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Center for Computational Systems Medicine
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FusionGeneSummary

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FusionProtFeature

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FusionGeneSequence

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Fusion gene ID: 14832

FusionGeneSummary for GNA13_SLC39A11

check button Fusion gene summary
Fusion gene informationFusion gene name: GNA13_SLC39A11
Fusion gene ID: 14832
HgeneTgene
Gene symbol

GNA13

SLC39A11

Gene ID

10672

201266

Gene nameG protein subunit alpha 13solute carrier family 39 member 11
SynonymsG13C17orf26|ZIP-11|ZIP11
Cytomap

17q24.1

17q24.3-q25.1

Type of geneprotein-codingprotein-coding
Descriptionguanine nucleotide-binding protein subunit alpha-13g alpha-13guanine nucleotide binding protein (G protein), alpha 13zinc transporter ZIP11Zrt- and Irt-like protein 11solute carrier family 39 (metal ion transporter), member 11
Modification date2018052320180523
UniProtAcc

Q14344

Q8N1S5

Ensembl transtripts involved in fusion geneENST00000439174, ENST00000541118, 
ENST00000255559, ENST00000542342, 
ENST00000579988, ENST00000579732, 
Fusion gene scores* DoF score9 X 3 X 8=21612 X 6 X 7=504
# samples 1112
** MAII scorelog2(11/216*10)=-0.973527788638809
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
log2(12/504*10)=-2.0703893278914
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: GNA13 [Title/Abstract] AND SLC39A11 [Title/Abstract] AND fusion [Title/Abstract]

Functional or gene categories assigned by FusionGDB annotation
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID

check button Fusion gene information from three resources
(ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018))
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
Data typeSourceCancer typeSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
TCGARVREADTCGA-EF-5831-01AGNA13chr17

63049620

-SLC39A11chr17

71027853

-
* LD: Li Ding group's fusion gene list
  RV: Roel Verhaak group's fusion gene list
  ChiTaRs fusion database

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
In-frameENST00000439174ENST00000255559GNA13chr17

63049620

-SLC39A11chr17

71027853

-
In-frameENST00000439174ENST00000542342GNA13chr17

63049620

-SLC39A11chr17

71027853

-
5CDS-intronENST00000439174ENST00000579988GNA13chr17

63049620

-SLC39A11chr17

71027853

-
5CDS-intronENST00000439174ENST00000579732GNA13chr17

63049620

-SLC39A11chr17

71027853

-
Frame-shiftENST00000541118ENST00000255559GNA13chr17

63049620

-SLC39A11chr17

71027853

-
Frame-shiftENST00000541118ENST00000542342GNA13chr17

63049620

-SLC39A11chr17

71027853

-
5CDS-intronENST00000541118ENST00000579988GNA13chr17

63049620

-SLC39A11chr17

71027853

-
5CDS-intronENST00000541118ENST00000579732GNA13chr17

63049620

-SLC39A11chr17

71027853

-

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FusionProtFeatures for GNA13_SLC39A11


check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
GNA13

Q14344

SLC39A11

Q8N1S5

Guanine nucleotide-binding proteins (G proteins) areinvolved as modulators or transducers in various transmembranesignaling systems (PubMed:15240885, PubMed:16787920,PubMed:16705036, PubMed:27084452). Activates effector moleculeRhoA by binding and activating RhoGEFs (ARHGEF1/p115RhoGEF,ARHGEF11/PDZ-RhoGEF and ARHGEF12/LARG) (PubMed:15240885,PubMed:12515866). GNA13-dependent Rho signaling subsequentlyregulates transcription factor AP-1 (activating protein-1) (Bysimilarity). Promotes tumor cell invasion and metastasis byactivating RhoA/ROCK signaling pathway (PubMed:16787920,PubMed:16705036, PubMed:27084452). Inhibits CDH1-mediated celladhesion in process independent from Rho activation(PubMed:11976333). {ECO:0000250|UniProtKB:P27601,ECO:0000269|PubMed:11976333, ECO:0000269|PubMed:12515866,ECO:0000269|PubMed:15240885, ECO:0000269|PubMed:16705036,ECO:0000269|PubMed:16787920, ECO:0000269|PubMed:27084452}. Functions as a cellular zinc transporter.{ECO:0000250|UniProtKB:Q8BWY7}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page

.

* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
>>>>>>>>>>
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneGNA13chr17:63049620chr17:71027853ENST00000439174-2458_63170378Nucleotide bindingGTP
TgeneSLC39A11chr17:63049620chr17:71027853ENST00000255559-210194_21449336TransmembraneHelical
TgeneSLC39A11chr17:63049620chr17:71027853ENST00000255559-210263_28549336TransmembraneHelical
TgeneSLC39A11chr17:63049620chr17:71027853ENST00000255559-210290_30749336TransmembraneHelical
TgeneSLC39A11chr17:63049620chr17:71027853ENST00000255559-210322_34249336TransmembraneHelical
TgeneSLC39A11chr17:63049620chr17:71027853ENST00000255559-21072_9249336TransmembraneHelical
TgeneSLC39A11chr17:63049620chr17:71027853ENST00000542342-210194_21449343TransmembraneHelical
TgeneSLC39A11chr17:63049620chr17:71027853ENST00000542342-210263_28549343TransmembraneHelical
TgeneSLC39A11chr17:63049620chr17:71027853ENST00000542342-210290_30749343TransmembraneHelical
TgeneSLC39A11chr17:63049620chr17:71027853ENST00000542342-210322_34249343TransmembraneHelical
TgeneSLC39A11chr17:63049620chr17:71027853ENST00000542342-21072_9249343TransmembraneHelical

- In-frame and not-retained protein feature among the 13 regional features.
>>
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneGNA13chr17:63049620chr17:71027853ENST00000439174-24197_200170378Nucleotide bindingGTP
HgeneGNA13chr17:63049620chr17:71027853ENST00000439174-24291_294170378Nucleotide bindingGTP
TgeneSLC39A11chr17:63049620chr17:71027853ENST00000255559-21012_3249336TransmembraneHelical
TgeneSLC39A11chr17:63049620chr17:71027853ENST00000255559-21044_6449336TransmembraneHelical
TgeneSLC39A11chr17:63049620chr17:71027853ENST00000542342-21012_3249343TransmembraneHelical
TgeneSLC39A11chr17:63049620chr17:71027853ENST00000542342-21044_6449343TransmembraneHelical


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FusionGeneSequence for GNA13_SLC39A11


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences.
(nt: nucleotides, aa: amino acids)

* Fusion amino acid sequences.
>In-frame_GNA13_ENST00000439174_chr17_63049620_-_SLC39A11_ENST00000255559_chr17_71027853_-_457aa
MADFLPSRSVLSVCFPGCLLTSGEAEQQRKSKEIDKCLSREKTYVKRLVKILLLGAGESGKSTFLKQMRIIHGQDFDQRAREEFRPTIYS
NVIKGMRVLVDAREKLHIPWGDNSNQQHGDKMMSFDTRAPMAAQGMVETRVFLQYLPAIRALWADSGIQNAYDRRREFQLVMLAASYWSL
LAPAVEMATSSGGFGAFAFFPVAVGFTLGAAFVYLADLLMPHLGAAEDPQTTLALNFGSTLMKKKSDPEGPALLFPESELSIRIDKSENG
EAYQRKKAAATGLPEGPAVPVPSRGNLAQPGGSSWRRIALLILAITIHNVPEGLAVGVGFGAIEKTASATFESARNLAIGIGIQNFPEGL
AVSLPLRGAGFSTWRAFWYGQLSGMVEPLAGVFGAFAVVLAEPILPYALAFAAGAMVYVVMDDIIPEAQISGNGKLASWASILGFVVMMS

>In-frame_GNA13_ENST00000439174_chr17_63049620_-_SLC39A11_ENST00000542342_chr17_71027853_-_464aa
MADFLPSRSVLSVCFPGCLLTSGEAEQQRKSKEIDKCLSREKTYVKRLVKILLLGAGESGKSTFLKQMRIIHGQDFDQRAREEFRPTIYS
NVIKGMRVLVDAREKLHIPWGDNSNQQHGDKMMSFDTRAPMAAQGMVETRVFLQYLPAIRALWADSGIQNAYDRRREFQLVMLAASYWSL
LAPAVEMATSSGGFGAFAFFPVAVGFTLGAAFVYLADLLMPHLGAAEDPQTTLALNFGSTLMKKKSDPEGPALLFPESELSIRIGRAGLL
SDKSENGEAYQRKKAAATGLPEGPAVPVPSRGNLAQPGGSSWRRIALLILAITIHNVPEGLAVGVGFGAIEKTASATFESARNLAIGIGI
QNFPEGLAVSLPLRGAGFSTWRAFWYGQLSGMVEPLAGVFGAFAVVLAEPILPYALAFAAGAMVYVVMDDIIPEAQISGNGKLASWASIL


* Fusion transcript sequences (only coding sequence (CDS) region).
>In-frame_GNA13_ENST00000439174_chr17_63049620_-_SLC39A11_ENST00000255559_chr17_71027853_-_1371nt
ATGGCGGACTTCCTGCCGTCGCGGTCCGTGCTGTCCGTGTGCTTCCCCGGCTGCCTGCTGACGAGTGGCGAGGCCGAGCAGCAACGCAAG
TCCAAGGAGATCGACAAATGCCTGTCTCGGGAAAAGACCTATGTGAAGCGGCTGGTGAAGATCCTGCTGCTGGGCGCGGGCGAGAGCGGC
AAGTCCACCTTCCTGAAGCAGATGCGGATCATCCACGGGCAGGACTTCGACCAGCGCGCGCGCGAGGAGTTCCGCCCCACCATCTACAGC
AACGTGATCAAAGGTATGAGGGTGCTGGTTGATGCTCGAGAGAAGCTTCATATTCCCTGGGGAGACAACTCAAACCAACAACATGGAGAT
AAGATGATGTCGTTTGATACCCGGGCCCCCATGGCAGCCCAAGGAATGGTGGAAACAAGGGTTTTCTTACAATATCTTCCTGCTATAAGA
GCATTATGGGCAGACAGCGGCATACAGAATGCCTATGACCGGCGTCGAGAATTTCAACTGGTCATGTTGGCAGCTTCCTATTGGTCTCTT
CTGGCCCCAGCAGTTGAGATGGCCACGTCCTCTGGGGGCTTCGGTGCCTTTGCCTTCTTCCCTGTGGCTGTTGGCTTCACCCTTGGAGCG
GCTTTTGTCTACTTGGCTGACCTCCTGATGCCTCACTTGGGTGCAGCAGAAGACCCCCAGACGACCCTGGCACTGAACTTCGGCTCTACG
TTGATGAAGAAGAAGTCTGATCCTGAGGGTCCCGCGCTGCTCTTCCCTGAGAGTGAACTTTCCATCCGGATAGACAAGAGTGAGAATGGT
GAGGCATATCAGAGAAAGAAGGCGGCAGCCACTGGCCTTCCAGAGGGTCCTGCTGTCCCTGTGCCTTCTCGAGGGAATCTGGCACAGCCC
GGCGGCAGCAGCTGGAGGAGGATCGCACTGCTCATCTTGGCCATCACTATACACAACGTTCCAGAGGGTCTCGCTGTTGGAGTTGGATTT
GGGGCTATAGAAAAGACGGCATCTGCTACCTTTGAGAGTGCCAGGAATTTGGCCATTGGAATCGGGATCCAGAATTTCCCCGAGGGCCTG
GCTGTCAGCCTTCCCTTGCGAGGGGCAGGCTTCTCCACCTGGAGAGCTTTCTGGTATGGGCAGCTGAGCGGCATGGTGGAGCCCCTGGCC
GGGGTCTTTGGTGCCTTTGCCGTGGTGCTGGCTGAGCCCATCCTGCCCTACGCTCTGGCCTTTGCTGCCGGTGCCATGGTCTACGTGGTC
ATGGACGACATCATCCCCGAAGCCCAGATCAGTGGTAATGGGAAACTGGCATCCTGGGCCTCCATCCTGGGATTTGTAGTGATGATGTCA

>In-frame_GNA13_ENST00000439174_chr17_63049620_-_SLC39A11_ENST00000542342_chr17_71027853_-_1392nt
ATGGCGGACTTCCTGCCGTCGCGGTCCGTGCTGTCCGTGTGCTTCCCCGGCTGCCTGCTGACGAGTGGCGAGGCCGAGCAGCAACGCAAG
TCCAAGGAGATCGACAAATGCCTGTCTCGGGAAAAGACCTATGTGAAGCGGCTGGTGAAGATCCTGCTGCTGGGCGCGGGCGAGAGCGGC
AAGTCCACCTTCCTGAAGCAGATGCGGATCATCCACGGGCAGGACTTCGACCAGCGCGCGCGCGAGGAGTTCCGCCCCACCATCTACAGC
AACGTGATCAAAGGTATGAGGGTGCTGGTTGATGCTCGAGAGAAGCTTCATATTCCCTGGGGAGACAACTCAAACCAACAACATGGAGAT
AAGATGATGTCGTTTGATACCCGGGCCCCCATGGCAGCCCAAGGAATGGTGGAAACAAGGGTTTTCTTACAATATCTTCCTGCTATAAGA
GCATTATGGGCAGACAGCGGCATACAGAATGCCTATGACCGGCGTCGAGAATTTCAACTGGTCATGTTGGCAGCTTCCTATTGGTCTCTT
CTGGCCCCAGCAGTTGAGATGGCCACGTCCTCTGGGGGCTTCGGTGCCTTTGCCTTCTTCCCTGTGGCTGTTGGCTTCACCCTTGGAGCG
GCTTTTGTCTACTTGGCTGACCTCCTGATGCCTCACTTGGGTGCAGCAGAAGACCCCCAGACGACCCTGGCACTGAACTTCGGCTCTACG
TTGATGAAGAAGAAGTCTGATCCTGAGGGTCCCGCGCTGCTCTTCCCTGAGAGTGAACTTTCCATCCGGATAGGTAGAGCTGGGCTTCTT
TCAGACAAGAGTGAGAATGGTGAGGCATATCAGAGAAAGAAGGCGGCAGCCACTGGCCTTCCAGAGGGTCCTGCTGTCCCTGTGCCTTCT
CGAGGGAATCTGGCACAGCCCGGCGGCAGCAGCTGGAGGAGGATCGCACTGCTCATCTTGGCCATCACTATACACAACGTTCCAGAGGGT
CTCGCTGTTGGAGTTGGATTTGGGGCTATAGAAAAGACGGCATCTGCTACCTTTGAGAGTGCCAGGAATTTGGCCATTGGAATCGGGATC
CAGAATTTCCCCGAGGGCCTGGCTGTCAGCCTTCCCTTGCGAGGGGCAGGCTTCTCCACCTGGAGAGCTTTCTGGTATGGGCAGCTGAGC
GGCATGGTGGAGCCCCTGGCCGGGGTCTTTGGTGCCTTTGCCGTGGTGCTGGCTGAGCCCATCCTGCCCTACGCTCTGGCCTTTGCTGCC
GGTGCCATGGTCTACGTGGTCATGGACGACATCATCCCCGAAGCCCAGATCAGTGGTAATGGGAAACTGGCATCCTGGGCCTCCATCCTG


* Fusion transcript sequences (Full-length transcript).
>In-frame_GNA13_ENST00000439174_chr17_63049620_-_SLC39A11_ENST00000255559_chr17_71027853_-_3252nt
GCTCCGGGGCCACCGCCCCTCCGGGGCCGGGCCCGCCCTCCTTCCCTCCCTCCCTCCCCCGCTGTCCTGGCCCGCCCTGCCCGGCCCGCC
CTGCGAGTCAGTTCGCTGGTTCCCTCCCTCCCTGGGCGCGCTCGGGCCGCCGCCGCGCTCCCCGCCCTCGAGCCTCGGTGCCGGAGCCGC
CCGCCGCCGGAGGAGGAGGTGGAGGGAGCCGGAGGGGCCCGCCGAGGCGGCGGCGGCGGCGGCAAGATGGCGGACTTCCTGCCGTCGCGG
TCCGTGCTGTCCGTGTGCTTCCCCGGCTGCCTGCTGACGAGTGGCGAGGCCGAGCAGCAACGCAAGTCCAAGGAGATCGACAAATGCCTG
TCTCGGGAAAAGACCTATGTGAAGCGGCTGGTGAAGATCCTGCTGCTGGGCGCGGGCGAGAGCGGCAAGTCCACCTTCCTGAAGCAGATG
CGGATCATCCACGGGCAGGACTTCGACCAGCGCGCGCGCGAGGAGTTCCGCCCCACCATCTACAGCAACGTGATCAAAGGTATGAGGGTG
CTGGTTGATGCTCGAGAGAAGCTTCATATTCCCTGGGGAGACAACTCAAACCAACAACATGGAGATAAGATGATGTCGTTTGATACCCGG
GCCCCCATGGCAGCCCAAGGAATGGTGGAAACAAGGGTTTTCTTACAATATCTTCCTGCTATAAGAGCATTATGGGCAGACAGCGGCATA
CAGAATGCCTATGACCGGCGTCGAGAATTTCAACTGGTCATGTTGGCAGCTTCCTATTGGTCTCTTCTGGCCCCAGCAGTTGAGATGGCC
ACGTCCTCTGGGGGCTTCGGTGCCTTTGCCTTCTTCCCTGTGGCTGTTGGCTTCACCCTTGGAGCGGCTTTTGTCTACTTGGCTGACCTC
CTGATGCCTCACTTGGGTGCAGCAGAAGACCCCCAGACGACCCTGGCACTGAACTTCGGCTCTACGTTGATGAAGAAGAAGTCTGATCCT
GAGGGTCCCGCGCTGCTCTTCCCTGAGAGTGAACTTTCCATCCGGATAGACAAGAGTGAGAATGGTGAGGCATATCAGAGAAAGAAGGCG
GCAGCCACTGGCCTTCCAGAGGGTCCTGCTGTCCCTGTGCCTTCTCGAGGGAATCTGGCACAGCCCGGCGGCAGCAGCTGGAGGAGGATC
GCACTGCTCATCTTGGCCATCACTATACACAACGTTCCAGAGGGTCTCGCTGTTGGAGTTGGATTTGGGGCTATAGAAAAGACGGCATCT
GCTACCTTTGAGAGTGCCAGGAATTTGGCCATTGGAATCGGGATCCAGAATTTCCCCGAGGGCCTGGCTGTCAGCCTTCCCTTGCGAGGG
GCAGGCTTCTCCACCTGGAGAGCTTTCTGGTATGGGCAGCTGAGCGGCATGGTGGAGCCCCTGGCCGGGGTCTTTGGTGCCTTTGCCGTG
GTGCTGGCTGAGCCCATCCTGCCCTACGCTCTGGCCTTTGCTGCCGGTGCCATGGTCTACGTGGTCATGGACGACATCATCCCCGAAGCC
CAGATCAGTGGTAATGGGAAACTGGCATCCTGGGCCTCCATCCTGGGATTTGTAGTGATGATGTCACTGGACGTTGGCCTGGGCTAGGGC
TGAGACGCTTCGGACCCCGGGAAAGGCCATACGAAGAAACAGCAGTGGTTGGCTTCTATGGGACAACAAGCTTCTTTCTTCACATTAAAA
CTTTTTTCCTTCCTCTCTTCTTCATCTCATTATCCTGATTGACTCTGATTATAATAGAACCATTTTTACTTTGCTTTGAGGGAGATTTTT
GATTTAATGGGGAATTTTAAGGTGTCATGGAAATACAGATTCTTTGTTTTGGCCACTGAATGGACTCTCTCTTCAGTGGGATTATCAAGG
AACTTCAGATCAGGGAAATCTCCACTTCGGGACCTTCTATCTGCCTCCCAACTCCTCAAGGTCACCTATAGAAGCGAGCTACCAAAAGAC
GTCTCCTAAGCATTTTGGTGGCCTAGTGACTCAGGGCAGAGTGGCCAGCACACCTCTCATCCGCCCCTCCTGCTCCATCACTGCTGAGCC
TCTCCCCATCTAGAATGTTGGAACTGGAGCATCATAAAGATAGCAAGCTACCTTCCAAGGCCGAGCCAGCCCAGAGAGGAGCATGTCTTC
CTTTACCTCCCCCTAAGGAGATACTACATGGGAGGGGGACACAGAAAAAGGGAAGGAAATTGGCTAGTCTGGCTTTTTTTTTTTTTTTTT
TTAAAGGCAAAGATTGACATTATTGAAGGAAAGGGGATGAGGACAACTGTGAACTCACAGTGAGCCCTGTGGAAAGAAGAGACAGACAGA
GTGTGGGTTTGTTCGGAGGCCTCTGCTGTCAATGGATTCCAGGAGCAAGGCCATTTGTCGCGCTTTCCAAATTTCTTAGGCATTTATTTT
GATAAGTTTATAGCCATCATGTTTCTAAGAGACTTGGAGACACCAGCAAACTGCTAGAACTCAAACTCTTCAATTACTCAAAGAAGGAGC
CATTTCAGTTAACTCAAGTGAATGAAAGAGTTTTGGAATCTGCTGTGGGTCCTTCCCTGTTGACCATTTGGTAACTTATAATCTGACAAA
AACTCTTGAGCTGCAACAGGCCTTGCCAGAGGGCTCAGGATGGGAAAGGAAGAAGGGGATAGGAAAAGAAGAGGTAATTTTACATTTCCC
CTTTAAAGTAAATTTTAGCCAACTCATCATTCTGAAATGTCCCTATAAAGAATGAGTCGAACTAGACCAGAAGCCAGCCTACTCCTTCTT
ACATAGCTTCTCCAACAGGGGTAGCAATGACCTGTCCACTTCAAACACAGATAAGGCCTGCCATCCTCATTGGTTAAAGGCACACGTGAG
ACTTTCAGTGGGCTCTGCTGAGAAGGAAGGCAGCCCAGGAGTCAGGTATGCAGGCATTGCATTGTCAGTGTCTGCTCTCAGAGTTTACAC
ATTCAATTGCTTCCAAGGGTGAATCTCCTGCTCTGTGAATGCTATCAGACCCCAAAGGCCAACCTTGGGCTGGGTCTATGTACGTTCTTC
CGAAGCACTGATGATCAAAATTGAAGACACATTCAGAGGTTTGATTGGTTGAGATTAACTGGTGTGGTGGTTGGTGTATGTATGTTTTAT
TTTTATGTCTTTGTATGTAGTTCTACATAATGCAAATTGTGCTTTCTGATGGACAAGACCTCATAACTGTGATTAATATCAATAAAAAGG

>In-frame_GNA13_ENST00000439174_chr17_63049620_-_SLC39A11_ENST00000542342_chr17_71027853_-_3272nt
GCTCCGGGGCCACCGCCCCTCCGGGGCCGGGCCCGCCCTCCTTCCCTCCCTCCCTCCCCCGCTGTCCTGGCCCGCCCTGCCCGGCCCGCC
CTGCGAGTCAGTTCGCTGGTTCCCTCCCTCCCTGGGCGCGCTCGGGCCGCCGCCGCGCTCCCCGCCCTCGAGCCTCGGTGCCGGAGCCGC
CCGCCGCCGGAGGAGGAGGTGGAGGGAGCCGGAGGGGCCCGCCGAGGCGGCGGCGGCGGCGGCAAGATGGCGGACTTCCTGCCGTCGCGG
TCCGTGCTGTCCGTGTGCTTCCCCGGCTGCCTGCTGACGAGTGGCGAGGCCGAGCAGCAACGCAAGTCCAAGGAGATCGACAAATGCCTG
TCTCGGGAAAAGACCTATGTGAAGCGGCTGGTGAAGATCCTGCTGCTGGGCGCGGGCGAGAGCGGCAAGTCCACCTTCCTGAAGCAGATG
CGGATCATCCACGGGCAGGACTTCGACCAGCGCGCGCGCGAGGAGTTCCGCCCCACCATCTACAGCAACGTGATCAAAGGTATGAGGGTG
CTGGTTGATGCTCGAGAGAAGCTTCATATTCCCTGGGGAGACAACTCAAACCAACAACATGGAGATAAGATGATGTCGTTTGATACCCGG
GCCCCCATGGCAGCCCAAGGAATGGTGGAAACAAGGGTTTTCTTACAATATCTTCCTGCTATAAGAGCATTATGGGCAGACAGCGGCATA
CAGAATGCCTATGACCGGCGTCGAGAATTTCAACTGGTCATGTTGGCAGCTTCCTATTGGTCTCTTCTGGCCCCAGCAGTTGAGATGGCC
ACGTCCTCTGGGGGCTTCGGTGCCTTTGCCTTCTTCCCTGTGGCTGTTGGCTTCACCCTTGGAGCGGCTTTTGTCTACTTGGCTGACCTC
CTGATGCCTCACTTGGGTGCAGCAGAAGACCCCCAGACGACCCTGGCACTGAACTTCGGCTCTACGTTGATGAAGAAGAAGTCTGATCCT
GAGGGTCCCGCGCTGCTCTTCCCTGAGAGTGAACTTTCCATCCGGATAGGTAGAGCTGGGCTTCTTTCAGACAAGAGTGAGAATGGTGAG
GCATATCAGAGAAAGAAGGCGGCAGCCACTGGCCTTCCAGAGGGTCCTGCTGTCCCTGTGCCTTCTCGAGGGAATCTGGCACAGCCCGGC
GGCAGCAGCTGGAGGAGGATCGCACTGCTCATCTTGGCCATCACTATACACAACGTTCCAGAGGGTCTCGCTGTTGGAGTTGGATTTGGG
GCTATAGAAAAGACGGCATCTGCTACCTTTGAGAGTGCCAGGAATTTGGCCATTGGAATCGGGATCCAGAATTTCCCCGAGGGCCTGGCT
GTCAGCCTTCCCTTGCGAGGGGCAGGCTTCTCCACCTGGAGAGCTTTCTGGTATGGGCAGCTGAGCGGCATGGTGGAGCCCCTGGCCGGG
GTCTTTGGTGCCTTTGCCGTGGTGCTGGCTGAGCCCATCCTGCCCTACGCTCTGGCCTTTGCTGCCGGTGCCATGGTCTACGTGGTCATG
GACGACATCATCCCCGAAGCCCAGATCAGTGGTAATGGGAAACTGGCATCCTGGGCCTCCATCCTGGGATTTGTAGTGATGATGTCACTG
GACGTTGGCCTGGGCTAGGGCTGAGACGCTTCGGACCCCGGGAAAGGCCATACGAAGAAACAGCAGTGGTTGGCTTCTATGGGACAACAA
GCTTCTTTCTTCACATTAAAACTTTTTTCCTTCCTCTCTTCTTCATCTCATTATCCTGATTGACTCTGATTATAATAGAACCATTTTTAC
TTTGCTTTGAGGGAGATTTTTGATTTAATGGGGAATTTTAAGGTGTCATGGAAATACAGATTCTTTGTTTTGGCCACTGAATGGACTCTC
TCTTCAGTGGGATTATCAAGGAACTTCAGATCAGGGAAATCTCCACTTCGGGACCTTCTATCTGCCTCCCAACTCCTCAAGGTCACCTAT
AGAAGCGAGCTACCAAAAGACGTCTCCTAAGCATTTTGGTGGCCTAGTGACTCAGGGCAGAGTGGCCAGCACACCTCTCATCCGCCCCTC
CTGCTCCATCACTGCTGAGCCTCTCCCCATCTAGAATGTTGGAACTGGAGCATCATAAAGATAGCAAGCTACCTTCCAAGGCCGAGCCAG
CCCAGAGAGGAGCATGTCTTCCTTTACCTCCCCCTAAGGAGATACTACATGGGAGGGGGACACAGAAAAAGGGAAGGAAATTGGCTAGTC
TGGCTTTTTTTTTTTTTTTTTTTAAAGGCAAAGATTGACATTATTGAAGGAAAGGGGATGAGGACAACTGTGAACTCACAGTGAGCCCTG
TGGAAAGAAGAGACAGACAGAGTGTGGGTTTGTTCGGAGGCCTCTGCTGTCAATGGATTCCAGGAGCAAGGCCATTTGTCGCGCTTTCCA
AATTTCTTAGGCATTTATTTTGATAAGTTTATAGCCATCATGTTTCTAAGAGACTTGGAGACACCAGCAAACTGCTAGAACTCAAACTCT
TCAATTACTCAAAGAAGGAGCCATTTCAGTTAACTCAAGTGAATGAAAGAGTTTTGGAATCTGCTGTGGGTCCTTCCCTGTTGACCATTT
GGTAACTTATAATCTGACAAAAACTCTTGAGCTGCAACAGGCCTTGCCAGAGGGCTCAGGATGGGAAAGGAAGAAGGGGATAGGAAAAGA
AGAGGTAATTTTACATTTCCCCTTTAAAGTAAATTTTAGCCAACTCATCATTCTGAAATGTCCCTATAAAGAATGAGTCGAACTAGACCA
GAAGCCAGCCTACTCCTTCTTACATAGCTTCTCCAACAGGGGTAGCAATGACCTGTCCACTTCAAACACAGATAAGGCCTGCCATCCTCA
TTGGTTAAAGGCACACGTGAGACTTTCAGTGGGCTCTGCTGAGAAGGAAGGCAGCCCAGGAGTCAGGTATGCAGGCATTGCATTGTCAGT
GTCTGCTCTCAGAGTTTACACATTCAATTGCTTCCAAGGGTGAATCTCCTGCTCTGTGAATGCTATCAGACCCCAAAGGCCAACCTTGGG
CTGGGTCTATGTACGTTCTTCCGAAGCACTGATGATCAAAATTGAAGACACATTCAGAGGTTTGATTGGTTGAGATTAACTGGTGTGGTG
GTTGGTGTATGTATGTTTTATTTTTATGTCTTTGTATGTAGTTCTACATAATGCAAATTGTGCTTTCTGATGGACAAGACCTCATAACTG


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FusionGenePPI for GNA13_SLC39A11


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page

.

check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors
GNA13AKAP3, CDH1, CDH2, RGS16, ARHGEF1, DRD5, PPP5C, PRKCB, PRKCE, PRKCD, RDX, PTK2B, PRKAR2A, ARHGEF12, TEC, F2R, TBXA2R, MCF2, RIC8A, ARHGEF11, MAP3K5, ARHGEF28, USP3, AIP, ELAVL1, LRRK2, PRKACA, GNG2, AHR, CXCR5, CXCR4, CUL7, CCDC8, PHF19, SLC25A41, HOXB5, TAS2R7, FYTTD1, GNAI1, CCR1, TMEM185A, FAM63B, RD3, NTRK1, HERC2, GLI1, CDC73, GNG3, CYP2S1, PVR, FANCE, DUSP22, S1PR1, GNG4, TMEM206, TRIM25SLC39A11ELAVL1, EGFR, CD33, TMEM51, CD274, PVRIG, SLAMF1, TMEFF1, WBP1, SPN, SCN2B, PON2, IZUMO1, EPHA1, FAM174A, SIGLEC12, GAPDHS, GALNT16, LRRC4C, A2ML1, ST3GAL1, HAL, PCDHB16, CLEC2D, VASN, PMEL, NTRK3


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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RelatedDrugs for GNA13_SLC39A11


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.0 2018-04-02)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for GNA13_SLC39A11


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource
HgeneGNA13C0006413Burkitt Lymphoma1CTD_human