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Fusion gene ID: 14598 |
FusionGeneSummary for GGH_ZFAND1 |
Fusion gene summary |
Fusion gene information | Fusion gene name: GGH_ZFAND1 | Fusion gene ID: 14598 | Hgene | Tgene | Gene symbol | GGH | ZFAND1 | Gene ID | 8836 | 79752 |
Gene name | gamma-glutamyl hydrolase | zinc finger AN1-type containing 1 | |
Synonyms | GH | - | |
Cytomap | 8q12.3 | 8q21.13 | |
Type of gene | protein-coding | protein-coding | |
Description | gamma-glutamyl hydrolasegamma-Glu-X carboxypeptidasegamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase) | AN1-type zinc finger protein 1zinc finger, AN1-type domain 1 | |
Modification date | 20180523 | 20180519 | |
UniProtAcc | Q92820 | Q8TCF1 | |
Ensembl transtripts involved in fusion gene | ENST00000260118, ENST00000518113, | ENST00000523096, ENST00000220669, ENST00000522520, ENST00000519338, ENST00000521895, ENST00000521287, ENST00000517588, ENST00000519523, | |
Fusion gene scores | * DoF score | 1 X 1 X 1=1 | 1 X 1 X 1=1 |
# samples | 1 | 1 | |
** MAII score | log2(1/1*10)=3.32192809488736 | log2(1/1*10)=3.32192809488736 | |
Context | PubMed: GGH [Title/Abstract] AND ZFAND1 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | LD | BRCA | TCGA-E9-A5FL-01A | GGH | chr8 | 63930052 | - | ZFAND1 | chr8 | 82630459 | - |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000260118 | ENST00000523096 | GGH | chr8 | 63930052 | - | ZFAND1 | chr8 | 82630459 | - |
In-frame | ENST00000260118 | ENST00000220669 | GGH | chr8 | 63930052 | - | ZFAND1 | chr8 | 82630459 | - |
5CDS-5UTR | ENST00000260118 | ENST00000522520 | GGH | chr8 | 63930052 | - | ZFAND1 | chr8 | 82630459 | - |
5CDS-intron | ENST00000260118 | ENST00000519338 | GGH | chr8 | 63930052 | - | ZFAND1 | chr8 | 82630459 | - |
5CDS-5UTR | ENST00000260118 | ENST00000521895 | GGH | chr8 | 63930052 | - | ZFAND1 | chr8 | 82630459 | - |
5CDS-5UTR | ENST00000260118 | ENST00000521287 | GGH | chr8 | 63930052 | - | ZFAND1 | chr8 | 82630459 | - |
5CDS-5UTR | ENST00000260118 | ENST00000517588 | GGH | chr8 | 63930052 | - | ZFAND1 | chr8 | 82630459 | - |
5CDS-5UTR | ENST00000260118 | ENST00000519523 | GGH | chr8 | 63930052 | - | ZFAND1 | chr8 | 82630459 | - |
intron-3CDS | ENST00000518113 | ENST00000523096 | GGH | chr8 | 63930052 | - | ZFAND1 | chr8 | 82630459 | - |
intron-3CDS | ENST00000518113 | ENST00000220669 | GGH | chr8 | 63930052 | - | ZFAND1 | chr8 | 82630459 | - |
intron-5UTR | ENST00000518113 | ENST00000522520 | GGH | chr8 | 63930052 | - | ZFAND1 | chr8 | 82630459 | - |
intron-intron | ENST00000518113 | ENST00000519338 | GGH | chr8 | 63930052 | - | ZFAND1 | chr8 | 82630459 | - |
intron-5UTR | ENST00000518113 | ENST00000521895 | GGH | chr8 | 63930052 | - | ZFAND1 | chr8 | 82630459 | - |
intron-5UTR | ENST00000518113 | ENST00000521287 | GGH | chr8 | 63930052 | - | ZFAND1 | chr8 | 82630459 | - |
intron-5UTR | ENST00000518113 | ENST00000517588 | GGH | chr8 | 63930052 | - | ZFAND1 | chr8 | 82630459 | - |
intron-5UTR | ENST00000518113 | ENST00000519523 | GGH | chr8 | 63930052 | - | ZFAND1 | chr8 | 82630459 | - |
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FusionProtFeatures for GGH_ZFAND1 |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
GGH | ZFAND1 |
Hydrolyzes the polyglutamate sidechains ofpteroylpolyglutamates. Progressively removes gamma-glutamylresidues from pteroylpoly-gamma-glutamate to yield pteroyl-alpha-glutamate (folic acid) and free glutamate. May play an importantrole in the bioavailability of dietary pteroylpolyglutamates andin the metabolism of pteroylpolyglutamates and antifolates. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | >ZFAND1 | chr8:63930052 | chr8:82630459 | ENST00000220669 | - | 0 | 8 | 61_110 | 18 | 269 | Zinc finger | AN1-type 2 |
Tgene | >ZFAND1 | chr8:63930052 | chr8:82630459 | ENST00000521287 | - | 0 | 7 | 61_110 | -76 | 162 | Zinc finger | AN1-type 2 |
Tgene | >ZFAND1 | chr8:63930052 | chr8:82630459 | ENST00000521287 | - | 0 | 7 | 7_58 | -76 | 162 | Zinc finger | AN1-type 1 |
Tgene | >ZFAND1 | chr8:63930052 | chr8:82630459 | ENST00000522520 | - | 0 | 7 | 61_110 | -76 | 162 | Zinc finger | AN1-type 2 |
Tgene | >ZFAND1 | chr8:63930052 | chr8:82630459 | ENST00000522520 | - | 0 | 7 | 7_58 | -76 | 162 | Zinc finger | AN1-type 1 |
Tgene | >ZFAND1 | chr8:63930052 | chr8:82630459 | ENST00000523096 | - | 0 | 8 | 61_110 | 18 | 262 | Zinc finger | AN1-type 2 |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | >GGH | chr8:63930052 | chr8:82630459 | ENST00000260118 | - | 8 | 9 | 25_318 | 278 | 319 | Domain | Gamma-glutamyl hydrolase |
Tgene | ZFAND1 | chr8:63930052 | chr8:82630459 | ENST00000220669 | - | 0 | 8 | 7_58 | 18 | 269 | Zinc finger | AN1-type 1 |
Tgene | ZFAND1 | chr8:63930052 | chr8:82630459 | ENST00000523096 | - | 0 | 8 | 7_58 | 18 | 262 | Zinc finger | AN1-type 1 |
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FusionGeneSequence for GGH_ZFAND1 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_GGH_ENST00000260118_chr8_63930052_-_ZFAND1_ENST00000523096_chr8_82630459_-_522aa MASPGCLLCVLGLLLCGAASLELSRPHGDTAKKPIIGILMQKCRNKVMKNYGRYYIAASYVKYLESAGARVVPVRLDLTEKDYEILFKSI NGILFPGGSVDLRRSDYAKVAKIFYNLSIQSFDDGDYFPVWGTCLGFEELSLLISGECLLTATDTVDVAMPLNFTGGQLHSRMFQNFPTE LLLSLAVEPLTANFHKWSLSVKNFTMNEKLKKFFNVLTTNTDGKIEFISTMEGYKYPVYGVQWHPEKAPYEWKNLDGISHAPNAVKTAFY LAEFFVNEDFLPFVCDDCSGIFCLEHRSRESHGCPEVTVINERLKTDQHTSYPCSFKDCAERELVAVICPYCEKNFCLRHRHQSDHECEK LEIPKPRMAATQKLVKDIIDSKTGETASKRWKGAKNSETAAKVALMKLKMHADGDKSLPQVFLPKGSKEKSKPMFFCHRWSIGKAIDFAA >In-frame_GGH_ENST00000260118_chr8_63930052_-_ZFAND1_ENST00000220669_chr8_82630459_-_529aa MASPGCLLCVLGLLLCGAASLELSRPHGDTAKKPIIGILMQKCRNKVMKNYGRYYIAASYVKYLESAGARVVPVRLDLTEKDYEILFKSI NGILFPGGSVDLRRSDYAKVAKIFYNLSIQSFDDGDYFPVWGTCLGFEELSLLISGECLLTATDTVDVAMPLNFTGGQLHSRMFQNFPTE LLLSLAVEPLTANFHKWSLSVKNFTMNEKLKKFFNVLTTNTDGKIEFISTMEGYKYPVYGVQWHPEKAPYEWKNLDGISHAPNAVKTAFY LAEFFVNEDFLPFVCDDCSGIFCLEHRSRESHGCPEVTVINERLKTDQHTSYPCSFKDCAERELVAVICPYCEKNFCLRHRHQSDHECEK LEIPKPRMAATQKLVKDIIDSKTGETASKRWKGAKNSETAAKVALMKLKMHADGDKSLPQTERIYFQVFLPKGSKEKSKPMFFCHRWSIG |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_GGH_ENST00000260118_chr8_63930052_-_ZFAND1_ENST00000523096_chr8_82630459_-_1566nt ATGGCCAGTCCGGGCTGCCTGCTGTGCGTGCTGGGCCTGCTACTCTGCGGGGCGGCGAGCCTCGAGCTGTCTAGACCCCACGGCGACACC GCCAAGAAGCCCATCATCGGAATATTAATGCAAAAATGCCGTAATAAAGTCATGAAAAACTATGGAAGATACTATATTGCTGCGTCCTAT GTAAAGTACTTGGAGTCTGCAGGTGCGAGAGTTGTACCAGTAAGGCTGGATCTTACAGAGAAAGACTATGAAATACTTTTCAAATCTATT AATGGAATCCTTTTCCCTGGAGGAAGTGTTGACCTCAGACGCTCAGATTATGCTAAAGTGGCCAAAATATTTTATAACTTGTCCATACAG AGTTTTGATGATGGAGACTATTTTCCTGTGTGGGGCACATGCCTTGGATTTGAAGAGCTTTCACTGCTGATTAGTGGAGAGTGCTTATTA ACTGCCACAGATACTGTTGACGTGGCAATGCCGCTGAACTTCACTGGAGGTCAATTGCACAGCAGAATGTTCCAGAATTTTCCTACTGAG TTGTTGCTGTCATTAGCAGTAGAACCTCTGACTGCCAATTTCCATAAGTGGAGCCTCTCCGTGAAGAATTTTACAATGAATGAAAAGTTA AAGAAGTTTTTCAATGTCTTAACTACAAATACAGATGGCAAGATTGAGTTTATTTCAACAATGGAAGGATATAAGTATCCAGTATATGGT GTCCAGTGGCATCCAGAGAAAGCACCTTATGAGTGGAAGAATTTGGATGGCATTTCCCATGCACCTAATGCTGTGAAAACCGCATTTTAT TTAGCAGAGTTTTTTGTTAATGAAGATTTTCTTCCATTTGTGTGTGATGATTGTTCAGGAATATTTTGCCTTGAACACAGAAGCAGGGAG TCTCATGGTTGTCCTGAGGTGACTGTAATCAATGAGAGACTGAAGACAGATCAACATACATCTTACCCATGCTCTTTCAAAGACTGTGCT GAGAGAGAACTTGTGGCAGTTATATGTCCTTATTGTGAGAAGAATTTTTGCCTGAGACACCGTCATCAGTCAGATCATGAGTGTGAAAAA CTGGAAATCCCAAAGCCTCGAATGGCTGCCACTCAGAAACTTGTTAAAGACATTATTGATTCCAAGACAGGAGAAACAGCAAGTAAACGA TGGAAAGGTGCCAAAAATAGTGAAACAGCTGCAAAGGTTGCATTGATGAAATTAAAGATGCATGCTGATGGCGATAAGTCATTACCACAG GTTTTCTTACCTAAAGGGAGCAAAGAGAAGAGCAAACCAATGTTCTTTTGCCACCGATGGAGCATTGGAAAGGCCATAGACTTTGCCGCT TCTCTAGCCAGGCTTAAAAATGACAATAACAAATTTACAGCTAAGAAATTAAGGCTGTGTCACATTACTTCAGGAGAAGCCTTACCCTTG GATCATACTTTGGAAACCTGGATTGCTAAGGAGGATTGTCCTTTATATAATGGTGGAAATATAATCTTGGAATATCTTAATGATGAAGAA >In-frame_GGH_ENST00000260118_chr8_63930052_-_ZFAND1_ENST00000220669_chr8_82630459_-_1587nt ATGGCCAGTCCGGGCTGCCTGCTGTGCGTGCTGGGCCTGCTACTCTGCGGGGCGGCGAGCCTCGAGCTGTCTAGACCCCACGGCGACACC GCCAAGAAGCCCATCATCGGAATATTAATGCAAAAATGCCGTAATAAAGTCATGAAAAACTATGGAAGATACTATATTGCTGCGTCCTAT GTAAAGTACTTGGAGTCTGCAGGTGCGAGAGTTGTACCAGTAAGGCTGGATCTTACAGAGAAAGACTATGAAATACTTTTCAAATCTATT AATGGAATCCTTTTCCCTGGAGGAAGTGTTGACCTCAGACGCTCAGATTATGCTAAAGTGGCCAAAATATTTTATAACTTGTCCATACAG AGTTTTGATGATGGAGACTATTTTCCTGTGTGGGGCACATGCCTTGGATTTGAAGAGCTTTCACTGCTGATTAGTGGAGAGTGCTTATTA ACTGCCACAGATACTGTTGACGTGGCAATGCCGCTGAACTTCACTGGAGGTCAATTGCACAGCAGAATGTTCCAGAATTTTCCTACTGAG TTGTTGCTGTCATTAGCAGTAGAACCTCTGACTGCCAATTTCCATAAGTGGAGCCTCTCCGTGAAGAATTTTACAATGAATGAAAAGTTA AAGAAGTTTTTCAATGTCTTAACTACAAATACAGATGGCAAGATTGAGTTTATTTCAACAATGGAAGGATATAAGTATCCAGTATATGGT GTCCAGTGGCATCCAGAGAAAGCACCTTATGAGTGGAAGAATTTGGATGGCATTTCCCATGCACCTAATGCTGTGAAAACCGCATTTTAT TTAGCAGAGTTTTTTGTTAATGAAGATTTTCTTCCATTTGTGTGTGATGATTGTTCAGGAATATTTTGCCTTGAACACAGAAGCAGGGAG TCTCATGGTTGTCCTGAGGTGACTGTAATCAATGAGAGACTGAAGACAGATCAACATACATCTTACCCATGCTCTTTCAAAGACTGTGCT GAGAGAGAACTTGTGGCAGTTATATGTCCTTATTGTGAGAAGAATTTTTGCCTGAGACACCGTCATCAGTCAGATCATGAGTGTGAAAAA CTGGAAATCCCAAAGCCTCGAATGGCTGCCACTCAGAAACTTGTTAAAGACATTATTGATTCCAAGACAGGAGAAACAGCAAGTAAACGA TGGAAAGGTGCCAAAAATAGTGAAACAGCTGCAAAGGTTGCATTGATGAAATTAAAGATGCATGCTGATGGCGATAAGTCATTACCACAG ACAGAAAGAATTTACTTTCAGGTTTTCTTACCTAAAGGGAGCAAAGAGAAGAGCAAACCAATGTTCTTTTGCCACCGATGGAGCATTGGA AAGGCCATAGACTTTGCCGCTTCTCTAGCCAGGCTTAAAAATGACAATAACAAATTTACAGCTAAGAAATTAAGGCTGTGTCACATTACT TCAGGAGAAGCCTTACCCTTGGATCATACTTTGGAAACCTGGATTGCTAAGGAGGATTGTCCTTTATATAATGGTGGAAATATAATCTTG |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_GGH_ENST00000260118_chr8_63930052_-_ZFAND1_ENST00000523096_chr8_82630459_-_2942nt TCCCCTCTCGAGGACCTGGGTTGGCCAGCCCAGCTTTGTACGGGTGACTGAAGTCCACATCGACGTAACAGTTGAAAGGGAAGGACGCGG AGACCACCCGGTACCCGCCCCAGGCGTTTCCAGAGTCTCCGCTTAGGCGGCCCGTGGGGGTCGGGGTCGCGGTCGCGGTCGCGGACCGGG GACAGAGCAATGGGGCGGGCGCGCAGCGCCGGCTGCACTCCCAGAGCCTCCCACCGCCGCCCCACGGCCGCCTAGCGCGCGCCGGGACTG CATTTCCCATAGGCCCACGCTGCGGAGCACCGCCCACCCGAGTCTCACGCGAGTGCGCTGCCGCGAGGTGTCCCTGCCGCAGCCCCCGCC CGCCCGCAGAGCTTTTGAAAGGCGGCGGGAGGCGGCGAGCGCCATGGCCAGTCCGGGCTGCCTGCTGTGCGTGCTGGGCCTGCTACTCTG CGGGGCGGCGAGCCTCGAGCTGTCTAGACCCCACGGCGACACCGCCAAGAAGCCCATCATCGGAATATTAATGCAAAAATGCCGTAATAA AGTCATGAAAAACTATGGAAGATACTATATTGCTGCGTCCTATGTAAAGTACTTGGAGTCTGCAGGTGCGAGAGTTGTACCAGTAAGGCT GGATCTTACAGAGAAAGACTATGAAATACTTTTCAAATCTATTAATGGAATCCTTTTCCCTGGAGGAAGTGTTGACCTCAGACGCTCAGA TTATGCTAAAGTGGCCAAAATATTTTATAACTTGTCCATACAGAGTTTTGATGATGGAGACTATTTTCCTGTGTGGGGCACATGCCTTGG ATTTGAAGAGCTTTCACTGCTGATTAGTGGAGAGTGCTTATTAACTGCCACAGATACTGTTGACGTGGCAATGCCGCTGAACTTCACTGG AGGTCAATTGCACAGCAGAATGTTCCAGAATTTTCCTACTGAGTTGTTGCTGTCATTAGCAGTAGAACCTCTGACTGCCAATTTCCATAA GTGGAGCCTCTCCGTGAAGAATTTTACAATGAATGAAAAGTTAAAGAAGTTTTTCAATGTCTTAACTACAAATACAGATGGCAAGATTGA GTTTATTTCAACAATGGAAGGATATAAGTATCCAGTATATGGTGTCCAGTGGCATCCAGAGAAAGCACCTTATGAGTGGAAGAATTTGGA TGGCATTTCCCATGCACCTAATGCTGTGAAAACCGCATTTTATTTAGCAGAGTTTTTTGTTAATGAAGATTTTCTTCCATTTGTGTGTGA TGATTGTTCAGGAATATTTTGCCTTGAACACAGAAGCAGGGAGTCTCATGGTTGTCCTGAGGTGACTGTAATCAATGAGAGACTGAAGAC AGATCAACATACATCTTACCCATGCTCTTTCAAAGACTGTGCTGAGAGAGAACTTGTGGCAGTTATATGTCCTTATTGTGAGAAGAATTT TTGCCTGAGACACCGTCATCAGTCAGATCATGAGTGTGAAAAACTGGAAATCCCAAAGCCTCGAATGGCTGCCACTCAGAAACTTGTTAA AGACATTATTGATTCCAAGACAGGAGAAACAGCAAGTAAACGATGGAAAGGTGCCAAAAATAGTGAAACAGCTGCAAAGGTTGCATTGAT GAAATTAAAGATGCATGCTGATGGCGATAAGTCATTACCACAGGTTTTCTTACCTAAAGGGAGCAAAGAGAAGAGCAAACCAATGTTCTT TTGCCACCGATGGAGCATTGGAAAGGCCATAGACTTTGCCGCTTCTCTAGCCAGGCTTAAAAATGACAATAACAAATTTACAGCTAAGAA ATTAAGGCTGTGTCACATTACTTCAGGAGAAGCCTTACCCTTGGATCATACTTTGGAAACCTGGATTGCTAAGGAGGATTGTCCTTTATA TAATGGTGGAAATATAATCTTGGAATATCTTAATGATGAAGAACAATTCTGTAAAAATGTTGAATCTTACTTGGAATAGTCATTCAAAGA TTCAAGTCAGAAATCACAGGGAAAATTCTATTACATGTTTAAGTCCATTTATTTTACTACAAATACTATTTTTGTAATTTTTAAAAGTTG CTTTTTAACTTATTTCCCCTTATGTCACATTTTAAATTATGAGTTTTCTATTAGAGTTTTTTGGTTTTAAGTTTAATTGTGTACGGATCC TCAATTATTAGCAAATTCTTATATTTAATTAGCTTTCATTAGTTTATGCTGTAGTGACAACAACAAAGATGTATTTCCTGGTGGGGGATG TCAGCTGTTGATTGGCTGTGACACTGCTTTGTGTCATCTTCTTACCATGATCAAAGGCAAAGGAAGGGATCTCTTTTGGGACATTGTGAT TGTTTTAGCAGAGAGAGAAAGAGATGAAATACACTTCGGTTTTCTCTTAAAAGATGCATGTATCATACGTGCTTTAAGCAAGTCATGTGG CCAAGCCTAGCATCATGGAGCCAGAAAGTATAGCCTTGCTGTCTGTCTACATCATGATGTATAAATTGATATATCTACATGAATTATAGA AACTTAGAAGTGATCTTTATTCAGTCTTATAATTTTTACATGAAGAATCTTAGGCCTAGGAGGAGAAAATGATTTTCTTTCTATTACCTA ACTAGATTGGGGCATATTTCTGATAAAGACCCACCTCTAGTGAGATTCATCTTTTTTGTTTGTGTGACTATATTCCATAGAGAAGAAAGA TGGGATAGCTCAACTTCATTATATACCAAAGCAAAACACATGCCAAATGATGACTACATTTTACCAACATATTTAGACGAGTATTCTTGA CTAGTGTTTACTATCTATACCCCCAAAACTACTACTATATAGACAGAATGGAAAGTATTTCTATTTGTCCTTTTTTTGTTTTCTGTTCTA >In-frame_GGH_ENST00000260118_chr8_63930052_-_ZFAND1_ENST00000220669_chr8_82630459_-_2962nt TCCCCTCTCGAGGACCTGGGTTGGCCAGCCCAGCTTTGTACGGGTGACTGAAGTCCACATCGACGTAACAGTTGAAAGGGAAGGACGCGG AGACCACCCGGTACCCGCCCCAGGCGTTTCCAGAGTCTCCGCTTAGGCGGCCCGTGGGGGTCGGGGTCGCGGTCGCGGTCGCGGACCGGG GACAGAGCAATGGGGCGGGCGCGCAGCGCCGGCTGCACTCCCAGAGCCTCCCACCGCCGCCCCACGGCCGCCTAGCGCGCGCCGGGACTG CATTTCCCATAGGCCCACGCTGCGGAGCACCGCCCACCCGAGTCTCACGCGAGTGCGCTGCCGCGAGGTGTCCCTGCCGCAGCCCCCGCC CGCCCGCAGAGCTTTTGAAAGGCGGCGGGAGGCGGCGAGCGCCATGGCCAGTCCGGGCTGCCTGCTGTGCGTGCTGGGCCTGCTACTCTG CGGGGCGGCGAGCCTCGAGCTGTCTAGACCCCACGGCGACACCGCCAAGAAGCCCATCATCGGAATATTAATGCAAAAATGCCGTAATAA AGTCATGAAAAACTATGGAAGATACTATATTGCTGCGTCCTATGTAAAGTACTTGGAGTCTGCAGGTGCGAGAGTTGTACCAGTAAGGCT GGATCTTACAGAGAAAGACTATGAAATACTTTTCAAATCTATTAATGGAATCCTTTTCCCTGGAGGAAGTGTTGACCTCAGACGCTCAGA TTATGCTAAAGTGGCCAAAATATTTTATAACTTGTCCATACAGAGTTTTGATGATGGAGACTATTTTCCTGTGTGGGGCACATGCCTTGG ATTTGAAGAGCTTTCACTGCTGATTAGTGGAGAGTGCTTATTAACTGCCACAGATACTGTTGACGTGGCAATGCCGCTGAACTTCACTGG AGGTCAATTGCACAGCAGAATGTTCCAGAATTTTCCTACTGAGTTGTTGCTGTCATTAGCAGTAGAACCTCTGACTGCCAATTTCCATAA GTGGAGCCTCTCCGTGAAGAATTTTACAATGAATGAAAAGTTAAAGAAGTTTTTCAATGTCTTAACTACAAATACAGATGGCAAGATTGA GTTTATTTCAACAATGGAAGGATATAAGTATCCAGTATATGGTGTCCAGTGGCATCCAGAGAAAGCACCTTATGAGTGGAAGAATTTGGA TGGCATTTCCCATGCACCTAATGCTGTGAAAACCGCATTTTATTTAGCAGAGTTTTTTGTTAATGAAGATTTTCTTCCATTTGTGTGTGA TGATTGTTCAGGAATATTTTGCCTTGAACACAGAAGCAGGGAGTCTCATGGTTGTCCTGAGGTGACTGTAATCAATGAGAGACTGAAGAC AGATCAACATACATCTTACCCATGCTCTTTCAAAGACTGTGCTGAGAGAGAACTTGTGGCAGTTATATGTCCTTATTGTGAGAAGAATTT TTGCCTGAGACACCGTCATCAGTCAGATCATGAGTGTGAAAAACTGGAAATCCCAAAGCCTCGAATGGCTGCCACTCAGAAACTTGTTAA AGACATTATTGATTCCAAGACAGGAGAAACAGCAAGTAAACGATGGAAAGGTGCCAAAAATAGTGAAACAGCTGCAAAGGTTGCATTGAT GAAATTAAAGATGCATGCTGATGGCGATAAGTCATTACCACAGACAGAAAGAATTTACTTTCAGGTTTTCTTACCTAAAGGGAGCAAAGA GAAGAGCAAACCAATGTTCTTTTGCCACCGATGGAGCATTGGAAAGGCCATAGACTTTGCCGCTTCTCTAGCCAGGCTTAAAAATGACAA TAACAAATTTACAGCTAAGAAATTAAGGCTGTGTCACATTACTTCAGGAGAAGCCTTACCCTTGGATCATACTTTGGAAACCTGGATTGC TAAGGAGGATTGTCCTTTATATAATGGTGGAAATATAATCTTGGAATATCTTAATGATGAAGAACAATTCTGTAAAAATGTTGAATCTTA CTTGGAATAGTCATTCAAAGATTCAAGTCAGAAATCACAGGGAAAATTCTATTACATGTTTAAGTCCATTTATTTTACTACAAATACTAT TTTTGTAATTTTTAAAAGTTGCTTTTTAACTTATTTCCCCTTATGTCACATTTTAAATTATGAGTTTTCTATTAGAGTTTTTTGGTTTTA AGTTTAATTGTGTACGGATCCTCAATTATTAGCAAATTCTTATATTTAATTAGCTTTCATTAGTTTATGCTGTAGTGACAACAACAAAGA TGTATTTCCTGGTGGGGGATGTCAGCTGTTGATTGGCTGTGACACTGCTTTGTGTCATCTTCTTACCATGATCAAAGGCAAAGGAAGGGA TCTCTTTTGGGACATTGTGATTGTTTTAGCAGAGAGAGAAAGAGATGAAATACACTTCGGTTTTCTCTTAAAAGATGCATGTATCATACG TGCTTTAAGCAAGTCATGTGGCCAAGCCTAGCATCATGGAGCCAGAAAGTATAGCCTTGCTGTCTGTCTACATCATGATGTATAAATTGA TATATCTACATGAATTATAGAAACTTAGAAGTGATCTTTATTCAGTCTTATAATTTTTACATGAAGAATCTTAGGCCTAGGAGGAGAAAA TGATTTTCTTTCTATTACCTAACTAGATTGGGGCATATTTCTGATAAAGACCCACCTCTAGTGAGATTCATCTTTTTTGTTTGTGTGACT ATATTCCATAGAGAAGAAAGATGGGATAGCTCAACTTCATTATATACCAAAGCAAAACACATGCCAAATGATGACTACATTTTACCAACA TATTTAGACGAGTATTCTTGACTAGTGTTTACTATCTATACCCCCAAAACTACTACTATATAGACAGAATGGAAAGTATTTCTATTTGTC |
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FusionGenePPI for GGH_ZFAND1 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
GGH | GGH, COPS5, FBXO6, ATP6V1B1, CDKN2AIP, DLD, LIG4, GDI1, SGTA, TRIP6, OS9, ZMYM3, TXNDC16, LRWD1, MKLN1, UGDH, ATP2B2, DCAF8, CERCAM, GPR98, TGOLN2, MICA, NTRK1, MCM2, ITGAV | ZFAND1 | ELAVL1 |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for GGH_ZFAND1 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for GGH_ZFAND1 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | GGH | C0001973 | Alcoholic Intoxication, Chronic | 1 | PSYGENET |
Hgene | GGH | C0003873 | Rheumatoid Arthritis | 1 | CTD_human |
Hgene | GGH | C0005695 | Bladder Neoplasm | 1 | CTD_human |
Hgene | GGH | C0007138 | Carcinoma, Transitional Cell | 1 | CTD_human |
Hgene | GGH | C0009404 | Colorectal Neoplasms | 1 | CTD_human |
Hgene | GGH | C0023893 | Liver Cirrhosis, Experimental | 1 | CTD_human |
Hgene | GGH | C4277682 | Chemical and Drug Induced Liver Injury | 1 | CTD_human |