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Fusion gene ID: 15063 |
FusionGeneSummary for GOLIM4_MECOM |
Fusion gene summary |
Fusion gene information | Fusion gene name: GOLIM4_MECOM | Fusion gene ID: 15063 | Hgene | Tgene | Gene symbol | GOLIM4 | MECOM | Gene ID | 27333 | 2122 |
Gene name | golgi integral membrane protein 4 | MDS1 and EVI1 complex locus | |
Synonyms | GIMPC|GOLPH4|GPP130|P138 | AML1-EVI-1|EVI1|KMT8E|MDS1|MDS1-EVI1|PRDM3|RUSAT2 | |
Cytomap | 3q26.2 | 3q26.2 | |
Type of gene | protein-coding | protein-coding | |
Description | Golgi integral membrane protein 4130 kDa golgi-localized phosphoproteincis Golgi-localized calcium-binding proteingolgi integral membrane protein, cisgolgi phosphoprotein 4golgi phosphoprotein of 130 kDagolgi-localized phosphoprotein of 130 kDatype | MDS1 and EVI1 complex locus proteinMDS1 and EVI1 complex locus protein EVI1AML1-EVI-1 fusion proteinMDS1 and EVI1 complex locus protein MDS1PR domain 3ecotropic virus integration site 1 protein homologmyelodysplasia syndrome-associated protein 1onc | |
Modification date | 20180519 | 20180522 | |
UniProtAcc | O00461 | Q03112 | |
Ensembl transtripts involved in fusion gene | ENST00000470487, ENST00000309027, | ENST00000264674, ENST00000392736, ENST00000464456, ENST00000472280, ENST00000494292, ENST00000468789, ENST00000460814, ENST00000433243, ENST00000485957, | |
Fusion gene scores | * DoF score | 10 X 5 X 9=450 | 8 X 7 X 6=336 |
# samples | 10 | 10 | |
** MAII score | log2(10/450*10)=-2.16992500144231 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(10/336*10)=-1.74846123300404 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: GOLIM4 [Title/Abstract] AND MECOM [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation | Oncogene involved fusion gene, in-frame and retained their domain. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Tgene | MECOM | GO:0045892 | negative regulation of transcription, DNA-templated | 10856240|11568182 |
Tgene | MECOM | GO:0045893 | positive regulation of transcription, DNA-templated | 11568182|19767769 |
Tgene | MECOM | GO:0051726 | regulation of cell cycle | 11568182 |
Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | RV | SKCM | TCGA-W3-A828-06A | GOLIM4 | chr3 | 167742314 | - | MECOM | chr3 | 168861620 | - |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000470487 | ENST00000264674 | GOLIM4 | chr3 | 167742314 | - | MECOM | chr3 | 168861620 | - |
5CDS-5UTR | ENST00000470487 | ENST00000392736 | GOLIM4 | chr3 | 167742314 | - | MECOM | chr3 | 168861620 | - |
5CDS-5UTR | ENST00000470487 | ENST00000464456 | GOLIM4 | chr3 | 167742314 | - | MECOM | chr3 | 168861620 | - |
5CDS-5UTR | ENST00000470487 | ENST00000472280 | GOLIM4 | chr3 | 167742314 | - | MECOM | chr3 | 168861620 | - |
5CDS-5UTR | ENST00000470487 | ENST00000494292 | GOLIM4 | chr3 | 167742314 | - | MECOM | chr3 | 168861620 | - |
5CDS-5UTR | ENST00000470487 | ENST00000468789 | GOLIM4 | chr3 | 167742314 | - | MECOM | chr3 | 168861620 | - |
5CDS-intron | ENST00000470487 | ENST00000460814 | GOLIM4 | chr3 | 167742314 | - | MECOM | chr3 | 168861620 | - |
5CDS-5UTR | ENST00000470487 | ENST00000433243 | GOLIM4 | chr3 | 167742314 | - | MECOM | chr3 | 168861620 | - |
5CDS-intron | ENST00000470487 | ENST00000485957 | GOLIM4 | chr3 | 167742314 | - | MECOM | chr3 | 168861620 | - |
In-frame | ENST00000309027 | ENST00000264674 | GOLIM4 | chr3 | 167742314 | - | MECOM | chr3 | 168861620 | - |
5CDS-5UTR | ENST00000309027 | ENST00000392736 | GOLIM4 | chr3 | 167742314 | - | MECOM | chr3 | 168861620 | - |
5CDS-5UTR | ENST00000309027 | ENST00000464456 | GOLIM4 | chr3 | 167742314 | - | MECOM | chr3 | 168861620 | - |
5CDS-5UTR | ENST00000309027 | ENST00000472280 | GOLIM4 | chr3 | 167742314 | - | MECOM | chr3 | 168861620 | - |
5CDS-5UTR | ENST00000309027 | ENST00000494292 | GOLIM4 | chr3 | 167742314 | - | MECOM | chr3 | 168861620 | - |
5CDS-5UTR | ENST00000309027 | ENST00000468789 | GOLIM4 | chr3 | 167742314 | - | MECOM | chr3 | 168861620 | - |
5CDS-intron | ENST00000309027 | ENST00000460814 | GOLIM4 | chr3 | 167742314 | - | MECOM | chr3 | 168861620 | - |
5CDS-5UTR | ENST00000309027 | ENST00000433243 | GOLIM4 | chr3 | 167742314 | - | MECOM | chr3 | 168861620 | - |
5CDS-intron | ENST00000309027 | ENST00000485957 | GOLIM4 | chr3 | 167742314 | - | MECOM | chr3 | 168861620 | - |
Top |
FusionProtFeatures for GOLIM4_MECOM |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
GOLIM4 | MECOM |
Plays a role in endosome to Golgi protein trafficking;mediates protein transport along the late endosome-bypass pathwayfrom the early endosome to the Golgi.{ECO:0000269|PubMed:15331763}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | GOLIM4 | chr3:167742314 | chr3:168861620 | ENST00000470487 | - | 14 | 16 | 35_244 | 620 | 697 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | GOLIM4 | chr3:167742314 | chr3:168861620 | ENST00000470487 | - | 14 | 16 | 404_513 | 620 | 697 | Compositional bias | Note=Gln-rich |
Hgene | GOLIM4 | chr3:167742314 | chr3:168861620 | ENST00000470487 | - | 14 | 16 | 176_248 | 620 | 697 | Region | Note=Golgi targeting |
Hgene | GOLIM4 | chr3:167742314 | chr3:168861620 | ENST00000470487 | - | 14 | 16 | 38_107 | 620 | 697 | Region | Note=Golgi targeting |
Hgene | GOLIM4 | chr3:167742314 | chr3:168861620 | ENST00000470487 | - | 14 | 16 | 80_175 | 620 | 697 | Region | Note=Endosome targeting |
Hgene | GOLIM4 | chr3:167742314 | chr3:168861620 | ENST00000470487 | - | 14 | 16 | 2_12 | 620 | 697 | Topological domain | Cytoplasmic |
Hgene | GOLIM4 | chr3:167742314 | chr3:168861620 | ENST00000470487 | - | 14 | 16 | 13_33 | 620 | 697 | Transmembrane | Helical%3B Signal-anchor for type II membrane protein |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000264674 | - | 1 | 17 | 1065_1116 | 1 | 1117 | Compositional bias | Note=Asp/Glu-rich (acidic) |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000392736 | - | 0 | 16 | 1065_1116 | -63 | 1052 | Compositional bias | Note=Asp/Glu-rich (acidic) |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000433243 | - | 1 | 17 | 1065_1116 | -63 | 1053 | Compositional bias | Note=Asp/Glu-rich (acidic) |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000464456 | - | 0 | 15 | 1065_1116 | -63 | 1043 | Compositional bias | Note=Asp/Glu-rich (acidic) |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000468789 | - | 0 | 16 | 1065_1116 | -63 | 1052 | Compositional bias | Note=Asp/Glu-rich (acidic) |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000472280 | - | 0 | 16 | 1065_1116 | -63 | 1053 | Compositional bias | Note=Asp/Glu-rich (acidic) |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000264674 | - | 1 | 17 | 78_190 | 1 | 1117 | Domain | SET |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000392736 | - | 0 | 16 | 78_190 | -63 | 1052 | Domain | SET |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000433243 | - | 1 | 17 | 78_190 | -63 | 1053 | Domain | SET |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000464456 | - | 0 | 15 | 78_190 | -63 | 1043 | Domain | SET |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000468789 | - | 0 | 16 | 78_190 | -63 | 1052 | Domain | SET |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000472280 | - | 0 | 16 | 78_190 | -63 | 1053 | Domain | SET |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000264674 | - | 1 | 17 | 609_622 | 1 | 1117 | Motif | Nuclear localization signal |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000264674 | - | 1 | 17 | 741_745 | 1 | 1117 | Motif | CTBP-binding motif 1 |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000264674 | - | 1 | 17 | 772_776 | 1 | 1117 | Motif | CTBP-binding motif 2 |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000392736 | - | 0 | 16 | 609_622 | -63 | 1052 | Motif | Nuclear localization signal |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000392736 | - | 0 | 16 | 741_745 | -63 | 1052 | Motif | CTBP-binding motif 1 |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000392736 | - | 0 | 16 | 772_776 | -63 | 1052 | Motif | CTBP-binding motif 2 |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000433243 | - | 1 | 17 | 609_622 | -63 | 1053 | Motif | Nuclear localization signal |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000433243 | - | 1 | 17 | 741_745 | -63 | 1053 | Motif | CTBP-binding motif 1 |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000433243 | - | 1 | 17 | 772_776 | -63 | 1053 | Motif | CTBP-binding motif 2 |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000464456 | - | 0 | 15 | 609_622 | -63 | 1043 | Motif | Nuclear localization signal |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000464456 | - | 0 | 15 | 741_745 | -63 | 1043 | Motif | CTBP-binding motif 1 |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000464456 | - | 0 | 15 | 772_776 | -63 | 1043 | Motif | CTBP-binding motif 2 |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000468789 | - | 0 | 16 | 609_622 | -63 | 1052 | Motif | Nuclear localization signal |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000468789 | - | 0 | 16 | 741_745 | -63 | 1052 | Motif | CTBP-binding motif 1 |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000468789 | - | 0 | 16 | 772_776 | -63 | 1052 | Motif | CTBP-binding motif 2 |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000472280 | - | 0 | 16 | 609_622 | -63 | 1053 | Motif | Nuclear localization signal |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000472280 | - | 0 | 16 | 741_745 | -63 | 1053 | Motif | CTBP-binding motif 1 |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000472280 | - | 0 | 16 | 772_776 | -63 | 1053 | Motif | CTBP-binding motif 2 |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000264674 | - | 1 | 17 | 209_236 | 1 | 1117 | Zinc finger | C2H2-type 1 |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000264674 | - | 1 | 17 | 263_285 | 1 | 1117 | Zinc finger | C2H2-type 2 |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000264674 | - | 1 | 17 | 291_313 | 1 | 1117 | Zinc finger | C2H2-type 3 |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000264674 | - | 1 | 17 | 319_342 | 1 | 1117 | Zinc finger | C2H2-type 4 |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000264674 | - | 1 | 17 | 348_370 | 1 | 1117 | Zinc finger | C2H2-type 5 |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000264674 | - | 1 | 17 | 376_398 | 1 | 1117 | Zinc finger | C2H2-type 6 |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000264674 | - | 1 | 17 | 405_427 | 1 | 1117 | Zinc finger | C2H2-type 7%3B atypical |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000264674 | - | 1 | 17 | 912_934 | 1 | 1117 | Zinc finger | C2H2-type 8 |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000264674 | - | 1 | 17 | 940_963 | 1 | 1117 | Zinc finger | C2H2-type 9 |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000264674 | - | 1 | 17 | 969_991 | 1 | 1117 | Zinc finger | C2H2-type 10 |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000392736 | - | 0 | 16 | 209_236 | -63 | 1052 | Zinc finger | C2H2-type 1 |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000392736 | - | 0 | 16 | 263_285 | -63 | 1052 | Zinc finger | C2H2-type 2 |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000392736 | - | 0 | 16 | 291_313 | -63 | 1052 | Zinc finger | C2H2-type 3 |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000392736 | - | 0 | 16 | 319_342 | -63 | 1052 | Zinc finger | C2H2-type 4 |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000392736 | - | 0 | 16 | 348_370 | -63 | 1052 | Zinc finger | C2H2-type 5 |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000392736 | - | 0 | 16 | 376_398 | -63 | 1052 | Zinc finger | C2H2-type 6 |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000392736 | - | 0 | 16 | 405_427 | -63 | 1052 | Zinc finger | C2H2-type 7%3B atypical |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000392736 | - | 0 | 16 | 912_934 | -63 | 1052 | Zinc finger | C2H2-type 8 |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000392736 | - | 0 | 16 | 940_963 | -63 | 1052 | Zinc finger | C2H2-type 9 |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000392736 | - | 0 | 16 | 969_991 | -63 | 1052 | Zinc finger | C2H2-type 10 |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000433243 | - | 1 | 17 | 209_236 | -63 | 1053 | Zinc finger | C2H2-type 1 |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000433243 | - | 1 | 17 | 263_285 | -63 | 1053 | Zinc finger | C2H2-type 2 |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000433243 | - | 1 | 17 | 291_313 | -63 | 1053 | Zinc finger | C2H2-type 3 |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000433243 | - | 1 | 17 | 319_342 | -63 | 1053 | Zinc finger | C2H2-type 4 |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000433243 | - | 1 | 17 | 348_370 | -63 | 1053 | Zinc finger | C2H2-type 5 |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000433243 | - | 1 | 17 | 376_398 | -63 | 1053 | Zinc finger | C2H2-type 6 |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000433243 | - | 1 | 17 | 405_427 | -63 | 1053 | Zinc finger | C2H2-type 7%3B atypical |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000433243 | - | 1 | 17 | 912_934 | -63 | 1053 | Zinc finger | C2H2-type 8 |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000433243 | - | 1 | 17 | 940_963 | -63 | 1053 | Zinc finger | C2H2-type 9 |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000433243 | - | 1 | 17 | 969_991 | -63 | 1053 | Zinc finger | C2H2-type 10 |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000464456 | - | 0 | 15 | 209_236 | -63 | 1043 | Zinc finger | C2H2-type 1 |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000464456 | - | 0 | 15 | 263_285 | -63 | 1043 | Zinc finger | C2H2-type 2 |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000464456 | - | 0 | 15 | 291_313 | -63 | 1043 | Zinc finger | C2H2-type 3 |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000464456 | - | 0 | 15 | 319_342 | -63 | 1043 | Zinc finger | C2H2-type 4 |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000464456 | - | 0 | 15 | 348_370 | -63 | 1043 | Zinc finger | C2H2-type 5 |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000464456 | - | 0 | 15 | 376_398 | -63 | 1043 | Zinc finger | C2H2-type 6 |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000464456 | - | 0 | 15 | 405_427 | -63 | 1043 | Zinc finger | C2H2-type 7%3B atypical |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000464456 | - | 0 | 15 | 912_934 | -63 | 1043 | Zinc finger | C2H2-type 8 |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000464456 | - | 0 | 15 | 940_963 | -63 | 1043 | Zinc finger | C2H2-type 9 |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000464456 | - | 0 | 15 | 969_991 | -63 | 1043 | Zinc finger | C2H2-type 10 |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000468789 | - | 0 | 16 | 209_236 | -63 | 1052 | Zinc finger | C2H2-type 1 |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000468789 | - | 0 | 16 | 263_285 | -63 | 1052 | Zinc finger | C2H2-type 2 |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000468789 | - | 0 | 16 | 291_313 | -63 | 1052 | Zinc finger | C2H2-type 3 |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000468789 | - | 0 | 16 | 319_342 | -63 | 1052 | Zinc finger | C2H2-type 4 |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000468789 | - | 0 | 16 | 348_370 | -63 | 1052 | Zinc finger | C2H2-type 5 |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000468789 | - | 0 | 16 | 376_398 | -63 | 1052 | Zinc finger | C2H2-type 6 |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000468789 | - | 0 | 16 | 405_427 | -63 | 1052 | Zinc finger | C2H2-type 7%3B atypical |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000468789 | - | 0 | 16 | 912_934 | -63 | 1052 | Zinc finger | C2H2-type 8 |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000468789 | - | 0 | 16 | 940_963 | -63 | 1052 | Zinc finger | C2H2-type 9 |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000468789 | - | 0 | 16 | 969_991 | -63 | 1052 | Zinc finger | C2H2-type 10 |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000472280 | - | 0 | 16 | 209_236 | -63 | 1053 | Zinc finger | C2H2-type 1 |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000472280 | - | 0 | 16 | 263_285 | -63 | 1053 | Zinc finger | C2H2-type 2 |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000472280 | - | 0 | 16 | 291_313 | -63 | 1053 | Zinc finger | C2H2-type 3 |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000472280 | - | 0 | 16 | 319_342 | -63 | 1053 | Zinc finger | C2H2-type 4 |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000472280 | - | 0 | 16 | 348_370 | -63 | 1053 | Zinc finger | C2H2-type 5 |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000472280 | - | 0 | 16 | 376_398 | -63 | 1053 | Zinc finger | C2H2-type 6 |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000472280 | - | 0 | 16 | 405_427 | -63 | 1053 | Zinc finger | C2H2-type 7%3B atypical |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000472280 | - | 0 | 16 | 912_934 | -63 | 1053 | Zinc finger | C2H2-type 8 |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000472280 | - | 0 | 16 | 940_963 | -63 | 1053 | Zinc finger | C2H2-type 9 |
Tgene | >MECOM | chr3:167742314 | chr3:168861620 | ENST00000472280 | - | 0 | 16 | 969_991 | -63 | 1053 | Zinc finger | C2H2-type 10 |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | >GOLIM4 | chr3:167742314 | chr3:168861620 | ENST00000470487 | - | 14 | 16 | 311_681 | 620 | 697 | Compositional bias | Note=Glu-rich |
Hgene | >GOLIM4 | chr3:167742314 | chr3:168861620 | ENST00000470487 | - | 14 | 16 | 34_696 | 620 | 697 | Topological domain | Lumenal |
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FusionGeneSequence for GOLIM4_MECOM |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_GOLIM4_ENST00000470487_chr3_167742314_-_MECOM_ENST00000264674_chr3_168861620_-_1736aa MGNGMCSRKQKRIFQTLLLLTVVFGFLYGAMLYYELQTQLRKAEAVALKYQQHQESLSAQLQVVYEHRSRLEKSLQKERLEHKKAKEDFL VYKLEAQETLNKGRQDSNSRYSALNVQHQMLKSQHEELKKQHSDLEEEHRKQGEDFSRTFNDHKQKYLQLQQEKEQELSKLKETVYNLRE ENRQLRKAHQDIHTQLQDVKQQHKNLLSEHEQLVVTLEDHKSALAAAQTQVAEYKQLKDTLNRIPSLRKPDPAEQQNVTQVAHSPQGYNT AREKPTREVQEVSRNNDVWQNHEAVPGRAEDTKLYAPTHKEAEFQAPPEPIQQEVERREPEEHQVEEEHRKALEEEEMEQVGQAEHLEEE HDPSPEEQDREWKEQHEQREAANLLEGHARAEVYPSAKPMIKFQSPYEEQLEQQRLAVQQVEEAQQLREHQEALHQQRLQGHLLRQQEQQ QQQVAREMALQRQAELEEGRPQHQEQLRQQAHYDAMDNDIVQGAEDQGIQGEEGAYERDNQHQDEAEGDPGNRHEPREQGPREADPESEA DRAAVEDINPADDPNNQGEDEFEEAEQVREENLPDENEEQKQSNQKQENTEVEEHLVMAGNPDQQEDNVDEQYQEEAEEEILDEFYNVKF CIDASQPDVGSWLKYIRFAGCYDQHNLVACQINDQIFYRVVADIAPGEELLLFMKSEDYPHETMAPDIHEERQYRCEDCDQLFESKAELA DHQKFPCSTPHSAFSMVEEDFQQKLESENDLQEIHTIQECKECDQVFPDLQSLEKHMLSHTEEREYKCDQCPKAFNWKSNLIRHQMSHDS GKHYECENCAKQVFTDPSNLQRHIRSQHVGARAHACPECGKTFATSSGLKQHKHIHSSVKPFICEVCHKSYTQFSNLCRHKRMHADCRTQ IKCKDCGQMFSTTSSLNKHRRFCEGKNHFAAGGFFGQGISLPGTPAMDKTSMVNMSHANPGLADYFGANRHPAGLTFPTAPGFSFSFPGL FPSGLYHRPPLIPASSPVKGLSSTEQTNKSQSPLMTHPQILPATQDILKALSKHPSVGDNKPVELQPERSSEERPFEKISDQSESSDLDD VSTPSGSDLETTSGSDLESDIESDKEKFKENGKMFKDKVSPLQNLASINNKKEYSNHSIFSPSLEEQTAVSGAVNDSIKAIASIAEKYFG STGLVGLQDKKVGALPYPSMFPLPFFPAFSQSMYPFPDRDLRSLPLKMEPQSPGEVKKLQKGSSESPFDLTTKRKDEKPLTPVPSKPPVT PATSQDQPLDLSMGSRSRASGTKLTEPRKNHVFGGKKGSNVESRPASDGSLQHARPTPFFMDPIYRVEKRKLTDPLEALKEKYLRPSPGF LFHPQFQLPDQRTWMSAIENMAEKLESFSALKPEASELLQSVPSMFNFRAPPNALPENLLRKGKERYTCRYCGKIFPRSANLTRHLRTHT GEQPYRCKYCDRSFSISSNLQRHVRNIHNKEKPFKCHLCDRCFGQQTNLDRHLKKHENGNMSGTATSSPHSELESTGAILDDKEDAYFTE IRNFIGNSNHGSQSPRNVEERMNGSHFKDEKALVTSQNSDLLDDEEVEDEVLLDEEDEDNDITGKTGKEPVTSNLHEGNPEDDYEETSAL EMSCKTSPVRYKEEEYKSGLSALDHIRHFTDSLKMRKMEDNQYSEAELSSFSTSHVPEELKQPLHRKSKSQAYAMMLSLSDKESLHSTSH >In-frame_GOLIM4_ENST00000309027_chr3_167742314_-_MECOM_ENST00000264674_chr3_168861620_-_1708aa MGNGMCSRKQKRIFQTLLLLTVVFGFLYGAMLYYELQTQLRKAEAVALKYQQHQESLSAQLQVVYEHRSRLEKSLQKERLEHKKAKEDFL VYKLEAQETLNKGRQDSNSRYSALNVQHQMLKSQHEELKKQHSDLEEEHRKQGEDFSRTFNDHKQKYLQLQQEKEQELSKLKETVYNLRE ENRQLRKAHQDIHTQLQDVKTQVAEYKQLKDTLNRIPSLRKPDPAEQQNVTQVAHSPQGYNTAREKPTREVQEVSRNNDVWQNHEAVPGR AEDTKLYAPTHKEAEFQAPPEPIQQEVERREPEEHQVEEEHRKALEEEEMEQVGQAEHLEEEHDPSPEEQDREWKEQHEQREAANLLEGH ARAEVYPSAKPMIKFQSPYEEQLEQQRLAVQQVEEAQQLREHQEALHQQRLQGHLLRQQEQQQQQVAREMALQRQAELEEGRPQHQEQLR QQAHYDAMDNDIVQGAEDQGIQGEEGAYERDNQHQDEAEGDPGNRHEPREQGPREADPESEADRAAVEDINPADDPNNQGEDEFEEAEQV REENLPDENEEQKQSNQKQENTEVEEHLVMAGNPDQQEDNVDEQYQEEAEEEILDEFYNVKFCIDASQPDVGSWLKYIRFAGCYDQHNLV ACQINDQIFYRVVADIAPGEELLLFMKSEDYPHETMAPDIHEERQYRCEDCDQLFESKAELADHQKFPCSTPHSAFSMVEEDFQQKLESE NDLQEIHTIQECKECDQVFPDLQSLEKHMLSHTEEREYKCDQCPKAFNWKSNLIRHQMSHDSGKHYECENCAKQVFTDPSNLQRHIRSQH VGARAHACPECGKTFATSSGLKQHKHIHSSVKPFICEVCHKSYTQFSNLCRHKRMHADCRTQIKCKDCGQMFSTTSSLNKHRRFCEGKNH FAAGGFFGQGISLPGTPAMDKTSMVNMSHANPGLADYFGANRHPAGLTFPTAPGFSFSFPGLFPSGLYHRPPLIPASSPVKGLSSTEQTN KSQSPLMTHPQILPATQDILKALSKHPSVGDNKPVELQPERSSEERPFEKISDQSESSDLDDVSTPSGSDLETTSGSDLESDIESDKEKF KENGKMFKDKVSPLQNLASINNKKEYSNHSIFSPSLEEQTAVSGAVNDSIKAIASIAEKYFGSTGLVGLQDKKVGALPYPSMFPLPFFPA FSQSMYPFPDRDLRSLPLKMEPQSPGEVKKLQKGSSESPFDLTTKRKDEKPLTPVPSKPPVTPATSQDQPLDLSMGSRSRASGTKLTEPR KNHVFGGKKGSNVESRPASDGSLQHARPTPFFMDPIYRVEKRKLTDPLEALKEKYLRPSPGFLFHPQFQLPDQRTWMSAIENMAEKLESF SALKPEASELLQSVPSMFNFRAPPNALPENLLRKGKERYTCRYCGKIFPRSANLTRHLRTHTGEQPYRCKYCDRSFSISSNLQRHVRNIH NKEKPFKCHLCDRCFGQQTNLDRHLKKHENGNMSGTATSSPHSELESTGAILDDKEDAYFTEIRNFIGNSNHGSQSPRNVEERMNGSHFK DEKALVTSQNSDLLDDEEVEDEVLLDEEDEDNDITGKTGKEPVTSNLHEGNPEDDYEETSALEMSCKTSPVRYKEEEYKSGLSALDHIRH |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_GOLIM4_ENST00000470487_chr3_167742314_-_MECOM_ENST00000264674_chr3_168861620_-_5208nt ATGGGAAACGGGATGTGCTCCCGAAAGCAGAAGCGGATTTTCCAGACGCTGCTGCTGCTGACCGTCGTGTTCGGCTTTCTCTACGGCGCG ATGCTCTACTACGAGCTGCAGACGCAGCTGCGGAAAGCCGAGGCGGTGGCGCTCAAGTACCAGCAGCACCAGGAGTCCCTCTCCGCCCAG TTACAAGTTGTATATGAACACAGATCAAGATTAGAGAAATCCTTGCAAAAAGAAAGACTTGAACATAAAAAAGCAAAGGAAGATTTTCTT GTTTATAAGTTAGAAGCACAAGAAACATTAAATAAAGGAAGGCAAGATTCCAATAGCAGATACAGTGCACTGAATGTCCAACATCAGATG TTGAAAAGCCAACACGAGGAGCTAAAGAAACAGCACAGTGACTTGGAAGAGGAACATCGCAAACAAGGGGAAGACTTCAGTAGAACATTT AATGACCATAAGCAAAAATACTTGCAGCTCCAGCAAGAAAAAGAACAAGAACTTTCTAAGCTAAAAGAGACTGTATACAATTTGAGAGAA GAGAATAGACAACTAAGGAAAGCACACCAAGACATACATACACAGCTTCAAGATGTCAAGCAACAGCATAAGAATTTACTCTCCGAGCAT GAACAACTTGTAGTGACTTTGGAAGACCACAAGAGTGCACTAGCTGCTGCACAGACTCAAGTTGCAGAATATAAACAACTGAAAGATACT CTGAATAGGATTCCAAGCCTTCGAAAACCTGATCCAGCAGAACAGCAAAATGTGACCCAGGTGGCACATTCTCCACAAGGTTACAACACA GCAAGGGAGAAGCCAACCCGAGAGGTGCAGGAGGTGTCTCGAAATAATGATGTGTGGCAGAACCATGAAGCAGTTCCTGGAAGAGCAGAA GACACAAAACTCTATGCTCCCACCCATAAGGAGGCAGAATTTCAGGCTCCCCCAGAGCCAATCCAACAAGAAGTGGAACGCAGAGAACCT GAGGAGCATCAGGTGGAAGAGGAGCACAGAAAGGCCCTGGAGGAGGAAGAAATGGAGCAGGTCGGGCAAGCAGAACATCTTGAGGAGGAA CACGATCCATCACCAGAGGAGCAGGATCGGGAGTGGAAAGAGCAGCATGAGCAACGAGAAGCAGCCAACCTCCTGGAAGGGCACGCGCGT GCTGAGGTGTACCCTTCAGCCAAGCCAATGATCAAATTCCAATCACCCTATGAGGAACAGTTGGAACAGCAGAGACTGGCAGTGCAGCAG GTGGAGGAGGCCCAGCAGCTGCGGGAACACCAGGAAGCTTTGCACCAGCAGAGGCTGCAGGGGCACTTACTACGGCAGCAGGAACAGCAG CAGCAGCAGGTGGCAAGAGAGATGGCCCTGCAGAGGCAGGCTGAGCTTGAGGAGGGCCGGCCGCAGCACCAGGAGCAGCTCCGGCAGCAA GCTCATTATGATGCTATGGATAATGATATCGTTCAGGGAGCAGAGGACCAGGGAATCCAAGGAGAGGAAGGAGCCTATGAAAGAGACAAC CAGCACCAAGATGAAGCAGAAGGAGATCCAGGTAATAGACATGAGCCTCGTGAACAAGGACCCCGAGAAGCCGACCCAGAATCTGAGGCA GATAGGGCAGCTGTAGAAGATATAAACCCAGCAGATGACCCTAATAATCAAGGTGAGGATGAATTTGAAGAAGCCGAGCAAGTGAGAGAA GAAAATTTGCCAGATGAAAATGAAGAGCAAAAACAAAGTAATCAAAAGCAAGAGAATACAGAAGTGGAGGAACATTTGGTGATGGCAGGA AATCCAGACCAGCAGGAGGACAATGTTGATGAACAGTACCAGGAAGAGGCAGAAGAGGAGATCTTAGACGAATTTTACAATGTGAAGTTC TGCATAGATGCCAGTCAACCAGATGTTGGAAGCTGGCTCAAGTACATTAGATTCGCTGGCTGTTATGATCAGCACAACCTTGTTGCATGC CAGATAAATGATCAGATATTCTATAGAGTAGTTGCAGACATTGCGCCGGGAGAGGAGCTTCTGCTGTTCATGAAGAGCGAAGACTATCCC CATGAAACTATGGCGCCGGATATCCACGAAGAACGGCAATATCGCTGCGAAGACTGTGACCAGCTCTTTGAATCTAAGGCTGAACTAGCA GATCACCAAAAGTTTCCATGCAGTACTCCTCACTCAGCATTTTCAATGGTTGAAGAGGACTTTCAGCAAAAACTCGAAAGCGAGAATGAT CTCCAAGAGATACACACGATCCAGGAGTGTAAGGAATGTGACCAAGTTTTTCCTGATTTGCAAAGCCTGGAGAAACACATGCTGTCACAT ACTGAAGAGAGGGAATACAAGTGTGATCAGTGTCCCAAGGCATTTAACTGGAAGTCCAATTTAATTCGCCACCAGATGTCACATGACAGT GGAAAGCACTATGAATGTGAAAACTGTGCCAAGCAGGTTTTCACGGACCCTAGCAACCTTCAGCGGCACATTCGCTCTCAGCATGTCGGT GCCCGGGCCCATGCATGCCCGGAGTGTGGCAAAACGTTTGCCACTTCGTCGGGCCTCAAACAACACAAGCACATCCACAGCAGTGTGAAG CCCTTTATCTGTGAGGTCTGCCATAAATCCTATACTCAGTTTTCAAACCTTTGCCGTCATAAGCGCATGCATGCTGATTGCAGAACCCAA ATCAAGTGCAAAGACTGTGGACAAATGTTCAGCACTACGTCTTCCTTAAATAAACACAGGAGGTTTTGTGAGGGCAAGAACCATTTTGCG GCAGGTGGATTTTTTGGCCAAGGCATTTCACTTCCTGGAACCCCAGCTATGGATAAAACGTCCATGGTTAATATGAGTCATGCCAACCCG GGCCTTGCTGACTATTTTGGCGCCAATAGGCATCCTGCTGGTCTTACCTTTCCAACAGCTCCTGGATTTTCTTTTAGCTTCCCTGGTCTG TTTCCTTCCGGCTTGTACCACAGGCCTCCTTTGATACCTGCTAGTTCTCCTGTTAAAGGACTATCAAGTACTGAACAGACAAACAAAAGT CAAAGTCCCCTCATGACACATCCTCAGATACTGCCAGCTACACAGGATATTTTGAAGGCACTATCTAAACACCCATCTGTAGGGGACAAT AAGCCAGTGGAGCTCCAGCCCGAGAGGTCCTCTGAAGAGAGGCCCTTTGAGAAAATCAGTGACCAGTCAGAGAGTAGTGACCTTGATGAT GTCAGTACACCAAGTGGCAGTGACCTGGAAACAACCTCGGGCTCTGATCTGGAAAGTGACATTGAAAGTGATAAAGAGAAATTTAAAGAA AATGGTAAAATGTTCAAAGACAAAGTAAGCCCTCTTCAGAATCTGGCTTCAATAAATAATAAGAAAGAATACAGCAATCATTCCATTTTC TCACCATCTTTAGAGGAGCAGACTGCGGTGTCAGGAGCTGTGAATGATTCTATAAAGGCTATTGCTTCTATTGCTGAAAAATACTTTGGT TCAACAGGACTGGTGGGGCTGCAAGACAAAAAAGTTGGAGCTTTACCTTACCCTTCCATGTTTCCCCTCCCATTTTTTCCAGCATTCTCT CAATCAATGTACCCATTTCCTGATAGAGACTTGAGATCGTTACCTTTGAAAATGGAACCCCAATCACCAGGTGAAGTAAAGAAACTGCAG AAGGGCAGCTCTGAGTCCCCCTTTGATCTCACCACTAAGCGAAAGGATGAGAAGCCCTTGACTCCAGTCCCCTCCAAGCCTCCAGTGACA CCTGCCACAAGCCAAGACCAGCCCCTGGATCTAAGTATGGGCAGTAGGAGTAGAGCCAGTGGGACAAAGCTGACTGAGCCTCGAAAAAAC CACGTGTTTGGGGGAAAAAAAGGAAGCAACGTCGAATCAAGACCTGCTTCAGATGGTTCCTTGCAGCATGCAAGACCCACTCCTTTCTTT ATGGACCCTATTTACAGAGTAGAGAAAAGAAAACTAACTGACCCACTTGAAGCTTTAAAAGAGAAATACTTGAGGCCTTCTCCAGGATTC TTGTTTCACCCACAATTCCAACTGCCTGATCAGAGAACTTGGATGTCAGCTATTGAAAACATGGCAGAAAAGCTAGAGAGCTTCAGTGCC CTGAAACCTGAGGCCAGTGAGCTCTTACAGTCAGTGCCCTCTATGTTCAACTTCAGGGCGCCTCCCAATGCCCTGCCAGAGAACCTTCTG CGGAAGGGAAAGGAGCGCTATACCTGCAGATACTGTGGCAAGATTTTTCCAAGGTCTGCAAACCTAACACGGCACTTGAGAACCCACACA GGAGAGCAGCCTTACAGATGCAAATACTGTGACAGATCATTTAGCATATCTTCTAACTTGCAAAGGCATGTTCGCAACATCCACAATAAA GAGAAGCCATTTAAGTGTCACTTATGTGATAGGTGTTTTGGTCAACAAACCAATTTAGACAGACACCTAAAGAAACATGAGAATGGGAAC ATGTCCGGTACAGCAACATCGTCGCCTCATTCTGAACTGGAAAGTACAGGTGCGATTCTGGATGACAAAGAAGATGCTTACTTCACAGAA ATTCGAAATTTCATTGGGAACAGCAACCATGGCAGCCAATCTCCCAGGAATGTGGAGGAGAGAATGAATGGCAGTCATTTTAAAGATGAA AAGGCTTTGGTGACCAGTCAAAATTCAGACTTGCTGGATGATGAAGAAGTTGAAGATGAGGTGTTGTTAGATGAGGAGGATGAAGACAAT GATATTACTGGAAAAACAGGAAAGGAACCAGTGACAAGTAATTTACATGAAGGAAACCCTGAGGATGACTATGAAGAAACCAGTGCCCTG GAGATGAGTTGCAAGACATCCCCAGTGAGGTATAAAGAGGAAGAATATAAAAGTGGACTTTCTGCTCTAGATCATATAAGGCACTTCACA GATAGCCTCAAAATGAGGAAAATGGAAGATAATCAATATTCTGAAGCTGAGCTGTCTTCTTTTAGTACTTCCCATGTGCCAGAGGAACTT AAGCAGCCGTTACACAGAAAGTCCAAATCGCAGGCATATGCTATGATGCTGTCACTGTCTGACAAGGAGTCCCTCCATTCTACATCCCAC >In-frame_GOLIM4_ENST00000309027_chr3_167742314_-_MECOM_ENST00000264674_chr3_168861620_-_5124nt ATGGGAAACGGGATGTGCTCCCGAAAGCAGAAGCGGATTTTCCAGACGCTGCTGCTGCTGACCGTCGTGTTCGGCTTTCTCTACGGCGCG ATGCTCTACTACGAGCTGCAGACGCAGCTGCGGAAAGCCGAGGCGGTGGCGCTCAAGTACCAGCAGCACCAGGAGTCCCTCTCCGCCCAG TTACAAGTTGTATATGAACACAGATCAAGATTAGAGAAATCCTTGCAAAAAGAAAGACTTGAACATAAAAAAGCAAAGGAAGATTTTCTT GTTTATAAGTTAGAAGCACAAGAAACATTAAATAAAGGAAGGCAAGATTCCAATAGCAGATACAGTGCACTGAATGTCCAACATCAGATG TTGAAAAGCCAACACGAGGAGCTAAAGAAACAGCACAGTGACTTGGAAGAGGAACATCGCAAACAAGGGGAAGACTTCAGTAGAACATTT AATGACCATAAGCAAAAATACTTGCAGCTCCAGCAAGAAAAAGAACAAGAACTTTCTAAGCTAAAAGAGACTGTATACAATTTGAGAGAA GAGAATAGACAACTAAGGAAAGCACACCAAGACATACATACACAGCTTCAAGATGTCAAGACTCAAGTTGCAGAATATAAACAACTGAAA GATACTCTGAATAGGATTCCAAGCCTTCGAAAACCTGATCCAGCAGAACAGCAAAATGTGACCCAGGTGGCACATTCTCCACAAGGTTAC AACACAGCAAGGGAGAAGCCAACCCGAGAGGTGCAGGAGGTGTCTCGAAATAATGATGTGTGGCAGAACCATGAAGCAGTTCCTGGAAGA GCAGAAGACACAAAACTCTATGCTCCCACCCATAAGGAGGCAGAATTTCAGGCTCCCCCAGAGCCAATCCAACAAGAAGTGGAACGCAGA GAACCTGAGGAGCATCAGGTGGAAGAGGAGCACAGAAAGGCCCTGGAGGAGGAAGAAATGGAGCAGGTCGGGCAAGCAGAACATCTTGAG GAGGAACACGATCCATCACCAGAGGAGCAGGATCGGGAGTGGAAAGAGCAGCATGAGCAACGAGAAGCAGCCAACCTCCTGGAAGGGCAC GCGCGTGCTGAGGTGTACCCTTCAGCCAAGCCAATGATCAAATTCCAATCACCCTATGAGGAACAGTTGGAACAGCAGAGACTGGCAGTG CAGCAGGTGGAGGAGGCCCAGCAGCTGCGGGAACACCAGGAAGCTTTGCACCAGCAGAGGCTGCAGGGGCACTTACTACGGCAGCAGGAA CAGCAGCAGCAGCAGGTGGCAAGAGAGATGGCCCTGCAGAGGCAGGCTGAGCTTGAGGAGGGCCGGCCGCAGCACCAGGAGCAGCTCCGG CAGCAAGCTCATTATGATGCTATGGATAATGATATCGTTCAGGGAGCAGAGGACCAGGGAATCCAAGGAGAGGAAGGAGCCTATGAAAGA GACAACCAGCACCAAGATGAAGCAGAAGGAGATCCAGGTAATAGACATGAGCCTCGTGAACAAGGACCCCGAGAAGCCGACCCAGAATCT GAGGCAGATAGGGCAGCTGTAGAAGATATAAACCCAGCAGATGACCCTAATAATCAAGGTGAGGATGAATTTGAAGAAGCCGAGCAAGTG AGAGAAGAAAATTTGCCAGATGAAAATGAAGAGCAAAAACAAAGTAATCAAAAGCAAGAGAATACAGAAGTGGAGGAACATTTGGTGATG GCAGGAAATCCAGACCAGCAGGAGGACAATGTTGATGAACAGTACCAGGAAGAGGCAGAAGAGGAGATCTTAGACGAATTTTACAATGTG AAGTTCTGCATAGATGCCAGTCAACCAGATGTTGGAAGCTGGCTCAAGTACATTAGATTCGCTGGCTGTTATGATCAGCACAACCTTGTT GCATGCCAGATAAATGATCAGATATTCTATAGAGTAGTTGCAGACATTGCGCCGGGAGAGGAGCTTCTGCTGTTCATGAAGAGCGAAGAC TATCCCCATGAAACTATGGCGCCGGATATCCACGAAGAACGGCAATATCGCTGCGAAGACTGTGACCAGCTCTTTGAATCTAAGGCTGAA CTAGCAGATCACCAAAAGTTTCCATGCAGTACTCCTCACTCAGCATTTTCAATGGTTGAAGAGGACTTTCAGCAAAAACTCGAAAGCGAG AATGATCTCCAAGAGATACACACGATCCAGGAGTGTAAGGAATGTGACCAAGTTTTTCCTGATTTGCAAAGCCTGGAGAAACACATGCTG TCACATACTGAAGAGAGGGAATACAAGTGTGATCAGTGTCCCAAGGCATTTAACTGGAAGTCCAATTTAATTCGCCACCAGATGTCACAT GACAGTGGAAAGCACTATGAATGTGAAAACTGTGCCAAGCAGGTTTTCACGGACCCTAGCAACCTTCAGCGGCACATTCGCTCTCAGCAT GTCGGTGCCCGGGCCCATGCATGCCCGGAGTGTGGCAAAACGTTTGCCACTTCGTCGGGCCTCAAACAACACAAGCACATCCACAGCAGT GTGAAGCCCTTTATCTGTGAGGTCTGCCATAAATCCTATACTCAGTTTTCAAACCTTTGCCGTCATAAGCGCATGCATGCTGATTGCAGA ACCCAAATCAAGTGCAAAGACTGTGGACAAATGTTCAGCACTACGTCTTCCTTAAATAAACACAGGAGGTTTTGTGAGGGCAAGAACCAT TTTGCGGCAGGTGGATTTTTTGGCCAAGGCATTTCACTTCCTGGAACCCCAGCTATGGATAAAACGTCCATGGTTAATATGAGTCATGCC AACCCGGGCCTTGCTGACTATTTTGGCGCCAATAGGCATCCTGCTGGTCTTACCTTTCCAACAGCTCCTGGATTTTCTTTTAGCTTCCCT GGTCTGTTTCCTTCCGGCTTGTACCACAGGCCTCCTTTGATACCTGCTAGTTCTCCTGTTAAAGGACTATCAAGTACTGAACAGACAAAC AAAAGTCAAAGTCCCCTCATGACACATCCTCAGATACTGCCAGCTACACAGGATATTTTGAAGGCACTATCTAAACACCCATCTGTAGGG GACAATAAGCCAGTGGAGCTCCAGCCCGAGAGGTCCTCTGAAGAGAGGCCCTTTGAGAAAATCAGTGACCAGTCAGAGAGTAGTGACCTT GATGATGTCAGTACACCAAGTGGCAGTGACCTGGAAACAACCTCGGGCTCTGATCTGGAAAGTGACATTGAAAGTGATAAAGAGAAATTT AAAGAAAATGGTAAAATGTTCAAAGACAAAGTAAGCCCTCTTCAGAATCTGGCTTCAATAAATAATAAGAAAGAATACAGCAATCATTCC ATTTTCTCACCATCTTTAGAGGAGCAGACTGCGGTGTCAGGAGCTGTGAATGATTCTATAAAGGCTATTGCTTCTATTGCTGAAAAATAC TTTGGTTCAACAGGACTGGTGGGGCTGCAAGACAAAAAAGTTGGAGCTTTACCTTACCCTTCCATGTTTCCCCTCCCATTTTTTCCAGCA TTCTCTCAATCAATGTACCCATTTCCTGATAGAGACTTGAGATCGTTACCTTTGAAAATGGAACCCCAATCACCAGGTGAAGTAAAGAAA CTGCAGAAGGGCAGCTCTGAGTCCCCCTTTGATCTCACCACTAAGCGAAAGGATGAGAAGCCCTTGACTCCAGTCCCCTCCAAGCCTCCA GTGACACCTGCCACAAGCCAAGACCAGCCCCTGGATCTAAGTATGGGCAGTAGGAGTAGAGCCAGTGGGACAAAGCTGACTGAGCCTCGA AAAAACCACGTGTTTGGGGGAAAAAAAGGAAGCAACGTCGAATCAAGACCTGCTTCAGATGGTTCCTTGCAGCATGCAAGACCCACTCCT TTCTTTATGGACCCTATTTACAGAGTAGAGAAAAGAAAACTAACTGACCCACTTGAAGCTTTAAAAGAGAAATACTTGAGGCCTTCTCCA GGATTCTTGTTTCACCCACAATTCCAACTGCCTGATCAGAGAACTTGGATGTCAGCTATTGAAAACATGGCAGAAAAGCTAGAGAGCTTC AGTGCCCTGAAACCTGAGGCCAGTGAGCTCTTACAGTCAGTGCCCTCTATGTTCAACTTCAGGGCGCCTCCCAATGCCCTGCCAGAGAAC CTTCTGCGGAAGGGAAAGGAGCGCTATACCTGCAGATACTGTGGCAAGATTTTTCCAAGGTCTGCAAACCTAACACGGCACTTGAGAACC CACACAGGAGAGCAGCCTTACAGATGCAAATACTGTGACAGATCATTTAGCATATCTTCTAACTTGCAAAGGCATGTTCGCAACATCCAC AATAAAGAGAAGCCATTTAAGTGTCACTTATGTGATAGGTGTTTTGGTCAACAAACCAATTTAGACAGACACCTAAAGAAACATGAGAAT GGGAACATGTCCGGTACAGCAACATCGTCGCCTCATTCTGAACTGGAAAGTACAGGTGCGATTCTGGATGACAAAGAAGATGCTTACTTC ACAGAAATTCGAAATTTCATTGGGAACAGCAACCATGGCAGCCAATCTCCCAGGAATGTGGAGGAGAGAATGAATGGCAGTCATTTTAAA GATGAAAAGGCTTTGGTGACCAGTCAAAATTCAGACTTGCTGGATGATGAAGAAGTTGAAGATGAGGTGTTGTTAGATGAGGAGGATGAA GACAATGATATTACTGGAAAAACAGGAAAGGAACCAGTGACAAGTAATTTACATGAAGGAAACCCTGAGGATGACTATGAAGAAACCAGT GCCCTGGAGATGAGTTGCAAGACATCCCCAGTGAGGTATAAAGAGGAAGAATATAAAAGTGGACTTTCTGCTCTAGATCATATAAGGCAC TTCACAGATAGCCTCAAAATGAGGAAAATGGAAGATAATCAATATTCTGAAGCTGAGCTGTCTTCTTTTAGTACTTCCCATGTGCCAGAG GAACTTAAGCAGCCGTTACACAGAAAGTCCAAATCGCAGGCATATGCTATGATGCTGTCACTGTCTGACAAGGAGTCCCTCCATTCTACA |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_GOLIM4_ENST00000470487_chr3_167742314_-_MECOM_ENST00000264674_chr3_168861620_-_7308nt AATGAGCAAGGAGGCCGAGTGGGACTTCCTCCCGGAATCCCGTTGGCCAGAATAGCCGGGCCGTGGGTGACACGTAAGTTGGGCAGGAGG TGGCGGGGCGGCAGAGGCACCAGCCGACCCGTCAGTGACACCGCTGTGCCGTCCCCAAAACCAGCCGAGACAGCTGGCCCCCACCCTTCC ACCCATTGGGCAGGCCGCACGGGGGCGCGGCCCGGAGTCCTGGTCCCTTTGTTGGGCGCGCACCCCCTCCCTTAGGTGGCAACAAAGTCG TGCAGTGGGAGCCGCCGCGATAGGGCGGGGAGTGGCCAGGGCGGGACTCCAAGAACTGCCCGGGGGCAGCGGGGCCAAAAAGTGGGAAGA AGGAAAAAAGGCAGGAGGCATCTGGGGACAGGCGCGAGGGCAGCCGGCTCTGAAGTATGCGGAGGGCCTCCTCCCGGCCCCGGGCATTCG CGGAGAACGAGCCTCGCAGAAGTTTGGCTGCAGCTGCCCGGGCGGCGTCGATGGCTGCGCGCCCCGCGCCGCGCGGGGGCTGAGCGGGCG CCACTTCCCCTCCGGGCCGGCTTTTGTGTCTGGCATCTCCTCCTCATGCTGCGTCTGGCCACCTACTGCGGCGGCCGCTGCTGAGACGCT CGCTCGGACCAAGGGGAGGAGACGGCGGGGGCGGCCGCGGCTTTGGGTCCAGGCGGGACTATGGGAAACGGGATGTGCTCCCGAAAGCAG AAGCGGATTTTCCAGACGCTGCTGCTGCTGACCGTCGTGTTCGGCTTTCTCTACGGCGCGATGCTCTACTACGAGCTGCAGACGCAGCTG CGGAAAGCCGAGGCGGTGGCGCTCAAGTACCAGCAGCACCAGGAGTCCCTCTCCGCCCAGTTACAAGTTGTATATGAACACAGATCAAGA TTAGAGAAATCCTTGCAAAAAGAAAGACTTGAACATAAAAAAGCAAAGGAAGATTTTCTTGTTTATAAGTTAGAAGCACAAGAAACATTA AATAAAGGAAGGCAAGATTCCAATAGCAGATACAGTGCACTGAATGTCCAACATCAGATGTTGAAAAGCCAACACGAGGAGCTAAAGAAA CAGCACAGTGACTTGGAAGAGGAACATCGCAAACAAGGGGAAGACTTCAGTAGAACATTTAATGACCATAAGCAAAAATACTTGCAGCTC CAGCAAGAAAAAGAACAAGAACTTTCTAAGCTAAAAGAGACTGTATACAATTTGAGAGAAGAGAATAGACAACTAAGGAAAGCACACCAA GACATACATACACAGCTTCAAGATGTCAAGCAACAGCATAAGAATTTACTCTCCGAGCATGAACAACTTGTAGTGACTTTGGAAGACCAC AAGAGTGCACTAGCTGCTGCACAGACTCAAGTTGCAGAATATAAACAACTGAAAGATACTCTGAATAGGATTCCAAGCCTTCGAAAACCT GATCCAGCAGAACAGCAAAATGTGACCCAGGTGGCACATTCTCCACAAGGTTACAACACAGCAAGGGAGAAGCCAACCCGAGAGGTGCAG GAGGTGTCTCGAAATAATGATGTGTGGCAGAACCATGAAGCAGTTCCTGGAAGAGCAGAAGACACAAAACTCTATGCTCCCACCCATAAG GAGGCAGAATTTCAGGCTCCCCCAGAGCCAATCCAACAAGAAGTGGAACGCAGAGAACCTGAGGAGCATCAGGTGGAAGAGGAGCACAGA AAGGCCCTGGAGGAGGAAGAAATGGAGCAGGTCGGGCAAGCAGAACATCTTGAGGAGGAACACGATCCATCACCAGAGGAGCAGGATCGG GAGTGGAAAGAGCAGCATGAGCAACGAGAAGCAGCCAACCTCCTGGAAGGGCACGCGCGTGCTGAGGTGTACCCTTCAGCCAAGCCAATG ATCAAATTCCAATCACCCTATGAGGAACAGTTGGAACAGCAGAGACTGGCAGTGCAGCAGGTGGAGGAGGCCCAGCAGCTGCGGGAACAC CAGGAAGCTTTGCACCAGCAGAGGCTGCAGGGGCACTTACTACGGCAGCAGGAACAGCAGCAGCAGCAGGTGGCAAGAGAGATGGCCCTG CAGAGGCAGGCTGAGCTTGAGGAGGGCCGGCCGCAGCACCAGGAGCAGCTCCGGCAGCAAGCTCATTATGATGCTATGGATAATGATATC GTTCAGGGAGCAGAGGACCAGGGAATCCAAGGAGAGGAAGGAGCCTATGAAAGAGACAACCAGCACCAAGATGAAGCAGAAGGAGATCCA GGTAATAGACATGAGCCTCGTGAACAAGGACCCCGAGAAGCCGACCCAGAATCTGAGGCAGATAGGGCAGCTGTAGAAGATATAAACCCA GCAGATGACCCTAATAATCAAGGTGAGGATGAATTTGAAGAAGCCGAGCAAGTGAGAGAAGAAAATTTGCCAGATGAAAATGAAGAGCAA AAACAAAGTAATCAAAAGCAAGAGAATACAGAAGTGGAGGAACATTTGGTGATGGCAGGAAATCCAGACCAGCAGGAGGACAATGTTGAT GAACAGTACCAGGAAGAGGCAGAAGAGGAGATCTTAGACGAATTTTACAATGTGAAGTTCTGCATAGATGCCAGTCAACCAGATGTTGGA AGCTGGCTCAAGTACATTAGATTCGCTGGCTGTTATGATCAGCACAACCTTGTTGCATGCCAGATAAATGATCAGATATTCTATAGAGTA GTTGCAGACATTGCGCCGGGAGAGGAGCTTCTGCTGTTCATGAAGAGCGAAGACTATCCCCATGAAACTATGGCGCCGGATATCCACGAA GAACGGCAATATCGCTGCGAAGACTGTGACCAGCTCTTTGAATCTAAGGCTGAACTAGCAGATCACCAAAAGTTTCCATGCAGTACTCCT CACTCAGCATTTTCAATGGTTGAAGAGGACTTTCAGCAAAAACTCGAAAGCGAGAATGATCTCCAAGAGATACACACGATCCAGGAGTGT AAGGAATGTGACCAAGTTTTTCCTGATTTGCAAAGCCTGGAGAAACACATGCTGTCACATACTGAAGAGAGGGAATACAAGTGTGATCAG TGTCCCAAGGCATTTAACTGGAAGTCCAATTTAATTCGCCACCAGATGTCACATGACAGTGGAAAGCACTATGAATGTGAAAACTGTGCC AAGCAGGTTTTCACGGACCCTAGCAACCTTCAGCGGCACATTCGCTCTCAGCATGTCGGTGCCCGGGCCCATGCATGCCCGGAGTGTGGC AAAACGTTTGCCACTTCGTCGGGCCTCAAACAACACAAGCACATCCACAGCAGTGTGAAGCCCTTTATCTGTGAGGTCTGCCATAAATCC TATACTCAGTTTTCAAACCTTTGCCGTCATAAGCGCATGCATGCTGATTGCAGAACCCAAATCAAGTGCAAAGACTGTGGACAAATGTTC AGCACTACGTCTTCCTTAAATAAACACAGGAGGTTTTGTGAGGGCAAGAACCATTTTGCGGCAGGTGGATTTTTTGGCCAAGGCATTTCA CTTCCTGGAACCCCAGCTATGGATAAAACGTCCATGGTTAATATGAGTCATGCCAACCCGGGCCTTGCTGACTATTTTGGCGCCAATAGG CATCCTGCTGGTCTTACCTTTCCAACAGCTCCTGGATTTTCTTTTAGCTTCCCTGGTCTGTTTCCTTCCGGCTTGTACCACAGGCCTCCT TTGATACCTGCTAGTTCTCCTGTTAAAGGACTATCAAGTACTGAACAGACAAACAAAAGTCAAAGTCCCCTCATGACACATCCTCAGATA CTGCCAGCTACACAGGATATTTTGAAGGCACTATCTAAACACCCATCTGTAGGGGACAATAAGCCAGTGGAGCTCCAGCCCGAGAGGTCC TCTGAAGAGAGGCCCTTTGAGAAAATCAGTGACCAGTCAGAGAGTAGTGACCTTGATGATGTCAGTACACCAAGTGGCAGTGACCTGGAA ACAACCTCGGGCTCTGATCTGGAAAGTGACATTGAAAGTGATAAAGAGAAATTTAAAGAAAATGGTAAAATGTTCAAAGACAAAGTAAGC CCTCTTCAGAATCTGGCTTCAATAAATAATAAGAAAGAATACAGCAATCATTCCATTTTCTCACCATCTTTAGAGGAGCAGACTGCGGTG TCAGGAGCTGTGAATGATTCTATAAAGGCTATTGCTTCTATTGCTGAAAAATACTTTGGTTCAACAGGACTGGTGGGGCTGCAAGACAAA AAAGTTGGAGCTTTACCTTACCCTTCCATGTTTCCCCTCCCATTTTTTCCAGCATTCTCTCAATCAATGTACCCATTTCCTGATAGAGAC TTGAGATCGTTACCTTTGAAAATGGAACCCCAATCACCAGGTGAAGTAAAGAAACTGCAGAAGGGCAGCTCTGAGTCCCCCTTTGATCTC ACCACTAAGCGAAAGGATGAGAAGCCCTTGACTCCAGTCCCCTCCAAGCCTCCAGTGACACCTGCCACAAGCCAAGACCAGCCCCTGGAT CTAAGTATGGGCAGTAGGAGTAGAGCCAGTGGGACAAAGCTGACTGAGCCTCGAAAAAACCACGTGTTTGGGGGAAAAAAAGGAAGCAAC GTCGAATCAAGACCTGCTTCAGATGGTTCCTTGCAGCATGCAAGACCCACTCCTTTCTTTATGGACCCTATTTACAGAGTAGAGAAAAGA AAACTAACTGACCCACTTGAAGCTTTAAAAGAGAAATACTTGAGGCCTTCTCCAGGATTCTTGTTTCACCCACAATTCCAACTGCCTGAT CAGAGAACTTGGATGTCAGCTATTGAAAACATGGCAGAAAAGCTAGAGAGCTTCAGTGCCCTGAAACCTGAGGCCAGTGAGCTCTTACAG TCAGTGCCCTCTATGTTCAACTTCAGGGCGCCTCCCAATGCCCTGCCAGAGAACCTTCTGCGGAAGGGAAAGGAGCGCTATACCTGCAGA TACTGTGGCAAGATTTTTCCAAGGTCTGCAAACCTAACACGGCACTTGAGAACCCACACAGGAGAGCAGCCTTACAGATGCAAATACTGT GACAGATCATTTAGCATATCTTCTAACTTGCAAAGGCATGTTCGCAACATCCACAATAAAGAGAAGCCATTTAAGTGTCACTTATGTGAT AGGTGTTTTGGTCAACAAACCAATTTAGACAGACACCTAAAGAAACATGAGAATGGGAACATGTCCGGTACAGCAACATCGTCGCCTCAT TCTGAACTGGAAAGTACAGGTGCGATTCTGGATGACAAAGAAGATGCTTACTTCACAGAAATTCGAAATTTCATTGGGAACAGCAACCAT GGCAGCCAATCTCCCAGGAATGTGGAGGAGAGAATGAATGGCAGTCATTTTAAAGATGAAAAGGCTTTGGTGACCAGTCAAAATTCAGAC TTGCTGGATGATGAAGAAGTTGAAGATGAGGTGTTGTTAGATGAGGAGGATGAAGACAATGATATTACTGGAAAAACAGGAAAGGAACCA GTGACAAGTAATTTACATGAAGGAAACCCTGAGGATGACTATGAAGAAACCAGTGCCCTGGAGATGAGTTGCAAGACATCCCCAGTGAGG TATAAAGAGGAAGAATATAAAAGTGGACTTTCTGCTCTAGATCATATAAGGCACTTCACAGATAGCCTCAAAATGAGGAAAATGGAAGAT AATCAATATTCTGAAGCTGAGCTGTCTTCTTTTAGTACTTCCCATGTGCCAGAGGAACTTAAGCAGCCGTTACACAGAAAGTCCAAATCG CAGGCATATGCTATGATGCTGTCACTGTCTGACAAGGAGTCCCTCCATTCTACATCCCACAGTTCTTCCAACGTGTGGCACAGTATGGCC AGGGCTGCGGCGGAATCCAGTGCTATCCAGTCCATAAGCCACGTATGACGTTATCAAGGTTGACCAGAGTGGGACCAAGTCCAACAGTAG CATGGCTCTTTCATATAGGACTATTTACAAGACTGCTGAGCAGAATGCCTTATAAACCTGCAGGGTCACTCATCTAAAGTCTAGTGACCT TAAACTGAATGATTTAAAAAAGAAAAGAAAGAAAAAAGAAACTATTTATTCTCGATATTTTGTTTTGCACAGCAAAGGCAGCTGCTGACT TCTGGAAGATCAATCAATGCGACTTAAAGTGATTCAGTGAAAACAAAAAACTTGGTGGGCTGAAGGCATCTTCCAGTTTACCCCACCTTA GGGTATGGGTGGGTGAGAAGGGCAGTTGAGATGGCAGCATTGATATGAATGAACACTCCATAGAAACTGAATTCTCTTTTGTACAAGATC ACCTGACATGATTGGGAACAGTTGCTTTTAATTACAGATTTAATTTTTTTCTTCGTTAAAGTTTTATGTAATTTAACCCTTTGAAGACAG AAGTAGTTGGATGAAATGCACAGTCAATTATTATAGAAACTGATAACAGGGAGTACTTGTTCCCCCTTTTGCCTTCTTAAGTACATTGTT TAAAACTAGGGAAAAAGGGTATGTGTATATTGTAAACTATGGATGTTAACACTCAAAGAGGTTAAGTCAGTGAAGTAACCTATTCATCAC CAGTACCGCTGTACCACTAATAAATTGTTTGCCAAATCCTTGTAATAACATCTTAATTTTAGACAATCATGTCACTGTTTTTAATGTTTA TTTTTTTGTGTGTGTTGCGTGTATCATGTATTTATTTGTTGGCAAACTATTGTTTGTTGATTAAAATAGCACTGTTCCAGTCAGCCACTA CTTTATGACGTCTGAGGCACACCCCTTTCCGAATTTCAAGGACCAAGGTGACCCGACCTGTGTATGAGAGTGCCAAATGGTGTTTGGCTT TTCTTAACATTCCTTTTTGTTTGTTTGTTTTGTTTTCCTTCTTAATGAACTAAATACGAATAGATGCAACTTAGTTTTTGTAATACTGAA ATCGATTCAATTGTATAAACGATTATAATTTCTTTCATGGAAGCATGATTCTTCTGATTAAAAACTGTACTCCATATTTTATGCTGGTTG TCTGCAAGCTTGTGCGATGTTATGTTCATGTTAATCCTATTTGTAAAATGAAGTGTTCCCAACCTTATGTTAAAAGAGAGAAGTAAATAA CAGACTGTATTCAGTTATTTTGCCCTTTATTGAGGAACCAGATTTGTTTTCTTTTTGTTTGTAATCTCATTTTGAAATAATCAGCAAGTT GAGGTACTTTCTTCAAATGCTTTGTACAATATAAACTGTTATGCCTTTCAGTGCATTACTATGGGAGGAGCAACTAAAAAATAAAGACTT >In-frame_GOLIM4_ENST00000309027_chr3_167742314_-_MECOM_ENST00000264674_chr3_168861620_-_6593nt GCTCGGACCAAGGGGAGGAGACGGCGGGGGCGGCCGCGGCTTTGGGTCCAGGCGGGACTATGGGAAACGGGATGTGCTCCCGAAAGCAGA AGCGGATTTTCCAGACGCTGCTGCTGCTGACCGTCGTGTTCGGCTTTCTCTACGGCGCGATGCTCTACTACGAGCTGCAGACGCAGCTGC GGAAAGCCGAGGCGGTGGCGCTCAAGTACCAGCAGCACCAGGAGTCCCTCTCCGCCCAGTTACAAGTTGTATATGAACACAGATCAAGAT TAGAGAAATCCTTGCAAAAAGAAAGACTTGAACATAAAAAAGCAAAGGAAGATTTTCTTGTTTATAAGTTAGAAGCACAAGAAACATTAA ATAAAGGAAGGCAAGATTCCAATAGCAGATACAGTGCACTGAATGTCCAACATCAGATGTTGAAAAGCCAACACGAGGAGCTAAAGAAAC AGCACAGTGACTTGGAAGAGGAACATCGCAAACAAGGGGAAGACTTCAGTAGAACATTTAATGACCATAAGCAAAAATACTTGCAGCTCC AGCAAGAAAAAGAACAAGAACTTTCTAAGCTAAAAGAGACTGTATACAATTTGAGAGAAGAGAATAGACAACTAAGGAAAGCACACCAAG ACATACATACACAGCTTCAAGATGTCAAGACTCAAGTTGCAGAATATAAACAACTGAAAGATACTCTGAATAGGATTCCAAGCCTTCGAA AACCTGATCCAGCAGAACAGCAAAATGTGACCCAGGTGGCACATTCTCCACAAGGTTACAACACAGCAAGGGAGAAGCCAACCCGAGAGG TGCAGGAGGTGTCTCGAAATAATGATGTGTGGCAGAACCATGAAGCAGTTCCTGGAAGAGCAGAAGACACAAAACTCTATGCTCCCACCC ATAAGGAGGCAGAATTTCAGGCTCCCCCAGAGCCAATCCAACAAGAAGTGGAACGCAGAGAACCTGAGGAGCATCAGGTGGAAGAGGAGC ACAGAAAGGCCCTGGAGGAGGAAGAAATGGAGCAGGTCGGGCAAGCAGAACATCTTGAGGAGGAACACGATCCATCACCAGAGGAGCAGG ATCGGGAGTGGAAAGAGCAGCATGAGCAACGAGAAGCAGCCAACCTCCTGGAAGGGCACGCGCGTGCTGAGGTGTACCCTTCAGCCAAGC CAATGATCAAATTCCAATCACCCTATGAGGAACAGTTGGAACAGCAGAGACTGGCAGTGCAGCAGGTGGAGGAGGCCCAGCAGCTGCGGG AACACCAGGAAGCTTTGCACCAGCAGAGGCTGCAGGGGCACTTACTACGGCAGCAGGAACAGCAGCAGCAGCAGGTGGCAAGAGAGATGG CCCTGCAGAGGCAGGCTGAGCTTGAGGAGGGCCGGCCGCAGCACCAGGAGCAGCTCCGGCAGCAAGCTCATTATGATGCTATGGATAATG ATATCGTTCAGGGAGCAGAGGACCAGGGAATCCAAGGAGAGGAAGGAGCCTATGAAAGAGACAACCAGCACCAAGATGAAGCAGAAGGAG ATCCAGGTAATAGACATGAGCCTCGTGAACAAGGACCCCGAGAAGCCGACCCAGAATCTGAGGCAGATAGGGCAGCTGTAGAAGATATAA ACCCAGCAGATGACCCTAATAATCAAGGTGAGGATGAATTTGAAGAAGCCGAGCAAGTGAGAGAAGAAAATTTGCCAGATGAAAATGAAG AGCAAAAACAAAGTAATCAAAAGCAAGAGAATACAGAAGTGGAGGAACATTTGGTGATGGCAGGAAATCCAGACCAGCAGGAGGACAATG TTGATGAACAGTACCAGGAAGAGGCAGAAGAGGAGATCTTAGACGAATTTTACAATGTGAAGTTCTGCATAGATGCCAGTCAACCAGATG TTGGAAGCTGGCTCAAGTACATTAGATTCGCTGGCTGTTATGATCAGCACAACCTTGTTGCATGCCAGATAAATGATCAGATATTCTATA GAGTAGTTGCAGACATTGCGCCGGGAGAGGAGCTTCTGCTGTTCATGAAGAGCGAAGACTATCCCCATGAAACTATGGCGCCGGATATCC ACGAAGAACGGCAATATCGCTGCGAAGACTGTGACCAGCTCTTTGAATCTAAGGCTGAACTAGCAGATCACCAAAAGTTTCCATGCAGTA CTCCTCACTCAGCATTTTCAATGGTTGAAGAGGACTTTCAGCAAAAACTCGAAAGCGAGAATGATCTCCAAGAGATACACACGATCCAGG AGTGTAAGGAATGTGACCAAGTTTTTCCTGATTTGCAAAGCCTGGAGAAACACATGCTGTCACATACTGAAGAGAGGGAATACAAGTGTG ATCAGTGTCCCAAGGCATTTAACTGGAAGTCCAATTTAATTCGCCACCAGATGTCACATGACAGTGGAAAGCACTATGAATGTGAAAACT GTGCCAAGCAGGTTTTCACGGACCCTAGCAACCTTCAGCGGCACATTCGCTCTCAGCATGTCGGTGCCCGGGCCCATGCATGCCCGGAGT GTGGCAAAACGTTTGCCACTTCGTCGGGCCTCAAACAACACAAGCACATCCACAGCAGTGTGAAGCCCTTTATCTGTGAGGTCTGCCATA AATCCTATACTCAGTTTTCAAACCTTTGCCGTCATAAGCGCATGCATGCTGATTGCAGAACCCAAATCAAGTGCAAAGACTGTGGACAAA TGTTCAGCACTACGTCTTCCTTAAATAAACACAGGAGGTTTTGTGAGGGCAAGAACCATTTTGCGGCAGGTGGATTTTTTGGCCAAGGCA TTTCACTTCCTGGAACCCCAGCTATGGATAAAACGTCCATGGTTAATATGAGTCATGCCAACCCGGGCCTTGCTGACTATTTTGGCGCCA ATAGGCATCCTGCTGGTCTTACCTTTCCAACAGCTCCTGGATTTTCTTTTAGCTTCCCTGGTCTGTTTCCTTCCGGCTTGTACCACAGGC CTCCTTTGATACCTGCTAGTTCTCCTGTTAAAGGACTATCAAGTACTGAACAGACAAACAAAAGTCAAAGTCCCCTCATGACACATCCTC AGATACTGCCAGCTACACAGGATATTTTGAAGGCACTATCTAAACACCCATCTGTAGGGGACAATAAGCCAGTGGAGCTCCAGCCCGAGA GGTCCTCTGAAGAGAGGCCCTTTGAGAAAATCAGTGACCAGTCAGAGAGTAGTGACCTTGATGATGTCAGTACACCAAGTGGCAGTGACC TGGAAACAACCTCGGGCTCTGATCTGGAAAGTGACATTGAAAGTGATAAAGAGAAATTTAAAGAAAATGGTAAAATGTTCAAAGACAAAG TAAGCCCTCTTCAGAATCTGGCTTCAATAAATAATAAGAAAGAATACAGCAATCATTCCATTTTCTCACCATCTTTAGAGGAGCAGACTG CGGTGTCAGGAGCTGTGAATGATTCTATAAAGGCTATTGCTTCTATTGCTGAAAAATACTTTGGTTCAACAGGACTGGTGGGGCTGCAAG ACAAAAAAGTTGGAGCTTTACCTTACCCTTCCATGTTTCCCCTCCCATTTTTTCCAGCATTCTCTCAATCAATGTACCCATTTCCTGATA GAGACTTGAGATCGTTACCTTTGAAAATGGAACCCCAATCACCAGGTGAAGTAAAGAAACTGCAGAAGGGCAGCTCTGAGTCCCCCTTTG ATCTCACCACTAAGCGAAAGGATGAGAAGCCCTTGACTCCAGTCCCCTCCAAGCCTCCAGTGACACCTGCCACAAGCCAAGACCAGCCCC TGGATCTAAGTATGGGCAGTAGGAGTAGAGCCAGTGGGACAAAGCTGACTGAGCCTCGAAAAAACCACGTGTTTGGGGGAAAAAAAGGAA GCAACGTCGAATCAAGACCTGCTTCAGATGGTTCCTTGCAGCATGCAAGACCCACTCCTTTCTTTATGGACCCTATTTACAGAGTAGAGA AAAGAAAACTAACTGACCCACTTGAAGCTTTAAAAGAGAAATACTTGAGGCCTTCTCCAGGATTCTTGTTTCACCCACAATTCCAACTGC CTGATCAGAGAACTTGGATGTCAGCTATTGAAAACATGGCAGAAAAGCTAGAGAGCTTCAGTGCCCTGAAACCTGAGGCCAGTGAGCTCT TACAGTCAGTGCCCTCTATGTTCAACTTCAGGGCGCCTCCCAATGCCCTGCCAGAGAACCTTCTGCGGAAGGGAAAGGAGCGCTATACCT GCAGATACTGTGGCAAGATTTTTCCAAGGTCTGCAAACCTAACACGGCACTTGAGAACCCACACAGGAGAGCAGCCTTACAGATGCAAAT ACTGTGACAGATCATTTAGCATATCTTCTAACTTGCAAAGGCATGTTCGCAACATCCACAATAAAGAGAAGCCATTTAAGTGTCACTTAT GTGATAGGTGTTTTGGTCAACAAACCAATTTAGACAGACACCTAAAGAAACATGAGAATGGGAACATGTCCGGTACAGCAACATCGTCGC CTCATTCTGAACTGGAAAGTACAGGTGCGATTCTGGATGACAAAGAAGATGCTTACTTCACAGAAATTCGAAATTTCATTGGGAACAGCA ACCATGGCAGCCAATCTCCCAGGAATGTGGAGGAGAGAATGAATGGCAGTCATTTTAAAGATGAAAAGGCTTTGGTGACCAGTCAAAATT CAGACTTGCTGGATGATGAAGAAGTTGAAGATGAGGTGTTGTTAGATGAGGAGGATGAAGACAATGATATTACTGGAAAAACAGGAAAGG AACCAGTGACAAGTAATTTACATGAAGGAAACCCTGAGGATGACTATGAAGAAACCAGTGCCCTGGAGATGAGTTGCAAGACATCCCCAG TGAGGTATAAAGAGGAAGAATATAAAAGTGGACTTTCTGCTCTAGATCATATAAGGCACTTCACAGATAGCCTCAAAATGAGGAAAATGG AAGATAATCAATATTCTGAAGCTGAGCTGTCTTCTTTTAGTACTTCCCATGTGCCAGAGGAACTTAAGCAGCCGTTACACAGAAAGTCCA AATCGCAGGCATATGCTATGATGCTGTCACTGTCTGACAAGGAGTCCCTCCATTCTACATCCCACAGTTCTTCCAACGTGTGGCACAGTA TGGCCAGGGCTGCGGCGGAATCCAGTGCTATCCAGTCCATAAGCCACGTATGACGTTATCAAGGTTGACCAGAGTGGGACCAAGTCCAAC AGTAGCATGGCTCTTTCATATAGGACTATTTACAAGACTGCTGAGCAGAATGCCTTATAAACCTGCAGGGTCACTCATCTAAAGTCTAGT GACCTTAAACTGAATGATTTAAAAAAGAAAAGAAAGAAAAAAGAAACTATTTATTCTCGATATTTTGTTTTGCACAGCAAAGGCAGCTGC TGACTTCTGGAAGATCAATCAATGCGACTTAAAGTGATTCAGTGAAAACAAAAAACTTGGTGGGCTGAAGGCATCTTCCAGTTTACCCCA CCTTAGGGTATGGGTGGGTGAGAAGGGCAGTTGAGATGGCAGCATTGATATGAATGAACACTCCATAGAAACTGAATTCTCTTTTGTACA AGATCACCTGACATGATTGGGAACAGTTGCTTTTAATTACAGATTTAATTTTTTTCTTCGTTAAAGTTTTATGTAATTTAACCCTTTGAA GACAGAAGTAGTTGGATGAAATGCACAGTCAATTATTATAGAAACTGATAACAGGGAGTACTTGTTCCCCCTTTTGCCTTCTTAAGTACA TTGTTTAAAACTAGGGAAAAAGGGTATGTGTATATTGTAAACTATGGATGTTAACACTCAAAGAGGTTAAGTCAGTGAAGTAACCTATTC ATCACCAGTACCGCTGTACCACTAATAAATTGTTTGCCAAATCCTTGTAATAACATCTTAATTTTAGACAATCATGTCACTGTTTTTAAT GTTTATTTTTTTGTGTGTGTTGCGTGTATCATGTATTTATTTGTTGGCAAACTATTGTTTGTTGATTAAAATAGCACTGTTCCAGTCAGC CACTACTTTATGACGTCTGAGGCACACCCCTTTCCGAATTTCAAGGACCAAGGTGACCCGACCTGTGTATGAGAGTGCCAAATGGTGTTT GGCTTTTCTTAACATTCCTTTTTGTTTGTTTGTTTTGTTTTCCTTCTTAATGAACTAAATACGAATAGATGCAACTTAGTTTTTGTAATA CTGAAATCGATTCAATTGTATAAACGATTATAATTTCTTTCATGGAAGCATGATTCTTCTGATTAAAAACTGTACTCCATATTTTATGCT GGTTGTCTGCAAGCTTGTGCGATGTTATGTTCATGTTAATCCTATTTGTAAAATGAAGTGTTCCCAACCTTATGTTAAAAGAGAGAAGTA AATAACAGACTGTATTCAGTTATTTTGCCCTTTATTGAGGAACCAGATTTGTTTTCTTTTTGTTTGTAATCTCATTTTGAAATAATCAGC AAGTTGAGGTACTTTCTTCAAATGCTTTGTACAATATAAACTGTTATGCCTTTCAGTGCATTACTATGGGAGGAGCAACTAAAAAATAAA |
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FusionGenePPI for GOLIM4_MECOM |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
GOLIM4 | ELAVL1, TXN2, DDX5, FUS, HLA-DPA1, SPACA1, SYNE4, B3GAT3, HAUS7, SLC39A4, POMK, NTRK1, CDC42, EPHA2, KRAS, PTPN1, IQGAP1, VAPA, ATP6AP2, FGFR1OP, AP4S1, AP4E1, GOLT1B, CCDC132, PARD6B, MMGT1, PTPN2, PTPN4, TRDN, DCAF12, PTPRU, CD79B, ATP2B2, CSGALNACT2, UST, RAET1E, KCNS3, GDPD5, BATF3, FUT1, MRAP2, FCGRT, PTPRO | MECOM | HDAC1, CTBP1, HDAC4, CREBBP, KAT2B, SMAD3, MBD3, SUV39H1, EHMT2, SMAD1, SMAD2, SMAD4, SIRT1, ELAVL1, SOX2, PIAS4, PRMT1, UBE2I, SPDEF, NLRP14, PIK3R3, RABGAP1L, MED23, HIC1, FOXJ2, ERMAP, L3MBTL1 |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
Tgene | MECOM | chr3:167742314 | chr3:168861620 | ENST00000264674 | - | 1 | 17 | 189_440 | 1 | 1117 | MAPK9%2C SMAD3 and probably SUV39H1 |
Tgene | MECOM | chr3:167742314 | chr3:168861620 | ENST00000392736 | - | 0 | 16 | 189_440 | -63 | 1052 | MAPK9%2C SMAD3 and probably SUV39H1 |
Tgene | MECOM | chr3:167742314 | chr3:168861620 | ENST00000433243 | - | 1 | 17 | 189_440 | -63 | 1053 | MAPK9%2C SMAD3 and probably SUV39H1 |
Tgene | MECOM | chr3:167742314 | chr3:168861620 | ENST00000464456 | - | 0 | 15 | 189_440 | -63 | 1043 | MAPK9%2C SMAD3 and probably SUV39H1 |
Tgene | MECOM | chr3:167742314 | chr3:168861620 | ENST00000468789 | - | 0 | 16 | 189_440 | -63 | 1052 | MAPK9%2C SMAD3 and probably SUV39H1 |
Tgene | MECOM | chr3:167742314 | chr3:168861620 | ENST00000472280 | - | 0 | 16 | 189_440 | -63 | 1053 | MAPK9%2C SMAD3 and probably SUV39H1 |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for GOLIM4_MECOM |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for GOLIM4_MECOM |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Tgene | MECOM | C0009375 | Colonic Neoplasms | 1 | CTD_human |
Tgene | MECOM | C0023448 | Lymphoid leukemia | 1 | CTD_human |
Tgene | MECOM | C0023470 | Myeloid Leukemia | 1 | CTD_human |
Tgene | MECOM | C0027439 | Nasopharyngeal Neoplasms | 1 | CTD_human |
Tgene | MECOM | C0919267 | ovarian neoplasm | 1 | CTD_human |
Tgene | MECOM | C1458155 | Mammary Neoplasms | 1 | CTD_human |
Tgene | MECOM | C4225221 | RADIOULNAR SYNOSTOSIS WITH AMEGAKARYOCYTIC THROMBOCYTOPENIA 2 | 1 | UNIPROT |