Fusion gene information | Fusion gene name: GPRC5A_DSP |
Fusion gene ID: 15298 | | Hgene | Tgene | Gene symbol | GPRC5A | DSP | Gene ID | 9052 | 1832 | Gene name | G protein-coupled receptor class C group 5 member A | desmoplakin |
Synonyms | GPCR5A|PEIG-1|RAI3|RAIG1|TIG1 | DCWHKTA|DP |
Cytomap | 12p13.1 | 6p24.3 |
Type of gene | protein-coding | protein-coding |
Description | retinoic acid-induced protein 3G-protein coupled receptor family C group 5 member ATPA induced gene 1orphan G-protein-coupling receptor PEIG-1phorbol ester induced gene 1phorbol ester induced protein-1retinoic acid induced 3retinoic acid responsive | desmoplakin250/210 kDa paraneoplastic pemphigus antigen |
Modification date | 20180522 | 20180523 |
UniProtAcc | Q8NFJ5 | P15924 |
Ensembl transtripts involved in fusion gene | ENST00000014914, ENST00000542056,
| ENST00000379802, ENST00000418664,
|
Fusion gene scores | * DoF score | 4 X 4 X 2=32 | 17 X 15 X 8=2040 |
# samples | 4 | 22 |
** MAII score | log2(4/32*10)=0.321928094887362 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | log2(22/2040*10)=-3.2129937233342 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 |
Context | PubMed: GPRC5A [Title/Abstract] AND DSP [Title/Abstract] AND fusion [Title/Abstract] |
Functional or gene categories assigned by FusionGDB annotation | |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | >DSP | chr12:13061511 | chr6:7585640 | ENST00000379802 | + | 0 | 24 | 1018_1945 | -114 | 2872 | Coiled coil | Ontology_term=ECO:0000255 |
Tgene | >DSP | chr12:13061511 | chr6:7585640 | ENST00000418664 | + | 0 | 24 | 1018_1945 | -100 | 2273 | Coiled coil | Ontology_term=ECO:0000255 |
Tgene | >DSP | chr12:13061511 | chr6:7585640 | ENST00000379802 | + | 0 | 24 | 458_515 | -114 | 2872 | Domain | SH3 |
Tgene | >DSP | chr12:13061511 | chr6:7585640 | ENST00000418664 | + | 0 | 24 | 458_515 | -100 | 2273 | Domain | SH3 |
Tgene | >DSP | chr12:13061511 | chr6:7585640 | ENST00000379802 | + | 0 | 24 | 1057_1945 | -114 | 2872 | Region | Note=Central fibrous rod domain |
Tgene | >DSP | chr12:13061511 | chr6:7585640 | ENST00000379802 | + | 0 | 24 | 1946_2871 | -114 | 2872 | Region | Note=Globular 2 |
Tgene | >DSP | chr12:13061511 | chr6:7585640 | ENST00000379802 | + | 0 | 24 | 1960_2208 | -114 | 2872 | Region | Note=4.5 X 38 AA tandem repeats (Domain A) |
Tgene | >DSP | chr12:13061511 | chr6:7585640 | ENST00000379802 | + | 0 | 24 | 1_1056 | -114 | 2872 | Region | Note=Globular 1 |
Tgene | >DSP | chr12:13061511 | chr6:7585640 | ENST00000379802 | + | 0 | 24 | 2244_2446 | -114 | 2872 | Region | Note=4.5 X 38 AA tandem repeats (Domain B) |
Tgene | >DSP | chr12:13061511 | chr6:7585640 | ENST00000379802 | + | 0 | 24 | 2609_2822 | -114 | 2872 | Region | Note=4.5 X 38 AA tandem repeats (Domain C) |
Tgene | >DSP | chr12:13061511 | chr6:7585640 | ENST00000379802 | + | 0 | 24 | 2824_2847 | -114 | 2872 | Region | Note=6 X 4 AA tandem repeats of G-S-R-[SR] |
Tgene | >DSP | chr12:13061511 | chr6:7585640 | ENST00000418664 | + | 0 | 24 | 1057_1945 | -100 | 2273 | Region | Note=Central fibrous rod domain |
Tgene | >DSP | chr12:13061511 | chr6:7585640 | ENST00000418664 | + | 0 | 24 | 1946_2871 | -100 | 2273 | Region | Note=Globular 2 |
Tgene | >DSP | chr12:13061511 | chr6:7585640 | ENST00000418664 | + | 0 | 24 | 1960_2208 | -100 | 2273 | Region | Note=4.5 X 38 AA tandem repeats (Domain A) |
Tgene | >DSP | chr12:13061511 | chr6:7585640 | ENST00000418664 | + | 0 | 24 | 1_1056 | -100 | 2273 | Region | Note=Globular 1 |
Tgene | >DSP | chr12:13061511 | chr6:7585640 | ENST00000418664 | + | 0 | 24 | 2244_2446 | -100 | 2273 | Region | Note=4.5 X 38 AA tandem repeats (Domain B) |
Tgene | >DSP | chr12:13061511 | chr6:7585640 | ENST00000418664 | + | 0 | 24 | 2609_2822 | -100 | 2273 | Region | Note=4.5 X 38 AA tandem repeats (Domain C) |
Tgene | >DSP | chr12:13061511 | chr6:7585640 | ENST00000418664 | + | 0 | 24 | 2824_2847 | -100 | 2273 | Region | Note=6 X 4 AA tandem repeats of G-S-R-[SR] |
Tgene | >DSP | chr12:13061511 | chr6:7585640 | ENST00000379802 | + | 0 | 24 | 178_271 | -114 | 2872 | Repeat | Note=Spectrin 1 |
Tgene | >DSP | chr12:13061511 | chr6:7585640 | ENST00000379802 | + | 0 | 24 | 2009_2045 | -114 | 2872 | Repeat | Note=Plectin 1 |
Tgene | >DSP | chr12:13061511 | chr6:7585640 | ENST00000379802 | + | 0 | 24 | 2046_2083 | -114 | 2872 | Repeat | Note=Plectin 2 |
Tgene | >DSP | chr12:13061511 | chr6:7585640 | ENST00000379802 | + | 0 | 24 | 2084_2121 | -114 | 2872 | Repeat | Note=Plectin 3 |
Tgene | >DSP | chr12:13061511 | chr6:7585640 | ENST00000379802 | + | 0 | 24 | 2122_2159 | -114 | 2872 | Repeat | Note=Plectin 4 |
Tgene | >DSP | chr12:13061511 | chr6:7585640 | ENST00000379802 | + | 0 | 24 | 2163_2197 | -114 | 2872 | Repeat | Note=Plectin 5 |
Tgene | >DSP | chr12:13061511 | chr6:7585640 | ENST00000379802 | + | 0 | 24 | 2198_2233 | -114 | 2872 | Repeat | Note=Plectin 6 |
Tgene | >DSP | chr12:13061511 | chr6:7585640 | ENST00000379802 | + | 0 | 24 | 2251_2288 | -114 | 2872 | Repeat | Note=Plectin 7 |
Tgene | >DSP | chr12:13061511 | chr6:7585640 | ENST00000379802 | + | 0 | 24 | 2289_2326 | -114 | 2872 | Repeat | Note=Plectin 8 |
Tgene | >DSP | chr12:13061511 | chr6:7585640 | ENST00000379802 | + | 0 | 24 | 2327_2364 | -114 | 2872 | Repeat | Note=Plectin 9 |
Tgene | >DSP | chr12:13061511 | chr6:7585640 | ENST00000379802 | + | 0 | 24 | 2365_2402 | -114 | 2872 | Repeat | Note=Plectin 10 |
Tgene | >DSP | chr12:13061511 | chr6:7585640 | ENST00000379802 | + | 0 | 24 | 2406_2440 | -114 | 2872 | Repeat | Note=Plectin 11 |
Tgene | >DSP | chr12:13061511 | chr6:7585640 | ENST00000379802 | + | 0 | 24 | 2456_2493 | -114 | 2872 | Repeat | Note=Plectin 12 |
Tgene | >DSP | chr12:13061511 | chr6:7585640 | ENST00000379802 | + | 0 | 24 | 2507_2544 | -114 | 2872 | Repeat | Note=Plectin 13 |
Tgene | >DSP | chr12:13061511 | chr6:7585640 | ENST00000379802 | + | 0 | 24 | 2610_2647 | -114 | 2872 | Repeat | Note=Plectin 14 |
Tgene | >DSP | chr12:13061511 | chr6:7585640 | ENST00000379802 | + | 0 | 24 | 2648_2685 | -114 | 2872 | Repeat | Note=Plectin 15 |
Tgene | >DSP | chr12:13061511 | chr6:7585640 | ENST00000379802 | + | 0 | 24 | 2724_2761 | -114 | 2872 | Repeat | Note=Plectin 16 |
Tgene | >DSP | chr12:13061511 | chr6:7585640 | ENST00000379802 | + | 0 | 24 | 272_375 | -114 | 2872 | Repeat | Note=Spectrin 2 |
Tgene | >DSP | chr12:13061511 | chr6:7585640 | ENST00000379802 | + | 0 | 24 | 2762_2799 | -114 | 2872 | Repeat | Note=Plectin 17 |
Tgene | >DSP | chr12:13061511 | chr6:7585640 | ENST00000379802 | + | 0 | 24 | 376_446 | -114 | 2872 | Repeat | Note=Spectrin 3a |
Tgene | >DSP | chr12:13061511 | chr6:7585640 | ENST00000379802 | + | 0 | 24 | 516_545 | -114 | 2872 | Repeat | Note=Spectrin 3b |
Tgene | >DSP | chr12:13061511 | chr6:7585640 | ENST00000379802 | + | 0 | 24 | 546_627 | -114 | 2872 | Repeat | Note=Spectrin 4 |
Tgene | >DSP | chr12:13061511 | chr6:7585640 | ENST00000379802 | + | 0 | 24 | 654_769 | -114 | 2872 | Repeat | Note=Spectrin 5 |
Tgene | >DSP | chr12:13061511 | chr6:7585640 | ENST00000379802 | + | 0 | 24 | 770_883 | -114 | 2872 | Repeat | Note=Spectrin 6 |
Tgene | >DSP | chr12:13061511 | chr6:7585640 | ENST00000418664 | + | 0 | 24 | 178_271 | -100 | 2273 | Repeat | Note=Spectrin 1 |
Tgene | >DSP | chr12:13061511 | chr6:7585640 | ENST00000418664 | + | 0 | 24 | 2009_2045 | -100 | 2273 | Repeat | Note=Plectin 1 |
Tgene | >DSP | chr12:13061511 | chr6:7585640 | ENST00000418664 | + | 0 | 24 | 2046_2083 | -100 | 2273 | Repeat | Note=Plectin 2 |
Tgene | >DSP | chr12:13061511 | chr6:7585640 | ENST00000418664 | + | 0 | 24 | 2084_2121 | -100 | 2273 | Repeat | Note=Plectin 3 |
Tgene | >DSP | chr12:13061511 | chr6:7585640 | ENST00000418664 | + | 0 | 24 | 2122_2159 | -100 | 2273 | Repeat | Note=Plectin 4 |
Tgene | >DSP | chr12:13061511 | chr6:7585640 | ENST00000418664 | + | 0 | 24 | 2163_2197 | -100 | 2273 | Repeat | Note=Plectin 5 |
Tgene | >DSP | chr12:13061511 | chr6:7585640 | ENST00000418664 | + | 0 | 24 | 2198_2233 | -100 | 2273 | Repeat | Note=Plectin 6 |
Tgene | >DSP | chr12:13061511 | chr6:7585640 | ENST00000418664 | + | 0 | 24 | 2251_2288 | -100 | 2273 | Repeat | Note=Plectin 7 |
Tgene | >DSP | chr12:13061511 | chr6:7585640 | ENST00000418664 | + | 0 | 24 | 2289_2326 | -100 | 2273 | Repeat | Note=Plectin 8 |
Tgene | >DSP | chr12:13061511 | chr6:7585640 | ENST00000418664 | + | 0 | 24 | 2327_2364 | -100 | 2273 | Repeat | Note=Plectin 9 |
Tgene | >DSP | chr12:13061511 | chr6:7585640 | ENST00000418664 | + | 0 | 24 | 2365_2402 | -100 | 2273 | Repeat | Note=Plectin 10 |
Tgene | >DSP | chr12:13061511 | chr6:7585640 | ENST00000418664 | + | 0 | 24 | 2406_2440 | -100 | 2273 | Repeat | Note=Plectin 11 |
Tgene | >DSP | chr12:13061511 | chr6:7585640 | ENST00000418664 | + | 0 | 24 | 2456_2493 | -100 | 2273 | Repeat | Note=Plectin 12 |
Tgene | >DSP | chr12:13061511 | chr6:7585640 | ENST00000418664 | + | 0 | 24 | 2507_2544 | -100 | 2273 | Repeat | Note=Plectin 13 |
Tgene | >DSP | chr12:13061511 | chr6:7585640 | ENST00000418664 | + | 0 | 24 | 2610_2647 | -100 | 2273 | Repeat | Note=Plectin 14 |
Tgene | >DSP | chr12:13061511 | chr6:7585640 | ENST00000418664 | + | 0 | 24 | 2648_2685 | -100 | 2273 | Repeat | Note=Plectin 15 |
Tgene | >DSP | chr12:13061511 | chr6:7585640 | ENST00000418664 | + | 0 | 24 | 2724_2761 | -100 | 2273 | Repeat | Note=Plectin 16 |
Tgene | >DSP | chr12:13061511 | chr6:7585640 | ENST00000418664 | + | 0 | 24 | 272_375 | -100 | 2273 | Repeat | Note=Spectrin 2 |
Tgene | >DSP | chr12:13061511 | chr6:7585640 | ENST00000418664 | + | 0 | 24 | 2762_2799 | -100 | 2273 | Repeat | Note=Plectin 17 |
Tgene | >DSP | chr12:13061511 | chr6:7585640 | ENST00000418664 | + | 0 | 24 | 376_446 | -100 | 2273 | Repeat | Note=Spectrin 3a |
Tgene | >DSP | chr12:13061511 | chr6:7585640 | ENST00000418664 | + | 0 | 24 | 516_545 | -100 | 2273 | Repeat | Note=Spectrin 3b |
Tgene | >DSP | chr12:13061511 | chr6:7585640 | ENST00000418664 | + | 0 | 24 | 546_627 | -100 | 2273 | Repeat | Note=Spectrin 4 |
Tgene | >DSP | chr12:13061511 | chr6:7585640 | ENST00000418664 | + | 0 | 24 | 654_769 | -100 | 2273 | Repeat | Note=Spectrin 5 |
Tgene | >DSP | chr12:13061511 | chr6:7585640 | ENST00000418664 | + | 0 | 24 | 770_883 | -100 | 2273 | Repeat | Note=Spectrin 6 |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | GPRC5A | C0003873 | Rheumatoid Arthritis | 1 | CTD_human |
Tgene | DSP | C1843896 | Arrhythmogenic Right Ventricular Dysplasia, Familial, 8 | 3 | CTD_human;UNIPROT |
Tgene | DSP | C4014393 | CARDIOMYOPATHY, DILATED, WITH WOOLLY HAIR, KERATODERMA, AND TOOTH AGENESIS | 2 | UNIPROT |
Tgene | DSP | C0085298 | Sudden Cardiac Death | 1 | CTD_human;HPO |
Tgene | DSP | C1800706 | Idiopathic Pulmonary Fibrosis | 1 | CTD_human;ORPHANET |
Tgene | DSP | C1843292 | Skin Fragility-Woolly Hair Syndrome | 1 | CTD_human;ORPHANET;UNIPROT |
Tgene | DSP | C1854063 | Cardiomyopathy dilated with Woolly hair and keratoderma | 1 | CTD_human;ORPHANET |