGGAAGGAAAAGGGAAGAAAGGTGAGACCGCACTCAAAAGAAAAGGTTCTCCTAAAGGAAAATCATCAGGAGGA AAAGTACCAGTAAAGAAATCACCTGCTGACTCTACAGATACATCACCTGTTGCAATAGTGCCACAGCCACCTAAGCCAGGATCAGAAGAA TGGGTCTATGTGAATGAACCAGTTCCTGAGGAAATGCCTTTGTTTTTAGTACCTTACTGGGAACTAATAGAAAATTCCTATATAAACACC ATCAAAACAGTACTCAGGCATCTGAGGGAAGACCAGCATACTGTGCTTGCTTACTTATATGAGATTAGAACAAGTTTCCAGGAGTTTCTA AAGCGTCCGGATCACAAGCAAGATTTTGTAGCTCAATGGCAGGCTGATTTCAACTCCCTTCCTGATGACCTGTGGGATGATGAGGAAACA AAGGCTGAACTACATCAACGAGTGAATGATCTGCGAGACCGCCTGTGGGACATTTGTGATGCCCGGAAGGAAGAGGCGGAGCAGGAGCGG CTTGACATCATTAATGAGAGCTGGTTACAGGACACTCTTGGAATGACAATGAACCATTTCTTTTCCCTGATGCAGGCAGAGCTGAACCGT TTCCAAGATACAAAGAGACTCCTTCAAGATTATTACTGGGGAATGGAAAGTAAAATCCCAGTAGAGGACAACAAGAGATTTACTCGAATC CCTTTGGTCCAACTGGATAGTAAAGACAATTCTGAAAGCCAGCTTAGAATTCCTCTAGTTCCTCGAATATCCATTTCTCTGGAAACAGTT ACACCCAAACCAAAAACAAAATCAGTACTGAAGGGCAAGATGGATAACTCCCTAGAAAACGTTGAGTCCAACTTTGAGGCCGATGAAAAG TTGGTCATGGACACCTGGCAGCAGGCTTCTTTAGCAGTATCTCACATGGTGGCTGCTGAAATTCATCAGAGGCTTATGGAAGAAGAAAAA GAAAACCAGCCAGCAGACCCCAAAGAAAAATCTCCTCAGATGGGTGCAAATAAAAAAGTCAAAAAGGAGCCACCCAAGAAAAAACAGGAA GACAAAAAACCCAAAGGTAAATCACCACCTATGGCAGAAGCAACTCCTGTCATAGTAACAACAGAGGAAATTGCTGAAATCAAAAGGAAA AATGAACTGAGGGTCAAAATAAAAGAAGAACACCTTGCTGCCTTGCAATTTGAAGAAATAGCCACGCAATTTCGACTTGAACTGATAAAG ACAAAAGCATTGGCTCTTCTTGAAGATTTAGTAACAAAGGTGGTTGATGTATATAAACTCATGGAAAAATGGCTTGGTGAGAGGTATTTG AATGAAATGGCCAGTACAGAAAAATTAACTGACGTAGCTCGCTATCACATTGAAACATCTACAAAAATTCAGAATGAACTTTATTTAAGC CAAGAAGACTTCTTCATTAATGGCAATATAAAAGTCTTCCCAGATCCTCCCCCATCAATACGTCCTCCACCTGTAGAAAAGGAAGAAGAT GGTACCCTGACCATTGAACAGCTTGACAGTCTTCGAGATCAGTTCTTAGATATGGCACCTAAAGGCATAATAGGAAATAAAGCATTTACT GACATTCTGATCGATTTGGTGACCCTGAACCTTGGCACAAACAACTTTCCTAGTAATTGGATGCACCTTACCCAACCTGAATTACAGGAA TTAACATCTTTATTAACAGTCAACTCCGAGTTCGTGGACTGGCGGAAGTTCCTGTTAGTAACCTCAATGCCTTGGCCCATTCCCTTGGAG GAGGAGCTCCTTGAGACCCTTCAGAAGTTCAAGGCTGTGGATAAGGAGCAGTTGGGCACCATCACTTTTGAGCAGTATATGCAGGCTGGT CTGTGGTTTACAGGAGATGAAGATATAAAAATTCCAGAAAATCCTCTTGAACCCCTTCCATTTAATAGGCAGGAGCATCTTATAGAGTTT TTCTTTAGGCTATTTGCTGACTATGAGAAGGATCCACCCCAGCTTGACTACACACAGATGCTGCTTTACTTTGCTTGCCACCCAGACACC GTGGAAGGAGTCTACAGGGCCCTCAGTGTGGCTGTTGGAACTCATGTCTTCCAACAAGTCAAAGCTTCCATTCCAAGTGCAGAAAAGACC TCCTCAACTGATGCAGGTCCAGCTGAGGAATTTCCTGAACCTGAGGAAAATGCTGCAAGAGAAGAAAGGAAATTAAAAGACGACACGGAG AAAAGGGAACAGAAGGATGAAGAAATCCCTGAAAATGCAAACAATGAAAAGATGTCCATGGAAACACTACTCAAAGTGTTCAAAGGGGGA AGTGAAGCACAGGACTCCAATAGATTTGCCAGCCACCTAAAGATAGAGAACATTTATGCAGAGGGCTTCATAAAAACATTTCAAGACCTA GGTGCCAAGAACCTGGAGCCAATTGAAGTCGCTGTTCTCTTGAAGCATCCTTTTATTCAAGACCTGATTTCAAATTATTCAGACTATAAG TTTCCTGTACACATCATCTATGTAGTGGAAATGATAGTGTGTGCAAAAGGTTGGGCACCACTTCCATCAGGAAAACAGTGTGCAAGATGG |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_HCN1_ENST00000303230_chr5_45645287_-_SPEF2_ENST00000282469_chr5_35667174_+_2612nt GGCGCCGGGCGGCCGGCGAGTCTGGAGCCCGCGCCGTCGCCGGCCGCGTCCTCCGGGCATGGAAGGAGGCGGCAAGCCCAACTCTTCGTC TAACAGCCGGGACGATGGCAACAGCGTCTTCCCCGCCAAGGCGTCCGCGACGGGCGCGGGGCCGGCCGCGGCCGAGAAGCGCCTGGGCAC CCCGCCGGGGGGCGGCGGGGCCGGCGCGAAGGAGCACGGCAACTCCGTGTGCTTCAAGGTGGACGGCGGTGGCGGCGGTGGCGGCGGCGG CGGCGGCGGCGAGGAGCCGGCGGGGGGCTTCGAAGACGCCGAGGGGCCCCGGCGGCAGTACGGCTTCATGCAGAGGCAGTTCACCTCCAT GCTGCAGCCCGGGGTCAACAAATTCTCCCTCCGCATGTTTGGGAGCCAGAAGGCGGTGGAAAAGGAGCAGGAAAGGGTTAAAACTGCAGG CTTCTGGATTATCCACCCTTACAGTGATTTCAGGTTTTACTGGGATTTAATAATGCTTATAATGATGGTTGGAAATCTAGTCATCATACC AGTTGGAATCACATTCTTTACAGAGCAAACAACAACACCATGGATTATTTTCAATGTGGCATCAGATACAGTTTTCCTATTGGACCTGAT CATGAATTTTAGGACTGGGACTGTCAATGAAGACAGTTCTGAAATCATCCTGGACCCCAAAGTGATCAAGATGAATTATTTAAAAAGCTG GTTTGTGGTTGACTTCATCTCATCCATCCCAGTGGATTATATCTTTCTTATTGTAGAAAAAGGAATGGATTCTGAAGTTTACAAGACAGC CAGGGCACTTCGCATTGTGAGGTTTACAAAAATTCTCAGTCTCTTGCGTTTATTACGACTTTCAAGGTTAATTAGATACATACATCAATG GGAAGAGGCTTTGGCAAAACAAGCCAAGATTGACTTTGAAGAACAATTCCTTAAAGAAAAGAGATTTCATGATCAGATTGCTGTGGAAAG AGCTCAAGCTCGTTATGAAAAGCATTATTCAGTATGTGCAGAAATTTTGGATCAAATAGTTGATTTGTCCACTAAAGTGGCAGACTATCG AATGTTGACAAATAATCTGATTCCGTATAAGTTGATGCATGATTGGAAGGAACTATTTTTTAATGCAAAACCCATATATGAACAAGCCTC TGTTAAGACACTACCTGCTAACCCCTCAAGAGAACAACTTACAGAACTGGAGAAAAGGGACTTGCTAGATACCAATGATTATGAAGAATA TAAGGTACCTACTGATATGAAATAATTAGAATGCTACATAATAAATCCTTTTTCTTTAACATTAATTTTGTGATATTCCTTATTTCATTT CTACTAATAAAAATAGACATGTTTTGTTTGCATTTTCCCTTGTTTTAATTTGTATGTTTGTACTACTTTTTAGATGCTTAAACTATACAT AAGCTATTATCTATTGTTCCTAGTAATCTTAGGGGAGTGGTCTGAAAAAACATCAAGCATAGTAATTGTCTGGGTAGACAGATTTCAGAA TTTTTAAAATGCTTTAATTTATTTATTAGCATTTTTCTTTGTATGGGCTGTGTACTTTTGCTTCAAAAACCATTGTTAAAAAGTATTTCT TTTGTAATCAATCTAAATAATAGACTTTTTTTACAGGCAAAATGAAAGAGGAGGAAGTCTGGGTTTTATGAATAGCATAGATTCAAACAA TCTTTTATTCAAAGATTGAAATAAAAAGTATCGGGTGCCAACTGTGATTTTTAGAAGAACTGTTGTAAAGCCTTTGAGATTAGACAGACT AGAGCTACATTACTGAAATTGCCAACTACTAACTGTGTGACCTTAGGTGACCAGTTCATTAAGGGCTAATAGATTTCCATTTTTCAATTA ATGGAAAGGGAATGCTACTATACCTACTTCATTTAAAATAACATGAGTTAAACACTTAGCTGAGTGCACTTCATGTTGGATGCATATAAT ACATATCCATTTCTTTCCTCACCATCCTACTCTCCCCATCCCACTCCATCTCACCCTTAGAAGTAAAGGTGTAACAATCATAGCTTTTGG ATAGAAATTTTGAGTGGATCAACAGCAATGGAATGAGGAGTGAGGCTTTTTATTAGAAAAATTACAAAATGAGTCCCGGAAGGTCAGTAA GTGCAACATGAAAAAAATCTATGAAAAGATTATTTGACCTAATTATTCACTGATAGTACATACTCAACAAAGGTTTGTGGGACAAAGGGT GAATAAAATGAATGAATTACAATGAACAAAGAAAAGTGCAAAATAACACTAACAAGTAAATATTACAAGAAGATAACCTTGTGGTTAAAA GATAAGGAAAAATATGAGATTATGAGAAATTAAATGTATACTATATTTTAATTAAATGAATCTGTATTTGTAGCACTAAGAGAATTATTA TTAAGGATTGACTAGAACCTTAAAAGATATATGTGGATGTTTGTTTTGTACGGTTGTAAAATATACTAGACCTATTACATCCACCTAAAG TATAATGCCATGTAAGAAAATGCTTTGACAGTATCAACCTGTGTTAAGGTATTTCTTTCCATTGTAAATTAAAAGTCATTTTATTTGACA >In-frame_HCN1_ENST00000303230_chr5_45645287_-_SPEF2_ENST00000509059_chr5_35667174_+_4293nt GGCGCCGGGCGGCCGGCGAGTCTGGAGCCCGCGCCGTCGCCGGCCGCGTCCTCCGGGCATGGAAGGAGGCGGCAAGCCCAACTCTTCGTC TAACAGCCGGGACGATGGCAACAGCGTCTTCCCCGCCAAGGCGTCCGCGACGGGCGCGGGGCCGGCCGCGGCCGAGAAGCGCCTGGGCAC CCCGCCGGGGGGCGGCGGGGCCGGCGCGAAGGAGCACGGCAACTCCGTGTGCTTCAAGGTGGACGGCGGTGGCGGCGGTGGCGGCGGCGG CGGCGGCGGCGAGGAGCCGGCGGGGGGCTTCGAAGACGCCGAGGGGCCCCGGCGGCAGTACGGCTTCATGCAGAGGCAGTTCACCTCCAT GCTGCAGCCCGGGGTCAACAAATTCTCCCTCCGCATGTTTGGGAGCCAGAAGGCGGTGGAAAAGGAGCAGGAAAGGGTTAAAACTGCAGG CTTCTGGATTATCCACCCTTACAGTGATTTCAGGTTTTACTGGGATTTAATAATGCTTATAATGATGGTTGGAAATCTAGTCATCATACC AGTTGGAATCACATTCTTTACAGAGCAAACAACAACACCATGGATTATTTTCAATGTGGCATCAGATACAGTTTTCCTATTGGACCTGAT CATGAATTTTAGGACTGGGACTGTCAATGAAGACAGTTCTGAAATCATCCTGGACCCCAAAGTGATCAAGATGAATTATTTAAAAAGCTG GTTTGTGGTTGACTTCATCTCATCCATCCCAGTGGATTATATCTTTCTTATTGTAGAAAAAGGAATGGATTCTGAAGTTTACAAGACAGC CAGGGCACTTCGCATTGTGAGGTTTACAAAAATTCTCAGTCTCTTGCGTTTATTACGACTTTCAAGGTTAATTAGATACATACATCAATG GGAAGAGGCTTTGGCAAAACAAGCCAAGATTGACTTTGAAGAACAATTCCTTAAAGAAAAGAGATTTCATGATCAGATTGCTGTGGAAAG AGCTCAAGCTCGTTATGAAAAGCATTATTCAGTATGTGCAGAAATTTTGGATCAAATAGTTGATTTGTCCACTAAAGTGGCAGACTATCG AATGTTGACAAATAATCTGATTCCGTATAAGTTGATGCATGATTGGAAGGAACTATTTTTTAATGCAAAACCCATATATGAACAAGCCTC TGTTAAGACACTACCTGCTAACCCCTCAAGAGAACAACTTACAGAACTGGAGAAAAGGGACTTGCTAGATACCAATGATTATGAAGAATA TAAGAACATGGTTGGAGAGTGGGCCTTACCAGAAGAAATGGTTGACAATTTACCACCCTCCAACAATTGCATACTGGGCCATATTCTTCA CAGGCTAGCTGAAAAATCTCTTCCTCCTCGAGCGGAATCAACAACACCTGAATTACCTTCATTTGCTGTTAAAGGATGCTTATTGGGGAA AACATTAAGTGGAAAAACTACCATTTTAAGGTCTCTACAAAAAGACTTTCCTATACAGATACTTTCTATTGACACTCTTGTCCAAGAAGC TATCCAAGCATTTCATGACAATGAAAAAGTCAGTGAGGTTCTACCAATTCAGAAAAATGATGAAGAAGATGCTCTACCAGTTCTGCAAGA GGAGATTAAAGAAAGCCAGGATCCACAACATGTATTTTCAGCTGGTCCAGTTTCAGATGAAGTATTACCAGAAACAGAAGGTGCTAATGC TGATAAAACACCAAAAGCTGAAGAAGTCAAATCAAGTGATAGTTTCTTAAAACTCACTACACGTGCTCAGCTTGGTGCAAAATCAGAACA GTTGCTGAAGAAAGGAAAGAGCATTCCTGATGTGCTGCTTGTTGACATCATAGTAAATGCTATTAATGAGATACCTGTGAATCAAGACTG TATCCTAGATGGTTTTCCAATGACTTTAAACCAAGCACAGCTTCTGGAAGAAGCTCTTACAGGCTGCAATAGAAACCTCACAGAAGTGGA AAGAAAAAAAGCACAAAAATCCACATTGGCTATTGATCCTGCGACTTCCAAAGAAATACCTCTTCCCTCTCCTGCATTTGATTTTGTCAT ATTATTAGATGTTTCAGATACTTCCTCAATGAGTCGCATGAATGATATTATAGCTGAAGAATTGTCCTATAAAACTGCTCACGAAGATAT CAGTCAACGTGTAGCTGCTGAAAACCAAGATAAGGATGGAGACCAAAATTTAAGAGACCAGATACAACATAGAATTATAGGCTTCTTGGA CAACTGGCCTTTATTGGAGCAATGGTTTTCAGAGCCAGAAAATATTTTGATAAAAATCAATGCTGAAATAGATAAGGAATCTTTATGTGA AAAAGTAAAAGAAATTCTTACGACTGAAATAGCAAAAAAAAAGAATAAAGTTGAGAAGAAATTAGAAGAAAAGGAAGCTGAGAAAAAAGC AGCAGCTTCCCTGGCTGAGCTTCCACTTCCTACACCTCCTCCTGCTCCTCCTCCTGAACCAGAAAAAGAGAAGGAAATTCATCAAAGCCA TGTGGCTTCAAAAACTCCTACTGCAAAAGGAAAACCTCAATCAGGTGATTGACAGAATGATTTATAATCCTGTTTTCAGTTTCTTATTTT TACTCAGTAAAGAATTATAAATTATAGTCTATCTACATTCAGACTTTGGGCAACTTCAATCATATGAAACAAGGCTTTACACTCAGATGG AAGTGGAAAAGCCCTCGGAGTAGCTAAAAGCGTAGTTGTTACAAAGCCCAACTTCTTTGCCATGTAGGAGGAGACATGGAGTCATCACAC CTAGGTCTACTGATTAGAGTAAGACCACAGACGAGAAGAGGAAAAGGCACAGAGTAACAGGTAACTTCAGGCAGATCAAGAGGATACACG TCTGTGTGCTGAACTATAGAGTTACATTTATGTAATGAGTAAGAACATCTTAATAAAATAAGAATGAGTATAGCTGGTTTTCCACCAGAA TAAGGGAACAAATTAACAGCAACCATTAGAACTAGAATTTATATGTAATTGTAAATCTTCAGGACTATGTGATTATAAAAGTATAGAAAC AAGCTCCTGCCATCTCAGTAAACATATATTTATGGACACAGAGATAAAGAGCCTAGATAGAGAACACTTTTAGTTTAAGTTTGTTCTAGA TCCTTAACCGCTATGGACCATAAGTCTAGCATTAAGTGGCAGACAATGAATATAATGACAAAAGTGAAGTGCTTAATTGTTGTAATGCAT GATATTGGTAGAGTGTCAGTATCCATTTGTGTGTGTATATAAAACAAATGAGGCTCTGGTTTCTAGTTTCAGCTTTATAAATGGCTGACT GTGCAGTTACACCATGTCTACCTAAGTATCTTTGATACTGTGTCATGACCACATTTCTAAACTCTATAGTCTTTCTGCCTCACGGAGATT TGAGATAGGTCTTAATTTTTAAAATTAAACTTATTCATATTAAACAAAGACATATGAAGACTTTAGTAAGATATATTATGATATATTAAA GACCATTCTGCTCCAGGAAATTAGAAATTAACTACAGGCAAAATACACACATCCTAAAAAATGTTTTTATCATGTCAACAATAAAACACA AAGACATGAATTAAACATACACCCTTTTCCCGCTGTCTCATTAGGAAATTAAAAAACAATTCAGAGGTCTGGAGGAAAATGGAAATATTT AAAATGCTTTTTAGAACTGGGGAAGACAGGCCAAGCATGGTGGCTCATCCCTGTAATCCCAGCACTTTGGGAGGCTGAGGTGGGCAGATC ACCAGAAATCAGGAGTTCGAGACCCCGCTGGCCAACAGGGCAAAACCCATCTCTACCAAAAATACAAAAATTAGCTGGGCGTGGTGGCAG GCACCTGTAATCCCAGCTGCTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGAGAGGCGGAGGTTGCAGTGAGCCGAGATTGCCCCA CTGCACTCTAGCCTGGGGGATAGAGTGAAACTCTACCTCCAAAAAAAAGAAAAGAAAAATAACTGAGGAAGACAGTTTTCACAGTGGGTC AGGTGAGCCTAGAATTATCGAATATCGTCCTTTAACCTATAGCTATGACTCTAGGTTAAAGCTCCTCCTCAGCTTGCTCCAGTCAAGAGT ATCTATGTATTTGAGCCATTTCCTGAAACCAGACTCTAGTGTTTCTGATCAGACCAGCTCAGTCTTTAAGTTTCTGAAGTTTGTTTGCTA >In-frame_HCN1_ENST00000303230_chr5_45645287_-_SPEF2_ENST00000356031_chr5_35667174_+_5267nt GGCGCCGGGCGGCCGGCGAGTCTGGAGCCCGCGCCGTCGCCGGCCGCGTCCTCCGGGCATGGAAGGAGGCGGCAAGCCCAACTCTTCGTC TAACAGCCGGGACGATGGCAACAGCGTCTTCCCCGCCAAGGCGTCCGCGACGGGCGCGGGGCCGGCCGCGGCCGAGAAGCGCCTGGGCAC CCCGCCGGGGGGCGGCGGGGCCGGCGCGAAGGAGCACGGCAACTCCGTGTGCTTCAAGGTGGACGGCGGTGGCGGCGGTGGCGGCGGCGG CGGCGGCGGCGAGGAGCCGGCGGGGGGCTTCGAAGACGCCGAGGGGCCCCGGCGGCAGTACGGCTTCATGCAGAGGCAGTTCACCTCCAT GCTGCAGCCCGGGGTCAACAAATTCTCCCTCCGCATGTTTGGGAGCCAGAAGGCGGTGGAAAAGGAGCAGGAAAGGGTTAAAACTGCAGG CTTCTGGATTATCCACCCTTACAGTGATTTCAGGTTTTACTGGGATTTAATAATGCTTATAATGATGGTTGGAAATCTAGTCATCATACC AGTTGGAATCACATTCTTTACAGAGCAAACAACAACACCATGGATTATTTTCAATGTGGCATCAGATACAGTTTTCCTATTGGACCTGAT CATGAATTTTAGGACTGGGACTGTCAATGAAGACAGTTCTGAAATCATCCTGGACCCCAAAGTGATCAAGATGAATTATTTAAAAAGCTG GTTTGTGGTTGACTTCATCTCATCCATCCCAGTGGATTATATCTTTCTTATTGTAGAAAAAGGAATGGATTCTGAAGTTTACAAGACAGC CAGGGCACTTCGCATTGTGAGGTTTACAAAAATTCTCAGTCTCTTGCGTTTATTACGACTTTCAAGGTTAATTAGATACATACATCAATG GGAAGAGGCTTTGGCAAAACAAGCCAAGATTGACTTTGAAGAACAATTCCTTAAAGAAAAGAGATTTCATGATCAGATTGCTGTGGAAAG AGCTCAAGCTCGTTATGAAAAGCATTATTCAGTATGTGCAGAAATTTTGGATCAAATAGTTGATTTGTCCACTAAAGTGGCAGACTATCG AATGTTGACAAATAATCTGATTCCGTATAAGTTGATGCATGATTGGAAGGAACTATTTTTTAATGCAAAACCCATATATGAACAAGCCTC TGTTAAGACACTACCTGCTAACCCCTCAAGAGAACAACTTACAGAACTGGAGAAAAGGGACTTGCTAGATACCAATGATTATGAAGAATA TAAGAACATGGTTGGAGAGTGGGCCTTACCAGAAGAAATGGTTGACAATTTACCACCCTCCAACAATTGCATACTGGGCCATATTCTTCA CAGGCTAGCTGAAAAATCTCTTCCTCCTCGAGCGGAATCAACAACACCTGAATTACCTTCATTTGCTGTTAAAGGATGCTTATTGGGGAA AACATTAAGTGGAAAAACTACCATTTTAAGGTCTCTACAAAAAGACTTTCCTATACAGATACTTTCTATTGACACTCTTGTCCAAGAAGC TATCCAAGCATTTCATGACAATGAAAAAGTCAGTGAGGTTCTACCAATTCAGAAAAATGATGAAGAAGATGCTCTACCAGTTCTGCAAGA GGAGATTAAAGAAAGCCAGGATCCACAACATGTATTTTCAGCTGGTCCAGTTTCAGATGAAGTATTACCAGAAACAGAAGGTGAAACAAT GCTTAGTGCTAATGCTGATAAAACACCAAAAGCTGAAGAAGTCAAATCAAGTGATAGTTTCTTAAAACTCACTACACGTGCTCAGCTTGG TGCAAAATCAGAACAGTTGCTGAAGAAAGGAAAGAGCATTCCTGATGTGCTGCTTGTTGACATCATAGTAAATGCTATTAATGAGATACC TGTGAATCAAGACTGTATCCTAGATGGTTTTCCAATGACTTTAAACCAAGCACAGCTTCTGGAAGAAGCTCTTACAGGCTGCAATAGAAA CCTCACAGAAGTGGAAAGAAAAAAAGCACAAAAATCCACATTGGCTATTGATCCTGCGACTTCCAAAGAAATACCTCTTCCCTCTCCTGC ATTTGATTTTGTCATATTATTAGATGTTTCAGATACTTCCTCAATGAGTCGCATGAATGATATTATAGCTGAAGAATTGTCCTATAAAAC TGCTCACGAAGATATCAGTCAACGTGTAGCTGCTGAAAACCAAGATAAGGATGGAGACCAAAATTTAAGAGACCAGATACAACATAGAAT TATAGGCTTCTTGGACAACTGGCCTTTATTGGAGCAATGGTTTTCAGAGCCAGAAAATATTTTGATAAAAATCAATGCTGAAATAGATAA GGAATCTTTATGTGAAAAAGTAAAAGAAATTCTTACGACTGAAATAGCAAAAAAAAAGAATAAAGTTGAGAAGAAATTAGAAGAAAAGGA AGCTGAGAAAAAAGCAGCAGCTTCCCTGGCTGAGCTTCCACTTCCTACACCTCCTCCTGCTCCTCCTCCTGAACCAGAAAAAGAGAAGGA AATTCATCAAAGCCATGTGGCTTCAAAAACTCCTACTGCAAAAGGAAAACCTCAATCAGAAGCCCCGCATGGTAAGCAAGAATCTCTTCA GGAAGGAAAAGGGAAGAAAGGTGAGACCGCACTCAAAAGAAAAGGTTCTCCTAAAGGAAAATCATCAGGAGGAAAAGTACCAGTAAAGAA ATCACCTGCTGACTCTACAGATACATCACCTGTTGCAATAGTGCCACAGCCACCTAAGCCAGGATCAGAAGAATGGGTCTATGTGAATGA ACCAGTTCCTGAGGAAATGCCTTTGTTTTTAGTACCTTACTGGGAACTAATAGAAAATTCCTATATAAACACCATCAAAACAGTACTCAG GCATCTGAGGGAAGACCAGCATACTGTGCTTGCTTACTTATATGAGATTAGAACAAGTTTCCAGGAGTTTCTAAAGCGTCCGGATCACAA GCAAGATTTTGTAGCTCAATGGCAGGCTGATTTCAACTCCCTTCCTGATGACCTGTGGGATGATGAGGAAACAAAGGCTGAACTACATCA ACGAGTGAATGATCTGCGAGACCGCCTGTGGGACATTTGTGATGCCCGGAAGGAAGAGGCGGAGCAGGAGCGGCTTGACATCATTAATGA GAGCTGGTTACAGGACACTCTTGGAATGACAATGAACCATTTCTTTTCCCTGATGCAGGCAGAGCTGAACCGTTTCCAAGATACAAAGAG ACTCCTTCAAGATTATTACTGGGGAATGGAAAGTAAAATCCCAGTAGAGGACAACAAGAGATTTACTCGAATCCCTTTGGTCCAACTGGA TAGTAAAGACAATTCTGAAAGCCAGCTTAGAATTCCTCTAGTTCCTCGAATATCCATTTCTCTGGAAACAGTTACACCCAAACCAAAAAC AAAATCAGTACTGAAGGGCAAGATGGATAACTCCCTAGAAAACGTTGAGTCCAACTTTGAGGCCGATGAAAAGTTGGTCATGGACACCTG GCAGCAGGCTTCTTTAGCAGTATCTCACATGGTGGCTGCTGAAATTCATCAGAGGCTTATGGAAGAAGAAAAAGAAAACCAGCCAGCAGA CCCCAAAGAAAAATCTCCTCAGATGGGTGCAAATAAAAAAGTCAAAAAGGAGCCACCCAAGAAAAAACAGGAAGACAAAAAACCCAAAGG TAAATCACCACCTATGGCAGAAGCAACTCCTGTCATAGTAACAACAGAGGAAATTGCTGAAATCAAAAGGAAAAATGAACTGAGGGTCAA AATAAAAGAAGAACACCTTGCTGCCTTGCAATTTGAAGAAATAGCCACGCAATTTCGACTTGAACTGATAAAGACAAAAGCATTGGCTCT TCTTGAAGATTTAGTAACAAAGGTGGTTGATGTATATAAACTCATGGAAAAATGGCTTGGTGAGAGGTATTTGAATGAAATGGCCAGTAC AGAAAAATTAACTGACGTAGCTCGCTATCACATTGAAACATCTACAAAAATTCAGAATGAACTTTATTTAAGCCAAGAAGACTTCTTCAT TAATGGCAATATAAAAGTCTTCCCAGATCCTCCCCCATCAATACGTCCTCCACCTGTAGAAAAGGAAGAAGATGGTACCCTGACCATTGA ACAGCTTGACAGTCTTCGAGATCAGTTCTTAGATATGGCACCTAAAGGCATAATAGGAAATAAAGCATTTACTGACATTCTGATCGATTT GGTGACCCTGAACCTTGGCACAAACAACTTTCCTAGTAATTGGATGCACCTTACCCAACCTGAATTACAGGAATTAACATCTTTATTAAC AGTCAACTCCGAGTTCGTGGACTGGCGGAAGTTCCTGTTAGTAACCTCAATGCCTTGGCCCATTCCCTTGGAGGAGGAGCTCCTTGAGAC CCTTCAGAAGTTCAAGGCTGTGGATAAGGAGCAGTTGGGCACCATCACTTTTGAGCAGTATATGCAGGCTGGTCTGTGGTTTACAGGAGA TGAAGATATAAAAATTCCAGAAAATCCTCTTGAACCCCTTCCATTTAATAGGCAGGAGCATCTTATAGAGTTTTTCTTTAGGCTATTTGC TGACTATGAGAAGGATCCACCCCAGCTTGACTACACACAGATGCTGCTTTACTTTGCTTGCCACCCAGACACCGTGGAAGGAGTCTACAG GGCCCTCAGTGTGGCTGTTGGAACTCATGTCTTCCAACAAGTCAAAGCTTCCATTCCAAGTGCAGAAAAGACCTCCTCAACTGATGCAGG TCCAGCTGAGGAATTTCCTGAACCTGAGGAAAATGCTGCAAGAGAAGAAAGGAAATTAAAAGACGACACGGAGAAAAGGGAACAGAAGGA TGAAGAAATCCCTGAAAATGCAAACAATGAAAAGATGTCCATGGAAACACTACTCAAAGTGTTCAAAGGGGGAAGTGAAGCACAGGACTC CAATAGATTTGCCAGCCACCTAAAGATAGAGAACATTTATGCAGAGGGCTTCATAAAAACATTTCAAGACCTAGGTGCCAAGAACCTGGA GCCAATTGAAGTCGCTGTTCTCTTGAAGCATCCTTTTATTCAAGACCTGATTTCAAATTATTCAGACTATAAGTTTCCTGATATTAAAAT AATTCTCCAAAGGAGTGAACATGTACAAGGAAGTGATGGAGAGAGATCACCTTCAAGACATACAGAGGAAAAGAAATGAAGACAAAAGAG >In-frame_HCN1_ENST00000303230_chr5_45645287_-_SPEF2_ENST00000440995_chr5_35667174_+_5704nt GGCGCCGGGCGGCCGGCGAGTCTGGAGCCCGCGCCGTCGCCGGCCGCGTCCTCCGGGCATGGAAGGAGGCGGCAAGCCCAACTCTTCGTC TAACAGCCGGGACGATGGCAACAGCGTCTTCCCCGCCAAGGCGTCCGCGACGGGCGCGGGGCCGGCCGCGGCCGAGAAGCGCCTGGGCAC CCCGCCGGGGGGCGGCGGGGCCGGCGCGAAGGAGCACGGCAACTCCGTGTGCTTCAAGGTGGACGGCGGTGGCGGCGGTGGCGGCGGCGG CGGCGGCGGCGAGGAGCCGGCGGGGGGCTTCGAAGACGCCGAGGGGCCCCGGCGGCAGTACGGCTTCATGCAGAGGCAGTTCACCTCCAT GCTGCAGCCCGGGGTCAACAAATTCTCCCTCCGCATGTTTGGGAGCCAGAAGGCGGTGGAAAAGGAGCAGGAAAGGGTTAAAACTGCAGG CTTCTGGATTATCCACCCTTACAGTGATTTCAGGTTTTACTGGGATTTAATAATGCTTATAATGATGGTTGGAAATCTAGTCATCATACC AGTTGGAATCACATTCTTTACAGAGCAAACAACAACACCATGGATTATTTTCAATGTGGCATCAGATACAGTTTTCCTATTGGACCTGAT CATGAATTTTAGGACTGGGACTGTCAATGAAGACAGTTCTGAAATCATCCTGGACCCCAAAGTGATCAAGATGAATTATTTAAAAAGCTG GTTTGTGGTTGACTTCATCTCATCCATCCCAGTGGATTATATCTTTCTTATTGTAGAAAAAGGAATGGATTCTGAAGTTTACAAGACAGC CAGGGCACTTCGCATTGTGAGGTTTACAAAAATTCTCAGTCTCTTGCGTTTATTACGACTTTCAAGGTTAATTAGATACATACATCAATG GGAAGAGGCTTTGGCAAAACAAGCCAAGATTGACTTTGAAGAACAATTCCTTAAAGAAAAGAGATTTCATGATCAGATTGCTGTGGAAAG AGCTCAAGCTCGTTATGAAAAGCATTATTCAGTATGTGCAGAAATTTTGGATCAAATAGTTGATTTGTCCACTAAAGTGGCAGACTATCG AATGTTGACAAATAATCTGATTCCGTATAAGTTGATGCATGATTGGAAGGAACTATTTTTTAATGCAAAACCCATATATGAACAAGCCTC TGTTAAGACACTACCTGCTAACCCCTCAAGAGAACAACTTACAGAACTGGAGAAAAGGGACTTGCTAGATACCAATGATTATGAAGAATA TAAGAACATGGTTGGAGAGTGGGCCTTACCAGAAGAAATGGTTGACAATTTACCACCCTCCAACAATTGCATACTGGGCCATATTCTTCA CAGGCTAGCTGAAAAATCTCTTCCTCCTCGAGCGGAATCAACAACACCTGAATTACCTTCATTTGCTGTTAAAGGATGCTTATTGGGGAA AACATTAAGTGGAAAAACTACCATTTTAAGGTCTCTACAAAAAGACTTTCCTATACAGATACTTTCTATTGACACTCTTGTCCAAGAAGC TATCCAAGCATTTCATGACAATGAAAAAGTCAGTGAGGTTCTACCAATTCAGAAAAATGATGAAGAAGATGCTCTACCAGTTCTGCAAGA GGAGATTAAAGAAAGCCAGGATCCACAACATGTATTTTCAGCTGGTCCAGTTTCAGATGAAGTATTACCAGAAACAGAAGGTGCTAATGC TGATAAAACACCAAAAGCTGAAGAAGTCAAATCAAGTGATAGTTTCTTAAAACTCACTACACGTGCTCAGCTTGGTGCAAAATCAGAACA GTTGCTGAAGAAAGGAAAGAGCATTCCTGATGTGCTGCTTGTTGACATCATAGTAAATGCTATTAATGAGATACCTGTGAATCAAGACTG TATCCTAGATGGTTTTCCAATGACTTTAAACCAAGCACAGCTTCTGGAAGAAGCTCTTACAGGCTGCAATAGAAACCTCACAGAAGTGGA AAGAAAAAAAGCACAAAAATCCACATTGGCTATTGATCCTGCGACTTCCAAAGAAATACCTCTTCCCTCTCCTGCATTTGATTTTGTCAT ATTATTAGATGTTTCAGATACTTCCTCAATGAGTCGCATGAATGATATTATAGCTGAAGAATTGTCCTATAAAACTGCTCACGAAGATAT CAGTCAACGTGTAGCTGCTGAAAACCAAGATAAGGATGGAGACCAAAATTTAAGAGACCAGATACAACATAGAATTATAGGCTTCTTGGA CAACTGGCCTTTATTGGAGCAATGGTTTTCAGAGCCAGAAAATATTTTGATAAAAATCAATGCTGAAATAGATAAGGAATCTTTATGTGA AAAAGTAAAAGAAATTCTTACGACTGAAATAGCAAAAAAAAAGAATAAAGTTGAGAAGAAATTAGAAGAAAAGGAAGCTGAGAAAAAAGC AGCAGCTTCCCTGGCTGAGCTTCCACTTCCTACACCTCCTCCTGCTCCTCCTCCTGAACCAGAAAAAGAGAAGGAAATTCATCAAAGCCA TGTGGCTTCAAAAACTCCTACTGCAAAAGGAAAACCTCAATCAGAAGCCCCGCATGGTAAGCAAGAATCTCTTCAGGAAGGAAAAGGGAA GAAAGGTGAGACCGCACTCAAAAGAAAAGGTTCTCCTAAAGGAAAATCATCAGGAGGAAAAGTACCAGTAAAGAAATCACCTGCTGACTC TACAGATACATCACCTGTTGCAATAGTGCCACAGCCACCTAAGCCAGGATCAGAAGAATGGGTCTATGTGAATGAACCAGTTCCTGAGGA AATGCCTTTGTTTTTAGTACCTTACTGGGAACTAATAGAAAATTCCTATATAAACACCATCAAAACAGTACTCAGGCATCTGAGGGAAGA CCAGCATACTGTGCTTGCTTACTTATATGAGATTAGAACAAGTTTCCAGGAGTTTCTAAAGCGTCCGGATCACAAGCAAGATTTTGTAGC TCAATGGCAGGCTGATTTCAACTCCCTTCCTGATGACCTGTGGGATGATGAGGAAACAAAGGCTGAACTACATCAACGAGTGAATGATCT GCGAGACCGCCTGTGGGACATTTGTGATGCCCGGAAGGAAGAGGCGGAGCAGGAGCGGCTTGACATCATTAATGAGAGCTGGTTACAGGA CACTCTTGGAATGACAATGAACCATTTCTTTTCCCTGATGCAGGCAGAGCTGAACCGTTTCCAAGATACAAAGAGACTCCTTCAAGATTA TTACTGGGGAATGGAAAGTAAAATCCCAGTAGAGGACAACAAGAGATTTACTCGAATCCCTTTGGTCCAACTGGATAGTAAAGACAATTC TGAAAGCCAGCTTAGAATTCCTCTAGTTCCTCGAATATCCATTTCTCTGGAAACAGTTACACCCAAACCAAAAACAAAATCAGTACTGAA GGGCAAGATGGATAACTCCCTAGAAAACGTTGAGTCCAACTTTGAGGCCGATGAAAAGTTGGTCATGGACACCTGGCAGCAGGCTTCTTT AGCAGTATCTCACATGGTGGCTGCTGAAATTCATCAGAGGCTTATGGAAGAAGAAAAAGAAAACCAGCCAGCAGACCCCAAAGAAAAATC TCCTCAGATGGGTGCAAATAAAAAAGTCAAAAAGGAGCCACCCAAGAAAAAACAGGAAGACAAAAAACCCAAAGGTAAATCACCACCTAT GGCAGAAGCAACTCCTGTCATAGTAACAACAGAGGAAATTGCTGAAATCAAAAGGAAAAATGAACTGAGGGTCAAAATAAAAGAAGAACA CCTTGCTGCCTTGCAATTTGAAGAAATAGCCACGCAATTTCGACTTGAACTGATAAAGACAAAAGCATTGGCTCTTCTTGAAGATTTAGT AACAAAGGTGGTTGATGTATATAAACTCATGGAAAAATGGCTTGGTGAGAGGTATTTGAATGAAATGGCCAGTACAGAAAAATTAACTGA CGTAGCTCGCTATCACATTGAAACATCTACAAAAATTCAGAATGAACTTTATTTAAGCCAAGAAGACTTCTTCATTAATGGCAATATAAA AGTCTTCCCAGATCCTCCCCCATCAATACGTCCTCCACCTGTAGAAAAGGAAGAAGATGGTACCCTGACCATTGAACAGCTTGACAGTCT TCGAGATCAGTTCTTAGATATGGCACCTAAAGGCATAATAGGAAATAAAGCATTTACTGACATTCTGATCGATTTGGTGACCCTGAACCT TGGCACAAACAACTTTCCTAGTAATTGGATGCACCTTACCCAACCTGAATTACAGGAATTAACATCTTTATTAACAGTCAACTCCGAGTT CGTGGACTGGCGGAAGTTCCTGTTAGTAACCTCAATGCCTTGGCCCATTCCCTTGGAGGAGGAGCTCCTTGAGACCCTTCAGAAGTTCAA GGCTGTGGATAAGGAGCAGTTGGGCACCATCACTTTTGAGCAGTATATGCAGGCTGGTCTGTGGTTTACAGGAGATGAAGATATAAAAAT TCCAGAAAATCCTCTTGAACCCCTTCCATTTAATAGGCAGGAGCATCTTATAGAGTTTTTCTTTAGGCTATTTGCTGACTATGAGAAGGA TCCACCCCAGCTTGACTACACACAGATGCTGCTTTACTTTGCTTGCCACCCAGACACCGTGGAAGGAGTCTACAGGGCCCTCAGTGTGGC TGTTGGAACTCATGTCTTCCAACAAGTCAAAGCTTCCATTCCAAGTGCAGAAAAGACCTCCTCAACTGATGCAGGTCCAGCTGAGGAATT TCCTGAACCTGAGGAAAATGCTGCAAGAGAAGAAAGGAAATTAAAAGACGACACGGAGAAAAGGGAACAGAAGGATGAAGAAATCCCTGA AAATGCAAACAATGAAAAGATGTCCATGGAAACACTACTCAAAGTGTTCAAAGGGGGAAGTGAAGCACAGGACTCCAATAGATTTGCCAG CCACCTAAAGATAGAGAACATTTATGCAGAGGGCTTCATAAAAACATTTCAAGACCTAGGTGCCAAGAACCTGGAGCCAATTGAAGTCGC TGTTCTCTTGAAGCATCCTTTTATTCAAGACCTGATTTCAAATTATTCAGACTATAAGTTTCCTGTACACATCATCTATGTAGTGGAAAT GATAGTGTGTGCAAAAGGTTGGGCACCACTTCCATCAGGAAAACAGTGTGCAAGATGGAGAAACTAAGGACAAACCCCAGAGAAACTGGA CAAACCCAGCAGAAGAAAGGAAGAACTGCAACTCAGAAATCACATAACCACCAAGCAGGTCTGGACCACACATGCTAAATGTGCATCCAC TATGGCGAGTCCCAGGCCTTTAACAGCAGGGACTAAGGAGGGCAGAGGCTGACACCAACCCCCTTTCATACTGTAGCACTACATCCCTCT CAGATACCAGTTTAACACGAAGTCTCCCTGTTTGACTCCTGTGAGTTGTGTATTGAACTACAAAGTGTTTGCTGAGTTGAAAATAAAAGC GCTTTCACTTTGATAGAATGTAGATTGTGTATCTTGACTTCTCAATGATAGCAAGTTACATTTTGCAGTTTTCTTCCTATACCCACAAAT GAAACTATTCAGACTTAAATATCTTCCTGTGTGCCTAAACGTTTTTGTTCTAAGTTGCTGATCCTTTTAAATATTAAATTATTAATTAAT |
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FusionGenePPI for HCN1_SPEF2 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
HCN1 | HCN2, HCN3, HCN4, HCN1, NEDD4L | SPEF2 | APOA1, TSC22D2 |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for HCN1_SPEF2 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for HCN1_SPEF2 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | HCN1 | C0011581 | Depressive disorder | 2 | PSYGENET |
Hgene | HCN1 | C0004134 | Ataxia | 1 | CTD_human |
Hgene | HCN1 | C0011570 | Mental Depression | 1 | PSYGENET |
Hgene | HCN1 | C0014544 | Epilepsy | 1 | CTD_human |
Hgene | HCN1 | C0036572 | Seizures | 1 | CTD_human |
Hgene | HCN1 | C3463992 | EPILEPTIC ENCEPHALOPATHY, EARLY INFANTILE, 1 | 1 | CTD_human |
Hgene | HCN1 | C4014531 | EPILEPTIC ENCEPHALOPATHY, EARLY INFANTILE, 24 | 1 | UNIPROT |