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Fusion gene ID: 15434 |
FusionGeneSummary for GRIK4_TMPRSS4 |
Fusion gene summary |
Fusion gene information | Fusion gene name: GRIK4_TMPRSS4 | Fusion gene ID: 15434 | Hgene | Tgene | Gene symbol | GRIK4 | TMPRSS4 | Gene ID | 2900 | 56649 |
Gene name | glutamate ionotropic receptor kainate type subunit 4 | transmembrane serine protease 4 | |
Synonyms | EAA1|GRIK|GluK4|KA1 | CAPH2|MT-SP2|TMPRSS3 | |
Cytomap | 11q23.3 | 11q23.3 | |
Type of gene | protein-coding | protein-coding | |
Description | glutamate receptor ionotropic, kainate 4excitatory amino acid receptor 1glutamate receptor KA1glutamate receptor, ionotropic, kainate 4 | transmembrane protease serine 4channel-activating protease 2membrane-type serine protease 2transmembrane protease, serine 4transmembrane serine protease 3type II membrane serine protease | |
Modification date | 20180523 | 20180519 | |
UniProtAcc | Q16099 | Q9NRS4 | |
Ensembl transtripts involved in fusion gene | ENST00000527524, ENST00000438375, ENST00000527130, | ENST00000534111, ENST00000522307, ENST00000523251, ENST00000437212, ENST00000522824, ENST00000518413, | |
Fusion gene scores | * DoF score | 3 X 3 X 3=27 | 4 X 4 X 3=48 |
# samples | 3 | 4 | |
** MAII score | log2(3/27*10)=0.15200309344505 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | log2(4/48*10)=-0.263034405833794 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: GRIK4 [Title/Abstract] AND TMPRSS4 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | RV | BRCA | TCGA-EW-A1P1-01A | GRIK4 | chr11 | 120776202 | + | TMPRSS4 | chr11 | 117965537 | + |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000527524 | ENST00000534111 | GRIK4 | chr11 | 120776202 | + | TMPRSS4 | chr11 | 117965537 | + |
5CDS-5UTR | ENST00000527524 | ENST00000522307 | GRIK4 | chr11 | 120776202 | + | TMPRSS4 | chr11 | 117965537 | + |
5CDS-5UTR | ENST00000527524 | ENST00000523251 | GRIK4 | chr11 | 120776202 | + | TMPRSS4 | chr11 | 117965537 | + |
5CDS-5UTR | ENST00000527524 | ENST00000437212 | GRIK4 | chr11 | 120776202 | + | TMPRSS4 | chr11 | 117965537 | + |
5CDS-5UTR | ENST00000527524 | ENST00000522824 | GRIK4 | chr11 | 120776202 | + | TMPRSS4 | chr11 | 117965537 | + |
5CDS-intron | ENST00000527524 | ENST00000518413 | GRIK4 | chr11 | 120776202 | + | TMPRSS4 | chr11 | 117965537 | + |
In-frame | ENST00000438375 | ENST00000534111 | GRIK4 | chr11 | 120776202 | + | TMPRSS4 | chr11 | 117965537 | + |
5CDS-5UTR | ENST00000438375 | ENST00000522307 | GRIK4 | chr11 | 120776202 | + | TMPRSS4 | chr11 | 117965537 | + |
5CDS-5UTR | ENST00000438375 | ENST00000523251 | GRIK4 | chr11 | 120776202 | + | TMPRSS4 | chr11 | 117965537 | + |
5CDS-5UTR | ENST00000438375 | ENST00000437212 | GRIK4 | chr11 | 120776202 | + | TMPRSS4 | chr11 | 117965537 | + |
5CDS-5UTR | ENST00000438375 | ENST00000522824 | GRIK4 | chr11 | 120776202 | + | TMPRSS4 | chr11 | 117965537 | + |
5CDS-intron | ENST00000438375 | ENST00000518413 | GRIK4 | chr11 | 120776202 | + | TMPRSS4 | chr11 | 117965537 | + |
intron-3CDS | ENST00000527130 | ENST00000534111 | GRIK4 | chr11 | 120776202 | + | TMPRSS4 | chr11 | 117965537 | + |
intron-5UTR | ENST00000527130 | ENST00000522307 | GRIK4 | chr11 | 120776202 | + | TMPRSS4 | chr11 | 117965537 | + |
intron-5UTR | ENST00000527130 | ENST00000523251 | GRIK4 | chr11 | 120776202 | + | TMPRSS4 | chr11 | 117965537 | + |
intron-5UTR | ENST00000527130 | ENST00000437212 | GRIK4 | chr11 | 120776202 | + | TMPRSS4 | chr11 | 117965537 | + |
intron-5UTR | ENST00000527130 | ENST00000522824 | GRIK4 | chr11 | 120776202 | + | TMPRSS4 | chr11 | 117965537 | + |
intron-intron | ENST00000527130 | ENST00000518413 | GRIK4 | chr11 | 120776202 | + | TMPRSS4 | chr11 | 117965537 | + |
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FusionProtFeatures for GRIK4_TMPRSS4 |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
GRIK4 | TMPRSS4 |
Receptor for glutamate. L-glutamate acts as anexcitatory neurotransmitter at many synapses in the centralnervous system. The postsynaptic actions of Glu are mediated by avariety of receptors that are named according to their selectiveagonists. | Probable protease. Seems to be capable of activatingENaC (By similarity). {ECO:0000250}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | >TMPRSS4 | chr11:120776202 | chr11:117965537 | ENST00000437212 | + | 0 | 13 | 205_434 | -72 | 438 | Domain | Peptidase S1 |
Tgene | >TMPRSS4 | chr11:120776202 | chr11:117965537 | ENST00000437212 | + | 0 | 13 | 61_93 | -72 | 438 | Domain | Note=LDL-receptor class A |
Tgene | >TMPRSS4 | chr11:120776202 | chr11:117965537 | ENST00000437212 | + | 0 | 13 | 94_204 | -72 | 438 | Domain | SRCR |
Tgene | >TMPRSS4 | chr11:120776202 | chr11:117965537 | ENST00000522824 | + | 0 | 13 | 205_434 | -70 | 433 | Domain | Peptidase S1 |
Tgene | >TMPRSS4 | chr11:120776202 | chr11:117965537 | ENST00000522824 | + | 0 | 13 | 61_93 | -70 | 433 | Domain | Note=LDL-receptor class A |
Tgene | >TMPRSS4 | chr11:120776202 | chr11:117965537 | ENST00000522824 | + | 0 | 13 | 94_204 | -70 | 433 | Domain | SRCR |
Tgene | >TMPRSS4 | chr11:120776202 | chr11:117965537 | ENST00000534111 | + | 0 | 13 | 205_434 | 1 | 436 | Domain | Peptidase S1 |
Tgene | >TMPRSS4 | chr11:120776202 | chr11:117965537 | ENST00000534111 | + | 0 | 13 | 61_93 | 1 | 436 | Domain | Note=LDL-receptor class A |
Tgene | >TMPRSS4 | chr11:120776202 | chr11:117965537 | ENST00000534111 | + | 0 | 13 | 94_204 | 1 | 436 | Domain | SRCR |
Tgene | >TMPRSS4 | chr11:120776202 | chr11:117965537 | ENST00000437212 | + | 0 | 13 | 1_32 | -72 | 438 | Topological domain | Cytoplasmic |
Tgene | >TMPRSS4 | chr11:120776202 | chr11:117965537 | ENST00000437212 | + | 0 | 13 | 54_437 | -72 | 438 | Topological domain | Extracellular |
Tgene | >TMPRSS4 | chr11:120776202 | chr11:117965537 | ENST00000522824 | + | 0 | 13 | 1_32 | -70 | 433 | Topological domain | Cytoplasmic |
Tgene | >TMPRSS4 | chr11:120776202 | chr11:117965537 | ENST00000522824 | + | 0 | 13 | 54_437 | -70 | 433 | Topological domain | Extracellular |
Tgene | >TMPRSS4 | chr11:120776202 | chr11:117965537 | ENST00000534111 | + | 0 | 13 | 1_32 | 1 | 436 | Topological domain | Cytoplasmic |
Tgene | >TMPRSS4 | chr11:120776202 | chr11:117965537 | ENST00000534111 | + | 0 | 13 | 54_437 | 1 | 436 | Topological domain | Extracellular |
Tgene | >TMPRSS4 | chr11:120776202 | chr11:117965537 | ENST00000437212 | + | 0 | 13 | 33_53 | -72 | 438 | Transmembrane | Helical%3B Signal-anchor for type II membrane protein |
Tgene | >TMPRSS4 | chr11:120776202 | chr11:117965537 | ENST00000522824 | + | 0 | 13 | 33_53 | -70 | 433 | Transmembrane | Helical%3B Signal-anchor for type II membrane protein |
Tgene | >TMPRSS4 | chr11:120776202 | chr11:117965537 | ENST00000534111 | + | 0 | 13 | 33_53 | 1 | 436 | Transmembrane | Helical%3B Signal-anchor for type II membrane protein |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | >GRIK4 | chr11:120776202 | chr11:117965537 | ENST00000438375 | + | 12 | 20 | 862_865 | 492 | 957 | Compositional bias | Note=Poly-Arg |
Hgene | >GRIK4 | chr11:120776202 | chr11:117965537 | ENST00000527524 | + | 13 | 21 | 862_865 | 492 | 957 | Compositional bias | Note=Poly-Arg |
Hgene | >GRIK4 | chr11:120776202 | chr11:117965537 | ENST00000438375 | + | 12 | 20 | 21_545 | 492 | 957 | Topological domain | Extracellular |
Hgene | >GRIK4 | chr11:120776202 | chr11:117965537 | ENST00000438375 | + | 12 | 20 | 567_623 | 492 | 957 | Topological domain | Cytoplasmic |
Hgene | >GRIK4 | chr11:120776202 | chr11:117965537 | ENST00000438375 | + | 12 | 20 | 645_804 | 492 | 957 | Topological domain | Extracellular |
Hgene | >GRIK4 | chr11:120776202 | chr11:117965537 | ENST00000438375 | + | 12 | 20 | 826_956 | 492 | 957 | Topological domain | Cytoplasmic |
Hgene | >GRIK4 | chr11:120776202 | chr11:117965537 | ENST00000527524 | + | 13 | 21 | 21_545 | 492 | 957 | Topological domain | Extracellular |
Hgene | >GRIK4 | chr11:120776202 | chr11:117965537 | ENST00000527524 | + | 13 | 21 | 567_623 | 492 | 957 | Topological domain | Cytoplasmic |
Hgene | >GRIK4 | chr11:120776202 | chr11:117965537 | ENST00000527524 | + | 13 | 21 | 645_804 | 492 | 957 | Topological domain | Extracellular |
Hgene | >GRIK4 | chr11:120776202 | chr11:117965537 | ENST00000527524 | + | 13 | 21 | 826_956 | 492 | 957 | Topological domain | Cytoplasmic |
Hgene | >GRIK4 | chr11:120776202 | chr11:117965537 | ENST00000438375 | + | 12 | 20 | 546_566 | 492 | 957 | Transmembrane | Helical |
Hgene | >GRIK4 | chr11:120776202 | chr11:117965537 | ENST00000438375 | + | 12 | 20 | 624_644 | 492 | 957 | Transmembrane | Helical |
Hgene | >GRIK4 | chr11:120776202 | chr11:117965537 | ENST00000438375 | + | 12 | 20 | 805_825 | 492 | 957 | Transmembrane | Helical |
Hgene | >GRIK4 | chr11:120776202 | chr11:117965537 | ENST00000527524 | + | 13 | 21 | 546_566 | 492 | 957 | Transmembrane | Helical |
Hgene | >GRIK4 | chr11:120776202 | chr11:117965537 | ENST00000527524 | + | 13 | 21 | 624_644 | 492 | 957 | Transmembrane | Helical |
Hgene | >GRIK4 | chr11:120776202 | chr11:117965537 | ENST00000527524 | + | 13 | 21 | 805_825 | 492 | 957 | Transmembrane | Helical |
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FusionGeneSequence for GRIK4_TMPRSS4 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_GRIK4_ENST00000527524_chr11_120776202_+_TMPRSS4_ENST00000534111_chr11_117965537_+_927aa MPRVSAPLVLLPAWLVMVACSPHSLRIAAILDDPMECSRGERLSITLAKNRINRAPERLGKAKVEVDIFELLRDSEYETAETMCQILPKG VVAVLGPSSSPASSSIISNICGEKEVPHFKVAPEEFVKFQFQRFTTLNLHPSNTDISVAVAGILNFFNCTTACLICAKAECLLNLEKLLR QFLISKDTLSVRMLDDTRDPTPLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTNLEFSLQRMDSLVDDRVNILGFSI FNQSHAFFQEFAQSLNQSWQENCDHVPFTGPALSSALLFDAVYAVVTAVQELNRSQEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEGLT GHIEFNSKGQRSNYALKILQFTRNGFRQIGQWHVAEGLSMDSHLYASNISDTLFNTTLVVTTILENPYLMLKGNHQEMEGNDRYEGFCVD MLKELAEILRFNYKIRLVGDGVYGVPEANGTWTGMVGELIARDPDSDQPLNSLDVKPLRKPRIPMETFRKVGIPIIIALLSLASIIIVVV LIKVILDKYYFLCGQPLHFIPRKQLCDGELDCPLGEDEEHCVKSFPEGPAVAVRLSKDRSTLQVLDSATGNWFSACFDNFTEALAETACR QMGYSSKPTFRAVEIGPDQDLDVVEITENSQELRMRNSSGPCLSGSLVSLHCLACGKSLKTPRVVGVEEASVDSWPWQVSIQYDKQHVCG GSILDPHWVLTAAHCFRKHTDVFNWKVRAGSDKLGSFPSLAVAKIIIIEFNPMYPKDNDIALMKLQFPLTFSGTVRPICLPFFDEELTPA TPLWIIGWGFTKQNGGKMSDILLQASVQVIDSTRCNADDAYQGEVTEKMMCAGIPEGGVDTCQGDSGGPLMYQSDQWHVVGIVSWGYGCG >In-frame_GRIK4_ENST00000438375_chr11_120776202_+_TMPRSS4_ENST00000534111_chr11_117965537_+_927aa MPRVSAPLVLLPAWLVMVACSPHSLRIAAILDDPMECSRGERLSITLAKNRINRAPERLGKAKVEVDIFELLRDSEYETAETMCQILPKG VVAVLGPSSSPASSSIISNICGEKEVPHFKVAPEEFVKFQFQRFTTLNLHPSNTDISVAVAGILNFFNCTTACLICAKAECLLNLEKLLR QFLISKDTLSVRMLDDTRDPTPLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTNLEFSLQRMDSLVDDRVNILGFSI FNQSHAFFQEFAQSLNQSWQENCDHVPFTGPALSSALLFDAVYAVVTAVQELNRSQEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEGLT GHIEFNSKGQRSNYALKILQFTRNGFRQIGQWHVAEGLSMDSHLYASNISDTLFNTTLVVTTILENPYLMLKGNHQEMEGNDRYEGFCVD MLKELAEILRFNYKIRLVGDGVYGVPEANGTWTGMVGELIARDPDSDQPLNSLDVKPLRKPRIPMETFRKVGIPIIIALLSLASIIIVVV LIKVILDKYYFLCGQPLHFIPRKQLCDGELDCPLGEDEEHCVKSFPEGPAVAVRLSKDRSTLQVLDSATGNWFSACFDNFTEALAETACR QMGYSSKPTFRAVEIGPDQDLDVVEITENSQELRMRNSSGPCLSGSLVSLHCLACGKSLKTPRVVGVEEASVDSWPWQVSIQYDKQHVCG GSILDPHWVLTAAHCFRKHTDVFNWKVRAGSDKLGSFPSLAVAKIIIIEFNPMYPKDNDIALMKLQFPLTFSGTVRPICLPFFDEELTPA TPLWIIGWGFTKQNGGKMSDILLQASVQVIDSTRCNADDAYQGEVTEKMMCAGIPEGGVDTCQGDSGGPLMYQSDQWHVVGIVSWGYGCG |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_GRIK4_ENST00000527524_chr11_120776202_+_TMPRSS4_ENST00000534111_chr11_117965537_+_2781nt ATGCCCCGCGTCTCGGCGCCTTTGGTGCTGCTTCCTGCGTGGCTCGTGATGGTCGCCTGCAGCCCGCACTCCTTGAGGATCGCTGCTATC TTGGACGACCCCATGGAGTGCAGCAGAGGGGAGCGGCTCTCCATCACCCTGGCCAAGAACCGCATCAACCGCGCTCCTGAGAGGCTGGGC AAGGCCAAGGTCGAAGTGGACATCTTTGAGCTTCTCAGAGACAGCGAGTACGAGACTGCAGAAACCATGTGTCAGATCCTCCCCAAGGGG GTGGTCGCTGTCCTCGGACCATCGTCCAGCCCAGCCTCCAGCTCCATCATCAGCAACATCTGTGGAGAGAAGGAGGTCCCTCACTTCAAA GTGGCCCCAGAGGAGTTCGTCAAGTTCCAGTTCCAGAGATTCACAACCCTGAACCTCCACCCCAGCAACACTGACATCAGCGTGGCTGTA GCTGGGATCCTGAACTTCTTCAACTGCACCACCGCCTGCCTCATCTGTGCCAAAGCAGAATGCCTTTTAAACCTAGAGAAGCTGCTCCGG CAATTCCTTATCTCCAAGGACACGCTGTCCGTCCGCATGCTGGATGACACCCGGGACCCCACCCCGCTCCTCAAGGAGATCCGGGACGAC AAGACCGCCACCATCATCATCCACGCCAACGCCTCCATGTCCCACACCATCCTCCTGAAGGCAGCCGAACTTGGGATGGTGTCAGCCTAT TACACATACATCTTCACTAATCTGGAGTTCTCACTCCAGAGAATGGACAGCCTTGTGGATGATCGTGTCAACATCCTGGGATTTTCCATT TTCAACCAATCCCATGCTTTCTTCCAAGAGTTTGCCCAGAGCCTCAACCAGTCCTGGCAGGAGAACTGTGACCATGTGCCCTTCACTGGG CCTGCGCTCTCCTCGGCCCTGCTGTTTGATGCTGTCTATGCTGTGGTGACTGCGGTGCAGGAACTGAACCGGAGCCAAGAGATCGGCGTG AAGCCCTTGTCCTGCGGCTCGGCCCAGATCTGGCAGCACGGCACCAGCCTCATGAACTACCTGCGCATGGTAGAATTGGAAGGTCTTACC GGCCACATTGAATTCAACAGCAAAGGCCAGAGGTCCAACTACGCTTTGAAAATCTTACAGTTCACAAGGAATGGTTTTCGGCAGATCGGC CAGTGGCACGTGGCAGAGGGCCTCAGCATGGACAGCCACCTCTATGCCTCCAACATCTCGGACACTCTCTTCAACACCACCCTGGTCGTC ACCACCATCCTGGAGAACCCATATTTAATGCTGAAGGGGAACCACCAGGAGATGGAAGGCAATGACCGCTACGAGGGCTTCTGTGTGGAC ATGCTCAAGGAGCTGGCAGAGATCCTCCGATTCAACTACAAGATCCGCCTGGTTGGGGATGGCGTGTACGGCGTTCCCGAGGCCAACGGC ACCTGGACGGGAATGGTCGGGGAGCTGATCGCTAGGGATCCTGACAGTGATCAACCTCTGAACAGCCTCGATGTCAAACCCCTGCGCAAA CCCCGTATCCCCATGGAGACCTTCAGAAAGGTGGGGATCCCCATCATCATAGCACTACTGAGCCTGGCGAGTATCATCATTGTGGTTGTC CTCATCAAGGTGATTCTGGATAAATACTACTTCCTCTGCGGGCAGCCTCTCCACTTCATCCCGAGGAAGCAGCTGTGTGACGGAGAGCTG GACTGTCCCTTGGGGGAGGACGAGGAGCACTGTGTCAAGAGCTTCCCCGAAGGGCCTGCAGTGGCAGTCCGCCTCTCCAAGGACCGATCC ACACTGCAGGTGCTGGACTCGGCCACAGGGAACTGGTTCTCTGCCTGTTTCGACAACTTCACAGAAGCTCTCGCTGAGACAGCCTGTAGG CAGATGGGCTACAGCAGCAAACCCACTTTCAGAGCTGTGGAGATTGGCCCAGACCAGGATCTGGATGTTGTTGAAATCACAGAAAACAGC CAGGAGCTTCGCATGCGGAACTCAAGTGGGCCCTGTCTCTCAGGCTCCCTGGTCTCCCTGCACTGTCTTGCCTGTGGGAAGAGCCTGAAG ACCCCCCGTGTGGTGGGTGTGGAGGAGGCCTCTGTGGATTCTTGGCCTTGGCAGGTCAGCATCCAGTACGACAAACAGCACGTCTGTGGA GGGAGCATCCTGGACCCCCACTGGGTCCTCACGGCAGCCCACTGCTTCAGGAAACATACCGATGTGTTCAACTGGAAGGTGCGGGCAGGC TCAGACAAACTGGGCAGCTTCCCATCCCTGGCTGTGGCCAAGATCATCATCATTGAATTCAACCCCATGTACCCCAAAGACAATGACATC GCCCTCATGAAGCTGCAGTTCCCACTCACTTTCTCAGGCACAGTCAGGCCCATCTGTCTGCCCTTCTTTGATGAGGAGCTCACTCCAGCC ACCCCACTCTGGATCATTGGATGGGGCTTTACGAAGCAGAATGGAGGGAAGATGTCTGACATACTGCTGCAGGCGTCAGTCCAGGTCATT GACAGCACACGGTGCAATGCAGACGATGCGTACCAGGGGGAAGTCACCGAGAAGATGATGTGTGCAGGCATCCCGGAAGGGGGTGTGGAC ACCTGCCAGGGTGACAGTGGTGGGCCCCTGATGTACCAATCTGACCAGTGGCATGTGGTGGGCATCGTTAGTTGGGGCTATGGCTGCGGG >In-frame_GRIK4_ENST00000438375_chr11_120776202_+_TMPRSS4_ENST00000534111_chr11_117965537_+_2781nt ATGCCCCGCGTCTCGGCGCCTTTGGTGCTGCTTCCTGCGTGGCTCGTGATGGTCGCCTGCAGCCCGCACTCCTTGAGGATCGCTGCTATC TTGGACGACCCCATGGAGTGCAGCAGAGGGGAGCGGCTCTCCATCACCCTGGCCAAGAACCGCATCAACCGCGCTCCTGAGAGGCTGGGC AAGGCCAAGGTCGAAGTGGACATCTTTGAGCTTCTCAGAGACAGCGAGTACGAGACTGCAGAAACCATGTGTCAGATCCTCCCCAAGGGG GTGGTCGCTGTCCTCGGACCATCGTCCAGCCCAGCCTCCAGCTCCATCATCAGCAACATCTGTGGAGAGAAGGAGGTCCCTCACTTCAAA GTGGCCCCAGAGGAGTTCGTCAAGTTCCAGTTCCAGAGATTCACAACCCTGAACCTCCACCCCAGCAACACTGACATCAGCGTGGCTGTA GCTGGGATCCTGAACTTCTTCAACTGCACCACCGCCTGCCTCATCTGTGCCAAAGCAGAATGCCTTTTAAACCTAGAGAAGCTGCTCCGG CAATTCCTTATCTCCAAGGACACGCTGTCCGTCCGCATGCTGGATGACACCCGGGACCCCACCCCGCTCCTCAAGGAGATCCGGGACGAC AAGACCGCCACCATCATCATCCACGCCAACGCCTCCATGTCCCACACCATCCTCCTGAAGGCAGCCGAACTTGGGATGGTGTCAGCCTAT TACACATACATCTTCACTAATCTGGAGTTCTCACTCCAGAGAATGGACAGCCTTGTGGATGATCGTGTCAACATCCTGGGATTTTCCATT TTCAACCAATCCCATGCTTTCTTCCAAGAGTTTGCCCAGAGCCTCAACCAGTCCTGGCAGGAGAACTGTGACCATGTGCCCTTCACTGGG CCTGCGCTCTCCTCGGCCCTGCTGTTTGATGCTGTCTATGCTGTGGTGACTGCGGTGCAGGAACTGAACCGGAGCCAAGAGATCGGCGTG AAGCCCTTGTCCTGCGGCTCGGCCCAGATCTGGCAGCACGGCACCAGCCTCATGAACTACCTGCGCATGGTAGAATTGGAAGGTCTTACC GGCCACATTGAATTCAACAGCAAAGGCCAGAGGTCCAACTACGCTTTGAAAATCTTACAGTTCACAAGGAATGGTTTTCGGCAGATCGGC CAGTGGCACGTGGCAGAGGGCCTCAGCATGGACAGCCACCTCTATGCCTCCAACATCTCGGACACTCTCTTCAACACCACCCTGGTCGTC ACCACCATCCTGGAGAACCCATATTTAATGCTGAAGGGGAACCACCAGGAGATGGAAGGCAATGACCGCTACGAGGGCTTCTGTGTGGAC ATGCTCAAGGAGCTGGCAGAGATCCTCCGATTCAACTACAAGATCCGCCTGGTTGGGGATGGCGTGTACGGCGTTCCCGAGGCCAACGGC ACCTGGACGGGAATGGTCGGGGAGCTGATCGCTAGGGATCCTGACAGTGATCAACCTCTGAACAGCCTCGATGTCAAACCCCTGCGCAAA CCCCGTATCCCCATGGAGACCTTCAGAAAGGTGGGGATCCCCATCATCATAGCACTACTGAGCCTGGCGAGTATCATCATTGTGGTTGTC CTCATCAAGGTGATTCTGGATAAATACTACTTCCTCTGCGGGCAGCCTCTCCACTTCATCCCGAGGAAGCAGCTGTGTGACGGAGAGCTG GACTGTCCCTTGGGGGAGGACGAGGAGCACTGTGTCAAGAGCTTCCCCGAAGGGCCTGCAGTGGCAGTCCGCCTCTCCAAGGACCGATCC ACACTGCAGGTGCTGGACTCGGCCACAGGGAACTGGTTCTCTGCCTGTTTCGACAACTTCACAGAAGCTCTCGCTGAGACAGCCTGTAGG CAGATGGGCTACAGCAGCAAACCCACTTTCAGAGCTGTGGAGATTGGCCCAGACCAGGATCTGGATGTTGTTGAAATCACAGAAAACAGC CAGGAGCTTCGCATGCGGAACTCAAGTGGGCCCTGTCTCTCAGGCTCCCTGGTCTCCCTGCACTGTCTTGCCTGTGGGAAGAGCCTGAAG ACCCCCCGTGTGGTGGGTGTGGAGGAGGCCTCTGTGGATTCTTGGCCTTGGCAGGTCAGCATCCAGTACGACAAACAGCACGTCTGTGGA GGGAGCATCCTGGACCCCCACTGGGTCCTCACGGCAGCCCACTGCTTCAGGAAACATACCGATGTGTTCAACTGGAAGGTGCGGGCAGGC TCAGACAAACTGGGCAGCTTCCCATCCCTGGCTGTGGCCAAGATCATCATCATTGAATTCAACCCCATGTACCCCAAAGACAATGACATC GCCCTCATGAAGCTGCAGTTCCCACTCACTTTCTCAGGCACAGTCAGGCCCATCTGTCTGCCCTTCTTTGATGAGGAGCTCACTCCAGCC ACCCCACTCTGGATCATTGGATGGGGCTTTACGAAGCAGAATGGAGGGAAGATGTCTGACATACTGCTGCAGGCGTCAGTCCAGGTCATT GACAGCACACGGTGCAATGCAGACGATGCGTACCAGGGGGAAGTCACCGAGAAGATGATGTGTGCAGGCATCCCGGAAGGGGGTGTGGAC ACCTGCCAGGGTGACAGTGGTGGGCCCCTGATGTACCAATCTGACCAGTGGCATGTGGTGGGCATCGTTAGTTGGGGCTATGGCTGCGGG |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_GRIK4_ENST00000527524_chr11_120776202_+_TMPRSS4_ENST00000534111_chr11_117965537_+_7045nt AGCTGCGGGCGGATCGGGCTGGAGCCGCCACGGCTGCTGCGGAAGAGGAAAAACGGCCAACAGCAGCCCCGCGGCCGGCCCGGCAGCGCC CGGCCCCCGGCTCAGCCCCCGGAGTGCGGAGCCGACCAGCAGATACTTTCTGAGTGCCTACTATGTGCCAGCCTGTGCTAGGCACTGAGG ACACAGGTGGAAAAGCCCGAATTGCTCCCTGCTCTCCTGGCGCTCATCACCCCGGAGAGTTATGTCATGCCCAGGCCAGCAGGGGGCTCC ATGAGGATTCATAGAAGATGCCCCGCGTCTCGGCGCCTTTGGTGCTGCTTCCTGCGTGGCTCGTGATGGTCGCCTGCAGCCCGCACTCCT TGAGGATCGCTGCTATCTTGGACGACCCCATGGAGTGCAGCAGAGGGGAGCGGCTCTCCATCACCCTGGCCAAGAACCGCATCAACCGCG CTCCTGAGAGGCTGGGCAAGGCCAAGGTCGAAGTGGACATCTTTGAGCTTCTCAGAGACAGCGAGTACGAGACTGCAGAAACCATGTGTC AGATCCTCCCCAAGGGGGTGGTCGCTGTCCTCGGACCATCGTCCAGCCCAGCCTCCAGCTCCATCATCAGCAACATCTGTGGAGAGAAGG AGGTCCCTCACTTCAAAGTGGCCCCAGAGGAGTTCGTCAAGTTCCAGTTCCAGAGATTCACAACCCTGAACCTCCACCCCAGCAACACTG ACATCAGCGTGGCTGTAGCTGGGATCCTGAACTTCTTCAACTGCACCACCGCCTGCCTCATCTGTGCCAAAGCAGAATGCCTTTTAAACC TAGAGAAGCTGCTCCGGCAATTCCTTATCTCCAAGGACACGCTGTCCGTCCGCATGCTGGATGACACCCGGGACCCCACCCCGCTCCTCA AGGAGATCCGGGACGACAAGACCGCCACCATCATCATCCACGCCAACGCCTCCATGTCCCACACCATCCTCCTGAAGGCAGCCGAACTTG GGATGGTGTCAGCCTATTACACATACATCTTCACTAATCTGGAGTTCTCACTCCAGAGAATGGACAGCCTTGTGGATGATCGTGTCAACA TCCTGGGATTTTCCATTTTCAACCAATCCCATGCTTTCTTCCAAGAGTTTGCCCAGAGCCTCAACCAGTCCTGGCAGGAGAACTGTGACC ATGTGCCCTTCACTGGGCCTGCGCTCTCCTCGGCCCTGCTGTTTGATGCTGTCTATGCTGTGGTGACTGCGGTGCAGGAACTGAACCGGA GCCAAGAGATCGGCGTGAAGCCCTTGTCCTGCGGCTCGGCCCAGATCTGGCAGCACGGCACCAGCCTCATGAACTACCTGCGCATGGTAG AATTGGAAGGTCTTACCGGCCACATTGAATTCAACAGCAAAGGCCAGAGGTCCAACTACGCTTTGAAAATCTTACAGTTCACAAGGAATG GTTTTCGGCAGATCGGCCAGTGGCACGTGGCAGAGGGCCTCAGCATGGACAGCCACCTCTATGCCTCCAACATCTCGGACACTCTCTTCA ACACCACCCTGGTCGTCACCACCATCCTGGAGAACCCATATTTAATGCTGAAGGGGAACCACCAGGAGATGGAAGGCAATGACCGCTACG AGGGCTTCTGTGTGGACATGCTCAAGGAGCTGGCAGAGATCCTCCGATTCAACTACAAGATCCGCCTGGTTGGGGATGGCGTGTACGGCG TTCCCGAGGCCAACGGCACCTGGACGGGAATGGTCGGGGAGCTGATCGCTAGGGATCCTGACAGTGATCAACCTCTGAACAGCCTCGATG TCAAACCCCTGCGCAAACCCCGTATCCCCATGGAGACCTTCAGAAAGGTGGGGATCCCCATCATCATAGCACTACTGAGCCTGGCGAGTA TCATCATTGTGGTTGTCCTCATCAAGGTGATTCTGGATAAATACTACTTCCTCTGCGGGCAGCCTCTCCACTTCATCCCGAGGAAGCAGC TGTGTGACGGAGAGCTGGACTGTCCCTTGGGGGAGGACGAGGAGCACTGTGTCAAGAGCTTCCCCGAAGGGCCTGCAGTGGCAGTCCGCC TCTCCAAGGACCGATCCACACTGCAGGTGCTGGACTCGGCCACAGGGAACTGGTTCTCTGCCTGTTTCGACAACTTCACAGAAGCTCTCG CTGAGACAGCCTGTAGGCAGATGGGCTACAGCAGCAAACCCACTTTCAGAGCTGTGGAGATTGGCCCAGACCAGGATCTGGATGTTGTTG AAATCACAGAAAACAGCCAGGAGCTTCGCATGCGGAACTCAAGTGGGCCCTGTCTCTCAGGCTCCCTGGTCTCCCTGCACTGTCTTGCCT GTGGGAAGAGCCTGAAGACCCCCCGTGTGGTGGGTGTGGAGGAGGCCTCTGTGGATTCTTGGCCTTGGCAGGTCAGCATCCAGTACGACA AACAGCACGTCTGTGGAGGGAGCATCCTGGACCCCCACTGGGTCCTCACGGCAGCCCACTGCTTCAGGAAACATACCGATGTGTTCAACT GGAAGGTGCGGGCAGGCTCAGACAAACTGGGCAGCTTCCCATCCCTGGCTGTGGCCAAGATCATCATCATTGAATTCAACCCCATGTACC CCAAAGACAATGACATCGCCCTCATGAAGCTGCAGTTCCCACTCACTTTCTCAGGCACAGTCAGGCCCATCTGTCTGCCCTTCTTTGATG AGGAGCTCACTCCAGCCACCCCACTCTGGATCATTGGATGGGGCTTTACGAAGCAGAATGGAGGGAAGATGTCTGACATACTGCTGCAGG CGTCAGTCCAGGTCATTGACAGCACACGGTGCAATGCAGACGATGCGTACCAGGGGGAAGTCACCGAGAAGATGATGTGTGCAGGCATCC CGGAAGGGGGTGTGGACACCTGCCAGGGTGACAGTGGTGGGCCCCTGATGTACCAATCTGACCAGTGGCATGTGGTGGGCATCGTTAGTT GGGGCTATGGCTGCGGGGGCCCGAGCACCCCAGGAGTATACACCAAGGTCTCAGCCTATCTCAACTGGATCTACAATGTCTGGAAGGCTG AGCTGTAATGCTGCTGCCCCTTTGCAGTGCTGGGAGCCGCTTCCTTCCTGCCCTGCCCACCTGGGGATCCCCCAAAGTCAGACACAGAGC AAGAGTCCCCTTGGGTACACCCCTCTGCCCACAGCCTCAGCATTTCTTGGAGCAGCAAAGGGCCTCAATTCCTATAAGAGACCCTCGCAG CCCAGAGGCGCCCAGAGGAAGTCAGCAGCCCTAGCTCGGCCACACTTGGTGCTCCCAGCATCCCAGGGAGAGACACAGCCCACTGAACAA GGTCTCAGGGGTATTGCTAAGCCAAGAAGGAACTTTCCCACACTACTGAATGGAAGCAGGCTGTCTTGTAAAAGCCCAGATCACTGTGGG CTGGAGAGGAGAAGGAAAGGGTCTGCGCCAGCCCTGTCCGTCTTCACCCATCCCCAAGCCTACTAGAGCAAGAAACCAGTTGTAATATAA AATGCACTGCCCTACTGTTGGTATGACTACCGTTACCTACTGTTGTCATTGTTATTACAGCTATGGCCACTATTATTAAAGAGCTGTGTA ACATCTCTGGCATAGGCTAGCTGGAATGCTTGATAAGAACTGAGCTGGGATGATTGAACTTTCATTCTTTGGCTTGGGGAGAAAAGAAGT CCTGGGGAAGCAATTGAGTCTCAAAGTAGAGGCAGGGGAAAAAAGAGTTAGGGAGACCAGATCTGCTGAGTGGCAGCAAGAGTGAGCTGC AGATTACAGAAACCAGGGTGAGCAAGTTTGAGTCCCACACAGGGCCTTCTCCCTTTGCCTCTTTCCCTCCCTCCCTGCCTGTGATAATCA GCCAGGAGCCAGGGATAACCTATGACTTGGGAAAGAGATGAGTTAGGCAGTCAAGGGTGACATTCAATCAGGGATCCACAAGTGGCTGGA AAGAAATGCTGGTCCTGTGTCCTAACTTTTTCCGCCTGGAGAGCCCTCAGTGTGGCTTCTTACATTTAAAAAACAAAAAGGATCAGCTGC CAGGTGTGAGGCAGTCCCCAAGCTGAGTTGTGAGGATGTAAGCATGAATAAGTCCCTGCACTCAAAATGGTCAAAGAATTAAACCCCATG GACTTTTTTGGCATCTGTATGAAAGCTTGGGTTTTCTGAGGACTGTCTTGCTATAGTTAAGTCAGATCCTAGATGAAATATACTTGTTCA TACTGTACTAGGTTCTTAGGAAACAACAGAATTCCTCAAATGCCAAAAACAAAGAAAATAGAAACCCAGAAAACAAAACAAAATAAAACA AAACCATCAGAACTGTGAGTGGAAACTAAGGTGATGATCTGGGAGCAATACACTAAAATCTTGGGTCGAGACCTATATGAAGGCTGGCAG TGGAGCTAAACCTGGACACACTGAAGACAAGGGAGCTGAACCAGGGCTCCTACATGAAGCAGGGATAACTGATGGCAGTAAATGTGGTCT CAAATTGCAGATGGTCTGGAGGAAAATTTCCCAAATTTAGAGCCTCAGGATTCCCAAAGATCCTCCAAATATGAGCTCACAATCAAAGAT CAGAGACGTTGAAAAATAAAAAACACCTTAAGTGGGCAGCATAAAAAACAGCTAATTTAGAACCCCAAAGGCTTCAGATGTCAGAATATT AGAGACTTATGATAATAAGCAATATTTGCAGAGTATTTGTATGTGCCAGACACTATTGTAAGTGCTTCATCATGTACTGATTCATTTAAT ACTCACAGAAATCTGTGAGATGGGTATTATTCTTATCCTCACTCTATGGATTAAAAAAACTAAGGCACAAAGTGGTTAAGCTCCTTGCCT GAGATTATAGACTGTAAGTTGAACGTGAGCACTTGGAATACAGAGTTCATGCTGTAAACTACCACACTATAGGGCCTCCAATATGATAAT TTATAAAATATTTGAATAAAAAATGAATACTAGTTCCACATTTTAAAATCATGTTTAACTGTGGTCAAATGCACATAACACAAGTTGCCA TCTTCACCATTTTTAGGTGTATAGTTCAGTGGTGTTATGTACATTCACACTATTGTGCAGTCATCACCACCATCCATCTCCAGAACAGAA ACTCAGTACCCATCAAACAACTCTCCATTTCCCCCTCCTCCCAATCTCTGGCAACCACCATTGTGCTTTCAGTCTCTGTGAACTGGATTA CTCTGGGTACCTCATTTAAGTGAAGTCATGCAGTATTGGTCTTTTTGTACTTGTTTTATTTCACTTCACATTGTGTCTTCAAGTTTCACC CATGTTGTAGCATGTGTCAGAATTTCTTCCCTTTTTAGACTAAATAATATTCTATTGTTTATACGAACATTCAGGTTACTTCTATCTTTT GGCTATTGTGAATTATGCTGCTGTGAACATGGGTGTACAAGTATCTCTTTGAGGCCCTGCTTTCAATTCTCTTGGGTATATTCCCAGAAG TGGAATTGCTGGATCATATGGTAATTCTATTTTGAATTTTTTGAGGAACTGATATATTGCTTTCCATAGAGACTGCACCATTTTACATTC CCATCAACAGTTTGCAGGAGTTACTATTTCTCCATATCCCCCCTAACACTTGCTATTTTCTGTTAAAAATGGATATCTTAATAATCAAGC AAAAATAACAGGCAGATTTGAAAAAGAACTGAATACAGCTTTTAGAAATAAAAACTATAATTATAAAAATAAAAAACTAAGTGGATGGGG TAAATAACAATTAAAACACCAATTAAGAGAGAACAAATGAACTGGAAGATAAATTGAAGAAGTGACTAGGCTTAACAGCAGAGAGAGATA AGGAGATTAAAAATATGAAAACAAGGCCAGGAGCAATGAAGCCTAGAATGGTAAATTCTAACATATCCAGAATCCCAGAAAGAGAGAATC AAGACAATGAGAGAGAGACAGTACCAAAGAGATAAGAGCTGAGAATGTTCCAGAATTGATAAAAGGTGTGAATCCACAGAACATACACCA CCATAGTGTACACGCATACAACCAAGGTGGAAAAATTAGAATAAATCCACACCTATGTACATTATAATGAAACTGCAGAACACCAAAGAC AAAAAGAAACTCCTTATAGCAGCAGAGAGAAAACCCAGACCACCCACAGTACCACAAATCTACCACAATTAGACTGACAACAGGCTTTCC CACAGCAATAAAGGAGCTAGAAGTCAGTGGAAGTATATCTCCAGCATGCCAAAAGATAACAATCAATCAGGGATTGTGAACCCTACAAAA CTATCTTTCAAGAATAAAGGCATTTTCAAGAAAACAAAAACAGACTTTACCATCAACAAACCTTCTCTAAAAGAATATATAAAGCATTTA CTTTAGGAAGAAGGAAAATGATCCTAAAAGGAAGAACCAAGAAGCAAGTAGCAATAGTGAGGCAATTGTGAAAATGTAGGTAAGTCTAAA CACACTCTGTCTACTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTATTTTGAGACTGAGTCTTGCCCTGTCACCCAGACTGGAGTGCAG TGGCAGGATCTTGGCTCACTGCTATCTCCACCTCCCAGGTTCAAGTGATTCTTCTGCCTCAGCCTCCCGAGTAGCTGGGATTACATGCAC ATGCCACCATATCCGGCTAATTTTTGAATTTTTAGTAGAGATGGGGTTTCACTGTGTTGGCCAGGCCGGTCTCAAACTCCCGACCTCAAG TGATCCCCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGTCTACATATTATTAAAATAACAATAATATTTATTTTGTGGGTTA ATTTTTTTTGAAACAGATATTGAATTTATTGGTTGGCTATGAGTAGAAAAATACATCAGTAAAGAAAAAAGACCCTGTATATAAATATAA TACTAGCTAGTTAAAATTTGACCAAGAAGTTTCCATTGTGGGTTAATTTTTAAAGGCCTAACTGAAATATGGAGTAACCACAGCATGCAG >In-frame_GRIK4_ENST00000438375_chr11_120776202_+_TMPRSS4_ENST00000534111_chr11_117965537_+_7100nt CCTTTCCCGATTCCCCGACGTTTCGGGAGGAGTGGGGTCGGAGCGCAGGGCTGGGAAGGGTCTTAGGACCCAGGAAGGAGACGGGTGCCT CCCAGAGAGGACCCCATCCCCTCCGAGGTCCGGGCGGCTCCCGGCCTCTCCCTGGGGTGCCGTAGCCCCCCTCGACCCGCCTTCCCGCAG CCGCAGTCGTTCGGGCCTGGAGGTGGCCGGGCATCGGTGCCGACGCCGCGAGGGCAGCGCCCGCGGCGGGAATACTAATGCACCCTAAAG GGCACGGCCGCCGCCGCAGCAGAGTTATGTCATGCCCAGGCCAGCAGGGGGCTCCATGAGGATTCATAGAAGATGCCCCGCGTCTCGGCG CCTTTGGTGCTGCTTCCTGCGTGGCTCGTGATGGTCGCCTGCAGCCCGCACTCCTTGAGGATCGCTGCTATCTTGGACGACCCCATGGAG TGCAGCAGAGGGGAGCGGCTCTCCATCACCCTGGCCAAGAACCGCATCAACCGCGCTCCTGAGAGGCTGGGCAAGGCCAAGGTCGAAGTG GACATCTTTGAGCTTCTCAGAGACAGCGAGTACGAGACTGCAGAAACCATGTGTCAGATCCTCCCCAAGGGGGTGGTCGCTGTCCTCGGA CCATCGTCCAGCCCAGCCTCCAGCTCCATCATCAGCAACATCTGTGGAGAGAAGGAGGTCCCTCACTTCAAAGTGGCCCCAGAGGAGTTC GTCAAGTTCCAGTTCCAGAGATTCACAACCCTGAACCTCCACCCCAGCAACACTGACATCAGCGTGGCTGTAGCTGGGATCCTGAACTTC TTCAACTGCACCACCGCCTGCCTCATCTGTGCCAAAGCAGAATGCCTTTTAAACCTAGAGAAGCTGCTCCGGCAATTCCTTATCTCCAAG GACACGCTGTCCGTCCGCATGCTGGATGACACCCGGGACCCCACCCCGCTCCTCAAGGAGATCCGGGACGACAAGACCGCCACCATCATC ATCCACGCCAACGCCTCCATGTCCCACACCATCCTCCTGAAGGCAGCCGAACTTGGGATGGTGTCAGCCTATTACACATACATCTTCACT AATCTGGAGTTCTCACTCCAGAGAATGGACAGCCTTGTGGATGATCGTGTCAACATCCTGGGATTTTCCATTTTCAACCAATCCCATGCT TTCTTCCAAGAGTTTGCCCAGAGCCTCAACCAGTCCTGGCAGGAGAACTGTGACCATGTGCCCTTCACTGGGCCTGCGCTCTCCTCGGCC CTGCTGTTTGATGCTGTCTATGCTGTGGTGACTGCGGTGCAGGAACTGAACCGGAGCCAAGAGATCGGCGTGAAGCCCTTGTCCTGCGGC TCGGCCCAGATCTGGCAGCACGGCACCAGCCTCATGAACTACCTGCGCATGGTAGAATTGGAAGGTCTTACCGGCCACATTGAATTCAAC AGCAAAGGCCAGAGGTCCAACTACGCTTTGAAAATCTTACAGTTCACAAGGAATGGTTTTCGGCAGATCGGCCAGTGGCACGTGGCAGAG GGCCTCAGCATGGACAGCCACCTCTATGCCTCCAACATCTCGGACACTCTCTTCAACACCACCCTGGTCGTCACCACCATCCTGGAGAAC CCATATTTAATGCTGAAGGGGAACCACCAGGAGATGGAAGGCAATGACCGCTACGAGGGCTTCTGTGTGGACATGCTCAAGGAGCTGGCA GAGATCCTCCGATTCAACTACAAGATCCGCCTGGTTGGGGATGGCGTGTACGGCGTTCCCGAGGCCAACGGCACCTGGACGGGAATGGTC GGGGAGCTGATCGCTAGGGATCCTGACAGTGATCAACCTCTGAACAGCCTCGATGTCAAACCCCTGCGCAAACCCCGTATCCCCATGGAG ACCTTCAGAAAGGTGGGGATCCCCATCATCATAGCACTACTGAGCCTGGCGAGTATCATCATTGTGGTTGTCCTCATCAAGGTGATTCTG GATAAATACTACTTCCTCTGCGGGCAGCCTCTCCACTTCATCCCGAGGAAGCAGCTGTGTGACGGAGAGCTGGACTGTCCCTTGGGGGAG GACGAGGAGCACTGTGTCAAGAGCTTCCCCGAAGGGCCTGCAGTGGCAGTCCGCCTCTCCAAGGACCGATCCACACTGCAGGTGCTGGAC TCGGCCACAGGGAACTGGTTCTCTGCCTGTTTCGACAACTTCACAGAAGCTCTCGCTGAGACAGCCTGTAGGCAGATGGGCTACAGCAGC AAACCCACTTTCAGAGCTGTGGAGATTGGCCCAGACCAGGATCTGGATGTTGTTGAAATCACAGAAAACAGCCAGGAGCTTCGCATGCGG AACTCAAGTGGGCCCTGTCTCTCAGGCTCCCTGGTCTCCCTGCACTGTCTTGCCTGTGGGAAGAGCCTGAAGACCCCCCGTGTGGTGGGT GTGGAGGAGGCCTCTGTGGATTCTTGGCCTTGGCAGGTCAGCATCCAGTACGACAAACAGCACGTCTGTGGAGGGAGCATCCTGGACCCC CACTGGGTCCTCACGGCAGCCCACTGCTTCAGGAAACATACCGATGTGTTCAACTGGAAGGTGCGGGCAGGCTCAGACAAACTGGGCAGC TTCCCATCCCTGGCTGTGGCCAAGATCATCATCATTGAATTCAACCCCATGTACCCCAAAGACAATGACATCGCCCTCATGAAGCTGCAG TTCCCACTCACTTTCTCAGGCACAGTCAGGCCCATCTGTCTGCCCTTCTTTGATGAGGAGCTCACTCCAGCCACCCCACTCTGGATCATT GGATGGGGCTTTACGAAGCAGAATGGAGGGAAGATGTCTGACATACTGCTGCAGGCGTCAGTCCAGGTCATTGACAGCACACGGTGCAAT GCAGACGATGCGTACCAGGGGGAAGTCACCGAGAAGATGATGTGTGCAGGCATCCCGGAAGGGGGTGTGGACACCTGCCAGGGTGACAGT GGTGGGCCCCTGATGTACCAATCTGACCAGTGGCATGTGGTGGGCATCGTTAGTTGGGGCTATGGCTGCGGGGGCCCGAGCACCCCAGGA GTATACACCAAGGTCTCAGCCTATCTCAACTGGATCTACAATGTCTGGAAGGCTGAGCTGTAATGCTGCTGCCCCTTTGCAGTGCTGGGA GCCGCTTCCTTCCTGCCCTGCCCACCTGGGGATCCCCCAAAGTCAGACACAGAGCAAGAGTCCCCTTGGGTACACCCCTCTGCCCACAGC CTCAGCATTTCTTGGAGCAGCAAAGGGCCTCAATTCCTATAAGAGACCCTCGCAGCCCAGAGGCGCCCAGAGGAAGTCAGCAGCCCTAGC TCGGCCACACTTGGTGCTCCCAGCATCCCAGGGAGAGACACAGCCCACTGAACAAGGTCTCAGGGGTATTGCTAAGCCAAGAAGGAACTT TCCCACACTACTGAATGGAAGCAGGCTGTCTTGTAAAAGCCCAGATCACTGTGGGCTGGAGAGGAGAAGGAAAGGGTCTGCGCCAGCCCT GTCCGTCTTCACCCATCCCCAAGCCTACTAGAGCAAGAAACCAGTTGTAATATAAAATGCACTGCCCTACTGTTGGTATGACTACCGTTA CCTACTGTTGTCATTGTTATTACAGCTATGGCCACTATTATTAAAGAGCTGTGTAACATCTCTGGCATAGGCTAGCTGGAATGCTTGATA AGAACTGAGCTGGGATGATTGAACTTTCATTCTTTGGCTTGGGGAGAAAAGAAGTCCTGGGGAAGCAATTGAGTCTCAAAGTAGAGGCAG GGGAAAAAAGAGTTAGGGAGACCAGATCTGCTGAGTGGCAGCAAGAGTGAGCTGCAGATTACAGAAACCAGGGTGAGCAAGTTTGAGTCC CACACAGGGCCTTCTCCCTTTGCCTCTTTCCCTCCCTCCCTGCCTGTGATAATCAGCCAGGAGCCAGGGATAACCTATGACTTGGGAAAG AGATGAGTTAGGCAGTCAAGGGTGACATTCAATCAGGGATCCACAAGTGGCTGGAAAGAAATGCTGGTCCTGTGTCCTAACTTTTTCCGC CTGGAGAGCCCTCAGTGTGGCTTCTTACATTTAAAAAACAAAAAGGATCAGCTGCCAGGTGTGAGGCAGTCCCCAAGCTGAGTTGTGAGG ATGTAAGCATGAATAAGTCCCTGCACTCAAAATGGTCAAAGAATTAAACCCCATGGACTTTTTTGGCATCTGTATGAAAGCTTGGGTTTT CTGAGGACTGTCTTGCTATAGTTAAGTCAGATCCTAGATGAAATATACTTGTTCATACTGTACTAGGTTCTTAGGAAACAACAGAATTCC TCAAATGCCAAAAACAAAGAAAATAGAAACCCAGAAAACAAAACAAAATAAAACAAAACCATCAGAACTGTGAGTGGAAACTAAGGTGAT GATCTGGGAGCAATACACTAAAATCTTGGGTCGAGACCTATATGAAGGCTGGCAGTGGAGCTAAACCTGGACACACTGAAGACAAGGGAG CTGAACCAGGGCTCCTACATGAAGCAGGGATAACTGATGGCAGTAAATGTGGTCTCAAATTGCAGATGGTCTGGAGGAAAATTTCCCAAA TTTAGAGCCTCAGGATTCCCAAAGATCCTCCAAATATGAGCTCACAATCAAAGATCAGAGACGTTGAAAAATAAAAAACACCTTAAGTGG GCAGCATAAAAAACAGCTAATTTAGAACCCCAAAGGCTTCAGATGTCAGAATATTAGAGACTTATGATAATAAGCAATATTTGCAGAGTA TTTGTATGTGCCAGACACTATTGTAAGTGCTTCATCATGTACTGATTCATTTAATACTCACAGAAATCTGTGAGATGGGTATTATTCTTA TCCTCACTCTATGGATTAAAAAAACTAAGGCACAAAGTGGTTAAGCTCCTTGCCTGAGATTATAGACTGTAAGTTGAACGTGAGCACTTG GAATACAGAGTTCATGCTGTAAACTACCACACTATAGGGCCTCCAATATGATAATTTATAAAATATTTGAATAAAAAATGAATACTAGTT CCACATTTTAAAATCATGTTTAACTGTGGTCAAATGCACATAACACAAGTTGCCATCTTCACCATTTTTAGGTGTATAGTTCAGTGGTGT TATGTACATTCACACTATTGTGCAGTCATCACCACCATCCATCTCCAGAACAGAAACTCAGTACCCATCAAACAACTCTCCATTTCCCCC TCCTCCCAATCTCTGGCAACCACCATTGTGCTTTCAGTCTCTGTGAACTGGATTACTCTGGGTACCTCATTTAAGTGAAGTCATGCAGTA TTGGTCTTTTTGTACTTGTTTTATTTCACTTCACATTGTGTCTTCAAGTTTCACCCATGTTGTAGCATGTGTCAGAATTTCTTCCCTTTT TAGACTAAATAATATTCTATTGTTTATACGAACATTCAGGTTACTTCTATCTTTTGGCTATTGTGAATTATGCTGCTGTGAACATGGGTG TACAAGTATCTCTTTGAGGCCCTGCTTTCAATTCTCTTGGGTATATTCCCAGAAGTGGAATTGCTGGATCATATGGTAATTCTATTTTGA ATTTTTTGAGGAACTGATATATTGCTTTCCATAGAGACTGCACCATTTTACATTCCCATCAACAGTTTGCAGGAGTTACTATTTCTCCAT ATCCCCCCTAACACTTGCTATTTTCTGTTAAAAATGGATATCTTAATAATCAAGCAAAAATAACAGGCAGATTTGAAAAAGAACTGAATA CAGCTTTTAGAAATAAAAACTATAATTATAAAAATAAAAAACTAAGTGGATGGGGTAAATAACAATTAAAACACCAATTAAGAGAGAACA AATGAACTGGAAGATAAATTGAAGAAGTGACTAGGCTTAACAGCAGAGAGAGATAAGGAGATTAAAAATATGAAAACAAGGCCAGGAGCA ATGAAGCCTAGAATGGTAAATTCTAACATATCCAGAATCCCAGAAAGAGAGAATCAAGACAATGAGAGAGAGACAGTACCAAAGAGATAA GAGCTGAGAATGTTCCAGAATTGATAAAAGGTGTGAATCCACAGAACATACACCACCATAGTGTACACGCATACAACCAAGGTGGAAAAA TTAGAATAAATCCACACCTATGTACATTATAATGAAACTGCAGAACACCAAAGACAAAAAGAAACTCCTTATAGCAGCAGAGAGAAAACC CAGACCACCCACAGTACCACAAATCTACCACAATTAGACTGACAACAGGCTTTCCCACAGCAATAAAGGAGCTAGAAGTCAGTGGAAGTA TATCTCCAGCATGCCAAAAGATAACAATCAATCAGGGATTGTGAACCCTACAAAACTATCTTTCAAGAATAAAGGCATTTTCAAGAAAAC AAAAACAGACTTTACCATCAACAAACCTTCTCTAAAAGAATATATAAAGCATTTACTTTAGGAAGAAGGAAAATGATCCTAAAAGGAAGA ACCAAGAAGCAAGTAGCAATAGTGAGGCAATTGTGAAAATGTAGGTAAGTCTAAACACACTCTGTCTACTTCTTCTTCTTCTTCTTCTTC TTCTTCTTCTTATTTTGAGACTGAGTCTTGCCCTGTCACCCAGACTGGAGTGCAGTGGCAGGATCTTGGCTCACTGCTATCTCCACCTCC CAGGTTCAAGTGATTCTTCTGCCTCAGCCTCCCGAGTAGCTGGGATTACATGCACATGCCACCATATCCGGCTAATTTTTGAATTTTTAG TAGAGATGGGGTTTCACTGTGTTGGCCAGGCCGGTCTCAAACTCCCGACCTCAAGTGATCCCCCCGCCTCGGCCTCCCAAAGTGCTGGGA TTACAGGCGTGTCTACATATTATTAAAATAACAATAATATTTATTTTGTGGGTTAATTTTTTTTGAAACAGATATTGAATTTATTGGTTG GCTATGAGTAGAAAAATACATCAGTAAAGAAAAAAGACCCTGTATATAAATATAATACTAGCTAGTTAAAATTTGACCAAGAAGTTTCCA |
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FusionGenePPI for GRIK4_TMPRSS4 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
GRIK4 | RAB5A, RUFY1, EGFR | TMPRSS4 | CLEC7A, TMEM79, CCDC155, SYNE4, LMNA |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for GRIK4_TMPRSS4 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Hgene | GRIK4 | Q16099 | DB00142 | Glutamic Acid | Glutamate receptor ionotropic, kainate 4 | small molecule | approved|nutraceutical |
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RelatedDiseases for GRIK4_TMPRSS4 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | GRIK4 | C0005586 | Bipolar Disorder | 5 | PSYGENET |
Hgene | GRIK4 | C0036341 | Schizophrenia | 4 | PSYGENET |
Hgene | GRIK4 | C0005587 | Depression, Bipolar | 1 | PSYGENET |
Hgene | GRIK4 | C0033975 | Psychotic Disorders | 1 | PSYGENET |
Hgene | GRIK4 | C0041696 | Unipolar Depression | 1 | PSYGENET |
Hgene | GRIK4 | C0349204 | Nonorganic psychosis | 1 | PSYGENET |
Hgene | GRIK4 | C1269683 | Major Depressive Disorder | 1 | PSYGENET |