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Center for Computational Systems Medicine
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FusionGeneSummary

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FusionProtFeature

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FusionGeneSequence

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FusionGenePPI

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Fusion gene ID: 15662

FusionGeneSummary for GTF3C4_LMX1B

check button Fusion gene summary
Fusion gene informationFusion gene name: GTF3C4_LMX1B
Fusion gene ID: 15662
HgeneTgene
Gene symbol

GTF3C4

LMX1B

Gene ID

9329

4010

Gene namegeneral transcription factor IIIC subunit 4LIM homeobox transcription factor 1 beta
SynonymsKAT12|TF3C-delta|TFIII90|TFIIIC290|TFIIIC90|TFIIICDELTALMX1.2|NPS1
Cytomap

9q34.13

9q33.3

Type of geneprotein-codingprotein-coding
Descriptiongeneral transcription factor 3C polypeptide 4TFIIIC 90 kDa subunitgeneral transcription factor 3C 4general transcription factor IIIC, polypeptide 4, 90kDatranscription factor IIIC 90 kDa subunittranscription factor IIIC subunit deltaLIM homeobox transcription factor 1-betaLIM/homeobox protein 1.2LMX-1.2
Modification date2018052320180519
UniProtAcc

Q9UKN8

O60663

Ensembl transtripts involved in fusion geneENST00000483873, ENST00000372146, 
ENST00000526117, ENST00000373474, 
ENST00000425646, ENST00000355497, 
ENST00000561065, 
Fusion gene scores* DoF score2 X 2 X 2=84 X 1 X 2=8
# samples 24
** MAII scorelog2(2/8*10)=1.32192809488736log2(4/8*10)=2.32192809488736
Context

PubMed: GTF3C4 [Title/Abstract] AND LMX1B [Title/Abstract] AND fusion [Title/Abstract]

Functional or gene categories assigned by FusionGDB annotation
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
TgeneLMX1B

GO:0006355

regulation of transcription, DNA-templated

10767331


check button Fusion gene information from three resources
(ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018))
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
Data typeSourceCancer typeSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
TCGALDBRCATCGA-BH-A0BP-01AGTF3C4chr9

135559080

+LMX1Bchr9

129453115

+
* LD: Li Ding group's fusion gene list
  RV: Roel Verhaak group's fusion gene list
  ChiTaRs fusion database

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
intron-3CDSENST00000483873ENST00000526117GTF3C4chr9

135559080

+LMX1Bchr9

129453115

+
intron-3CDSENST00000483873ENST00000373474GTF3C4chr9

135559080

+LMX1Bchr9

129453115

+
intron-3CDSENST00000483873ENST00000425646GTF3C4chr9

135559080

+LMX1Bchr9

129453115

+
intron-3CDSENST00000483873ENST00000355497GTF3C4chr9

135559080

+LMX1Bchr9

129453115

+
intron-3CDSENST00000483873ENST00000561065GTF3C4chr9

135559080

+LMX1Bchr9

129453115

+
In-frameENST00000372146ENST00000526117GTF3C4chr9

135559080

+LMX1Bchr9

129453115

+
In-frameENST00000372146ENST00000373474GTF3C4chr9

135559080

+LMX1Bchr9

129453115

+
In-frameENST00000372146ENST00000425646GTF3C4chr9

135559080

+LMX1Bchr9

129453115

+
In-frameENST00000372146ENST00000355497GTF3C4chr9

135559080

+LMX1Bchr9

129453115

+
In-frameENST00000372146ENST00000561065GTF3C4chr9

135559080

+LMX1Bchr9

129453115

+

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FusionProtFeatures for GTF3C4_LMX1B


check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
GTF3C4

Q9UKN8

LMX1B

O60663

Essential for RNA polymerase III to make a number ofsmall nuclear and cytoplasmic RNAs, including 5S RNA, tRNA, andadenovirus-associated (VA) RNA of both cellular and viral origin.Has histone acetyltransferase activity (HAT) with uniquespecificity for free and nucleosomal H3. May cooperate with GTF3C5in facilitating the recruitment of TFIIIB and RNA polymerasethrough direct interactions with BRF1, POLR3C and POLR3F. May belocalized close to the A box. Essential for the specification of dorsal limb fate atboth the zeugopodal and autopodal levels.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page

.

* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note


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FusionGeneSequence for GTF3C4_LMX1B


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences.
(nt: nucleotides, aa: amino acids)

* Fusion amino acid sequences.
>In-frame_GTF3C4_ENST00000372146_chr9_135559080_+_LMX1B_ENST00000526117_chr9_129453115_+_1059aa
MNTADQARVGPADDGPAPSGEEEGEGGGEAGGKEPAADAAPGPSAAFRLMVTRREPAVKLQYAVSGLEPLAWSEDHRVSVSTARSIAVLE
LICDVHNPGQDLVIHRTSVPAPLNSCLLKVGSKTEVAECKEKFAASKDPTVSQTFMLDRVFNPEGKALPPMRGFKYTSWSPMGCDANGRC
LLAALTMDNRLTIQANLNRLQWVQLVDLTEIYGERLYETSYRLSKNEAPEGNLGDFAEFQRRHSMQTPVRMEWSGICTTQQVKHNNECRD
VGSVLLAVLFENGNIAVWQFQLPFVGKESISSCNTIESGITSPSVLFWWEYEHNNRKMSGLIVGSAFGPIKILPVNLKAVKGYFTLRQPV
ILWKEMDQLPVHSIKCVPLYHPYQKCSCSLVVAARGSYVFWCLLLISKAGLNVHNSHVTGLHSLPIVSMTADKQNGTVYTCSSDGKVRQL
IPIFTDVALKFEHQLIKLSDVFGSVRTHGIAVSPCGAYLAIITTEGMINGLHPVNKNYQVQFVTLKTFEEAAAQLLESSVQNLFKQVDLI
DLVRWKILKDKHIPQFLQEALEKKIESSGVTYFWRFKLFLLRILYQSMQKTPSEALWKPTHEDSKILLVDSPGMGNADDEQQEEGTSSKQ
VVKQGLQERSKEGDVEEPTDDSLPTTGDAGGREPMEEKLLEIQGKIEAVEMHLTREHMKRVLGEVYLHTWITENTSIPTRGLCNFLMSDE
EYDDRTARVLIGHISKKMNKQTFPEHCSLCKEILPFTDRKQAVCSNGHIWLRLFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCE
RQLRKGDEFVLKEGQLLCKGDYEKEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKAS
FEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRHQQQQEQQNSQRLGQEVLSSRMEGMMASYTPLAPPQQQIVAMEQSPY

>In-frame_GTF3C4_ENST00000372146_chr9_135559080_+_LMX1B_ENST00000373474_chr9_129453115_+_1066aa
MNTADQARVGPADDGPAPSGEEEGEGGGEAGGKEPAADAAPGPSAAFRLMVTRREPAVKLQYAVSGLEPLAWSEDHRVSVSTARSIAVLE
LICDVHNPGQDLVIHRTSVPAPLNSCLLKVGSKTEVAECKEKFAASKDPTVSQTFMLDRVFNPEGKALPPMRGFKYTSWSPMGCDANGRC
LLAALTMDNRLTIQANLNRLQWVQLVDLTEIYGERLYETSYRLSKNEAPEGNLGDFAEFQRRHSMQTPVRMEWSGICTTQQVKHNNECRD
VGSVLLAVLFENGNIAVWQFQLPFVGKESISSCNTIESGITSPSVLFWWEYEHNNRKMSGLIVGSAFGPIKILPVNLKAVKGYFTLRQPV
ILWKEMDQLPVHSIKCVPLYHPYQKCSCSLVVAARGSYVFWCLLLISKAGLNVHNSHVTGLHSLPIVSMTADKQNGTVYTCSSDGKVRQL
IPIFTDVALKFEHQLIKLSDVFGSVRTHGIAVSPCGAYLAIITTEGMINGLHPVNKNYQVQFVTLKTFEEAAAQLLESSVQNLFKQVDLI
DLVRWKILKDKHIPQFLQEALEKKIESSGVTYFWRFKLFLLRILYQSMQKTPSEALWKPTHEDSKILLVDSPGMGNADDEQQEEGTSSKQ
VVKQGLQERSKEGDVEEPTDDSLPTTGDAGGREPMEEKLLEIQGKIEAVEMHLTREHMKRVLGEVYLHTWITENTSIPTRGLCNFLMSDE
EYDDRTARVLIGHISKKMNKQTFPEHCSLCKEILPFTDRKQAVCSNGHIWLRLFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCE
RQLRKGDEFVLKEGQLLCKGDYEKEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKAS
FEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRHQQQQEQQNSQRLGQEVLSSRMEGMMASYTPLAPPQQQIVAMEQSPY

>In-frame_GTF3C4_ENST00000372146_chr9_135559080_+_LMX1B_ENST00000425646_chr9_129453115_+_1059aa
MNTADQARVGPADDGPAPSGEEEGEGGGEAGGKEPAADAAPGPSAAFRLMVTRREPAVKLQYAVSGLEPLAWSEDHRVSVSTARSIAVLE
LICDVHNPGQDLVIHRTSVPAPLNSCLLKVGSKTEVAECKEKFAASKDPTVSQTFMLDRVFNPEGKALPPMRGFKYTSWSPMGCDANGRC
LLAALTMDNRLTIQANLNRLQWVQLVDLTEIYGERLYETSYRLSKNEAPEGNLGDFAEFQRRHSMQTPVRMEWSGICTTQQVKHNNECRD
VGSVLLAVLFENGNIAVWQFQLPFVGKESISSCNTIESGITSPSVLFWWEYEHNNRKMSGLIVGSAFGPIKILPVNLKAVKGYFTLRQPV
ILWKEMDQLPVHSIKCVPLYHPYQKCSCSLVVAARGSYVFWCLLLISKAGLNVHNSHVTGLHSLPIVSMTADKQNGTVYTCSSDGKVRQL
IPIFTDVALKFEHQLIKLSDVFGSVRTHGIAVSPCGAYLAIITTEGMINGLHPVNKNYQVQFVTLKTFEEAAAQLLESSVQNLFKQVDLI
DLVRWKILKDKHIPQFLQEALEKKIESSGVTYFWRFKLFLLRILYQSMQKTPSEALWKPTHEDSKILLVDSPGMGNADDEQQEEGTSSKQ
VVKQGLQERSKEGDVEEPTDDSLPTTGDAGGREPMEEKLLEIQGKIEAVEMHLTREHMKRVLGEVYLHTWITENTSIPTRGLCNFLMSDE
EYDDRTARVLIGHISKKMNKQTFPEHCSLCKEILPFTDRKQAVCSNGHIWLRLFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCE
RQLRKGDEFVLKEGQLLCKGDYEKEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKAS
FEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRHQQQQEQQNSQRLGQEVLSSRMEGMMASYTPLAPPQQQIVAMEQSPY

>In-frame_GTF3C4_ENST00000372146_chr9_135559080_+_LMX1B_ENST00000355497_chr9_129453115_+_1070aa
MNTADQARVGPADDGPAPSGEEEGEGGGEAGGKEPAADAAPGPSAAFRLMVTRREPAVKLQYAVSGLEPLAWSEDHRVSVSTARSIAVLE
LICDVHNPGQDLVIHRTSVPAPLNSCLLKVGSKTEVAECKEKFAASKDPTVSQTFMLDRVFNPEGKALPPMRGFKYTSWSPMGCDANGRC
LLAALTMDNRLTIQANLNRLQWVQLVDLTEIYGERLYETSYRLSKNEAPEGNLGDFAEFQRRHSMQTPVRMEWSGICTTQQVKHNNECRD
VGSVLLAVLFENGNIAVWQFQLPFVGKESISSCNTIESGITSPSVLFWWEYEHNNRKMSGLIVGSAFGPIKILPVNLKAVKGYFTLRQPV
ILWKEMDQLPVHSIKCVPLYHPYQKCSCSLVVAARGSYVFWCLLLISKAGLNVHNSHVTGLHSLPIVSMTADKQNGTVYTCSSDGKVRQL
IPIFTDVALKFEHQLIKLSDVFGSVRTHGIAVSPCGAYLAIITTEGMINGLHPVNKNYQVQFVTLKTFEEAAAQLLESSVQNLFKQVDLI
DLVRWKILKDKHIPQFLQEALEKKIESSGVTYFWRFKLFLLRILYQSMQKTPSEALWKPTHEDSKILLVDSPGMGNADDEQQEEGTSSKQ
VVKQGLQERSKEGDVEEPTDDSLPTTGDAGGREPMEEKLLEIQGKIEAVEMHLTREHMKRVLGEVYLHTWITENTSIPTRGLCNFLMSDE
EYDDRTARVLIGHISKKMNKQTFPEHCSLCKEILPFTDRKQAVCSNGHIWLRLFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCE
RQLRKGDEFVLKEGQLLCKGDYEKEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKAS
FEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRHQQQQEQQNSQRLGQGEPGPGQGLGQEVLSSRMEGMMASYTPLAPPQ

>In-frame_GTF3C4_ENST00000372146_chr9_135559080_+_LMX1B_ENST00000561065_chr9_129453115_+_1070aa
MNTADQARVGPADDGPAPSGEEEGEGGGEAGGKEPAADAAPGPSAAFRLMVTRREPAVKLQYAVSGLEPLAWSEDHRVSVSTARSIAVLE
LICDVHNPGQDLVIHRTSVPAPLNSCLLKVGSKTEVAECKEKFAASKDPTVSQTFMLDRVFNPEGKALPPMRGFKYTSWSPMGCDANGRC
LLAALTMDNRLTIQANLNRLQWVQLVDLTEIYGERLYETSYRLSKNEAPEGNLGDFAEFQRRHSMQTPVRMEWSGICTTQQVKHNNECRD
VGSVLLAVLFENGNIAVWQFQLPFVGKESISSCNTIESGITSPSVLFWWEYEHNNRKMSGLIVGSAFGPIKILPVNLKAVKGYFTLRQPV
ILWKEMDQLPVHSIKCVPLYHPYQKCSCSLVVAARGSYVFWCLLLISKAGLNVHNSHVTGLHSLPIVSMTADKQNGTVYTCSSDGKVRQL
IPIFTDVALKFEHQLIKLSDVFGSVRTHGIAVSPCGAYLAIITTEGMINGLHPVNKNYQVQFVTLKTFEEAAAQLLESSVQNLFKQVDLI
DLVRWKILKDKHIPQFLQEALEKKIESSGVTYFWRFKLFLLRILYQSMQKTPSEALWKPTHEDSKILLVDSPGMGNADDEQQEEGTSSKQ
VVKQGLQERSKEGDVEEPTDDSLPTTGDAGGREPMEEKLLEIQGKIEAVEMHLTREHMKRVLGEVYLHTWITENTSIPTRGLCNFLMSDE
EYDDRTARVLIGHISKKMNKQTFPEHCSLCKEILPFTDRKQAVCSNGHIWLRLFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCE
RQLRKGDEFVLKEGQLLCKGDYEKEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKAS
FEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRHQQQQEQQNSQRLGQGEPGPGQGLGQEVLSSRMEGMMASYTPLAPPQ


* Fusion transcript sequences (only coding sequence (CDS) region).
>In-frame_GTF3C4_ENST00000372146_chr9_135559080_+_LMX1B_ENST00000526117_chr9_129453115_+_3177nt
ATGAACACGGCCGACCAGGCCCGGGTGGGGCCCGCGGACGACGGGCCTGCGCCGTCTGGGGAGGAGGAGGGAGAGGGGGGCGGCGAGGCG
GGCGGGAAGGAGCCAGCAGCGGACGCGGCCCCGGGGCCCAGCGCTGCATTCCGCCTCATGGTGACTCGGCGGGAGCCGGCCGTGAAGCTG
CAGTATGCGGTGAGCGGCCTGGAACCGCTGGCTTGGTCCGAGGACCACCGCGTGTCTGTGTCCACGGCCCGCAGCATCGCTGTGCTGGAG
CTCATCTGCGACGTGCACAACCCGGGCCAGGACCTGGTTATCCACCGCACCTCGGTGCCCGCACCGCTCAACAGCTGTCTCCTCAAAGTT
GGCTCAAAAACAGAAGTTGCTGAGTGCAAGGAGAAATTCGCCGCCTCCAAGGACCCCACGGTCAGTCAGACTTTCATGTTGGATAGGGTG
TTCAACCCTGAGGGGAAGGCTTTACCACCAATGAGAGGATTCAAGTACACCAGCTGGTCTCCCATGGGTTGCGATGCTAATGGCAGGTGC
CTCTTGGCAGCACTGACCATGGACAATCGCCTGACCATCCAGGCAAATCTCAACAGACTGCAGTGGGTCCAGCTGGTTGACCTGACTGAG
ATCTATGGAGAACGTCTTTATGAGACCAGTTACAGGCTCTCTAAAAATGAGGCCCCGGAAGGAAATCTCGGGGATTTTGCTGAGTTTCAG
AGGAGACACAGCATGCAGACCCCAGTCAGAATGGAGTGGTCGGGCATCTGTACCACCCAGCAGGTCAAGCATAACAACGAATGCCGGGAC
GTTGGCAGTGTGCTCCTGGCTGTCCTCTTTGAAAACGGTAATATCGCCGTGTGGCAGTTTCAGCTGCCGTTTGTAGGAAAAGAATCCATC
TCTTCATGCAACACAATTGAGTCAGGAATCACCTCTCCCAGTGTATTGTTTTGGTGGGAATATGAGCACAATAATCGAAAAATGAGTGGC
CTTATTGTGGGGAGTGCTTTTGGACCCATAAAAATTCTTCCTGTCAATCTCAAAGCAGTCAAAGGCTATTTCACTTTAAGGCAGCCTGTT
ATCTTGTGGAAAGAAATGGACCAGTTACCTGTGCACAGTATCAAATGTGTGCCACTTTATCATCCTTACCAGAAGTGTAGTTGCAGCTTA
GTAGTGGCTGCAAGAGGCTCTTATGTATTTTGGTGTCTTCTTCTGATCTCCAAAGCAGGGCTGAATGTTCACAATTCCCATGTCACAGGC
CTTCACTCACTGCCAATTGTCTCCATGACTGCAGACAAACAGAATGGAACAGTCTATACTTGCTCCAGTGACGGAAAGGTGAGGCAGCTG
ATTCCCATTTTCACAGATGTTGCATTGAAGTTTGAACACCAGTTGATTAAACTCTCAGATGTGTTTGGCTCAGTGAGGACTCACGGGATA
GCAGTGAGCCCCTGCGGTGCATACCTGGCCATCATCACCACTGAGGGCATGATCAACGGCCTCCACCCTGTTAACAAAAACTACCAGGTC
CAATTTGTTACTCTCAAAACCTTTGAAGAGGCAGCTGCTCAGCTCCTGGAATCTTCAGTTCAAAACCTTTTTAAGCAGGTAGATTTAATA
GACCTAGTACGCTGGAAGATTTTAAAAGATAAACATATCCCTCAATTTTTACAAGAAGCTTTGGAAAAAAAGATTGAAAGCAGTGGAGTC
ACCTATTTTTGGCGTTTTAAGCTTTTCCTCCTGAGGATTTTATATCAGTCAATGCAGAAAACCCCTTCAGAAGCCTTGTGGAAACCCACC
CATGAGGACTCAAAAATCTTACTAGTGGATTCGCCTGGGATGGGCAATGCTGACGATGAACAGCAGGAAGAAGGCACTTCTTCCAAACAG
GTGGTGAAGCAAGGCCTGCAGGAGAGGAGCAAGGAAGGAGATGTAGAGGAGCCCACTGATGACTCGCTCCCCACGACTGGAGATGCTGGA
GGCCGTGAGCCAATGGAAGAGAAACTCCTGGAAATCCAAGGGAAAATCGAAGCTGTGGAGATGCACTTGACCAGGGAACACATGAAGCGA
GTCTTAGGAGAAGTGTATCTGCACACCTGGATCACAGAAAACACTAGCATCCCCACCCGCGGACTCTGTAACTTTTTAATGTCTGATGAA
GAGTATGATGACAGAACTGCACGGGTGCTGATTGGACATATCTCAAAGAAGATGAACAAACAGACTTTCCCTGAGCACTGTAGTTTGTGT
AAAGAGATCTTGCCATTCACAGATCGCAAACAGGCAGTCTGTTCCAATGGCCACATTTGGCTCCGGCTCTTCGCGGCCAAGTGCAGCGGC
TGCATGGAGAAGATCGCCCCCACCGAGTTCGTGATGCGGGCGCTGGAGTGCGTGTACCACCTGGGCTGCTTCTGCTGCTGCGTGTGTGAA
CGGCAGCTACGCAAGGGCGACGAATTCGTGCTCAAGGAGGGCCAGCTGCTGTGCAAGGGTGACTACGAGAAGGAGAAGGACCTGCTCAGC
TCCGTGAGCCCCGACGAGTCCGACTCCGTGAAGAGCGAGGATGAAGATGGGGACATGAAGCCGGCCAAGGGGCAGGGCAGTCAGAGCAAG
GGCAGCGGGGATGACGGGAAGGACCCGCGGAGGCCCAAGCGACCCCGGACCATCCTCACCACGCAGCAGCGAAGAGCCTTCAAGGCCTCC
TTCGAGGTCTCGTCGAAGCCTTGCCGAAAGGTCCGAGAGACACTGGCAGCTGAGACGGGCCTCAGTGTGCGCGTGGTCCAGGTCTGGTTT
CAGAACCAAAGAGCAAAGATGAAGAAGCTGGCGCGGCGGCACCAGCAGCAGCAGGAGCAGCAGAACTCCCAGCGGCTGGGCCAGGAGGTC
CTGTCCAGCCGCATGGAGGGCATGATGGCTTCCTACACGCCGCTGGCCCCACCACAGCAGCAGATCGTGGCCATGGAACAGAGCCCCTAC
GGCAGCAGCGACCCCTTCCAGCAGGGCCTCACGCCGCCCCAAATGCCAGGGAACGACTCCATCTTCCATGACATCGACAGCGATACCTCC
TTAACCAGCCTCAGCGACTGCTTCCTCGGCTCCTCAGACGTGGGCTCCCTGCAGGCCCGCGTGGGGAACCCCATCGACCGGCTCTACTCC

>In-frame_GTF3C4_ENST00000372146_chr9_135559080_+_LMX1B_ENST00000373474_chr9_129453115_+_3198nt
ATGAACACGGCCGACCAGGCCCGGGTGGGGCCCGCGGACGACGGGCCTGCGCCGTCTGGGGAGGAGGAGGGAGAGGGGGGCGGCGAGGCG
GGCGGGAAGGAGCCAGCAGCGGACGCGGCCCCGGGGCCCAGCGCTGCATTCCGCCTCATGGTGACTCGGCGGGAGCCGGCCGTGAAGCTG
CAGTATGCGGTGAGCGGCCTGGAACCGCTGGCTTGGTCCGAGGACCACCGCGTGTCTGTGTCCACGGCCCGCAGCATCGCTGTGCTGGAG
CTCATCTGCGACGTGCACAACCCGGGCCAGGACCTGGTTATCCACCGCACCTCGGTGCCCGCACCGCTCAACAGCTGTCTCCTCAAAGTT
GGCTCAAAAACAGAAGTTGCTGAGTGCAAGGAGAAATTCGCCGCCTCCAAGGACCCCACGGTCAGTCAGACTTTCATGTTGGATAGGGTG
TTCAACCCTGAGGGGAAGGCTTTACCACCAATGAGAGGATTCAAGTACACCAGCTGGTCTCCCATGGGTTGCGATGCTAATGGCAGGTGC
CTCTTGGCAGCACTGACCATGGACAATCGCCTGACCATCCAGGCAAATCTCAACAGACTGCAGTGGGTCCAGCTGGTTGACCTGACTGAG
ATCTATGGAGAACGTCTTTATGAGACCAGTTACAGGCTCTCTAAAAATGAGGCCCCGGAAGGAAATCTCGGGGATTTTGCTGAGTTTCAG
AGGAGACACAGCATGCAGACCCCAGTCAGAATGGAGTGGTCGGGCATCTGTACCACCCAGCAGGTCAAGCATAACAACGAATGCCGGGAC
GTTGGCAGTGTGCTCCTGGCTGTCCTCTTTGAAAACGGTAATATCGCCGTGTGGCAGTTTCAGCTGCCGTTTGTAGGAAAAGAATCCATC
TCTTCATGCAACACAATTGAGTCAGGAATCACCTCTCCCAGTGTATTGTTTTGGTGGGAATATGAGCACAATAATCGAAAAATGAGTGGC
CTTATTGTGGGGAGTGCTTTTGGACCCATAAAAATTCTTCCTGTCAATCTCAAAGCAGTCAAAGGCTATTTCACTTTAAGGCAGCCTGTT
ATCTTGTGGAAAGAAATGGACCAGTTACCTGTGCACAGTATCAAATGTGTGCCACTTTATCATCCTTACCAGAAGTGTAGTTGCAGCTTA
GTAGTGGCTGCAAGAGGCTCTTATGTATTTTGGTGTCTTCTTCTGATCTCCAAAGCAGGGCTGAATGTTCACAATTCCCATGTCACAGGC
CTTCACTCACTGCCAATTGTCTCCATGACTGCAGACAAACAGAATGGAACAGTCTATACTTGCTCCAGTGACGGAAAGGTGAGGCAGCTG
ATTCCCATTTTCACAGATGTTGCATTGAAGTTTGAACACCAGTTGATTAAACTCTCAGATGTGTTTGGCTCAGTGAGGACTCACGGGATA
GCAGTGAGCCCCTGCGGTGCATACCTGGCCATCATCACCACTGAGGGCATGATCAACGGCCTCCACCCTGTTAACAAAAACTACCAGGTC
CAATTTGTTACTCTCAAAACCTTTGAAGAGGCAGCTGCTCAGCTCCTGGAATCTTCAGTTCAAAACCTTTTTAAGCAGGTAGATTTAATA
GACCTAGTACGCTGGAAGATTTTAAAAGATAAACATATCCCTCAATTTTTACAAGAAGCTTTGGAAAAAAAGATTGAAAGCAGTGGAGTC
ACCTATTTTTGGCGTTTTAAGCTTTTCCTCCTGAGGATTTTATATCAGTCAATGCAGAAAACCCCTTCAGAAGCCTTGTGGAAACCCACC
CATGAGGACTCAAAAATCTTACTAGTGGATTCGCCTGGGATGGGCAATGCTGACGATGAACAGCAGGAAGAAGGCACTTCTTCCAAACAG
GTGGTGAAGCAAGGCCTGCAGGAGAGGAGCAAGGAAGGAGATGTAGAGGAGCCCACTGATGACTCGCTCCCCACGACTGGAGATGCTGGA
GGCCGTGAGCCAATGGAAGAGAAACTCCTGGAAATCCAAGGGAAAATCGAAGCTGTGGAGATGCACTTGACCAGGGAACACATGAAGCGA
GTCTTAGGAGAAGTGTATCTGCACACCTGGATCACAGAAAACACTAGCATCCCCACCCGCGGACTCTGTAACTTTTTAATGTCTGATGAA
GAGTATGATGACAGAACTGCACGGGTGCTGATTGGACATATCTCAAAGAAGATGAACAAACAGACTTTCCCTGAGCACTGTAGTTTGTGT
AAAGAGATCTTGCCATTCACAGATCGCAAACAGGCAGTCTGTTCCAATGGCCACATTTGGCTCCGGCTCTTCGCGGCCAAGTGCAGCGGC
TGCATGGAGAAGATCGCCCCCACCGAGTTCGTGATGCGGGCGCTGGAGTGCGTGTACCACCTGGGCTGCTTCTGCTGCTGCGTGTGTGAA
CGGCAGCTACGCAAGGGCGACGAATTCGTGCTCAAGGAGGGCCAGCTGCTGTGCAAGGGTGACTACGAGAAGGAGAAGGACCTGCTCAGC
TCCGTGAGCCCCGACGAGTCCGACTCCGTGAAGAGCGAGGATGAAGATGGGGACATGAAGCCGGCCAAGGGGCAGGGCAGTCAGAGCAAG
GGCAGCGGGGATGACGGGAAGGACCCGCGGAGGCCCAAGCGACCCCGGACCATCCTCACCACGCAGCAGCGAAGAGCCTTCAAGGCCTCC
TTCGAGGTCTCGTCGAAGCCTTGCCGAAAGGTCCGAGAGACACTGGCAGCTGAGACGGGCCTCAGTGTGCGCGTGGTCCAGGTCTGGTTT
CAGAACCAAAGAGCAAAGATGAAGAAGCTGGCGCGGCGGCACCAGCAGCAGCAGGAGCAGCAGAACTCCCAGCGGCTGGGCCAGGAGGTC
CTGTCCAGCCGCATGGAGGGCATGATGGCTTCCTACACGCCGCTGGCCCCACCACAGCAGCAGATCGTGGCCATGGAACAGAGCCCCTAC
GGCAGCAGCGACCCCTTCCAGCAGGGCCTCACGCCGCCCCAAATGCCAGGTGACCACATGAACCCCTATGGGAACGACTCCATCTTCCAT
GACATCGACAGCGATACCTCCTTAACCAGCCTCAGCGACTGCTTCCTCGGCTCCTCAGACGTGGGCTCCCTGCAGGCCCGCGTGGGGAAC

>In-frame_GTF3C4_ENST00000372146_chr9_135559080_+_LMX1B_ENST00000425646_chr9_129453115_+_3177nt
ATGAACACGGCCGACCAGGCCCGGGTGGGGCCCGCGGACGACGGGCCTGCGCCGTCTGGGGAGGAGGAGGGAGAGGGGGGCGGCGAGGCG
GGCGGGAAGGAGCCAGCAGCGGACGCGGCCCCGGGGCCCAGCGCTGCATTCCGCCTCATGGTGACTCGGCGGGAGCCGGCCGTGAAGCTG
CAGTATGCGGTGAGCGGCCTGGAACCGCTGGCTTGGTCCGAGGACCACCGCGTGTCTGTGTCCACGGCCCGCAGCATCGCTGTGCTGGAG
CTCATCTGCGACGTGCACAACCCGGGCCAGGACCTGGTTATCCACCGCACCTCGGTGCCCGCACCGCTCAACAGCTGTCTCCTCAAAGTT
GGCTCAAAAACAGAAGTTGCTGAGTGCAAGGAGAAATTCGCCGCCTCCAAGGACCCCACGGTCAGTCAGACTTTCATGTTGGATAGGGTG
TTCAACCCTGAGGGGAAGGCTTTACCACCAATGAGAGGATTCAAGTACACCAGCTGGTCTCCCATGGGTTGCGATGCTAATGGCAGGTGC
CTCTTGGCAGCACTGACCATGGACAATCGCCTGACCATCCAGGCAAATCTCAACAGACTGCAGTGGGTCCAGCTGGTTGACCTGACTGAG
ATCTATGGAGAACGTCTTTATGAGACCAGTTACAGGCTCTCTAAAAATGAGGCCCCGGAAGGAAATCTCGGGGATTTTGCTGAGTTTCAG
AGGAGACACAGCATGCAGACCCCAGTCAGAATGGAGTGGTCGGGCATCTGTACCACCCAGCAGGTCAAGCATAACAACGAATGCCGGGAC
GTTGGCAGTGTGCTCCTGGCTGTCCTCTTTGAAAACGGTAATATCGCCGTGTGGCAGTTTCAGCTGCCGTTTGTAGGAAAAGAATCCATC
TCTTCATGCAACACAATTGAGTCAGGAATCACCTCTCCCAGTGTATTGTTTTGGTGGGAATATGAGCACAATAATCGAAAAATGAGTGGC
CTTATTGTGGGGAGTGCTTTTGGACCCATAAAAATTCTTCCTGTCAATCTCAAAGCAGTCAAAGGCTATTTCACTTTAAGGCAGCCTGTT
ATCTTGTGGAAAGAAATGGACCAGTTACCTGTGCACAGTATCAAATGTGTGCCACTTTATCATCCTTACCAGAAGTGTAGTTGCAGCTTA
GTAGTGGCTGCAAGAGGCTCTTATGTATTTTGGTGTCTTCTTCTGATCTCCAAAGCAGGGCTGAATGTTCACAATTCCCATGTCACAGGC
CTTCACTCACTGCCAATTGTCTCCATGACTGCAGACAAACAGAATGGAACAGTCTATACTTGCTCCAGTGACGGAAAGGTGAGGCAGCTG
ATTCCCATTTTCACAGATGTTGCATTGAAGTTTGAACACCAGTTGATTAAACTCTCAGATGTGTTTGGCTCAGTGAGGACTCACGGGATA
GCAGTGAGCCCCTGCGGTGCATACCTGGCCATCATCACCACTGAGGGCATGATCAACGGCCTCCACCCTGTTAACAAAAACTACCAGGTC
CAATTTGTTACTCTCAAAACCTTTGAAGAGGCAGCTGCTCAGCTCCTGGAATCTTCAGTTCAAAACCTTTTTAAGCAGGTAGATTTAATA
GACCTAGTACGCTGGAAGATTTTAAAAGATAAACATATCCCTCAATTTTTACAAGAAGCTTTGGAAAAAAAGATTGAAAGCAGTGGAGTC
ACCTATTTTTGGCGTTTTAAGCTTTTCCTCCTGAGGATTTTATATCAGTCAATGCAGAAAACCCCTTCAGAAGCCTTGTGGAAACCCACC
CATGAGGACTCAAAAATCTTACTAGTGGATTCGCCTGGGATGGGCAATGCTGACGATGAACAGCAGGAAGAAGGCACTTCTTCCAAACAG
GTGGTGAAGCAAGGCCTGCAGGAGAGGAGCAAGGAAGGAGATGTAGAGGAGCCCACTGATGACTCGCTCCCCACGACTGGAGATGCTGGA
GGCCGTGAGCCAATGGAAGAGAAACTCCTGGAAATCCAAGGGAAAATCGAAGCTGTGGAGATGCACTTGACCAGGGAACACATGAAGCGA
GTCTTAGGAGAAGTGTATCTGCACACCTGGATCACAGAAAACACTAGCATCCCCACCCGCGGACTCTGTAACTTTTTAATGTCTGATGAA
GAGTATGATGACAGAACTGCACGGGTGCTGATTGGACATATCTCAAAGAAGATGAACAAACAGACTTTCCCTGAGCACTGTAGTTTGTGT
AAAGAGATCTTGCCATTCACAGATCGCAAACAGGCAGTCTGTTCCAATGGCCACATTTGGCTCCGGCTCTTCGCGGCCAAGTGCAGCGGC
TGCATGGAGAAGATCGCCCCCACCGAGTTCGTGATGCGGGCGCTGGAGTGCGTGTACCACCTGGGCTGCTTCTGCTGCTGCGTGTGTGAA
CGGCAGCTACGCAAGGGCGACGAATTCGTGCTCAAGGAGGGCCAGCTGCTGTGCAAGGGTGACTACGAGAAGGAGAAGGACCTGCTCAGC
TCCGTGAGCCCCGACGAGTCCGACTCCGTGAAGAGCGAGGATGAAGATGGGGACATGAAGCCGGCCAAGGGGCAGGGCAGTCAGAGCAAG
GGCAGCGGGGATGACGGGAAGGACCCGCGGAGGCCCAAGCGACCCCGGACCATCCTCACCACGCAGCAGCGAAGAGCCTTCAAGGCCTCC
TTCGAGGTCTCGTCGAAGCCTTGCCGAAAGGTCCGAGAGACACTGGCAGCTGAGACGGGCCTCAGTGTGCGCGTGGTCCAGGTCTGGTTT
CAGAACCAAAGAGCAAAGATGAAGAAGCTGGCGCGGCGGCACCAGCAGCAGCAGGAGCAGCAGAACTCCCAGCGGCTGGGCCAGGAGGTC
CTGTCCAGCCGCATGGAGGGCATGATGGCTTCCTACACGCCGCTGGCCCCACCACAGCAGCAGATCGTGGCCATGGAACAGAGCCCCTAC
GGCAGCAGCGACCCCTTCCAGCAGGGCCTCACGCCGCCCCAAATGCCAGGGAACGACTCCATCTTCCATGACATCGACAGCGATACCTCC
TTAACCAGCCTCAGCGACTGCTTCCTCGGCTCCTCAGACGTGGGCTCCCTGCAGGCCCGCGTGGGGAACCCCATCGACCGGCTCTACTCC

>In-frame_GTF3C4_ENST00000372146_chr9_135559080_+_LMX1B_ENST00000355497_chr9_129453115_+_3210nt
ATGAACACGGCCGACCAGGCCCGGGTGGGGCCCGCGGACGACGGGCCTGCGCCGTCTGGGGAGGAGGAGGGAGAGGGGGGCGGCGAGGCG
GGCGGGAAGGAGCCAGCAGCGGACGCGGCCCCGGGGCCCAGCGCTGCATTCCGCCTCATGGTGACTCGGCGGGAGCCGGCCGTGAAGCTG
CAGTATGCGGTGAGCGGCCTGGAACCGCTGGCTTGGTCCGAGGACCACCGCGTGTCTGTGTCCACGGCCCGCAGCATCGCTGTGCTGGAG
CTCATCTGCGACGTGCACAACCCGGGCCAGGACCTGGTTATCCACCGCACCTCGGTGCCCGCACCGCTCAACAGCTGTCTCCTCAAAGTT
GGCTCAAAAACAGAAGTTGCTGAGTGCAAGGAGAAATTCGCCGCCTCCAAGGACCCCACGGTCAGTCAGACTTTCATGTTGGATAGGGTG
TTCAACCCTGAGGGGAAGGCTTTACCACCAATGAGAGGATTCAAGTACACCAGCTGGTCTCCCATGGGTTGCGATGCTAATGGCAGGTGC
CTCTTGGCAGCACTGACCATGGACAATCGCCTGACCATCCAGGCAAATCTCAACAGACTGCAGTGGGTCCAGCTGGTTGACCTGACTGAG
ATCTATGGAGAACGTCTTTATGAGACCAGTTACAGGCTCTCTAAAAATGAGGCCCCGGAAGGAAATCTCGGGGATTTTGCTGAGTTTCAG
AGGAGACACAGCATGCAGACCCCAGTCAGAATGGAGTGGTCGGGCATCTGTACCACCCAGCAGGTCAAGCATAACAACGAATGCCGGGAC
GTTGGCAGTGTGCTCCTGGCTGTCCTCTTTGAAAACGGTAATATCGCCGTGTGGCAGTTTCAGCTGCCGTTTGTAGGAAAAGAATCCATC
TCTTCATGCAACACAATTGAGTCAGGAATCACCTCTCCCAGTGTATTGTTTTGGTGGGAATATGAGCACAATAATCGAAAAATGAGTGGC
CTTATTGTGGGGAGTGCTTTTGGACCCATAAAAATTCTTCCTGTCAATCTCAAAGCAGTCAAAGGCTATTTCACTTTAAGGCAGCCTGTT
ATCTTGTGGAAAGAAATGGACCAGTTACCTGTGCACAGTATCAAATGTGTGCCACTTTATCATCCTTACCAGAAGTGTAGTTGCAGCTTA
GTAGTGGCTGCAAGAGGCTCTTATGTATTTTGGTGTCTTCTTCTGATCTCCAAAGCAGGGCTGAATGTTCACAATTCCCATGTCACAGGC
CTTCACTCACTGCCAATTGTCTCCATGACTGCAGACAAACAGAATGGAACAGTCTATACTTGCTCCAGTGACGGAAAGGTGAGGCAGCTG
ATTCCCATTTTCACAGATGTTGCATTGAAGTTTGAACACCAGTTGATTAAACTCTCAGATGTGTTTGGCTCAGTGAGGACTCACGGGATA
GCAGTGAGCCCCTGCGGTGCATACCTGGCCATCATCACCACTGAGGGCATGATCAACGGCCTCCACCCTGTTAACAAAAACTACCAGGTC
CAATTTGTTACTCTCAAAACCTTTGAAGAGGCAGCTGCTCAGCTCCTGGAATCTTCAGTTCAAAACCTTTTTAAGCAGGTAGATTTAATA
GACCTAGTACGCTGGAAGATTTTAAAAGATAAACATATCCCTCAATTTTTACAAGAAGCTTTGGAAAAAAAGATTGAAAGCAGTGGAGTC
ACCTATTTTTGGCGTTTTAAGCTTTTCCTCCTGAGGATTTTATATCAGTCAATGCAGAAAACCCCTTCAGAAGCCTTGTGGAAACCCACC
CATGAGGACTCAAAAATCTTACTAGTGGATTCGCCTGGGATGGGCAATGCTGACGATGAACAGCAGGAAGAAGGCACTTCTTCCAAACAG
GTGGTGAAGCAAGGCCTGCAGGAGAGGAGCAAGGAAGGAGATGTAGAGGAGCCCACTGATGACTCGCTCCCCACGACTGGAGATGCTGGA
GGCCGTGAGCCAATGGAAGAGAAACTCCTGGAAATCCAAGGGAAAATCGAAGCTGTGGAGATGCACTTGACCAGGGAACACATGAAGCGA
GTCTTAGGAGAAGTGTATCTGCACACCTGGATCACAGAAAACACTAGCATCCCCACCCGCGGACTCTGTAACTTTTTAATGTCTGATGAA
GAGTATGATGACAGAACTGCACGGGTGCTGATTGGACATATCTCAAAGAAGATGAACAAACAGACTTTCCCTGAGCACTGTAGTTTGTGT
AAAGAGATCTTGCCATTCACAGATCGCAAACAGGCAGTCTGTTCCAATGGCCACATTTGGCTCCGGCTCTTCGCGGCCAAGTGCAGCGGC
TGCATGGAGAAGATCGCCCCCACCGAGTTCGTGATGCGGGCGCTGGAGTGCGTGTACCACCTGGGCTGCTTCTGCTGCTGCGTGTGTGAA
CGGCAGCTACGCAAGGGCGACGAATTCGTGCTCAAGGAGGGCCAGCTGCTGTGCAAGGGTGACTACGAGAAGGAGAAGGACCTGCTCAGC
TCCGTGAGCCCCGACGAGTCCGACTCCGTGAAGAGCGAGGATGAAGATGGGGACATGAAGCCGGCCAAGGGGCAGGGCAGTCAGAGCAAG
GGCAGCGGGGATGACGGGAAGGACCCGCGGAGGCCCAAGCGACCCCGGACCATCCTCACCACGCAGCAGCGAAGAGCCTTCAAGGCCTCC
TTCGAGGTCTCGTCGAAGCCTTGCCGAAAGGTCCGAGAGACACTGGCAGCTGAGACGGGCCTCAGTGTGCGCGTGGTCCAGGTCTGGTTT
CAGAACCAAAGAGCAAAGATGAAGAAGCTGGCGCGGCGGCACCAGCAGCAGCAGGAGCAGCAGAACTCCCAGCGGCTGGGCCAGGGTGAG
CCGGGGCCGGGGCAGGGCCTGGGCCAGGAGGTCCTGTCCAGCCGCATGGAGGGCATGATGGCTTCCTACACGCCGCTGGCCCCACCACAG
CAGCAGATCGTGGCCATGGAACAGAGCCCCTACGGCAGCAGCGACCCCTTCCAGCAGGGCCTCACGCCGCCCCAAATGCCAGGGAACGAC
TCCATCTTCCATGACATCGACAGCGATACCTCCTTAACCAGCCTCAGCGACTGCTTCCTCGGCTCCTCAGACGTGGGCTCCCTGCAGGCC

>In-frame_GTF3C4_ENST00000372146_chr9_135559080_+_LMX1B_ENST00000561065_chr9_129453115_+_3210nt
ATGAACACGGCCGACCAGGCCCGGGTGGGGCCCGCGGACGACGGGCCTGCGCCGTCTGGGGAGGAGGAGGGAGAGGGGGGCGGCGAGGCG
GGCGGGAAGGAGCCAGCAGCGGACGCGGCCCCGGGGCCCAGCGCTGCATTCCGCCTCATGGTGACTCGGCGGGAGCCGGCCGTGAAGCTG
CAGTATGCGGTGAGCGGCCTGGAACCGCTGGCTTGGTCCGAGGACCACCGCGTGTCTGTGTCCACGGCCCGCAGCATCGCTGTGCTGGAG
CTCATCTGCGACGTGCACAACCCGGGCCAGGACCTGGTTATCCACCGCACCTCGGTGCCCGCACCGCTCAACAGCTGTCTCCTCAAAGTT
GGCTCAAAAACAGAAGTTGCTGAGTGCAAGGAGAAATTCGCCGCCTCCAAGGACCCCACGGTCAGTCAGACTTTCATGTTGGATAGGGTG
TTCAACCCTGAGGGGAAGGCTTTACCACCAATGAGAGGATTCAAGTACACCAGCTGGTCTCCCATGGGTTGCGATGCTAATGGCAGGTGC
CTCTTGGCAGCACTGACCATGGACAATCGCCTGACCATCCAGGCAAATCTCAACAGACTGCAGTGGGTCCAGCTGGTTGACCTGACTGAG
ATCTATGGAGAACGTCTTTATGAGACCAGTTACAGGCTCTCTAAAAATGAGGCCCCGGAAGGAAATCTCGGGGATTTTGCTGAGTTTCAG
AGGAGACACAGCATGCAGACCCCAGTCAGAATGGAGTGGTCGGGCATCTGTACCACCCAGCAGGTCAAGCATAACAACGAATGCCGGGAC
GTTGGCAGTGTGCTCCTGGCTGTCCTCTTTGAAAACGGTAATATCGCCGTGTGGCAGTTTCAGCTGCCGTTTGTAGGAAAAGAATCCATC
TCTTCATGCAACACAATTGAGTCAGGAATCACCTCTCCCAGTGTATTGTTTTGGTGGGAATATGAGCACAATAATCGAAAAATGAGTGGC
CTTATTGTGGGGAGTGCTTTTGGACCCATAAAAATTCTTCCTGTCAATCTCAAAGCAGTCAAAGGCTATTTCACTTTAAGGCAGCCTGTT
ATCTTGTGGAAAGAAATGGACCAGTTACCTGTGCACAGTATCAAATGTGTGCCACTTTATCATCCTTACCAGAAGTGTAGTTGCAGCTTA
GTAGTGGCTGCAAGAGGCTCTTATGTATTTTGGTGTCTTCTTCTGATCTCCAAAGCAGGGCTGAATGTTCACAATTCCCATGTCACAGGC
CTTCACTCACTGCCAATTGTCTCCATGACTGCAGACAAACAGAATGGAACAGTCTATACTTGCTCCAGTGACGGAAAGGTGAGGCAGCTG
ATTCCCATTTTCACAGATGTTGCATTGAAGTTTGAACACCAGTTGATTAAACTCTCAGATGTGTTTGGCTCAGTGAGGACTCACGGGATA
GCAGTGAGCCCCTGCGGTGCATACCTGGCCATCATCACCACTGAGGGCATGATCAACGGCCTCCACCCTGTTAACAAAAACTACCAGGTC
CAATTTGTTACTCTCAAAACCTTTGAAGAGGCAGCTGCTCAGCTCCTGGAATCTTCAGTTCAAAACCTTTTTAAGCAGGTAGATTTAATA
GACCTAGTACGCTGGAAGATTTTAAAAGATAAACATATCCCTCAATTTTTACAAGAAGCTTTGGAAAAAAAGATTGAAAGCAGTGGAGTC
ACCTATTTTTGGCGTTTTAAGCTTTTCCTCCTGAGGATTTTATATCAGTCAATGCAGAAAACCCCTTCAGAAGCCTTGTGGAAACCCACC
CATGAGGACTCAAAAATCTTACTAGTGGATTCGCCTGGGATGGGCAATGCTGACGATGAACAGCAGGAAGAAGGCACTTCTTCCAAACAG
GTGGTGAAGCAAGGCCTGCAGGAGAGGAGCAAGGAAGGAGATGTAGAGGAGCCCACTGATGACTCGCTCCCCACGACTGGAGATGCTGGA
GGCCGTGAGCCAATGGAAGAGAAACTCCTGGAAATCCAAGGGAAAATCGAAGCTGTGGAGATGCACTTGACCAGGGAACACATGAAGCGA
GTCTTAGGAGAAGTGTATCTGCACACCTGGATCACAGAAAACACTAGCATCCCCACCCGCGGACTCTGTAACTTTTTAATGTCTGATGAA
GAGTATGATGACAGAACTGCACGGGTGCTGATTGGACATATCTCAAAGAAGATGAACAAACAGACTTTCCCTGAGCACTGTAGTTTGTGT
AAAGAGATCTTGCCATTCACAGATCGCAAACAGGCAGTCTGTTCCAATGGCCACATTTGGCTCCGGCTCTTCGCGGCCAAGTGCAGCGGC
TGCATGGAGAAGATCGCCCCCACCGAGTTCGTGATGCGGGCGCTGGAGTGCGTGTACCACCTGGGCTGCTTCTGCTGCTGCGTGTGTGAA
CGGCAGCTACGCAAGGGCGACGAATTCGTGCTCAAGGAGGGCCAGCTGCTGTGCAAGGGTGACTACGAGAAGGAGAAGGACCTGCTCAGC
TCCGTGAGCCCCGACGAGTCCGACTCCGTGAAGAGCGAGGATGAAGATGGGGACATGAAGCCGGCCAAGGGGCAGGGCAGTCAGAGCAAG
GGCAGCGGGGATGACGGGAAGGACCCGCGGAGGCCCAAGCGACCCCGGACCATCCTCACCACGCAGCAGCGAAGAGCCTTCAAGGCCTCC
TTCGAGGTCTCGTCGAAGCCTTGCCGAAAGGTCCGAGAGACACTGGCAGCTGAGACGGGCCTCAGTGTGCGCGTGGTCCAGGTCTGGTTT
CAGAACCAAAGAGCAAAGATGAAGAAGCTGGCGCGGCGGCACCAGCAGCAGCAGGAGCAGCAGAACTCCCAGCGGCTGGGCCAGGGTGAG
CCGGGGCCGGGGCAGGGCCTGGGCCAGGAGGTCCTGTCCAGCCGCATGGAGGGCATGATGGCTTCCTACACGCCGCTGGCCCCACCACAG
CAGCAGATCGTGGCCATGGAACAGAGCCCCTACGGCAGCAGCGACCCCTTCCAGCAGGGCCTCACGCCGCCCCAAATGCCAGGGAACGAC
TCCATCTTCCATGACATCGACAGCGATACCTCCTTAACCAGCCTCAGCGACTGCTTCCTCGGCTCCTCAGACGTGGGCTCCCTGCAGGCC


* Fusion transcript sequences (Full-length transcript).
>In-frame_GTF3C4_ENST00000372146_chr9_135559080_+_LMX1B_ENST00000526117_chr9_129453115_+_3741nt
CTTCCGGGTCCGGAACGGCTCCAGCTGTACGGACTCGTCCCGAGGGGAGCCGGGGACGGCGGCACCGGGCGGGTAGGGACAAGACTACCG
CGCGTGCCCCCGCCTGGTGGCAGCCCCTCTCTGCGTCCCTCGCGGCCTGGCAAAATTACATTCGGCCGAGAGTTCACGCTGGGGAAGCTC
TCTGAATGCCTCTGAGAAGCGAGATCCGGCGCCATCTCACCGACGAGCCTCCCCTTTACCGCCCCGTGCGTTTCCTCAGCACTTTAGGAA
CTAAAGCCTGTCTGGGTAGCTCCCTAACAGGCTCTGGAGCTCAATCCCTGGGCAGGGAAAAGGGGGTCCTCGGGGCTCCCCGCTCGCTGT
CCTTTTTCTGGACAGGCAGTTCCTTGGCCACCTGGTAGGGCCGCGTTGCCTGGCAACGGCGGGGTCCTTCTTGGCTCGGCGGCGCTCGGG
GCCTGAGGGGAGAAAACCGCCGCGGAGGGCGCTGGGGGTGGCGGCGGCGGTCCGGGAGGTGGTCGCGCGACTGCGTGGAGCGCCAGGGCG
TCCGACCTCTGCACCTGAGAGAAGATGAACACGGCCGACCAGGCCCGGGTGGGGCCCGCGGACGACGGGCCTGCGCCGTCTGGGGAGGAG
GAGGGAGAGGGGGGCGGCGAGGCGGGCGGGAAGGAGCCAGCAGCGGACGCGGCCCCGGGGCCCAGCGCTGCATTCCGCCTCATGGTGACT
CGGCGGGAGCCGGCCGTGAAGCTGCAGTATGCGGTGAGCGGCCTGGAACCGCTGGCTTGGTCCGAGGACCACCGCGTGTCTGTGTCCACG
GCCCGCAGCATCGCTGTGCTGGAGCTCATCTGCGACGTGCACAACCCGGGCCAGGACCTGGTTATCCACCGCACCTCGGTGCCCGCACCG
CTCAACAGCTGTCTCCTCAAAGTTGGCTCAAAAACAGAAGTTGCTGAGTGCAAGGAGAAATTCGCCGCCTCCAAGGACCCCACGGTCAGT
CAGACTTTCATGTTGGATAGGGTGTTCAACCCTGAGGGGAAGGCTTTACCACCAATGAGAGGATTCAAGTACACCAGCTGGTCTCCCATG
GGTTGCGATGCTAATGGCAGGTGCCTCTTGGCAGCACTGACCATGGACAATCGCCTGACCATCCAGGCAAATCTCAACAGACTGCAGTGG
GTCCAGCTGGTTGACCTGACTGAGATCTATGGAGAACGTCTTTATGAGACCAGTTACAGGCTCTCTAAAAATGAGGCCCCGGAAGGAAAT
CTCGGGGATTTTGCTGAGTTTCAGAGGAGACACAGCATGCAGACCCCAGTCAGAATGGAGTGGTCGGGCATCTGTACCACCCAGCAGGTC
AAGCATAACAACGAATGCCGGGACGTTGGCAGTGTGCTCCTGGCTGTCCTCTTTGAAAACGGTAATATCGCCGTGTGGCAGTTTCAGCTG
CCGTTTGTAGGAAAAGAATCCATCTCTTCATGCAACACAATTGAGTCAGGAATCACCTCTCCCAGTGTATTGTTTTGGTGGGAATATGAG
CACAATAATCGAAAAATGAGTGGCCTTATTGTGGGGAGTGCTTTTGGACCCATAAAAATTCTTCCTGTCAATCTCAAAGCAGTCAAAGGC
TATTTCACTTTAAGGCAGCCTGTTATCTTGTGGAAAGAAATGGACCAGTTACCTGTGCACAGTATCAAATGTGTGCCACTTTATCATCCT
TACCAGAAGTGTAGTTGCAGCTTAGTAGTGGCTGCAAGAGGCTCTTATGTATTTTGGTGTCTTCTTCTGATCTCCAAAGCAGGGCTGAAT
GTTCACAATTCCCATGTCACAGGCCTTCACTCACTGCCAATTGTCTCCATGACTGCAGACAAACAGAATGGAACAGTCTATACTTGCTCC
AGTGACGGAAAGGTGAGGCAGCTGATTCCCATTTTCACAGATGTTGCATTGAAGTTTGAACACCAGTTGATTAAACTCTCAGATGTGTTT
GGCTCAGTGAGGACTCACGGGATAGCAGTGAGCCCCTGCGGTGCATACCTGGCCATCATCACCACTGAGGGCATGATCAACGGCCTCCAC
CCTGTTAACAAAAACTACCAGGTCCAATTTGTTACTCTCAAAACCTTTGAAGAGGCAGCTGCTCAGCTCCTGGAATCTTCAGTTCAAAAC
CTTTTTAAGCAGGTAGATTTAATAGACCTAGTACGCTGGAAGATTTTAAAAGATAAACATATCCCTCAATTTTTACAAGAAGCTTTGGAA
AAAAAGATTGAAAGCAGTGGAGTCACCTATTTTTGGCGTTTTAAGCTTTTCCTCCTGAGGATTTTATATCAGTCAATGCAGAAAACCCCT
TCAGAAGCCTTGTGGAAACCCACCCATGAGGACTCAAAAATCTTACTAGTGGATTCGCCTGGGATGGGCAATGCTGACGATGAACAGCAG
GAAGAAGGCACTTCTTCCAAACAGGTGGTGAAGCAAGGCCTGCAGGAGAGGAGCAAGGAAGGAGATGTAGAGGAGCCCACTGATGACTCG
CTCCCCACGACTGGAGATGCTGGAGGCCGTGAGCCAATGGAAGAGAAACTCCTGGAAATCCAAGGGAAAATCGAAGCTGTGGAGATGCAC
TTGACCAGGGAACACATGAAGCGAGTCTTAGGAGAAGTGTATCTGCACACCTGGATCACAGAAAACACTAGCATCCCCACCCGCGGACTC
TGTAACTTTTTAATGTCTGATGAAGAGTATGATGACAGAACTGCACGGGTGCTGATTGGACATATCTCAAAGAAGATGAACAAACAGACT
TTCCCTGAGCACTGTAGTTTGTGTAAAGAGATCTTGCCATTCACAGATCGCAAACAGGCAGTCTGTTCCAATGGCCACATTTGGCTCCGG
CTCTTCGCGGCCAAGTGCAGCGGCTGCATGGAGAAGATCGCCCCCACCGAGTTCGTGATGCGGGCGCTGGAGTGCGTGTACCACCTGGGC
TGCTTCTGCTGCTGCGTGTGTGAACGGCAGCTACGCAAGGGCGACGAATTCGTGCTCAAGGAGGGCCAGCTGCTGTGCAAGGGTGACTAC
GAGAAGGAGAAGGACCTGCTCAGCTCCGTGAGCCCCGACGAGTCCGACTCCGTGAAGAGCGAGGATGAAGATGGGGACATGAAGCCGGCC
AAGGGGCAGGGCAGTCAGAGCAAGGGCAGCGGGGATGACGGGAAGGACCCGCGGAGGCCCAAGCGACCCCGGACCATCCTCACCACGCAG
CAGCGAAGAGCCTTCAAGGCCTCCTTCGAGGTCTCGTCGAAGCCTTGCCGAAAGGTCCGAGAGACACTGGCAGCTGAGACGGGCCTCAGT
GTGCGCGTGGTCCAGGTCTGGTTTCAGAACCAAAGAGCAAAGATGAAGAAGCTGGCGCGGCGGCACCAGCAGCAGCAGGAGCAGCAGAAC
TCCCAGCGGCTGGGCCAGGAGGTCCTGTCCAGCCGCATGGAGGGCATGATGGCTTCCTACACGCCGCTGGCCCCACCACAGCAGCAGATC
GTGGCCATGGAACAGAGCCCCTACGGCAGCAGCGACCCCTTCCAGCAGGGCCTCACGCCGCCCCAAATGCCAGGGAACGACTCCATCTTC
CATGACATCGACAGCGATACCTCCTTAACCAGCCTCAGCGACTGCTTCCTCGGCTCCTCAGACGTGGGCTCCCTGCAGGCCCGCGTGGGG

>In-frame_GTF3C4_ENST00000372146_chr9_135559080_+_LMX1B_ENST00000373474_chr9_129453115_+_3860nt
CTTCCGGGTCCGGAACGGCTCCAGCTGTACGGACTCGTCCCGAGGGGAGCCGGGGACGGCGGCACCGGGCGGGTAGGGACAAGACTACCG
CGCGTGCCCCCGCCTGGTGGCAGCCCCTCTCTGCGTCCCTCGCGGCCTGGCAAAATTACATTCGGCCGAGAGTTCACGCTGGGGAAGCTC
TCTGAATGCCTCTGAGAAGCGAGATCCGGCGCCATCTCACCGACGAGCCTCCCCTTTACCGCCCCGTGCGTTTCCTCAGCACTTTAGGAA
CTAAAGCCTGTCTGGGTAGCTCCCTAACAGGCTCTGGAGCTCAATCCCTGGGCAGGGAAAAGGGGGTCCTCGGGGCTCCCCGCTCGCTGT
CCTTTTTCTGGACAGGCAGTTCCTTGGCCACCTGGTAGGGCCGCGTTGCCTGGCAACGGCGGGGTCCTTCTTGGCTCGGCGGCGCTCGGG
GCCTGAGGGGAGAAAACCGCCGCGGAGGGCGCTGGGGGTGGCGGCGGCGGTCCGGGAGGTGGTCGCGCGACTGCGTGGAGCGCCAGGGCG
TCCGACCTCTGCACCTGAGAGAAGATGAACACGGCCGACCAGGCCCGGGTGGGGCCCGCGGACGACGGGCCTGCGCCGTCTGGGGAGGAG
GAGGGAGAGGGGGGCGGCGAGGCGGGCGGGAAGGAGCCAGCAGCGGACGCGGCCCCGGGGCCCAGCGCTGCATTCCGCCTCATGGTGACT
CGGCGGGAGCCGGCCGTGAAGCTGCAGTATGCGGTGAGCGGCCTGGAACCGCTGGCTTGGTCCGAGGACCACCGCGTGTCTGTGTCCACG
GCCCGCAGCATCGCTGTGCTGGAGCTCATCTGCGACGTGCACAACCCGGGCCAGGACCTGGTTATCCACCGCACCTCGGTGCCCGCACCG
CTCAACAGCTGTCTCCTCAAAGTTGGCTCAAAAACAGAAGTTGCTGAGTGCAAGGAGAAATTCGCCGCCTCCAAGGACCCCACGGTCAGT
CAGACTTTCATGTTGGATAGGGTGTTCAACCCTGAGGGGAAGGCTTTACCACCAATGAGAGGATTCAAGTACACCAGCTGGTCTCCCATG
GGTTGCGATGCTAATGGCAGGTGCCTCTTGGCAGCACTGACCATGGACAATCGCCTGACCATCCAGGCAAATCTCAACAGACTGCAGTGG
GTCCAGCTGGTTGACCTGACTGAGATCTATGGAGAACGTCTTTATGAGACCAGTTACAGGCTCTCTAAAAATGAGGCCCCGGAAGGAAAT
CTCGGGGATTTTGCTGAGTTTCAGAGGAGACACAGCATGCAGACCCCAGTCAGAATGGAGTGGTCGGGCATCTGTACCACCCAGCAGGTC
AAGCATAACAACGAATGCCGGGACGTTGGCAGTGTGCTCCTGGCTGTCCTCTTTGAAAACGGTAATATCGCCGTGTGGCAGTTTCAGCTG
CCGTTTGTAGGAAAAGAATCCATCTCTTCATGCAACACAATTGAGTCAGGAATCACCTCTCCCAGTGTATTGTTTTGGTGGGAATATGAG
CACAATAATCGAAAAATGAGTGGCCTTATTGTGGGGAGTGCTTTTGGACCCATAAAAATTCTTCCTGTCAATCTCAAAGCAGTCAAAGGC
TATTTCACTTTAAGGCAGCCTGTTATCTTGTGGAAAGAAATGGACCAGTTACCTGTGCACAGTATCAAATGTGTGCCACTTTATCATCCT
TACCAGAAGTGTAGTTGCAGCTTAGTAGTGGCTGCAAGAGGCTCTTATGTATTTTGGTGTCTTCTTCTGATCTCCAAAGCAGGGCTGAAT
GTTCACAATTCCCATGTCACAGGCCTTCACTCACTGCCAATTGTCTCCATGACTGCAGACAAACAGAATGGAACAGTCTATACTTGCTCC
AGTGACGGAAAGGTGAGGCAGCTGATTCCCATTTTCACAGATGTTGCATTGAAGTTTGAACACCAGTTGATTAAACTCTCAGATGTGTTT
GGCTCAGTGAGGACTCACGGGATAGCAGTGAGCCCCTGCGGTGCATACCTGGCCATCATCACCACTGAGGGCATGATCAACGGCCTCCAC
CCTGTTAACAAAAACTACCAGGTCCAATTTGTTACTCTCAAAACCTTTGAAGAGGCAGCTGCTCAGCTCCTGGAATCTTCAGTTCAAAAC
CTTTTTAAGCAGGTAGATTTAATAGACCTAGTACGCTGGAAGATTTTAAAAGATAAACATATCCCTCAATTTTTACAAGAAGCTTTGGAA
AAAAAGATTGAAAGCAGTGGAGTCACCTATTTTTGGCGTTTTAAGCTTTTCCTCCTGAGGATTTTATATCAGTCAATGCAGAAAACCCCT
TCAGAAGCCTTGTGGAAACCCACCCATGAGGACTCAAAAATCTTACTAGTGGATTCGCCTGGGATGGGCAATGCTGACGATGAACAGCAG
GAAGAAGGCACTTCTTCCAAACAGGTGGTGAAGCAAGGCCTGCAGGAGAGGAGCAAGGAAGGAGATGTAGAGGAGCCCACTGATGACTCG
CTCCCCACGACTGGAGATGCTGGAGGCCGTGAGCCAATGGAAGAGAAACTCCTGGAAATCCAAGGGAAAATCGAAGCTGTGGAGATGCAC
TTGACCAGGGAACACATGAAGCGAGTCTTAGGAGAAGTGTATCTGCACACCTGGATCACAGAAAACACTAGCATCCCCACCCGCGGACTC
TGTAACTTTTTAATGTCTGATGAAGAGTATGATGACAGAACTGCACGGGTGCTGATTGGACATATCTCAAAGAAGATGAACAAACAGACT
TTCCCTGAGCACTGTAGTTTGTGTAAAGAGATCTTGCCATTCACAGATCGCAAACAGGCAGTCTGTTCCAATGGCCACATTTGGCTCCGG
CTCTTCGCGGCCAAGTGCAGCGGCTGCATGGAGAAGATCGCCCCCACCGAGTTCGTGATGCGGGCGCTGGAGTGCGTGTACCACCTGGGC
TGCTTCTGCTGCTGCGTGTGTGAACGGCAGCTACGCAAGGGCGACGAATTCGTGCTCAAGGAGGGCCAGCTGCTGTGCAAGGGTGACTAC
GAGAAGGAGAAGGACCTGCTCAGCTCCGTGAGCCCCGACGAGTCCGACTCCGTGAAGAGCGAGGATGAAGATGGGGACATGAAGCCGGCC
AAGGGGCAGGGCAGTCAGAGCAAGGGCAGCGGGGATGACGGGAAGGACCCGCGGAGGCCCAAGCGACCCCGGACCATCCTCACCACGCAG
CAGCGAAGAGCCTTCAAGGCCTCCTTCGAGGTCTCGTCGAAGCCTTGCCGAAAGGTCCGAGAGACACTGGCAGCTGAGACGGGCCTCAGT
GTGCGCGTGGTCCAGGTCTGGTTTCAGAACCAAAGAGCAAAGATGAAGAAGCTGGCGCGGCGGCACCAGCAGCAGCAGGAGCAGCAGAAC
TCCCAGCGGCTGGGCCAGGAGGTCCTGTCCAGCCGCATGGAGGGCATGATGGCTTCCTACACGCCGCTGGCCCCACCACAGCAGCAGATC
GTGGCCATGGAACAGAGCCCCTACGGCAGCAGCGACCCCTTCCAGCAGGGCCTCACGCCGCCCCAAATGCCAGGTGACCACATGAACCCC
TATGGGAACGACTCCATCTTCCATGACATCGACAGCGATACCTCCTTAACCAGCCTCAGCGACTGCTTCCTCGGCTCCTCAGACGTGGGC
TCCCTGCAGGCCCGCGTGGGGAACCCCATCGACCGGCTCTACTCCATGCAGAGTTCCTACTTCGCCTCCTGAGAGCCAGCCAGGCGCACG

>In-frame_GTF3C4_ENST00000372146_chr9_135559080_+_LMX1B_ENST00000425646_chr9_129453115_+_8322nt
CTTCCGGGTCCGGAACGGCTCCAGCTGTACGGACTCGTCCCGAGGGGAGCCGGGGACGGCGGCACCGGGCGGGTAGGGACAAGACTACCG
CGCGTGCCCCCGCCTGGTGGCAGCCCCTCTCTGCGTCCCTCGCGGCCTGGCAAAATTACATTCGGCCGAGAGTTCACGCTGGGGAAGCTC
TCTGAATGCCTCTGAGAAGCGAGATCCGGCGCCATCTCACCGACGAGCCTCCCCTTTACCGCCCCGTGCGTTTCCTCAGCACTTTAGGAA
CTAAAGCCTGTCTGGGTAGCTCCCTAACAGGCTCTGGAGCTCAATCCCTGGGCAGGGAAAAGGGGGTCCTCGGGGCTCCCCGCTCGCTGT
CCTTTTTCTGGACAGGCAGTTCCTTGGCCACCTGGTAGGGCCGCGTTGCCTGGCAACGGCGGGGTCCTTCTTGGCTCGGCGGCGCTCGGG
GCCTGAGGGGAGAAAACCGCCGCGGAGGGCGCTGGGGGTGGCGGCGGCGGTCCGGGAGGTGGTCGCGCGACTGCGTGGAGCGCCAGGGCG
TCCGACCTCTGCACCTGAGAGAAGATGAACACGGCCGACCAGGCCCGGGTGGGGCCCGCGGACGACGGGCCTGCGCCGTCTGGGGAGGAG
GAGGGAGAGGGGGGCGGCGAGGCGGGCGGGAAGGAGCCAGCAGCGGACGCGGCCCCGGGGCCCAGCGCTGCATTCCGCCTCATGGTGACT
CGGCGGGAGCCGGCCGTGAAGCTGCAGTATGCGGTGAGCGGCCTGGAACCGCTGGCTTGGTCCGAGGACCACCGCGTGTCTGTGTCCACG
GCCCGCAGCATCGCTGTGCTGGAGCTCATCTGCGACGTGCACAACCCGGGCCAGGACCTGGTTATCCACCGCACCTCGGTGCCCGCACCG
CTCAACAGCTGTCTCCTCAAAGTTGGCTCAAAAACAGAAGTTGCTGAGTGCAAGGAGAAATTCGCCGCCTCCAAGGACCCCACGGTCAGT
CAGACTTTCATGTTGGATAGGGTGTTCAACCCTGAGGGGAAGGCTTTACCACCAATGAGAGGATTCAAGTACACCAGCTGGTCTCCCATG
GGTTGCGATGCTAATGGCAGGTGCCTCTTGGCAGCACTGACCATGGACAATCGCCTGACCATCCAGGCAAATCTCAACAGACTGCAGTGG
GTCCAGCTGGTTGACCTGACTGAGATCTATGGAGAACGTCTTTATGAGACCAGTTACAGGCTCTCTAAAAATGAGGCCCCGGAAGGAAAT
CTCGGGGATTTTGCTGAGTTTCAGAGGAGACACAGCATGCAGACCCCAGTCAGAATGGAGTGGTCGGGCATCTGTACCACCCAGCAGGTC
AAGCATAACAACGAATGCCGGGACGTTGGCAGTGTGCTCCTGGCTGTCCTCTTTGAAAACGGTAATATCGCCGTGTGGCAGTTTCAGCTG
CCGTTTGTAGGAAAAGAATCCATCTCTTCATGCAACACAATTGAGTCAGGAATCACCTCTCCCAGTGTATTGTTTTGGTGGGAATATGAG
CACAATAATCGAAAAATGAGTGGCCTTATTGTGGGGAGTGCTTTTGGACCCATAAAAATTCTTCCTGTCAATCTCAAAGCAGTCAAAGGC
TATTTCACTTTAAGGCAGCCTGTTATCTTGTGGAAAGAAATGGACCAGTTACCTGTGCACAGTATCAAATGTGTGCCACTTTATCATCCT
TACCAGAAGTGTAGTTGCAGCTTAGTAGTGGCTGCAAGAGGCTCTTATGTATTTTGGTGTCTTCTTCTGATCTCCAAAGCAGGGCTGAAT
GTTCACAATTCCCATGTCACAGGCCTTCACTCACTGCCAATTGTCTCCATGACTGCAGACAAACAGAATGGAACAGTCTATACTTGCTCC
AGTGACGGAAAGGTGAGGCAGCTGATTCCCATTTTCACAGATGTTGCATTGAAGTTTGAACACCAGTTGATTAAACTCTCAGATGTGTTT
GGCTCAGTGAGGACTCACGGGATAGCAGTGAGCCCCTGCGGTGCATACCTGGCCATCATCACCACTGAGGGCATGATCAACGGCCTCCAC
CCTGTTAACAAAAACTACCAGGTCCAATTTGTTACTCTCAAAACCTTTGAAGAGGCAGCTGCTCAGCTCCTGGAATCTTCAGTTCAAAAC
CTTTTTAAGCAGGTAGATTTAATAGACCTAGTACGCTGGAAGATTTTAAAAGATAAACATATCCCTCAATTTTTACAAGAAGCTTTGGAA
AAAAAGATTGAAAGCAGTGGAGTCACCTATTTTTGGCGTTTTAAGCTTTTCCTCCTGAGGATTTTATATCAGTCAATGCAGAAAACCCCT
TCAGAAGCCTTGTGGAAACCCACCCATGAGGACTCAAAAATCTTACTAGTGGATTCGCCTGGGATGGGCAATGCTGACGATGAACAGCAG
GAAGAAGGCACTTCTTCCAAACAGGTGGTGAAGCAAGGCCTGCAGGAGAGGAGCAAGGAAGGAGATGTAGAGGAGCCCACTGATGACTCG
CTCCCCACGACTGGAGATGCTGGAGGCCGTGAGCCAATGGAAGAGAAACTCCTGGAAATCCAAGGGAAAATCGAAGCTGTGGAGATGCAC
TTGACCAGGGAACACATGAAGCGAGTCTTAGGAGAAGTGTATCTGCACACCTGGATCACAGAAAACACTAGCATCCCCACCCGCGGACTC
TGTAACTTTTTAATGTCTGATGAAGAGTATGATGACAGAACTGCACGGGTGCTGATTGGACATATCTCAAAGAAGATGAACAAACAGACT
TTCCCTGAGCACTGTAGTTTGTGTAAAGAGATCTTGCCATTCACAGATCGCAAACAGGCAGTCTGTTCCAATGGCCACATTTGGCTCCGG
CTCTTCGCGGCCAAGTGCAGCGGCTGCATGGAGAAGATCGCCCCCACCGAGTTCGTGATGCGGGCGCTGGAGTGCGTGTACCACCTGGGC
TGCTTCTGCTGCTGCGTGTGTGAACGGCAGCTACGCAAGGGCGACGAATTCGTGCTCAAGGAGGGCCAGCTGCTGTGCAAGGGTGACTAC
GAGAAGGAGAAGGACCTGCTCAGCTCCGTGAGCCCCGACGAGTCCGACTCCGTGAAGAGCGAGGATGAAGATGGGGACATGAAGCCGGCC
AAGGGGCAGGGCAGTCAGAGCAAGGGCAGCGGGGATGACGGGAAGGACCCGCGGAGGCCCAAGCGACCCCGGACCATCCTCACCACGCAG
CAGCGAAGAGCCTTCAAGGCCTCCTTCGAGGTCTCGTCGAAGCCTTGCCGAAAGGTCCGAGAGACACTGGCAGCTGAGACGGGCCTCAGT
GTGCGCGTGGTCCAGGTCTGGTTTCAGAACCAAAGAGCAAAGATGAAGAAGCTGGCGCGGCGGCACCAGCAGCAGCAGGAGCAGCAGAAC
TCCCAGCGGCTGGGCCAGGAGGTCCTGTCCAGCCGCATGGAGGGCATGATGGCTTCCTACACGCCGCTGGCCCCACCACAGCAGCAGATC
GTGGCCATGGAACAGAGCCCCTACGGCAGCAGCGACCCCTTCCAGCAGGGCCTCACGCCGCCCCAAATGCCAGGGAACGACTCCATCTTC
CATGACATCGACAGCGATACCTCCTTAACCAGCCTCAGCGACTGCTTCCTCGGCTCCTCAGACGTGGGCTCCCTGCAGGCCCGCGTGGGG
AACCCCATCGACCGGCTCTACTCCATGCAGAGTTCCTACTTCGCCTCCTGAGAGCCAGCCAGGCGCACGGACGCTTGGGCAGGGGCCTGG
GGGGGACTGCCAGCCTCTGCGGCCAGCCTGGCCACCCCCGCCCTGCTCTCCGCACAGACTACAGACAGCCATACGGTGCCCTCCCCTCGG
CCAGCTGGGCCTGACCACTGTGCCCGTTGGGTACAGCCAGACCGGTAGATGGGCACAGCCTGGGCAGGGGCTGTGTCCTGCCCACAGAGA
CCTTGTCATCCCCAGGGACCCAGAGCTCTCGGACGGCCACTCGCCTCCCAGCCCCACCTCGGCCTCCATCGCCTCCTCCCCATCTCTTTT
TTGGGAAGCTTAAATTCTCTCTATTTTTTTAAATGTCCTCTCTGTGTCCATGGCCCTCCATGCAAGCCCCAGGACAATGGTGTCATGAGG
CGGTGACCTGAGAAGCGTGTGTACCTGTGCCCCAGCAAGGGCAGGGGTGGCCTCTGGGGGCAGGCCCACTGCCTGGAACCGCACACCCCT
CAGCCTGAGTCTGGAGCAGCAGTGGAGAGGGGCCTGAGGGGAGGCACTGTCAGGAGGCGGGCTCGGAGCCTGAGCCTGGGCAGGCGCAAA
GGGACAGAGAGGCACGTGCAGACACATGCACACTTGCAGACAAACCCACGCAAACACACACACAGCTGTATGGGGACACCAGAAGGGACA
GGGATGCTCAGCGGGTCTGTCCTGCCTTGTCAGAAAGAGAAAAGGAGGCCAGGCAGGGGACCCCCCAGTTCTTAAGAGCGATTGGAAAGG
GAGGAAGGGGAGAGGAAGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCCTGGGCCCAAATGGGGGCAGCCTGGGCAGGGAGG
GCAGCCCCAGGCCCCACCAACTCTAGAGGCAGATGGAGCCCCCAGAACCAGGTAGCATCAGACCAGACAACAGAGCCTCCAGGGGTCAGG
GACTTCAGAAGCACCTGCTGGGCACCCCATCTGCAATGTGGTCCTCTCCCCAGCCACCTCTGCCTCCCCTCACATACCTCCAGTGACAAG
GAGCTCACTAGGTCAGCGAGCCCACAGCAGCTGTGCTGTCCTGCATCCCAGAGCCAGGCTTCCCCAGCTCTCCCTCTTAACACTGTCCCC
CAGCAGGCCTCCGGCTGTCCCTCTAAAGGTGTGGGGCAGGTATCACTTCACCTTCCCACTGATGTCAGCCGGCCAGAAGTGAGCAGGCAC
ATCACCTCTCCTGCTGTGGCACCCTTCCTCTGTTAATTTGGCCCAAAAGACAATGATTTGGCCACATGACCTTAGAGATTCACCCTGCCC
TGCTGTAGCTAAATCCCTGGGCCCCACACGCAAGTGACAGCTAAGCCACATCTGTTTTCTGTGTATATGCAGGATGGGGGCACCTACTGT
TTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTGAGACGGAGTTTCGCTCTTGTTGCCCAGGCTGGAGTGC
AATGGCGCGATCTCGGCTCACCACAACCTCCGCCTCCCAGGTTCAAGTGATTCTGATGCCTCAGCCTCCCTAGTAGCTGAGATTACAGGC
ATGCGCCACCACACCCAGCTAATTTTGTATTTTTAGTAGCAACGGGGTTTCTCCATGTTGGTCAGGCTGGTCTCCAACCCCCGACCTCAG
GTGATCCGCCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCACCCAGTCTGCACTTACTGTTTAGACTGAATGAG
GGACCGTGACCTCTTTCCTTTTCCATTCCTTCTTACTCGATTCATTCCAGCCTGTGGAATTTCTCTGCACCCTGATTCAGTGACCACTGC
TCTCCTCTCTCCCAGCACATCTGCCCAGTGAGGAGTTGGCCCTGGGTCTCACCTGAGGTGTGTGGACCGGGCTGGCCTCTCCCTGTTTGA
CATTGGCCCATTAATGCATCCTCTTTGGGGGACACATTCCAATTGCATTTCCTGCCCCCTTCTCCCAGGGCAATTGCAGAAGATTGTGTC
AGGCGCCCTGCTGGAAGTCAGGTGCACTAGATCCATCCCCAGCCCCAGTCTGCTCAACTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTG
CTGGGGCCTGACTGGTGAGCCCACCCTGTCCCCTGGTGATCACTGTGTCCCCTTGTTCAGGTGCTCACAACCCTACCTTTAACTCTGAGG
TCAAGCCCTAGGCCACCACCCTAAAGTCTGCCTGGTCCAACCTTTGAGCAAGTAAGGATAATGAATGTCCCTTTTCCACCTTTGGGGCCC
TCTGCCTGGATCTCTGGAATCCTCTAAGTTCAACCTGTTCTGTGGTTTTGCTCCCGTTTGCTGGGAAATTCAGTCCCCCCAGAATGTCCT
GGGCCAACCTCCTTGCCTGACATGTGGCCTCGTGTCACCCATTGGGCCCCAGCAGCCAGCTAGCCCTTCTGCAGCTCTTCTTACAAACAG
AGCCTCTCCAAGGACCTCAGTTGATGTTCTGGTCCTTCTGCCGCCTCAGCCCACCAGGGTCCGTGCCACCATGGGTCTCTTGAGCAGCAG
CTGCACTGGCTTCTGGAGAGACACCCCTCTTTCTCCTTTTGCACATGCACCATCTGAATCGTGCCAGGGACATCCTGGGCAGATTCAGGG
GCAGATGCCCTATCCCCCAGGAGACCTGGCCCTTCTCTCTCAGACCCAATAAGTTGGAAGGGACGTCAGAAGCGGTCATCTCATCTGCCC
CTTATTTTATAGTTGGAAACCCTGAGGCAAGAGAGGGAAAGAGGCCTGTCCAAGGTCCGGGTTAGTGACAGAGCTGAGCTGAGAACAGGG
ACGTTGTGCCCCACTGTCCCCTGTGGTTTGTGAATGACCTCCAGGTCAGGGGGTCACAACTTGTTCTTAGTAAACTTGCCAGCTGTTGGG
GTCACATATTCCCATTCTGGGGCCTCACAAACCCCCGAATCCAGCCGGGACCCCATGCCAGGAGCTGGTCTAGGGACAGCATGCTTGTGA
CCCACAGACTGTTAAAGCCAGAAGGGACCTCAGAGAGTCCCTTATGCTGGAGGCGCCCTGTCAGCCGTGGCTAGGGGCCCCTTGCTCTAT
GCTGTGCCTTGCTGCCCACAGGCTCCCAGACACCAGTGCCCACTCTGCCCAGCCCCGGACTGGGTGTGGCTCGCAGATGAACAAGATGCA
GGGCCTGCCTTGAGGGGTGTCTCCTAGAAGGAAAGCCAGACTCTCCGGCCCAGCCAGAGAGTCCAGACATGGCAGGGACCCGTTTCTCAG
ATGAGGAGCCTGAGGCTCAGAGAAGGGAGGCGATGTGTTCAGGGCCACCCAGCAGAAGCCTGTGGGGCTGGGCAACCTTCTCCCACTTTA
TGGGAGGAGCTGCAGCCTTGGCTGGGAGCTGGGCGGGGAGTAGCCAGGACCACCCCTTGCCCGTGCCGTGACATGGAACCTTCATCACTA
AGGGGGCTGGAGTGGGAAGAGGGAGATAACTGTGTGGTCTCCAGAGCAAAAGAGAATGAGAGGTGGGCAGGGGGAGTCTTGGCAAAAGAC
CAAGTTCCACTTCCCTGCTGGGGAAGTCAAGGCTCAGAAAGAGGAAATAATTGCCCCAGGTAACACAGGGCAGAGGAGGGACAAAAAGCT
GGGCATGGCCCCAGCCAGAGCCTCATCTGCCTACTCCGTGAAGCCTCCCAGGTACTCTGCTATCCTGGGAAACGCACAGGGAGGCCACAC
AGAGACACTGCTCACAAGAGTCAGACCAAGGTGCCAGCACAGCCTGGAAAGAGCTCAGAAAGGGGGTTGGTGCACGTGGCTGGGCATCTT
AGGAGGCTTCCTGAGGGTGGGTAAAGGTGGGAAGGCCCTGGCGCTGCATCAGATGAGCAGGGCCTGGCAGGGACAAGCCTCTTCTCCTTT
GGGAAGCCCTGCAGCCTCCTAGCAAGAGGCTGATTCCCCACTCTGCCCCCATCTGAATGTCCTTTTCATGTTGCACGCAGGGAACCTCAG
GAAGGAGGATTGCCTGATGCCTGCCTGGCTCCATCCTTGAGCTCTGGGCACCACCTAGGGTGAGGGAGAGCCTGCAGCTCTGGGGCTAAG
TCTGCCCTGGGGGGAAAGGGCTCCACGCTCACACGCACGCGCTCGCACACACACACTCACACCTGGACGCACACGGAGGCTTGCGGACCC
ATACTCACAGGCACATGTGGCCTGGGGACTGGGGGAGCAGGAAAGACCCCTCCAACATTTGGCCCTTGGAAGGCACCATTGCCAATGAGC
CTCTTTGCTGGTTCCCCCGACCCCACCTGGGGGTCCCATGGGAGCCCAGCCCAGCCAGGTGTGGGGATGGGCCACCGGCCATTCCTGTTT
TCCTTGTACAGACAGATTCTCACTACCCACCCGCCATCCCCAGACACATTTTATTTAATAACTTGTCATTGTTAAATTATTTATTAGCGT
TTACCACACCACCACCCCCACCCTGCCCTCCACTCTCACCTTCCACCTCTTCCCACAACAGCAGAAAATGGAAACAACAACAAAAAAAGA

>In-frame_GTF3C4_ENST00000372146_chr9_135559080_+_LMX1B_ENST00000355497_chr9_129453115_+_8355nt
CTTCCGGGTCCGGAACGGCTCCAGCTGTACGGACTCGTCCCGAGGGGAGCCGGGGACGGCGGCACCGGGCGGGTAGGGACAAGACTACCG
CGCGTGCCCCCGCCTGGTGGCAGCCCCTCTCTGCGTCCCTCGCGGCCTGGCAAAATTACATTCGGCCGAGAGTTCACGCTGGGGAAGCTC
TCTGAATGCCTCTGAGAAGCGAGATCCGGCGCCATCTCACCGACGAGCCTCCCCTTTACCGCCCCGTGCGTTTCCTCAGCACTTTAGGAA
CTAAAGCCTGTCTGGGTAGCTCCCTAACAGGCTCTGGAGCTCAATCCCTGGGCAGGGAAAAGGGGGTCCTCGGGGCTCCCCGCTCGCTGT
CCTTTTTCTGGACAGGCAGTTCCTTGGCCACCTGGTAGGGCCGCGTTGCCTGGCAACGGCGGGGTCCTTCTTGGCTCGGCGGCGCTCGGG
GCCTGAGGGGAGAAAACCGCCGCGGAGGGCGCTGGGGGTGGCGGCGGCGGTCCGGGAGGTGGTCGCGCGACTGCGTGGAGCGCCAGGGCG
TCCGACCTCTGCACCTGAGAGAAGATGAACACGGCCGACCAGGCCCGGGTGGGGCCCGCGGACGACGGGCCTGCGCCGTCTGGGGAGGAG
GAGGGAGAGGGGGGCGGCGAGGCGGGCGGGAAGGAGCCAGCAGCGGACGCGGCCCCGGGGCCCAGCGCTGCATTCCGCCTCATGGTGACT
CGGCGGGAGCCGGCCGTGAAGCTGCAGTATGCGGTGAGCGGCCTGGAACCGCTGGCTTGGTCCGAGGACCACCGCGTGTCTGTGTCCACG
GCCCGCAGCATCGCTGTGCTGGAGCTCATCTGCGACGTGCACAACCCGGGCCAGGACCTGGTTATCCACCGCACCTCGGTGCCCGCACCG
CTCAACAGCTGTCTCCTCAAAGTTGGCTCAAAAACAGAAGTTGCTGAGTGCAAGGAGAAATTCGCCGCCTCCAAGGACCCCACGGTCAGT
CAGACTTTCATGTTGGATAGGGTGTTCAACCCTGAGGGGAAGGCTTTACCACCAATGAGAGGATTCAAGTACACCAGCTGGTCTCCCATG
GGTTGCGATGCTAATGGCAGGTGCCTCTTGGCAGCACTGACCATGGACAATCGCCTGACCATCCAGGCAAATCTCAACAGACTGCAGTGG
GTCCAGCTGGTTGACCTGACTGAGATCTATGGAGAACGTCTTTATGAGACCAGTTACAGGCTCTCTAAAAATGAGGCCCCGGAAGGAAAT
CTCGGGGATTTTGCTGAGTTTCAGAGGAGACACAGCATGCAGACCCCAGTCAGAATGGAGTGGTCGGGCATCTGTACCACCCAGCAGGTC
AAGCATAACAACGAATGCCGGGACGTTGGCAGTGTGCTCCTGGCTGTCCTCTTTGAAAACGGTAATATCGCCGTGTGGCAGTTTCAGCTG
CCGTTTGTAGGAAAAGAATCCATCTCTTCATGCAACACAATTGAGTCAGGAATCACCTCTCCCAGTGTATTGTTTTGGTGGGAATATGAG
CACAATAATCGAAAAATGAGTGGCCTTATTGTGGGGAGTGCTTTTGGACCCATAAAAATTCTTCCTGTCAATCTCAAAGCAGTCAAAGGC
TATTTCACTTTAAGGCAGCCTGTTATCTTGTGGAAAGAAATGGACCAGTTACCTGTGCACAGTATCAAATGTGTGCCACTTTATCATCCT
TACCAGAAGTGTAGTTGCAGCTTAGTAGTGGCTGCAAGAGGCTCTTATGTATTTTGGTGTCTTCTTCTGATCTCCAAAGCAGGGCTGAAT
GTTCACAATTCCCATGTCACAGGCCTTCACTCACTGCCAATTGTCTCCATGACTGCAGACAAACAGAATGGAACAGTCTATACTTGCTCC
AGTGACGGAAAGGTGAGGCAGCTGATTCCCATTTTCACAGATGTTGCATTGAAGTTTGAACACCAGTTGATTAAACTCTCAGATGTGTTT
GGCTCAGTGAGGACTCACGGGATAGCAGTGAGCCCCTGCGGTGCATACCTGGCCATCATCACCACTGAGGGCATGATCAACGGCCTCCAC
CCTGTTAACAAAAACTACCAGGTCCAATTTGTTACTCTCAAAACCTTTGAAGAGGCAGCTGCTCAGCTCCTGGAATCTTCAGTTCAAAAC
CTTTTTAAGCAGGTAGATTTAATAGACCTAGTACGCTGGAAGATTTTAAAAGATAAACATATCCCTCAATTTTTACAAGAAGCTTTGGAA
AAAAAGATTGAAAGCAGTGGAGTCACCTATTTTTGGCGTTTTAAGCTTTTCCTCCTGAGGATTTTATATCAGTCAATGCAGAAAACCCCT
TCAGAAGCCTTGTGGAAACCCACCCATGAGGACTCAAAAATCTTACTAGTGGATTCGCCTGGGATGGGCAATGCTGACGATGAACAGCAG
GAAGAAGGCACTTCTTCCAAACAGGTGGTGAAGCAAGGCCTGCAGGAGAGGAGCAAGGAAGGAGATGTAGAGGAGCCCACTGATGACTCG
CTCCCCACGACTGGAGATGCTGGAGGCCGTGAGCCAATGGAAGAGAAACTCCTGGAAATCCAAGGGAAAATCGAAGCTGTGGAGATGCAC
TTGACCAGGGAACACATGAAGCGAGTCTTAGGAGAAGTGTATCTGCACACCTGGATCACAGAAAACACTAGCATCCCCACCCGCGGACTC
TGTAACTTTTTAATGTCTGATGAAGAGTATGATGACAGAACTGCACGGGTGCTGATTGGACATATCTCAAAGAAGATGAACAAACAGACT
TTCCCTGAGCACTGTAGTTTGTGTAAAGAGATCTTGCCATTCACAGATCGCAAACAGGCAGTCTGTTCCAATGGCCACATTTGGCTCCGG
CTCTTCGCGGCCAAGTGCAGCGGCTGCATGGAGAAGATCGCCCCCACCGAGTTCGTGATGCGGGCGCTGGAGTGCGTGTACCACCTGGGC
TGCTTCTGCTGCTGCGTGTGTGAACGGCAGCTACGCAAGGGCGACGAATTCGTGCTCAAGGAGGGCCAGCTGCTGTGCAAGGGTGACTAC
GAGAAGGAGAAGGACCTGCTCAGCTCCGTGAGCCCCGACGAGTCCGACTCCGTGAAGAGCGAGGATGAAGATGGGGACATGAAGCCGGCC
AAGGGGCAGGGCAGTCAGAGCAAGGGCAGCGGGGATGACGGGAAGGACCCGCGGAGGCCCAAGCGACCCCGGACCATCCTCACCACGCAG
CAGCGAAGAGCCTTCAAGGCCTCCTTCGAGGTCTCGTCGAAGCCTTGCCGAAAGGTCCGAGAGACACTGGCAGCTGAGACGGGCCTCAGT
GTGCGCGTGGTCCAGGTCTGGTTTCAGAACCAAAGAGCAAAGATGAAGAAGCTGGCGCGGCGGCACCAGCAGCAGCAGGAGCAGCAGAAC
TCCCAGCGGCTGGGCCAGGGTGAGCCGGGGCCGGGGCAGGGCCTGGGCCAGGAGGTCCTGTCCAGCCGCATGGAGGGCATGATGGCTTCC
TACACGCCGCTGGCCCCACCACAGCAGCAGATCGTGGCCATGGAACAGAGCCCCTACGGCAGCAGCGACCCCTTCCAGCAGGGCCTCACG
CCGCCCCAAATGCCAGGGAACGACTCCATCTTCCATGACATCGACAGCGATACCTCCTTAACCAGCCTCAGCGACTGCTTCCTCGGCTCC
TCAGACGTGGGCTCCCTGCAGGCCCGCGTGGGGAACCCCATCGACCGGCTCTACTCCATGCAGAGTTCCTACTTCGCCTCCTGAGAGCCA
GCCAGGCGCACGGACGCTTGGGCAGGGGCCTGGGGGGGACTGCCAGCCTCTGCGGCCAGCCTGGCCACCCCCGCCCTGCTCTCCGCACAG
ACTACAGACAGCCATACGGTGCCCTCCCCTCGGCCAGCTGGGCCTGACCACTGTGCCCGTTGGGTACAGCCAGACCGGTAGATGGGCACA
GCCTGGGCAGGGGCTGTGTCCTGCCCACAGAGACCTTGTCATCCCCAGGGACCCAGAGCTCTCGGACGGCCACTCGCCTCCCAGCCCCAC
CTCGGCCTCCATCGCCTCCTCCCCATCTCTTTTTTGGGAAGCTTAAATTCTCTCTATTTTTTTAAATGTCCTCTCTGTGTCCATGGCCCT
CCATGCAAGCCCCAGGACAATGGTGTCATGAGGCGGTGACCTGAGAAGCGTGTGTACCTGTGCCCCAGCAAGGGCAGGGGTGGCCTCTGG
GGGCAGGCCCACTGCCTGGAACCGCACACCCCTCAGCCTGAGTCTGGAGCAGCAGTGGAGAGGGGCCTGAGGGGAGGCACTGTCAGGAGG
CGGGCTCGGAGCCTGAGCCTGGGCAGGCGCAAAGGGACAGAGAGGCACGTGCAGACACATGCACACTTGCAGACAAACCCACGCAAACAC
ACACACAGCTGTATGGGGACACCAGAAGGGACAGGGATGCTCAGCGGGTCTGTCCTGCCTTGTCAGAAAGAGAAAAGGAGGCCAGGCAGG
GGACCCCCCAGTTCTTAAGAGCGATTGGAAAGGGAGGAAGGGGAGAGGAAGAGGCGAACTTGAAGCATCGGACCCAGTTGTATCCCAGCC
TGGGCCCAAATGGGGGCAGCCTGGGCAGGGAGGGCAGCCCCAGGCCCCACCAACTCTAGAGGCAGATGGAGCCCCCAGAACCAGGTAGCA
TCAGACCAGACAACAGAGCCTCCAGGGGTCAGGGACTTCAGAAGCACCTGCTGGGCACCCCATCTGCAATGTGGTCCTCTCCCCAGCCAC
CTCTGCCTCCCCTCACATACCTCCAGTGACAAGGAGCTCACTAGGTCAGCGAGCCCACAGCAGCTGTGCTGTCCTGCATCCCAGAGCCAG
GCTTCCCCAGCTCTCCCTCTTAACACTGTCCCCCAGCAGGCCTCCGGCTGTCCCTCTAAAGGTGTGGGGCAGGTATCACTTCACCTTCCC
ACTGATGTCAGCCGGCCAGAAGTGAGCAGGCACATCACCTCTCCTGCTGTGGCACCCTTCCTCTGTTAATTTGGCCCAAAAGACAATGAT
TTGGCCACATGACCTTAGAGATTCACCCTGCCCTGCTGTAGCTAAATCCCTGGGCCCCACACGCAAGTGACAGCTAAGCCACATCTGTTT
TCTGTGTATATGCAGGATGGGGGCACCTACTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTGAGAC
GGAGTTTCGCTCTTGTTGCCCAGGCTGGAGTGCAATGGCGCGATCTCGGCTCACCACAACCTCCGCCTCCCAGGTTCAAGTGATTCTGAT
GCCTCAGCCTCCCTAGTAGCTGAGATTACAGGCATGCGCCACCACACCCAGCTAATTTTGTATTTTTAGTAGCAACGGGGTTTCTCCATG
TTGGTCAGGCTGGTCTCCAACCCCCGACCTCAGGTGATCCGCCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCA
CCCAGTCTGCACTTACTGTTTAGACTGAATGAGGGACCGTGACCTCTTTCCTTTTCCATTCCTTCTTACTCGATTCATTCCAGCCTGTGG
AATTTCTCTGCACCCTGATTCAGTGACCACTGCTCTCCTCTCTCCCAGCACATCTGCCCAGTGAGGAGTTGGCCCTGGGTCTCACCTGAG
GTGTGTGGACCGGGCTGGCCTCTCCCTGTTTGACATTGGCCCATTAATGCATCCTCTTTGGGGGACACATTCCAATTGCATTTCCTGCCC
CCTTCTCCCAGGGCAATTGCAGAAGATTGTGTCAGGCGCCCTGCTGGAAGTCAGGTGCACTAGATCCATCCCCAGCCCCAGTCTGCTCAA
CTCTATCCCTGTCAGAGCAAGGAGGCTGGGCTGCTGGGGCCTGACTGGTGAGCCCACCCTGTCCCCTGGTGATCACTGTGTCCCCTTGTT
CAGGTGCTCACAACCCTACCTTTAACTCTGAGGTCAAGCCCTAGGCCACCACCCTAAAGTCTGCCTGGTCCAACCTTTGAGCAAGTAAGG
ATAATGAATGTCCCTTTTCCACCTTTGGGGCCCTCTGCCTGGATCTCTGGAATCCTCTAAGTTCAACCTGTTCTGTGGTTTTGCTCCCGT
TTGCTGGGAAATTCAGTCCCCCCAGAATGTCCTGGGCCAACCTCCTTGCCTGACATGTGGCCTCGTGTCACCCATTGGGCCCCAGCAGCC
AGCTAGCCCTTCTGCAGCTCTTCTTACAAACAGAGCCTCTCCAAGGACCTCAGTTGATGTTCTGGTCCTTCTGCCGCCTCAGCCCACCAG
GGTCCGTGCCACCATGGGTCTCTTGAGCAGCAGCTGCACTGGCTTCTGGAGAGACACCCCTCTTTCTCCTTTTGCACATGCACCATCTGA
ATCGTGCCAGGGACATCCTGGGCAGATTCAGGGGCAGATGCCCTATCCCCCAGGAGACCTGGCCCTTCTCTCTCAGACCCAATAAGTTGG
AAGGGACGTCAGAAGCGGTCATCTCATCTGCCCCTTATTTTATAGTTGGAAACCCTGAGGCAAGAGAGGGAAAGAGGCCTGTCCAAGGTC
CGGGTTAGTGACAGAGCTGAGCTGAGAACAGGGACGTTGTGCCCCACTGTCCCCTGTGGTTTGTGAATGACCTCCAGGTCAGGGGGTCAC
AACTTGTTCTTAGTAAACTTGCCAGCTGTTGGGGTCACATATTCCCATTCTGGGGCCTCACAAACCCCCGAATCCAGCCGGGACCCCATG
CCAGGAGCTGGTCTAGGGACAGCATGCTTGTGACCCACAGACTGTTAAAGCCAGAAGGGACCTCAGAGAGTCCCTTATGCTGGAGGCGCC
CTGTCAGCCGTGGCTAGGGGCCCCTTGCTCTATGCTGTGCCTTGCTGCCCACAGGCTCCCAGACACCAGTGCCCACTCTGCCCAGCCCCG
GACTGGGTGTGGCTCGCAGATGAACAAGATGCAGGGCCTGCCTTGAGGGGTGTCTCCTAGAAGGAAAGCCAGACTCTCCGGCCCAGCCAG
AGAGTCCAGACATGGCAGGGACCCGTTTCTCAGATGAGGAGCCTGAGGCTCAGAGAAGGGAGGCGATGTGTTCAGGGCCACCCAGCAGAA
GCCTGTGGGGCTGGGCAACCTTCTCCCACTTTATGGGAGGAGCTGCAGCCTTGGCTGGGAGCTGGGCGGGGAGTAGCCAGGACCACCCCT
TGCCCGTGCCGTGACATGGAACCTTCATCACTAAGGGGGCTGGAGTGGGAAGAGGGAGATAACTGTGTGGTCTCCAGAGCAAAAGAGAAT
GAGAGGTGGGCAGGGGGAGTCTTGGCAAAAGACCAAGTTCCACTTCCCTGCTGGGGAAGTCAAGGCTCAGAAAGAGGAAATAATTGCCCC
AGGTAACACAGGGCAGAGGAGGGACAAAAAGCTGGGCATGGCCCCAGCCAGAGCCTCATCTGCCTACTCCGTGAAGCCTCCCAGGTACTC
TGCTATCCTGGGAAACGCACAGGGAGGCCACACAGAGACACTGCTCACAAGAGTCAGACCAAGGTGCCAGCACAGCCTGGAAAGAGCTCA
GAAAGGGGGTTGGTGCACGTGGCTGGGCATCTTAGGAGGCTTCCTGAGGGTGGGTAAAGGTGGGAAGGCCCTGGCGCTGCATCAGATGAG
CAGGGCCTGGCAGGGACAAGCCTCTTCTCCTTTGGGAAGCCCTGCAGCCTCCTAGCAAGAGGCTGATTCCCCACTCTGCCCCCATCTGAA
TGTCCTTTTCATGTTGCACGCAGGGAACCTCAGGAAGGAGGATTGCCTGATGCCTGCCTGGCTCCATCCTTGAGCTCTGGGCACCACCTA
GGGTGAGGGAGAGCCTGCAGCTCTGGGGCTAAGTCTGCCCTGGGGGGAAAGGGCTCCACGCTCACACGCACGCGCTCGCACACACACACT
CACACCTGGACGCACACGGAGGCTTGCGGACCCATACTCACAGGCACATGTGGCCTGGGGACTGGGGGAGCAGGAAAGACCCCTCCAACA
TTTGGCCCTTGGAAGGCACCATTGCCAATGAGCCTCTTTGCTGGTTCCCCCGACCCCACCTGGGGGTCCCATGGGAGCCCAGCCCAGCCA
GGTGTGGGGATGGGCCACCGGCCATTCCTGTTTTCCTTGTACAGACAGATTCTCACTACCCACCCGCCATCCCCAGACACATTTTATTTA
ATAACTTGTCATTGTTAAATTATTTATTAGCGTTTACCACACCACCACCCCCACCCTGCCCTCCACTCTCACCTTCCACCTCTTCCCACA

>In-frame_GTF3C4_ENST00000372146_chr9_135559080_+_LMX1B_ENST00000561065_chr9_129453115_+_3872nt
CTTCCGGGTCCGGAACGGCTCCAGCTGTACGGACTCGTCCCGAGGGGAGCCGGGGACGGCGGCACCGGGCGGGTAGGGACAAGACTACCG
CGCGTGCCCCCGCCTGGTGGCAGCCCCTCTCTGCGTCCCTCGCGGCCTGGCAAAATTACATTCGGCCGAGAGTTCACGCTGGGGAAGCTC
TCTGAATGCCTCTGAGAAGCGAGATCCGGCGCCATCTCACCGACGAGCCTCCCCTTTACCGCCCCGTGCGTTTCCTCAGCACTTTAGGAA
CTAAAGCCTGTCTGGGTAGCTCCCTAACAGGCTCTGGAGCTCAATCCCTGGGCAGGGAAAAGGGGGTCCTCGGGGCTCCCCGCTCGCTGT
CCTTTTTCTGGACAGGCAGTTCCTTGGCCACCTGGTAGGGCCGCGTTGCCTGGCAACGGCGGGGTCCTTCTTGGCTCGGCGGCGCTCGGG
GCCTGAGGGGAGAAAACCGCCGCGGAGGGCGCTGGGGGTGGCGGCGGCGGTCCGGGAGGTGGTCGCGCGACTGCGTGGAGCGCCAGGGCG
TCCGACCTCTGCACCTGAGAGAAGATGAACACGGCCGACCAGGCCCGGGTGGGGCCCGCGGACGACGGGCCTGCGCCGTCTGGGGAGGAG
GAGGGAGAGGGGGGCGGCGAGGCGGGCGGGAAGGAGCCAGCAGCGGACGCGGCCCCGGGGCCCAGCGCTGCATTCCGCCTCATGGTGACT
CGGCGGGAGCCGGCCGTGAAGCTGCAGTATGCGGTGAGCGGCCTGGAACCGCTGGCTTGGTCCGAGGACCACCGCGTGTCTGTGTCCACG
GCCCGCAGCATCGCTGTGCTGGAGCTCATCTGCGACGTGCACAACCCGGGCCAGGACCTGGTTATCCACCGCACCTCGGTGCCCGCACCG
CTCAACAGCTGTCTCCTCAAAGTTGGCTCAAAAACAGAAGTTGCTGAGTGCAAGGAGAAATTCGCCGCCTCCAAGGACCCCACGGTCAGT
CAGACTTTCATGTTGGATAGGGTGTTCAACCCTGAGGGGAAGGCTTTACCACCAATGAGAGGATTCAAGTACACCAGCTGGTCTCCCATG
GGTTGCGATGCTAATGGCAGGTGCCTCTTGGCAGCACTGACCATGGACAATCGCCTGACCATCCAGGCAAATCTCAACAGACTGCAGTGG
GTCCAGCTGGTTGACCTGACTGAGATCTATGGAGAACGTCTTTATGAGACCAGTTACAGGCTCTCTAAAAATGAGGCCCCGGAAGGAAAT
CTCGGGGATTTTGCTGAGTTTCAGAGGAGACACAGCATGCAGACCCCAGTCAGAATGGAGTGGTCGGGCATCTGTACCACCCAGCAGGTC
AAGCATAACAACGAATGCCGGGACGTTGGCAGTGTGCTCCTGGCTGTCCTCTTTGAAAACGGTAATATCGCCGTGTGGCAGTTTCAGCTG
CCGTTTGTAGGAAAAGAATCCATCTCTTCATGCAACACAATTGAGTCAGGAATCACCTCTCCCAGTGTATTGTTTTGGTGGGAATATGAG
CACAATAATCGAAAAATGAGTGGCCTTATTGTGGGGAGTGCTTTTGGACCCATAAAAATTCTTCCTGTCAATCTCAAAGCAGTCAAAGGC
TATTTCACTTTAAGGCAGCCTGTTATCTTGTGGAAAGAAATGGACCAGTTACCTGTGCACAGTATCAAATGTGTGCCACTTTATCATCCT
TACCAGAAGTGTAGTTGCAGCTTAGTAGTGGCTGCAAGAGGCTCTTATGTATTTTGGTGTCTTCTTCTGATCTCCAAAGCAGGGCTGAAT
GTTCACAATTCCCATGTCACAGGCCTTCACTCACTGCCAATTGTCTCCATGACTGCAGACAAACAGAATGGAACAGTCTATACTTGCTCC
AGTGACGGAAAGGTGAGGCAGCTGATTCCCATTTTCACAGATGTTGCATTGAAGTTTGAACACCAGTTGATTAAACTCTCAGATGTGTTT
GGCTCAGTGAGGACTCACGGGATAGCAGTGAGCCCCTGCGGTGCATACCTGGCCATCATCACCACTGAGGGCATGATCAACGGCCTCCAC
CCTGTTAACAAAAACTACCAGGTCCAATTTGTTACTCTCAAAACCTTTGAAGAGGCAGCTGCTCAGCTCCTGGAATCTTCAGTTCAAAAC
CTTTTTAAGCAGGTAGATTTAATAGACCTAGTACGCTGGAAGATTTTAAAAGATAAACATATCCCTCAATTTTTACAAGAAGCTTTGGAA
AAAAAGATTGAAAGCAGTGGAGTCACCTATTTTTGGCGTTTTAAGCTTTTCCTCCTGAGGATTTTATATCAGTCAATGCAGAAAACCCCT
TCAGAAGCCTTGTGGAAACCCACCCATGAGGACTCAAAAATCTTACTAGTGGATTCGCCTGGGATGGGCAATGCTGACGATGAACAGCAG
GAAGAAGGCACTTCTTCCAAACAGGTGGTGAAGCAAGGCCTGCAGGAGAGGAGCAAGGAAGGAGATGTAGAGGAGCCCACTGATGACTCG
CTCCCCACGACTGGAGATGCTGGAGGCCGTGAGCCAATGGAAGAGAAACTCCTGGAAATCCAAGGGAAAATCGAAGCTGTGGAGATGCAC
TTGACCAGGGAACACATGAAGCGAGTCTTAGGAGAAGTGTATCTGCACACCTGGATCACAGAAAACACTAGCATCCCCACCCGCGGACTC
TGTAACTTTTTAATGTCTGATGAAGAGTATGATGACAGAACTGCACGGGTGCTGATTGGACATATCTCAAAGAAGATGAACAAACAGACT
TTCCCTGAGCACTGTAGTTTGTGTAAAGAGATCTTGCCATTCACAGATCGCAAACAGGCAGTCTGTTCCAATGGCCACATTTGGCTCCGG
CTCTTCGCGGCCAAGTGCAGCGGCTGCATGGAGAAGATCGCCCCCACCGAGTTCGTGATGCGGGCGCTGGAGTGCGTGTACCACCTGGGC
TGCTTCTGCTGCTGCGTGTGTGAACGGCAGCTACGCAAGGGCGACGAATTCGTGCTCAAGGAGGGCCAGCTGCTGTGCAAGGGTGACTAC
GAGAAGGAGAAGGACCTGCTCAGCTCCGTGAGCCCCGACGAGTCCGACTCCGTGAAGAGCGAGGATGAAGATGGGGACATGAAGCCGGCC
AAGGGGCAGGGCAGTCAGAGCAAGGGCAGCGGGGATGACGGGAAGGACCCGCGGAGGCCCAAGCGACCCCGGACCATCCTCACCACGCAG
CAGCGAAGAGCCTTCAAGGCCTCCTTCGAGGTCTCGTCGAAGCCTTGCCGAAAGGTCCGAGAGACACTGGCAGCTGAGACGGGCCTCAGT
GTGCGCGTGGTCCAGGTCTGGTTTCAGAACCAAAGAGCAAAGATGAAGAAGCTGGCGCGGCGGCACCAGCAGCAGCAGGAGCAGCAGAAC
TCCCAGCGGCTGGGCCAGGGTGAGCCGGGGCCGGGGCAGGGCCTGGGCCAGGAGGTCCTGTCCAGCCGCATGGAGGGCATGATGGCTTCC
TACACGCCGCTGGCCCCACCACAGCAGCAGATCGTGGCCATGGAACAGAGCCCCTACGGCAGCAGCGACCCCTTCCAGCAGGGCCTCACG
CCGCCCCAAATGCCAGGGAACGACTCCATCTTCCATGACATCGACAGCGATACCTCCTTAACCAGCCTCAGCGACTGCTTCCTCGGCTCC
TCAGACGTGGGCTCCCTGCAGGCCCGCGTGGGGAACCCCATCGACCGGCTCTACTCCATGCAGAGTTCCTACTTCGCCTCCTGAGAGCCA
GCCAGGCGCACGGACGCTTGGGCAGGGGCCTGGGGGGGACTGCCAGCCTCTGCGGCCAGCCTGGCCACCCCCGCCCTGCTCTCCGCACAG


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FusionGenePPI for GTF3C4_LMX1B


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page

.

check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors
GTF3C4TBP, POLR3C, GTF3C1, GTF3C2, GTF3C5, GTF3C3, POLR3F, HIST2H3A, GTF3C6, MYC, SMARCAD1, HNRNPK, PTRF, MSN, XPNPEP1, BARD1, BRCA1, METTL21C, METTL22, PPP6R1, API5, EHD4, EZR, EHD1, FKBP9, HEXA, HEXB, HK1, PLCG1, RAD23A, ZC3HC1, LIMD1, NOL3, PAPSS2, PROSC, RPL22, TUFM, WARS, TP53, EED, RNF2, NTRK1, SCARNA22, NOP56, CBX8, RBPJ, FOXB1, FOXJ2, FOXL1, FOXM1, FOXQ1, FOXS1, USP37, SENP3, DPPA4, NANOG, POU5F1, NFATC2, AURKA, ZNF785, USP15, SPAG9, MCM2, MCM4, MCM6, EPS15L1, IVNS1ABP, SMC1A, GAPVD1, ANK3, SBNO1, SMC3, HSF1, PLK1LMX1BSSBP3, APP, LDB1, MAB21L1, POTEF, ACTB, PKNOX2, PARS2, PBX1, PBX2, PBX3, MEIS1, MEIS2, SSBP2, SSBP4, IDI2, RBSN


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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RelatedDrugs for GTF3C4_LMX1B


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.0 2018-04-02)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for GTF3C4_LMX1B


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource
TgeneLMX1BC0027341Nail-Patella Syndrome6CTD_human;ORPHANET;UNIPROT
TgeneLMX1BC0033687Proteinuria2CTD_human;HPO
TgeneLMX1BC0004936Mental disorders1CTD_human
TgeneLMX1BC0009081Congenital clubfoot1CTD_human;HPO
TgeneLMX1BC0018965Hematuria1CTD_human;HPO
TgeneLMX1BC0020473Hyperlipidemia1CTD_human
TgeneLMX1BC0021603Sleep Initiation and Maintenance Disorders1CTD_human
TgeneLMX1BC0036341Schizophrenia1PSYGENET
TgeneLMX1BC1535926Neurodevelopmental Disorders1CTD_human