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Fusion gene ID: 15625 |
FusionGeneSummary for GTF2F2_GPALPP1 |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: GTF2F2_GPALPP1 | Fusion gene ID: 15625 | Hgene | Tgene | Gene symbol | GTF2F2 | GPALPP1 | Gene ID | 2963 | 55425 |
| Gene name | general transcription factor IIF subunit 2 | GPALPP motifs containing 1 | |
| Synonyms | BTF4|RAP30|TF2F2|TFIIF | AD029|KIAA1704|LSR7|bA245H20.2 | |
| Cytomap | 13q14.12-q14.13 | 13q14.12 | |
| Type of gene | protein-coding | protein-coding | |
| Description | general transcription factor IIF subunit 2ATP-dependent helicase GTF2F2TFIIF-betageneral transcription factor IIF 30 kDa subunitgeneral transcription factor IIF, polypeptide 2, 30kDatranscription initiation factor IIF subunit betatranscription initi | GPALPP motifs-containing protein 1lipopolysaccharide specific response-7 proteinlipopolysaccharide-specific response protein 7 | |
| Modification date | 20180523 | 20180519 | |
| UniProtAcc | P13984 | Q8IXQ4 | |
| Ensembl transtripts involved in fusion gene | ENST00000340473, ENST00000494087, | ENST00000379151, ENST00000361121, ENST00000357537, ENST00000473119, | |
| Fusion gene scores | * DoF score | 8 X 4 X 6=192 | 1 X 2 X 2=4 |
| # samples | 7 | 2 | |
| ** MAII score | log2(7/192*10)=-1.45567948377619 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(2/4*10)=2.32192809488736 | |
| Context | PubMed: GTF2F2 [Title/Abstract] AND GPALPP1 [Title/Abstract] AND fusion [Title/Abstract] | ||
| Functional or gene categories assigned by FusionGDB annotation | |||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| TCGA | LD | LIHC | TCGA-DD-AADA-01A | GTF2F2 | chr13 | 45827105 | + | GPALPP1 | chr13 | 45589087 | + |
| TCGA | LD | LUSC | TCGA-56-A4BX-01A | GTF2F2 | chr13 | 45725966 | + | GPALPP1 | chr13 | 45578440 | + |
| * LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
| Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| In-frame | ENST00000340473 | ENST00000379151 | GTF2F2 | chr13 | 45827105 | + | GPALPP1 | chr13 | 45589087 | + |
| In-frame | ENST00000340473 | ENST00000361121 | GTF2F2 | chr13 | 45827105 | + | GPALPP1 | chr13 | 45589087 | + |
| 5CDS-5UTR | ENST00000340473 | ENST00000357537 | GTF2F2 | chr13 | 45827105 | + | GPALPP1 | chr13 | 45589087 | + |
| 5CDS-intron | ENST00000340473 | ENST00000473119 | GTF2F2 | chr13 | 45827105 | + | GPALPP1 | chr13 | 45589087 | + |
| 3UTR-3CDS | ENST00000494087 | ENST00000379151 | GTF2F2 | chr13 | 45827105 | + | GPALPP1 | chr13 | 45589087 | + |
| 3UTR-3CDS | ENST00000494087 | ENST00000361121 | GTF2F2 | chr13 | 45827105 | + | GPALPP1 | chr13 | 45589087 | + |
| 3UTR-5UTR | ENST00000494087 | ENST00000357537 | GTF2F2 | chr13 | 45827105 | + | GPALPP1 | chr13 | 45589087 | + |
| 3UTR-intron | ENST00000494087 | ENST00000473119 | GTF2F2 | chr13 | 45827105 | + | GPALPP1 | chr13 | 45589087 | + |
| In-frame | ENST00000340473 | ENST00000379151 | GTF2F2 | chr13 | 45725966 | + | GPALPP1 | chr13 | 45578440 | + |
| In-frame | ENST00000340473 | ENST00000361121 | GTF2F2 | chr13 | 45725966 | + | GPALPP1 | chr13 | 45578440 | + |
| 5CDS-intron | ENST00000340473 | ENST00000357537 | GTF2F2 | chr13 | 45725966 | + | GPALPP1 | chr13 | 45578440 | + |
| 5CDS-intron | ENST00000340473 | ENST00000473119 | GTF2F2 | chr13 | 45725966 | + | GPALPP1 | chr13 | 45578440 | + |
| intron-3CDS | ENST00000494087 | ENST00000379151 | GTF2F2 | chr13 | 45725966 | + | GPALPP1 | chr13 | 45578440 | + |
| intron-3CDS | ENST00000494087 | ENST00000361121 | GTF2F2 | chr13 | 45725966 | + | GPALPP1 | chr13 | 45578440 | + |
| intron-intron | ENST00000494087 | ENST00000357537 | GTF2F2 | chr13 | 45725966 | + | GPALPP1 | chr13 | 45578440 | + |
| intron-intron | ENST00000494087 | ENST00000473119 | GTF2F2 | chr13 | 45725966 | + | GPALPP1 | chr13 | 45578440 | + |
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FusionProtFeatures for GTF2F2_GPALPP1 |
| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| GTF2F2 | GPALPP1 |
| TFIIF is a general transcription initiation factor thatbinds to RNA polymerase II and helps to recruit it to theinitiation complex in collaboration with TFIIB. It promotestranscription elongation. This subunit shows ATP-dependent DNA-helicase activity. {ECO:0000269|PubMed:2477704}. |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
| - In-frame and retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | GTF2F2 | chr13:45725966 | chr13:45578440 | ENST00000340473 | + | 4 | 8 | 36_43 | 101 | 250 | Nucleotide binding | ATP |
| Hgene | GTF2F2 | chr13:45827105 | chr13:45589087 | ENST00000340473 | + | 6 | 8 | 36_43 | 162 | 250 | Nucleotide binding | ATP |
| Tgene | >GPALPP1 | chr13:45725966 | chr13:45578440 | ENST00000357537 | + | 0 | 8 | 41_49 | -141 | 251 | Compositional bias | Note=Poly-Ser |
| Tgene | >GPALPP1 | chr13:45725966 | chr13:45578440 | ENST00000357537 | + | 0 | 8 | 81_88 | -141 | 251 | Compositional bias | Note=Poly-Asp |
| Tgene | >GPALPP1 | chr13:45725966 | chr13:45578440 | ENST00000361121 | + | 0 | 12 | 41_49 | 29 | 1182 | Compositional bias | Note=Poly-Ser |
| Tgene | >GPALPP1 | chr13:45725966 | chr13:45578440 | ENST00000361121 | + | 0 | 12 | 81_88 | 29 | 1182 | Compositional bias | Note=Poly-Asp |
| Tgene | >GPALPP1 | chr13:45725966 | chr13:45578440 | ENST00000379151 | + | 0 | 8 | 41_49 | 29 | 341 | Compositional bias | Note=Poly-Ser |
| Tgene | >GPALPP1 | chr13:45725966 | chr13:45578440 | ENST00000379151 | + | 0 | 8 | 81_88 | 29 | 341 | Compositional bias | Note=Poly-Asp |
| Tgene | >GPALPP1 | chr13:45827105 | chr13:45589087 | ENST00000357537 | + | 2 | 8 | 41_49 | -34 | 251 | Compositional bias | Note=Poly-Ser |
| Tgene | >GPALPP1 | chr13:45827105 | chr13:45589087 | ENST00000357537 | + | 2 | 8 | 81_88 | -34 | 251 | Compositional bias | Note=Poly-Asp |
| Tgene | >GPALPP1 | chr13:45725966 | chr13:45578440 | ENST00000357537 | + | 0 | 8 | 112_117 | -141 | 251 | Motif | Note=GPALPP motif 4 |
| Tgene | >GPALPP1 | chr13:45725966 | chr13:45578440 | ENST00000357537 | + | 0 | 8 | 32_37 | -141 | 251 | Motif | Note=GPALPP motif 2 |
| Tgene | >GPALPP1 | chr13:45725966 | chr13:45578440 | ENST00000357537 | + | 0 | 8 | 7_12 | -141 | 251 | Motif | Note=GPALPP motif 1 |
| Tgene | >GPALPP1 | chr13:45725966 | chr13:45578440 | ENST00000357537 | + | 0 | 8 | 92_97 | -141 | 251 | Motif | Note=GPALPP motif 3 |
| Tgene | >GPALPP1 | chr13:45725966 | chr13:45578440 | ENST00000361121 | + | 0 | 12 | 112_117 | 29 | 1182 | Motif | Note=GPALPP motif 4 |
| Tgene | >GPALPP1 | chr13:45725966 | chr13:45578440 | ENST00000361121 | + | 0 | 12 | 32_37 | 29 | 1182 | Motif | Note=GPALPP motif 2 |
| Tgene | >GPALPP1 | chr13:45725966 | chr13:45578440 | ENST00000361121 | + | 0 | 12 | 92_97 | 29 | 1182 | Motif | Note=GPALPP motif 3 |
| Tgene | >GPALPP1 | chr13:45725966 | chr13:45578440 | ENST00000379151 | + | 0 | 8 | 112_117 | 29 | 341 | Motif | Note=GPALPP motif 4 |
| Tgene | >GPALPP1 | chr13:45725966 | chr13:45578440 | ENST00000379151 | + | 0 | 8 | 32_37 | 29 | 341 | Motif | Note=GPALPP motif 2 |
| Tgene | >GPALPP1 | chr13:45725966 | chr13:45578440 | ENST00000379151 | + | 0 | 8 | 92_97 | 29 | 341 | Motif | Note=GPALPP motif 3 |
| Tgene | >GPALPP1 | chr13:45827105 | chr13:45589087 | ENST00000357537 | + | 2 | 8 | 112_117 | -34 | 251 | Motif | Note=GPALPP motif 4 |
| Tgene | >GPALPP1 | chr13:45827105 | chr13:45589087 | ENST00000357537 | + | 2 | 8 | 32_37 | -34 | 251 | Motif | Note=GPALPP motif 2 |
| Tgene | >GPALPP1 | chr13:45827105 | chr13:45589087 | ENST00000357537 | + | 2 | 8 | 7_12 | -34 | 251 | Motif | Note=GPALPP motif 1 |
| Tgene | >GPALPP1 | chr13:45827105 | chr13:45589087 | ENST00000357537 | + | 2 | 8 | 92_97 | -34 | 251 | Motif | Note=GPALPP motif 3 |
| - In-frame and not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Tgene | GPALPP1 | chr13:45827105 | chr13:45589087 | ENST00000361121 | + | 3 | 12 | 41_49 | 136 | 1182 | Compositional bias | Note=Poly-Ser |
| Tgene | GPALPP1 | chr13:45827105 | chr13:45589087 | ENST00000361121 | + | 3 | 12 | 81_88 | 136 | 1182 | Compositional bias | Note=Poly-Asp |
| Tgene | GPALPP1 | chr13:45827105 | chr13:45589087 | ENST00000379151 | + | 3 | 8 | 41_49 | 136 | 341 | Compositional bias | Note=Poly-Ser |
| Tgene | GPALPP1 | chr13:45827105 | chr13:45589087 | ENST00000379151 | + | 3 | 8 | 81_88 | 136 | 341 | Compositional bias | Note=Poly-Asp |
| Tgene | GPALPP1 | chr13:45725966 | chr13:45578440 | ENST00000361121 | + | 0 | 12 | 7_12 | 29 | 1182 | Motif | Note=GPALPP motif 1 |
| Tgene | GPALPP1 | chr13:45725966 | chr13:45578440 | ENST00000379151 | + | 0 | 8 | 7_12 | 29 | 341 | Motif | Note=GPALPP motif 1 |
| Tgene | GPALPP1 | chr13:45827105 | chr13:45589087 | ENST00000361121 | + | 3 | 12 | 112_117 | 136 | 1182 | Motif | Note=GPALPP motif 4 |
| Tgene | GPALPP1 | chr13:45827105 | chr13:45589087 | ENST00000361121 | + | 3 | 12 | 32_37 | 136 | 1182 | Motif | Note=GPALPP motif 2 |
| Tgene | GPALPP1 | chr13:45827105 | chr13:45589087 | ENST00000361121 | + | 3 | 12 | 7_12 | 136 | 1182 | Motif | Note=GPALPP motif 1 |
| Tgene | GPALPP1 | chr13:45827105 | chr13:45589087 | ENST00000361121 | + | 3 | 12 | 92_97 | 136 | 1182 | Motif | Note=GPALPP motif 3 |
| Tgene | GPALPP1 | chr13:45827105 | chr13:45589087 | ENST00000379151 | + | 3 | 8 | 112_117 | 136 | 341 | Motif | Note=GPALPP motif 4 |
| Tgene | GPALPP1 | chr13:45827105 | chr13:45589087 | ENST00000379151 | + | 3 | 8 | 32_37 | 136 | 341 | Motif | Note=GPALPP motif 2 |
| Tgene | GPALPP1 | chr13:45827105 | chr13:45589087 | ENST00000379151 | + | 3 | 8 | 7_12 | 136 | 341 | Motif | Note=GPALPP motif 1 |
| Tgene | GPALPP1 | chr13:45827105 | chr13:45589087 | ENST00000379151 | + | 3 | 8 | 92_97 | 136 | 341 | Motif | Note=GPALPP motif 3 |
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FusionGeneSequence for GTF2F2_GPALPP1 |
| For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
| * Fusion amino acid sequences. |
| >In-frame_GTF2F2_ENST00000340473_chr13_45827105_+_GPALPP1_ENST00000379151_chr13_45589087_+_367aa MAERGELDLTGAKQNTGVWLVKVPKYLSQQWAKASGRGEVGKLRIAKTQGRTEVSFTLNEDLANIHDIGGKPASVSAPREHPFVLQSVGG QTLTVFTESSSDKLSLEGIVVQRAECRPAASENYMRLKRLQIEESSKPVRLSQQLDKVVTTNYKPVANHQYNETDSSEDEDIIGPMPAKG PVNYNVTTEFEKRAQRMKEKLTKGDDDSSKPIVRESWMTELPPEMKDFGLGPRTFKRRADDTSGDRSIWTDTPADRERKAKETQEARKSS SKKDEEHILSGRDKRLAEQVSSYNESKRSESLMDIHHKKLKSKAAEDKNKPQERIPFDRDKDLKVNRFDEAQKKALIKKSRELNTRFSHG >In-frame_GTF2F2_ENST00000340473_chr13_45827105_+_GPALPP1_ENST00000361121_chr13_45589087_+_367aa MAERGELDLTGAKQNTGVWLVKVPKYLSQQWAKASGRGEVGKLRIAKTQGRTEVSFTLNEDLANIHDIGGKPASVSAPREHPFVLQSVGG QTLTVFTESSSDKLSLEGIVVQRAECRPAASENYMRLKRLQIEESSKPVRLSQQLDKVVTTNYKPVANHQYNETDSSEDEDIIGPMPAKG PVNYNVTTEFEKRAQRMKEKLTKGDDDSSKPIVRESWMTELPPEMKDFGLGPRTFKRRADDTSGDRSIWTDTPADRERKAKETQEARKSS SKKDEEHILSGRDKRLAEQVSSYNESKRSESLMDIHHKKLKSKAAEDKNKPQERIPFDRDKDLKVNRFDEAQKKALIKKSRELNTRFSHG >In-frame_GTF2F2_ENST00000340473_chr13_45725966_+_GPALPP1_ENST00000379151_chr13_45578440_+_413aa MAERGELDLTGAKQNTGVWLVKVPKYLSQQWAKASGRGEVGKLRIAKTQGRTEVSFTLNEDLANIHDIGGKPASVSAPREHPFVLQSVGG QTLTVFTESSSVAGPALPPNYKSSSSDSSDSDEDSSSLYEEGNQESEEDDSGPTARKQRKNQDDDDDDDDGFFGPALPPGFKKQDDSPPR PIIGPALPPGFIKSTQKSDKGRDDPGQQETDSSEDEDIIGPMPAKGPVNYNVTTEFEKRAQRMKEKLTKGDDDSSKPIVRESWMTELPPE MKDFGLGPRTFKRRADDTSGDRSIWTDTPADRERKAKETQEARKSSSKKDEEHILSGRDKRLAEQVSSYNESKRSESLMDIHHKKLKSKA >In-frame_GTF2F2_ENST00000340473_chr13_45725966_+_GPALPP1_ENST00000361121_chr13_45578440_+_413aa MAERGELDLTGAKQNTGVWLVKVPKYLSQQWAKASGRGEVGKLRIAKTQGRTEVSFTLNEDLANIHDIGGKPASVSAPREHPFVLQSVGG QTLTVFTESSSVAGPALPPNYKSSSSDSSDSDEDSSSLYEEGNQESEEDDSGPTARKQRKNQDDDDDDDDGFFGPALPPGFKKQDDSPPR PIIGPALPPGFIKSTQKSDKGRDDPGQQETDSSEDEDIIGPMPAKGPVNYNVTTEFEKRAQRMKEKLTKGDDDSSKPIVRESWMTELPPE MKDFGLGPRTFKRRADDTSGDRSIWTDTPADRERKAKETQEARKSSSKKDEEHILSGRDKRLAEQVSSYNESKRSESLMDIHHKKLKSKA |
| * Fusion transcript sequences (only coding sequence (CDS) region). |
| >In-frame_GTF2F2_ENST00000340473_chr13_45827105_+_GPALPP1_ENST00000379151_chr13_45589087_+_1101nt ATGGCCGAGCGCGGGGAACTCGACTTGACCGGCGCCAAACAGAACACAGGAGTGTGGCTAGTCAAGGTTCCTAAATATTTGTCACAGCAA TGGGCTAAAGCCTCTGGAAGAGGTGAAGTTGGGAAACTGCGGATTGCCAAGACTCAAGGAAGGACTGAGGTGTCATTTACTTTGAATGAG GATCTTGCAAATATTCATGATATTGGTGGAAAACCAGCTTCAGTCAGTGCTCCTAGAGAACATCCATTTGTCTTGCAAAGTGTTGGAGGA CAGACATTAACAGTATTTACTGAGAGCTCATCAGATAAGCTGTCATTGGAAGGAATAGTGGTACAAAGAGCTGAATGCCGACCAGCTGCC AGTGAAAACTACATGCGATTAAAAAGATTGCAAATAGAAGAGTCTTCCAAACCAGTGAGGCTATCACAACAGCTGGACAAAGTTGTAACA ACCAATTACAAACCTGTTGCTAATCATCAATACAATGAAACAGACAGCAGTGAAGATGAGGATATTATTGGACCAATGCCTGCAAAAGGA CCAGTTAACTATAATGTAACGACAGAGTTTGAAAAAAGGGCCCAGAGAATGAAAGAAAAACTGACCAAAGGAGATGATGATTCATCTAAA CCCATTGTAAGAGAGTCATGGATGACTGAACTTCCTCCAGAAATGAAAGACTTTGGTCTTGGGCCAAGGACTTTTAAGAGAAGAGCTGAT GACACATCTGGAGATCGATCAATCTGGACAGATACTCCAGCTGATAGGGAAAGGAAAGCTAAGGAAACACAAGAAGCAAGGAAGTCATCC AGTAAGAAAGATGAAGAACATATATTATCAGGAAGAGATAAGAGACTGGCTGAGCAGGTATCTTCATACAATGAATCAAAAAGATCAGAA TCTCTTATGGACATACATCATAAAAAGTTAAAGAGTAAGGCTGCTGAAGACAAAAATAAGCCTCAAGAGAGAATACCATTTGACCGTGAT AAAGATCTCAAGGTTAATCGGTTTGATGAAGCTCAGAAAAAAGCCCTAATAAAAAAATCTAGAGAACTAAACACCAGATTTTCACACGGC >In-frame_GTF2F2_ENST00000340473_chr13_45827105_+_GPALPP1_ENST00000361121_chr13_45589087_+_1101nt ATGGCCGAGCGCGGGGAACTCGACTTGACCGGCGCCAAACAGAACACAGGAGTGTGGCTAGTCAAGGTTCCTAAATATTTGTCACAGCAA TGGGCTAAAGCCTCTGGAAGAGGTGAAGTTGGGAAACTGCGGATTGCCAAGACTCAAGGAAGGACTGAGGTGTCATTTACTTTGAATGAG GATCTTGCAAATATTCATGATATTGGTGGAAAACCAGCTTCAGTCAGTGCTCCTAGAGAACATCCATTTGTCTTGCAAAGTGTTGGAGGA CAGACATTAACAGTATTTACTGAGAGCTCATCAGATAAGCTGTCATTGGAAGGAATAGTGGTACAAAGAGCTGAATGCCGACCAGCTGCC AGTGAAAACTACATGCGATTAAAAAGATTGCAAATAGAAGAGTCTTCCAAACCAGTGAGGCTATCACAACAGCTGGACAAAGTTGTAACA ACCAATTACAAACCTGTTGCTAATCATCAATACAATGAAACAGACAGCAGTGAAGATGAGGATATTATTGGACCAATGCCTGCAAAAGGA CCAGTTAACTATAATGTAACGACAGAGTTTGAAAAAAGGGCCCAGAGAATGAAAGAAAAACTGACCAAAGGAGATGATGATTCATCTAAA CCCATTGTAAGAGAGTCATGGATGACTGAACTTCCTCCAGAAATGAAAGACTTTGGTCTTGGGCCAAGGACTTTTAAGAGAAGAGCTGAT GACACATCTGGAGATCGATCAATCTGGACAGATACTCCAGCTGATAGGGAAAGGAAAGCTAAGGAAACACAAGAAGCAAGGAAGTCATCC AGTAAGAAAGATGAAGAACATATATTATCAGGAAGAGATAAGAGACTGGCTGAGCAGGTATCTTCATACAATGAATCAAAAAGATCAGAA TCTCTTATGGACATACATCATAAAAAGTTAAAGAGTAAGGCTGCTGAAGACAAAAATAAGCCTCAAGAGAGAATACCATTTGACCGTGAT AAAGATCTCAAGGTTAATCGGTTTGATGAAGCTCAGAAAAAAGCCCTAATAAAAAAATCTAGAGAACTAAACACCAGATTTTCACACGGC >In-frame_GTF2F2_ENST00000340473_chr13_45725966_+_GPALPP1_ENST00000379151_chr13_45578440_+_1239nt ATGGCCGAGCGCGGGGAACTCGACTTGACCGGCGCCAAACAGAACACAGGAGTGTGGCTAGTCAAGGTTCCTAAATATTTGTCACAGCAA TGGGCTAAAGCCTCTGGAAGAGGTGAAGTTGGGAAACTGCGGATTGCCAAGACTCAAGGAAGGACTGAGGTGTCATTTACTTTGAATGAG GATCTTGCAAATATTCATGATATTGGTGGAAAACCAGCTTCAGTCAGTGCTCCTAGAGAACATCCATTTGTCTTGCAAAGTGTTGGAGGA CAGACATTAACAGTATTTACTGAGAGCTCATCAGTTGCAGGACCAGCTCTGCCCCCTAATTATAAAAGCAGTAGTTCAGATTCATCAGAC AGCGATGAAGACAGTAGTTCTTTGTACGAAGAAGGAAATCAAGAATCTGAAGAAGATGACAGTGGTCCAACTGCAAGAAAACAGAGGAAA AATCAGGATGATGACGATGATGATGATGATGGGTTTTTTGGACCAGCCCTTCCTCCTGGATTTAAAAAGCAGGATGATTCTCCTCCAAGG CCCATAATAGGTCCTGCATTGCCACCTGGTTTCATTAAATCTACACAGAAAAGTGACAAGGGCAGAGATGATCCAGGACAACAGGAAACA GACAGCAGTGAAGATGAGGATATTATTGGACCAATGCCTGCAAAAGGACCAGTTAACTATAATGTAACGACAGAGTTTGAAAAAAGGGCC CAGAGAATGAAAGAAAAACTGACCAAAGGAGATGATGATTCATCTAAACCCATTGTAAGAGAGTCATGGATGACTGAACTTCCTCCAGAA ATGAAAGACTTTGGTCTTGGGCCAAGGACTTTTAAGAGAAGAGCTGATGACACATCTGGAGATCGATCAATCTGGACAGATACTCCAGCT GATAGGGAAAGGAAAGCTAAGGAAACACAAGAAGCAAGGAAGTCATCCAGTAAGAAAGATGAAGAACATATATTATCAGGAAGAGATAAG AGACTGGCTGAGCAGGTATCTTCATACAATGAATCAAAAAGATCAGAATCTCTTATGGACATACATCATAAAAAGTTAAAGAGTAAGGCT GCTGAAGACAAAAATAAGCCTCAAGAGAGAATACCATTTGACCGTGATAAAGATCTCAAGGTTAATCGGTTTGATGAAGCTCAGAAAAAA >In-frame_GTF2F2_ENST00000340473_chr13_45725966_+_GPALPP1_ENST00000361121_chr13_45578440_+_1239nt ATGGCCGAGCGCGGGGAACTCGACTTGACCGGCGCCAAACAGAACACAGGAGTGTGGCTAGTCAAGGTTCCTAAATATTTGTCACAGCAA TGGGCTAAAGCCTCTGGAAGAGGTGAAGTTGGGAAACTGCGGATTGCCAAGACTCAAGGAAGGACTGAGGTGTCATTTACTTTGAATGAG GATCTTGCAAATATTCATGATATTGGTGGAAAACCAGCTTCAGTCAGTGCTCCTAGAGAACATCCATTTGTCTTGCAAAGTGTTGGAGGA CAGACATTAACAGTATTTACTGAGAGCTCATCAGTTGCAGGACCAGCTCTGCCCCCTAATTATAAAAGCAGTAGTTCAGATTCATCAGAC AGCGATGAAGACAGTAGTTCTTTGTACGAAGAAGGAAATCAAGAATCTGAAGAAGATGACAGTGGTCCAACTGCAAGAAAACAGAGGAAA AATCAGGATGATGACGATGATGATGATGATGGGTTTTTTGGACCAGCCCTTCCTCCTGGATTTAAAAAGCAGGATGATTCTCCTCCAAGG CCCATAATAGGTCCTGCATTGCCACCTGGTTTCATTAAATCTACACAGAAAAGTGACAAGGGCAGAGATGATCCAGGACAACAGGAAACA GACAGCAGTGAAGATGAGGATATTATTGGACCAATGCCTGCAAAAGGACCAGTTAACTATAATGTAACGACAGAGTTTGAAAAAAGGGCC CAGAGAATGAAAGAAAAACTGACCAAAGGAGATGATGATTCATCTAAACCCATTGTAAGAGAGTCATGGATGACTGAACTTCCTCCAGAA ATGAAAGACTTTGGTCTTGGGCCAAGGACTTTTAAGAGAAGAGCTGATGACACATCTGGAGATCGATCAATCTGGACAGATACTCCAGCT GATAGGGAAAGGAAAGCTAAGGAAACACAAGAAGCAAGGAAGTCATCCAGTAAGAAAGATGAAGAACATATATTATCAGGAAGAGATAAG AGACTGGCTGAGCAGGTATCTTCATACAATGAATCAAAAAGATCAGAATCTCTTATGGACATACATCATAAAAAGTTAAAGAGTAAGGCT GCTGAAGACAAAAATAAGCCTCAAGAGAGAATACCATTTGACCGTGATAAAGATCTCAAGGTTAATCGGTTTGATGAAGCTCAGAAAAAA |
| * Fusion transcript sequences (Full-length transcript). |
| >In-frame_GTF2F2_ENST00000340473_chr13_45827105_+_GPALPP1_ENST00000379151_chr13_45589087_+_1509nt TTCCCAGTGTTCTGGCAGGTAAGGAACGCCGGCTCTTCGCCTCTCAGCGCGGCTTGTCCTTTGTTCCGGACGCCCGCTCCTCAGCCCTGC GGCTCCTGGGGTCGCTGCTGCATCCCGCACGCCTCCACCGGCTGCAGACCCATGGCCGAGCGCGGGGAACTCGACTTGACCGGCGCCAAA CAGAACACAGGAGTGTGGCTAGTCAAGGTTCCTAAATATTTGTCACAGCAATGGGCTAAAGCCTCTGGAAGAGGTGAAGTTGGGAAACTG CGGATTGCCAAGACTCAAGGAAGGACTGAGGTGTCATTTACTTTGAATGAGGATCTTGCAAATATTCATGATATTGGTGGAAAACCAGCT TCAGTCAGTGCTCCTAGAGAACATCCATTTGTCTTGCAAAGTGTTGGAGGACAGACATTAACAGTATTTACTGAGAGCTCATCAGATAAG CTGTCATTGGAAGGAATAGTGGTACAAAGAGCTGAATGCCGACCAGCTGCCAGTGAAAACTACATGCGATTAAAAAGATTGCAAATAGAA GAGTCTTCCAAACCAGTGAGGCTATCACAACAGCTGGACAAAGTTGTAACAACCAATTACAAACCTGTTGCTAATCATCAATACAATGAA ACAGACAGCAGTGAAGATGAGGATATTATTGGACCAATGCCTGCAAAAGGACCAGTTAACTATAATGTAACGACAGAGTTTGAAAAAAGG GCCCAGAGAATGAAAGAAAAACTGACCAAAGGAGATGATGATTCATCTAAACCCATTGTAAGAGAGTCATGGATGACTGAACTTCCTCCA GAAATGAAAGACTTTGGTCTTGGGCCAAGGACTTTTAAGAGAAGAGCTGATGACACATCTGGAGATCGATCAATCTGGACAGATACTCCA GCTGATAGGGAAAGGAAAGCTAAGGAAACACAAGAAGCAAGGAAGTCATCCAGTAAGAAAGATGAAGAACATATATTATCAGGAAGAGAT AAGAGACTGGCTGAGCAGGTATCTTCATACAATGAATCAAAAAGATCAGAATCTCTTATGGACATACATCATAAAAAGTTAAAGAGTAAG GCTGCTGAAGACAAAAATAAGCCTCAAGAGAGAATACCATTTGACCGTGATAAAGATCTCAAGGTTAATCGGTTTGATGAAGCTCAGAAA AAAGCCCTAATAAAAAAATCTAGAGAACTAAACACCAGATTTTCACACGGCAAAGGCAATATGTTTTTATAAGTAAGTATATTTCAGTGA GGTATATTTTAATACTGATCAATGTGAACTTTTCTAAATACTCTATTGTCTTTAATAATTGTGCTGAAATCTATTTCCTTTTATAATAGA TTAAAAATTTTATATTTTTATAAGTAAACAGTGATTTTTGAAAAGTCAGCCTTGTGGGATGAAAAATATGTCTTACTGGAAAAATCCCTC >In-frame_GTF2F2_ENST00000340473_chr13_45827105_+_GPALPP1_ENST00000361121_chr13_45589087_+_4209nt TTCCCAGTGTTCTGGCAGGTAAGGAACGCCGGCTCTTCGCCTCTCAGCGCGGCTTGTCCTTTGTTCCGGACGCCCGCTCCTCAGCCCTGC GGCTCCTGGGGTCGCTGCTGCATCCCGCACGCCTCCACCGGCTGCAGACCCATGGCCGAGCGCGGGGAACTCGACTTGACCGGCGCCAAA CAGAACACAGGAGTGTGGCTAGTCAAGGTTCCTAAATATTTGTCACAGCAATGGGCTAAAGCCTCTGGAAGAGGTGAAGTTGGGAAACTG CGGATTGCCAAGACTCAAGGAAGGACTGAGGTGTCATTTACTTTGAATGAGGATCTTGCAAATATTCATGATATTGGTGGAAAACCAGCT TCAGTCAGTGCTCCTAGAGAACATCCATTTGTCTTGCAAAGTGTTGGAGGACAGACATTAACAGTATTTACTGAGAGCTCATCAGATAAG CTGTCATTGGAAGGAATAGTGGTACAAAGAGCTGAATGCCGACCAGCTGCCAGTGAAAACTACATGCGATTAAAAAGATTGCAAATAGAA GAGTCTTCCAAACCAGTGAGGCTATCACAACAGCTGGACAAAGTTGTAACAACCAATTACAAACCTGTTGCTAATCATCAATACAATGAA ACAGACAGCAGTGAAGATGAGGATATTATTGGACCAATGCCTGCAAAAGGACCAGTTAACTATAATGTAACGACAGAGTTTGAAAAAAGG GCCCAGAGAATGAAAGAAAAACTGACCAAAGGAGATGATGATTCATCTAAACCCATTGTAAGAGAGTCATGGATGACTGAACTTCCTCCA GAAATGAAAGACTTTGGTCTTGGGCCAAGGACTTTTAAGAGAAGAGCTGATGACACATCTGGAGATCGATCAATCTGGACAGATACTCCA GCTGATAGGGAAAGGAAAGCTAAGGAAACACAAGAAGCAAGGAAGTCATCCAGTAAGAAAGATGAAGAACATATATTATCAGGAAGAGAT AAGAGACTGGCTGAGCAGGTATCTTCATACAATGAATCAAAAAGATCAGAATCTCTTATGGACATACATCATAAAAAGTTAAAGAGTAAG GCTGCTGAAGACAAAAATAAGCCTCAAGAGAGAATACCATTTGACCGTGATAAAGATCTCAAGGTTAATCGGTTTGATGAAGCTCAGAAA AAAGCCCTAATAAAAAAATCTAGAGAACTAAACACCAGATTTTCACACGGCAAAGGCAATATGTTTTTATAAGGGGATTTCCCTGTGCAA TGAAGAAAAGTTGAAGAATACTCTTTGTCCATCTTTATTTCTTTGTTTTTGGCTTCTTAAGATTAGAGATTACTTTAATCTTAAAAAACA TACAAATTTACCTTGTTCTGTATGTCCTTTTAAGGTCATGTGGAAACATAAAACGAATGTTTTTTATGTAGAACAGAATATTCTATGTGC CTTTAGCTTCTGTGGAAGTATGGGGAATTATGGGCTTTTCTTCAAATAATTATTTTAAGAGGCTTCCATTCCCCCTGATTTTTGTGGTGT CTCACAAGTACCCTCTAAGGTCTGGTCAGGACTGACCACCAAATCTCTACCACAGCCTGGACCTCCTTGTGAAATATACCTAACCTGCCC TAGAGTCAGTGTGTCAAGTCCTTACTGTAAATCCATGACTTTGAAATTTGTTGTTTTTTCCCTTTAAACTGCAGCCAGTGAATACAAATT TACTTGAAAATAGAGGGTATGGGGTTTTGCCTGTTTTGTAATCAGTTTGCTTGTTTTAGCACTCAGGGCTTTTTATTTGTTATTTAATTT TTTAATTGTTTTTAAGTCAGAAAGATCTCTGGGTTATCTCATGTGCTAAGGAAAAACTATTTTGCTTTTTCCAACTTTAATAGTTAGTAT TTCTAGGGGAGGCAATCAAGATAAGATATGCCATTAACTGTTAGCATTGTGAAATCTGTAAGACTCAATCTCTGATCTCAACCAAAGCTT TCTGAGTCCTGGAACTTTGCTTTGGGACAACTTTACTTTACCCATTTATATGCTGTACTTAACAGTTTGTAGCTAATTTATGGGGTCATA TCTTTTTTTTAGCTAATTTACGGGGGTCATATCAGTCATGAATAGCCTTTTTTAAAAATTTAATAATCCCTGAATACAAAAATGGAAATG GAAAATTTATAATCATAACCCCCCTAATTGGGAGTATTATAAGTTTGTAATGCTTTAAGCACTGCCTCTTAAGATGATAAATTTATAAGA TGAGAAATTCTATTTAAACTATTAAACTATTGTTAAATAAATGCCAATTCTATAAGTTATATTTTCTTGCAGATTAATCCCAATTGTTCC ACTAGTATTCTAGTTTTGATGAGACACAAATTTTTGTTGTTGTTTATTTTTGTTTTTTTGAGAGATGGAGTCTTGCTCTGTCACCCAGGC TGGAGTAGAGTGGCGTGATCTCAGCTTACTGCAACCTCCGCCTCCTGGGTTCAAGCGATTCTCCTGCCTCAGTGTCCCAAGTAGCTGGGA CTACAGGCGTGCACCACCATGCCTGGCCAAGACACAAATTTTTAATGGAAAAATATTCTGATTCCCAGTTCATGTAAGCTTTATGAAAAT TGAGTATATTGTTTATATGATGGTACAAATTATTCTTCCTCTAATAATAGCAGTACAGTATATTTTTTCCATAGCATCAGTGTAAACCAT AGCAAACTAAAGGAGCATTGCTATTAAAAAGATGAATTAGCTGGGCGCAGTGGCTCATACCTGTAATCCCAGCTACTCAGGAGGCTGAAG CAGGATAATTGCTTGAACCTAGGAGGCGGAGGTTGCAGTGAGCCAAGATCACACCATTGCATTCCAGCCTGGGCAACAAGAGTGAAACTC CATCTCTAAATAAATAAGTAAATAAATAGATGAATTTTTCTCCTAAGCAAATTGAAAAAGCTTCTTGTGTACTCAAAATTGAACAGAGCT ACCTTTTGACTAAAAATGTCATTTTTAATGAGCAGTATTTTCTGAACACAAAATTTTGTACAAGAGTGTCTCCATTGCATTAATTTAATT TTGTTATAATTTTTTCCCAATGAAAGGAAAAAAGTATTTTGTAGCTCCTCTTCCTTATGTAAATTCTTAACATATATTTTTGAGAAATTT GCATTTTTTAAAGTAAAATTGTTATCTTTGGATACTTACTTTTCTTTGTTTTCCTCATTTAAAGAGAATAGGGATATTTCTGTATTATAT ATTTACTGTTTCATCCCTCACCTTTGGAGTGACCATGACCTTGGCATGAAGGAGAGAAACCTCTGCTTTCCGCCTATTGCTTCCAGGAGT TACTACCTTACTGGCCTTGGAGATAATGCTCTTTTGTGCCAACCTGAGGATAATTTTAACAAAATGTAAGGCCAGTTTCAGAGGTTGTTT TGCCCCACAGAGAGACTAATCCCAATACAAGAATATTGACAACAAAAGGACAAAGTAGTTATTGCACAGGACGGAAAGGTGTCTTTATTT CATCCCCTCCCCACTTCCAAAGATGCAAAAGGCCTAATTGAATCAAGTCTCCTTTCCATCTGGCAGGAGACATTTTAATAAGGACTTTTT AATTTCCTACATTTCTTGGCCAAGTGTCATAGGAATGTGGCCTCTTTTGAAATTTAAAAATGAAGAAGAAAAAAAGAGCAACACTAAGTT AATATAATGGAGCAGATACTTTTAATGTTCTTACCATTGAATATGCCATTTAAGTTTGTTATACTTGAAATTATATGATTTTTGTCCAGC TCTCTAAATTGTCATCTCCAATAGATTTAGATGCTTCAAATAGTAACCACATTACTGTGATAGGTATTATTAGAAAAAAGTTATTTCTTG AGTTACACCTAAGAGGAAGAAGTAACATGATGGAAAGTGGTTGGAGATAGCACCCAATTAACATCGACAGCCAAGTCTTCTATTTCAGAA TATTGATTTATTTCGCTTTGGCTTTTGATGCCATCATGAGATTTAAGTCTGCAGTTTCAAAAGCTCATGCTACTTAGATGATTTTTGCAG CTTAAAAAATTGCTTGTGACTGCAGTATGTACACAGTTAAAAAGCTGTTCACTGCCCCTTTCAACCTTTTCATTTTGAGCTTTACTAAGA >In-frame_GTF2F2_ENST00000340473_chr13_45725966_+_GPALPP1_ENST00000379151_chr13_45578440_+_1647nt TTCCCAGTGTTCTGGCAGGTAAGGAACGCCGGCTCTTCGCCTCTCAGCGCGGCTTGTCCTTTGTTCCGGACGCCCGCTCCTCAGCCCTGC GGCTCCTGGGGTCGCTGCTGCATCCCGCACGCCTCCACCGGCTGCAGACCCATGGCCGAGCGCGGGGAACTCGACTTGACCGGCGCCAAA CAGAACACAGGAGTGTGGCTAGTCAAGGTTCCTAAATATTTGTCACAGCAATGGGCTAAAGCCTCTGGAAGAGGTGAAGTTGGGAAACTG CGGATTGCCAAGACTCAAGGAAGGACTGAGGTGTCATTTACTTTGAATGAGGATCTTGCAAATATTCATGATATTGGTGGAAAACCAGCT TCAGTCAGTGCTCCTAGAGAACATCCATTTGTCTTGCAAAGTGTTGGAGGACAGACATTAACAGTATTTACTGAGAGCTCATCAGTTGCA GGACCAGCTCTGCCCCCTAATTATAAAAGCAGTAGTTCAGATTCATCAGACAGCGATGAAGACAGTAGTTCTTTGTACGAAGAAGGAAAT CAAGAATCTGAAGAAGATGACAGTGGTCCAACTGCAAGAAAACAGAGGAAAAATCAGGATGATGACGATGATGATGATGATGGGTTTTTT GGACCAGCCCTTCCTCCTGGATTTAAAAAGCAGGATGATTCTCCTCCAAGGCCCATAATAGGTCCTGCATTGCCACCTGGTTTCATTAAA TCTACACAGAAAAGTGACAAGGGCAGAGATGATCCAGGACAACAGGAAACAGACAGCAGTGAAGATGAGGATATTATTGGACCAATGCCT GCAAAAGGACCAGTTAACTATAATGTAACGACAGAGTTTGAAAAAAGGGCCCAGAGAATGAAAGAAAAACTGACCAAAGGAGATGATGAT TCATCTAAACCCATTGTAAGAGAGTCATGGATGACTGAACTTCCTCCAGAAATGAAAGACTTTGGTCTTGGGCCAAGGACTTTTAAGAGA AGAGCTGATGACACATCTGGAGATCGATCAATCTGGACAGATACTCCAGCTGATAGGGAAAGGAAAGCTAAGGAAACACAAGAAGCAAGG AAGTCATCCAGTAAGAAAGATGAAGAACATATATTATCAGGAAGAGATAAGAGACTGGCTGAGCAGGTATCTTCATACAATGAATCAAAA AGATCAGAATCTCTTATGGACATACATCATAAAAAGTTAAAGAGTAAGGCTGCTGAAGACAAAAATAAGCCTCAAGAGAGAATACCATTT GACCGTGATAAAGATCTCAAGGTTAATCGGTTTGATGAAGCTCAGAAAAAAGCCCTAATAAAAAAATCTAGAGAACTAAACACCAGATTT TCACACGGCAAAGGCAATATGTTTTTATAAGTAAGTATATTTCAGTGAGGTATATTTTAATACTGATCAATGTGAACTTTTCTAAATACT CTATTGTCTTTAATAATTGTGCTGAAATCTATTTCCTTTTATAATAGATTAAAAATTTTATATTTTTATAAGTAAACAGTGATTTTTGAA AAGTCAGCCTTGTGGGATGAAAAATATGTCTTACTGGAAAAATCCCTCATAATAACCTAATAGGGCATTGCTATTAAAAATGCTAAAATA >In-frame_GTF2F2_ENST00000340473_chr13_45725966_+_GPALPP1_ENST00000361121_chr13_45578440_+_4347nt TTCCCAGTGTTCTGGCAGGTAAGGAACGCCGGCTCTTCGCCTCTCAGCGCGGCTTGTCCTTTGTTCCGGACGCCCGCTCCTCAGCCCTGC GGCTCCTGGGGTCGCTGCTGCATCCCGCACGCCTCCACCGGCTGCAGACCCATGGCCGAGCGCGGGGAACTCGACTTGACCGGCGCCAAA CAGAACACAGGAGTGTGGCTAGTCAAGGTTCCTAAATATTTGTCACAGCAATGGGCTAAAGCCTCTGGAAGAGGTGAAGTTGGGAAACTG CGGATTGCCAAGACTCAAGGAAGGACTGAGGTGTCATTTACTTTGAATGAGGATCTTGCAAATATTCATGATATTGGTGGAAAACCAGCT TCAGTCAGTGCTCCTAGAGAACATCCATTTGTCTTGCAAAGTGTTGGAGGACAGACATTAACAGTATTTACTGAGAGCTCATCAGTTGCA GGACCAGCTCTGCCCCCTAATTATAAAAGCAGTAGTTCAGATTCATCAGACAGCGATGAAGACAGTAGTTCTTTGTACGAAGAAGGAAAT CAAGAATCTGAAGAAGATGACAGTGGTCCAACTGCAAGAAAACAGAGGAAAAATCAGGATGATGACGATGATGATGATGATGGGTTTTTT GGACCAGCCCTTCCTCCTGGATTTAAAAAGCAGGATGATTCTCCTCCAAGGCCCATAATAGGTCCTGCATTGCCACCTGGTTTCATTAAA TCTACACAGAAAAGTGACAAGGGCAGAGATGATCCAGGACAACAGGAAACAGACAGCAGTGAAGATGAGGATATTATTGGACCAATGCCT GCAAAAGGACCAGTTAACTATAATGTAACGACAGAGTTTGAAAAAAGGGCCCAGAGAATGAAAGAAAAACTGACCAAAGGAGATGATGAT TCATCTAAACCCATTGTAAGAGAGTCATGGATGACTGAACTTCCTCCAGAAATGAAAGACTTTGGTCTTGGGCCAAGGACTTTTAAGAGA AGAGCTGATGACACATCTGGAGATCGATCAATCTGGACAGATACTCCAGCTGATAGGGAAAGGAAAGCTAAGGAAACACAAGAAGCAAGG AAGTCATCCAGTAAGAAAGATGAAGAACATATATTATCAGGAAGAGATAAGAGACTGGCTGAGCAGGTATCTTCATACAATGAATCAAAA AGATCAGAATCTCTTATGGACATACATCATAAAAAGTTAAAGAGTAAGGCTGCTGAAGACAAAAATAAGCCTCAAGAGAGAATACCATTT GACCGTGATAAAGATCTCAAGGTTAATCGGTTTGATGAAGCTCAGAAAAAAGCCCTAATAAAAAAATCTAGAGAACTAAACACCAGATTT TCACACGGCAAAGGCAATATGTTTTTATAAGGGGATTTCCCTGTGCAATGAAGAAAAGTTGAAGAATACTCTTTGTCCATCTTTATTTCT TTGTTTTTGGCTTCTTAAGATTAGAGATTACTTTAATCTTAAAAAACATACAAATTTACCTTGTTCTGTATGTCCTTTTAAGGTCATGTG GAAACATAAAACGAATGTTTTTTATGTAGAACAGAATATTCTATGTGCCTTTAGCTTCTGTGGAAGTATGGGGAATTATGGGCTTTTCTT CAAATAATTATTTTAAGAGGCTTCCATTCCCCCTGATTTTTGTGGTGTCTCACAAGTACCCTCTAAGGTCTGGTCAGGACTGACCACCAA ATCTCTACCACAGCCTGGACCTCCTTGTGAAATATACCTAACCTGCCCTAGAGTCAGTGTGTCAAGTCCTTACTGTAAATCCATGACTTT GAAATTTGTTGTTTTTTCCCTTTAAACTGCAGCCAGTGAATACAAATTTACTTGAAAATAGAGGGTATGGGGTTTTGCCTGTTTTGTAAT CAGTTTGCTTGTTTTAGCACTCAGGGCTTTTTATTTGTTATTTAATTTTTTAATTGTTTTTAAGTCAGAAAGATCTCTGGGTTATCTCAT GTGCTAAGGAAAAACTATTTTGCTTTTTCCAACTTTAATAGTTAGTATTTCTAGGGGAGGCAATCAAGATAAGATATGCCATTAACTGTT AGCATTGTGAAATCTGTAAGACTCAATCTCTGATCTCAACCAAAGCTTTCTGAGTCCTGGAACTTTGCTTTGGGACAACTTTACTTTACC CATTTATATGCTGTACTTAACAGTTTGTAGCTAATTTATGGGGTCATATCTTTTTTTTAGCTAATTTACGGGGGTCATATCAGTCATGAA TAGCCTTTTTTAAAAATTTAATAATCCCTGAATACAAAAATGGAAATGGAAAATTTATAATCATAACCCCCCTAATTGGGAGTATTATAA GTTTGTAATGCTTTAAGCACTGCCTCTTAAGATGATAAATTTATAAGATGAGAAATTCTATTTAAACTATTAAACTATTGTTAAATAAAT GCCAATTCTATAAGTTATATTTTCTTGCAGATTAATCCCAATTGTTCCACTAGTATTCTAGTTTTGATGAGACACAAATTTTTGTTGTTG TTTATTTTTGTTTTTTTGAGAGATGGAGTCTTGCTCTGTCACCCAGGCTGGAGTAGAGTGGCGTGATCTCAGCTTACTGCAACCTCCGCC TCCTGGGTTCAAGCGATTCTCCTGCCTCAGTGTCCCAAGTAGCTGGGACTACAGGCGTGCACCACCATGCCTGGCCAAGACACAAATTTT TAATGGAAAAATATTCTGATTCCCAGTTCATGTAAGCTTTATGAAAATTGAGTATATTGTTTATATGATGGTACAAATTATTCTTCCTCT AATAATAGCAGTACAGTATATTTTTTCCATAGCATCAGTGTAAACCATAGCAAACTAAAGGAGCATTGCTATTAAAAAGATGAATTAGCT GGGCGCAGTGGCTCATACCTGTAATCCCAGCTACTCAGGAGGCTGAAGCAGGATAATTGCTTGAACCTAGGAGGCGGAGGTTGCAGTGAG CCAAGATCACACCATTGCATTCCAGCCTGGGCAACAAGAGTGAAACTCCATCTCTAAATAAATAAGTAAATAAATAGATGAATTTTTCTC CTAAGCAAATTGAAAAAGCTTCTTGTGTACTCAAAATTGAACAGAGCTACCTTTTGACTAAAAATGTCATTTTTAATGAGCAGTATTTTC TGAACACAAAATTTTGTACAAGAGTGTCTCCATTGCATTAATTTAATTTTGTTATAATTTTTTCCCAATGAAAGGAAAAAAGTATTTTGT AGCTCCTCTTCCTTATGTAAATTCTTAACATATATTTTTGAGAAATTTGCATTTTTTAAAGTAAAATTGTTATCTTTGGATACTTACTTT TCTTTGTTTTCCTCATTTAAAGAGAATAGGGATATTTCTGTATTATATATTTACTGTTTCATCCCTCACCTTTGGAGTGACCATGACCTT GGCATGAAGGAGAGAAACCTCTGCTTTCCGCCTATTGCTTCCAGGAGTTACTACCTTACTGGCCTTGGAGATAATGCTCTTTTGTGCCAA CCTGAGGATAATTTTAACAAAATGTAAGGCCAGTTTCAGAGGTTGTTTTGCCCCACAGAGAGACTAATCCCAATACAAGAATATTGACAA CAAAAGGACAAAGTAGTTATTGCACAGGACGGAAAGGTGTCTTTATTTCATCCCCTCCCCACTTCCAAAGATGCAAAAGGCCTAATTGAA TCAAGTCTCCTTTCCATCTGGCAGGAGACATTTTAATAAGGACTTTTTAATTTCCTACATTTCTTGGCCAAGTGTCATAGGAATGTGGCC TCTTTTGAAATTTAAAAATGAAGAAGAAAAAAAGAGCAACACTAAGTTAATATAATGGAGCAGATACTTTTAATGTTCTTACCATTGAAT ATGCCATTTAAGTTTGTTATACTTGAAATTATATGATTTTTGTCCAGCTCTCTAAATTGTCATCTCCAATAGATTTAGATGCTTCAAATA GTAACCACATTACTGTGATAGGTATTATTAGAAAAAAGTTATTTCTTGAGTTACACCTAAGAGGAAGAAGTAACATGATGGAAAGTGGTT GGAGATAGCACCCAATTAACATCGACAGCCAAGTCTTCTATTTCAGAATATTGATTTATTTCGCTTTGGCTTTTGATGCCATCATGAGAT TTAAGTCTGCAGTTTCAAAAGCTCATGCTACTTAGATGATTTTTGCAGCTTAAAAAATTGCTTGTGACTGCAGTATGTACACAGTTAAAA AGCTGTTCACTGCCCCTTTCAACCTTTTCATTTTGAGCTTTACTAAGAGAATGCTTTTAGGAACAGAATTCCTAAAGTGTAATTTTTTAT |
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FusionGenePPI for GTF2F2_GPALPP1 |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
| Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
| Hgene | Hgene's interactors | Tgene | Tgene's interactors |
| GTF2F2 | GTF2B, HTATSF1, GTF2E1, TBP, AHR, ARNT, FOS, JUN, POLR2E, MSX2, ATF4, TCEA1, GTF2E2, AR, POLR2A, POLR2B, POLR2J, POLR2G, POLR2H, CTDP1, BAG6, MED29, SUPT5H, GPRC5A, POLR2C, GTF2F1, TAF10, TAF5, TAF4, HMGA1, LMNA, RPL27A, TCTEX1D2, HECW2, EFTUD2, SH3GL1, SHMT1, FAM177A1, UBR5, SRRT, SUPT4H1, NTRK1, KLF5, EWSR1, XPO1, POLR2F, CBLN4, TMEM184A | GPALPP1 | HECW2, PPID, ARL6IP4, SNIP1, CDKL5, HIST1H2BG, EWSR1, XPO1, CTBP2, THOC2, PPIL1, PIP4K2A, ZNF786, C11orf57, ZNF816, ZNF311, CLK2, FUOM, PNN |
| - Retained PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| - Lost PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
| - Retained PPIs, but lost function due to frame-shift fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for GTF2F2_GPALPP1 |
| Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
| Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for GTF2F2_GPALPP1 |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
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