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Fusion gene ID: 13791 |
FusionGeneSummary for FOXK2_OGFOD3 |
Fusion gene summary |
Fusion gene information | Fusion gene name: FOXK2_OGFOD3 | Fusion gene ID: 13791 | Hgene | Tgene | Gene symbol | FOXK2 | OGFOD3 | Gene ID | 3607 | 79701 |
Gene name | forkhead box K2 | 2-oxoglutarate and iron dependent oxygenase domain containing 3 | |
Synonyms | ILF|ILF-1|ILF1 | C17orf101 | |
Cytomap | 17q25.3 | 17q25.3 | |
Type of gene | protein-coding | protein-coding | |
Description | forkhead box protein K2FOXK1cellular transcription factor ILF-1interleukin enhancer-binding factor 1 | 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 3PKHD domain-containing transmembrane protein C17orf101 | |
Modification date | 20180523 | 20180519 | |
UniProtAcc | Q01167 | Q6PK18 | |
Ensembl transtripts involved in fusion gene | ENST00000335255, ENST00000529652, | ENST00000313056, ENST00000329197, ENST00000578287, | |
Fusion gene scores | * DoF score | 25 X 11 X 12=3300 | 4 X 5 X 5=100 |
# samples | 23 | 5 | |
** MAII score | log2(23/3300*10)=-3.8427602581888 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(5/100*10)=-1 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: FOXK2 [Title/Abstract] AND OGFOD3 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | FOXK2 | GO:0045944 | positive regulation of transcription by RNA polymerase II | 9065434 |
Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | LD | BLCA | TCGA-XF-AAMX-01A | FOXK2 | chr17 | 80478183 | + | OGFOD3 | chr17 | 80367286 | - |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000335255 | ENST00000313056 | FOXK2 | chr17 | 80478183 | + | OGFOD3 | chr17 | 80367286 | - |
In-frame | ENST00000335255 | ENST00000329197 | FOXK2 | chr17 | 80478183 | + | OGFOD3 | chr17 | 80367286 | - |
5CDS-intron | ENST00000335255 | ENST00000578287 | FOXK2 | chr17 | 80478183 | + | OGFOD3 | chr17 | 80367286 | - |
intron-3CDS | ENST00000529652 | ENST00000313056 | FOXK2 | chr17 | 80478183 | + | OGFOD3 | chr17 | 80367286 | - |
intron-3CDS | ENST00000529652 | ENST00000329197 | FOXK2 | chr17 | 80478183 | + | OGFOD3 | chr17 | 80367286 | - |
intron-intron | ENST00000529652 | ENST00000578287 | FOXK2 | chr17 | 80478183 | + | OGFOD3 | chr17 | 80367286 | - |
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FusionProtFeatures for FOXK2_OGFOD3 |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
FOXK2 | OGFOD3 |
Transcriptional regulator that recognizes the coresequence 5'-TAAACA-3'. Binds to NFAT-like motifs (purine-rich) inthe IL2 promoter (PubMed:1339390). Positively regulates WNT/beta-catenin signaling by translocating DVL proteins into the nucleus(PubMed:25805136). Also binds to HIV-1 long terminal repeat. Maybe involved in both positive and negative regulation of importantviral and cellular promoter elements (PubMed:1909027).{ECO:0000269|PubMed:1339390, ECO:0000269|PubMed:1909027,ECO:0000269|PubMed:25805136}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | FOXK2 | chr17:80478183 | chr17:80367286 | ENST00000335255 | + | 1 | 9 | 10_93 | 139 | 661 | Compositional bias | Note=Gly-rich |
Hgene | FOXK2 | chr17:80478183 | chr17:80367286 | ENST00000335255 | + | 1 | 9 | 54_128 | 139 | 661 | Domain | FHA |
Tgene | >OGFOD3 | chr17:80478183 | chr17:80367286 | ENST00000313056 | - | 2 | 9 | 207_309 | 126 | 320 | Domain | Fe2OG dioxygenase |
Tgene | >OGFOD3 | chr17:80478183 | chr17:80367286 | ENST00000329197 | - | 2 | 10 | 207_309 | 126 | 446 | Domain | Fe2OG dioxygenase |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | >FOXK2 | chr17:80478183 | chr17:80367286 | ENST00000335255 | + | 1 | 9 | 258_353 | 139 | 661 | DNA binding | Fork-head |
Hgene | >FOXK2 | chr17:80478183 | chr17:80367286 | ENST00000335255 | + | 1 | 9 | 300_318 | 139 | 661 | Region | Note=DNA-binding%3B major groove |
Hgene | >FOXK2 | chr17:80478183 | chr17:80367286 | ENST00000335255 | + | 1 | 9 | 328_332 | 139 | 661 | Region | Note=DNA-binding%3B minor groove |
Hgene | >FOXK2 | chr17:80478183 | chr17:80367286 | ENST00000335255 | + | 1 | 9 | 348_353 | 139 | 661 | Region | Note=DNA-binding%3B minor groove |
Tgene | OGFOD3 | chr17:80478183 | chr17:80367286 | ENST00000313056 | - | 2 | 9 | 1_42 | 126 | 320 | Topological domain | Cytoplasmic |
Tgene | OGFOD3 | chr17:80478183 | chr17:80367286 | ENST00000313056 | - | 2 | 9 | 66_319 | 126 | 320 | Topological domain | Lumenal |
Tgene | OGFOD3 | chr17:80478183 | chr17:80367286 | ENST00000329197 | - | 2 | 10 | 1_42 | 126 | 446 | Topological domain | Cytoplasmic |
Tgene | OGFOD3 | chr17:80478183 | chr17:80367286 | ENST00000329197 | - | 2 | 10 | 66_319 | 126 | 446 | Topological domain | Lumenal |
Tgene | OGFOD3 | chr17:80478183 | chr17:80367286 | ENST00000313056 | - | 2 | 9 | 43_65 | 126 | 320 | Transmembrane | Helical%3B Signal-anchor for type II membrane protein |
Tgene | OGFOD3 | chr17:80478183 | chr17:80367286 | ENST00000329197 | - | 2 | 10 | 43_65 | 126 | 446 | Transmembrane | Helical%3B Signal-anchor for type II membrane protein |
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FusionGeneSequence for FOXK2_OGFOD3 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_FOXK2_ENST00000335255_chr17_80478183_+_OGFOD3_ENST00000313056_chr17_80367286_-_333aa MAAAAAALSGAGTPPAGGGAGGGGAGGGGSPPGGWAVARLEGREFEYLMKKRSVTIGRNSSQGSVDVSMGHSSFISRRHLEIFTPPGGGG HGGAAPELPPAQPRPDAGGDFYLRCLGKNGVFVDGVFQRRGAPPLQLPRVVAEKGLSLGGSDGGASILDLHSGALSVGKHFVNLYRYFGD KIQNIFSEEDFRLYREVRQKVQLTIAEAFGISASSLHLTKPTFFSRINSTEARTAHDEYWHAHVDKVTYGSFDYTSLLYLSNYLEDFGGG >In-frame_FOXK2_ENST00000335255_chr17_80478183_+_OGFOD3_ENST00000329197_chr17_80367286_-_345aa MAAAAAALSGAGTPPAGGGAGGGGAGGGGSPPGGWAVARLEGREFEYLMKKRSVTIGRNSSQGSVDVSMGHSSFISRRHLEIFTPPGGGG HGGAAPELPPAQPRPDAGGDFYLRCLGKNGVFVDGVFQRRGAPPLQLPRVVAEKGLSLGGSDGGASILDLHSGALSVGKHFVNLYRYFGD KIQNIFSEEDFRLYREVRQKVQLTIAEAFGISASSLHLTKPTFFSRINSTEARTAHDEYWHAHVDKVTYGSFDYTSLLYLSNYLEDFGGG |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_FOXK2_ENST00000335255_chr17_80478183_+_OGFOD3_ENST00000313056_chr17_80367286_-_999nt ATGGCGGCGGCCGCGGCGGCGCTCTCGGGCGCGGGCACGCCACCCGCGGGCGGCGGGGCCGGGGGCGGCGGGGCCGGGGGCGGCGGGTCC CCGCCGGGCGGCTGGGCCGTGGCGCGCCTGGAGGGCCGCGAGTTCGAGTATCTGATGAAGAAGCGCTCGGTGACCATCGGCCGCAACTCG TCGCAGGGCTCGGTGGACGTGAGCATGGGCCACTCGAGCTTCATCTCCCGGCGCCACCTCGAGATCTTCACGCCCCCGGGCGGCGGCGGC CATGGCGGGGCCGCTCCGGAGCTGCCGCCCGCGCAGCCCAGGCCCGACGCCGGCGGCGACTTCTACCTGCGCTGCTTGGGCAAGAACGGG GTATTCGTGGACGGCGTGTTCCAGAGGCGCGGGGCGCCGCCGCTGCAGCTGCCGCGCGTCGTAGCTGAAAAGGGGCTCTCCCTGGGAGGA TCTGACGGAGGGGCATCCATTCTGGACTTGCACTCAGGGGCCCTGTCTGTCGGGAAGCACTTTGTGAACCTGTACAGATACTTCGGGGAT AAAATACAGAACATCTTCTCAGAGGAGGACTTCCGGTTATACCGGGAGGTGCGGCAGAAGGTCCAGCTCACCATTGCTGAGGCTTTTGGC ATCAGCGCATCCTCGCTGCATCTGACCAAGCCCACCTTCTTCTCCCGCATAAACAGCACGGAAGCGCGGACGGCGCACGACGAGTACTGG CATGCGCACGTGGACAAGGTGACCTACGGCTCCTTCGACTACACCTCGCTGCTGTACCTCTCCAACTACCTGGAGGACTTCGGCGGAGGG CGGTTCATGTTCATGGAGGAGGGTGCCAACAAGACGGTGGAGCCGAGAGCTGGTCGCGTCTCCTTCTTCACCTCGGGGTCCGAGAACCTA CACCGCGTGGAGAAGGTCCACTGGGGCACCCGTTACGCCATCACCATCGCCTTCAGCTGCAACCCCGACCATGGCATCGAGGACCCAGCG >In-frame_FOXK2_ENST00000335255_chr17_80478183_+_OGFOD3_ENST00000329197_chr17_80367286_-_1035nt ATGGCGGCGGCCGCGGCGGCGCTCTCGGGCGCGGGCACGCCACCCGCGGGCGGCGGGGCCGGGGGCGGCGGGGCCGGGGGCGGCGGGTCC CCGCCGGGCGGCTGGGCCGTGGCGCGCCTGGAGGGCCGCGAGTTCGAGTATCTGATGAAGAAGCGCTCGGTGACCATCGGCCGCAACTCG TCGCAGGGCTCGGTGGACGTGAGCATGGGCCACTCGAGCTTCATCTCCCGGCGCCACCTCGAGATCTTCACGCCCCCGGGCGGCGGCGGC CATGGCGGGGCCGCTCCGGAGCTGCCGCCCGCGCAGCCCAGGCCCGACGCCGGCGGCGACTTCTACCTGCGCTGCTTGGGCAAGAACGGG GTATTCGTGGACGGCGTGTTCCAGAGGCGCGGGGCGCCGCCGCTGCAGCTGCCGCGCGTCGTAGCTGAAAAGGGGCTCTCCCTGGGAGGA TCTGACGGAGGGGCATCCATTCTGGACTTGCACTCAGGGGCCCTGTCTGTCGGGAAGCACTTTGTGAACCTGTACAGATACTTCGGGGAT AAAATACAGAACATCTTCTCAGAGGAGGACTTCCGGTTATACCGGGAGGTGCGGCAGAAGGTCCAGCTCACCATTGCTGAGGCTTTTGGC ATCAGCGCATCCTCGCTGCATCTGACCAAGCCCACCTTCTTCTCCCGCATAAACAGCACGGAAGCGCGGACGGCGCACGACGAGTACTGG CATGCGCACGTGGACAAGGTGACCTACGGCTCCTTCGACTACACCTCGCTGCTGTACCTCTCCAACTACCTGGAGGACTTCGGCGGAGGG CGGTTCATGTTCATGGAGGAGGGTGCCAACAAGACGGTGGAGCCGAGAGCTGGATGTTTTTGTTTCCGGATGATGTCTTGTGGGTTCCAA GAAGTTAATGGACCGAGAGCCAGTGAAGCTGCTGGTGCGAAGGCTGGAGTCAGGTGTCCTCCGGGGACTCACCACCCGCCCGAGAGGGGA |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_FOXK2_ENST00000335255_chr17_80478183_+_OGFOD3_ENST00000313056_chr17_80367286_-_4348nt CGGCCGCGCGTGCTCCCGCCCCTCGCCGCCGCTCGCTCGCTCGCCGGCCGGCGGCCTCCGCTCGGCCCCCTCCCTCAGCTCCGGTGCGCG GCGGCCGACGACCCGCGCGGCCTGGGCCTCGGCCCGCGCCACCGGCGCCCGCGCGGAGCGGCCCGGGGGCCCTCACGCAGGCCCATGGCG GCGGCCGCGGCGGCGCTCTCGGGCGCGGGCACGCCACCCGCGGGCGGCGGGGCCGGGGGCGGCGGGGCCGGGGGCGGCGGGTCCCCGCCG GGCGGCTGGGCCGTGGCGCGCCTGGAGGGCCGCGAGTTCGAGTATCTGATGAAGAAGCGCTCGGTGACCATCGGCCGCAACTCGTCGCAG GGCTCGGTGGACGTGAGCATGGGCCACTCGAGCTTCATCTCCCGGCGCCACCTCGAGATCTTCACGCCCCCGGGCGGCGGCGGCCATGGC GGGGCCGCTCCGGAGCTGCCGCCCGCGCAGCCCAGGCCCGACGCCGGCGGCGACTTCTACCTGCGCTGCTTGGGCAAGAACGGGGTATTC GTGGACGGCGTGTTCCAGAGGCGCGGGGCGCCGCCGCTGCAGCTGCCGCGCGTCGTAGCTGAAAAGGGGCTCTCCCTGGGAGGATCTGAC GGAGGGGCATCCATTCTGGACTTGCACTCAGGGGCCCTGTCTGTCGGGAAGCACTTTGTGAACCTGTACAGATACTTCGGGGATAAAATA CAGAACATCTTCTCAGAGGAGGACTTCCGGTTATACCGGGAGGTGCGGCAGAAGGTCCAGCTCACCATTGCTGAGGCTTTTGGCATCAGC GCATCCTCGCTGCATCTGACCAAGCCCACCTTCTTCTCCCGCATAAACAGCACGGAAGCGCGGACGGCGCACGACGAGTACTGGCATGCG CACGTGGACAAGGTGACCTACGGCTCCTTCGACTACACCTCGCTGCTGTACCTCTCCAACTACCTGGAGGACTTCGGCGGAGGGCGGTTC ATGTTCATGGAGGAGGGTGCCAACAAGACGGTGGAGCCGAGAGCTGGTCGCGTCTCCTTCTTCACCTCGGGGTCCGAGAACCTACACCGC GTGGAGAAGGTCCACTGGGGCACCCGTTACGCCATCACCATCGCCTTCAGCTGCAACCCCGACCATGGCATCGAGGACCCAGCGTTCCCG TAGCCAGCAGCCGGGCCAAGGTAACTTCAGGAGGGCCCGTGTGGAGGCAGCCGCGCCAGTCGTGCACCCACCCCCACGTCCACCCGCTCC TGTTGCACAGAGTGCCTTAGGAATTCTCTGATTTTGATTTGCTGACGTGTTAATCTTTTCATCTGTGAGTAAATGAAGGGAACCAGCTTT TCACTTCTCCAGCATCATGTGTGCTTGGGCTGTAGGCCTGGGAGCCTGAGGTGGAGGCCAGGAAAGGGACCCAGCAGGACGGGGCACAAG TCCCCATCTGTGAATGGACGGGACTCATCCACCCAGGTTCAGCAACCCCCCGGGACTCGTCCAGGTTCAGCAACCCCCCGGCCCATCAAA GACTGGCTAAAGCATCAGCCATAAATGGGGACAAACGTGGGGCCAGCAGCTTCTGTTCGGGGTCTCGGCATCAGCAAACCGCAGCAGCTT TGGAGAAGGGTCCGTGAGTGGCGGCTCTGGAGGCAGCAACGGGGTCCTTTGGGGTGGGTGGGAGTTCTGCTGGATTCAGGTGGAGGTGAA CATCTGCCGTTCCCACAGCCCTGCGTGCACCCCCAATGCTGCTGGCCCACAAATCACCGTGGGCCACGGCCCCACCACACCAGGCTTGGC CCTGTCAGCGGCCAGCATCCCAAGGGCCAGGGTCCGAGTGTCCTCACCAAGGAGGCTCTTGGCGTCGCTGTGCCGGCTCCCATGGGCCTT CTGCTGGGTCGAGGGTAGGTCTCCTCCTCCCCCTTTGCCCTGGCATTAAACTGATGGTCAGGCTGGGCGCGGTGGCTCACACCTGTAATC TCAGCACTGCGGGAGGCCGAGGCAGGAGGATCACTTGAGGTCAGGAGTTCAAGACCAGCCTGGCCAACATGGCGAAACCCTGTCTCTACT AAAAACACAAAAACAAATTAATCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGGGGCAGAAGTTGCAGTGAGCCG AGATCGTGCCACTACACTCCAGCCTGGGTGACAGAGTGAGACTCCATCTTAAAAATATAAAAATAAAGTGGTGGTCAGAGGAGCCCCGAA TAGACCAGTTGTGGAGAGGCCTGGGTGGGGTGGCTGGCAGGGAGGGCAGGCCAAGCCCAGTTTCTGCCCACAGTCACCTCGAGGTGACTG TCCAGGGCTTTGGGCACCTTCCCGGGAGGGGGACGGCCGCCCACCCTGAGTGGTGTTGGAAGCTGGGCTCTCCTGGATGCCCTGACCCAG CTGCCTGGGGAGAGCCCTGGGCCCCTCCTCCCTCAGCACCTCCTCCCTCAGCCCCTCCTGCCTCGGTCCCTCCTCCCTTAGCCTGTCTGG CATAGATCCATGTTCCCTAGCCCCTGGCACAGGTGCCTCTGACTGGAGGAGGCCCCACCTGTGGCCCGGGAGCTGCTCTGGGGGTTGATA AAGGGCAGCATTATTGGGTCCTGGGAAGGAGCGGGCGTGAGGCCAGCTGAGGCATGGTGACCCCTGGGAAGGAGCGGGCGTGAGGCCAGC TGAGGCATGGTGACCCCTGGGAAGGAGCGGGCGTGAGGCCAGCTGAGGCATGGTGACCCCTGGGAAGGAGCGGGCGTGAGGCCAGCTGAG GCATGGTGACCCCTGGGAAGGAGCGGGCGTGAGGCCAGCTGAGGCATGGTGACCCCTGGGTACGGGGGACTTGGGGGCCGCACCTTGGTT TGCCCAGGGCCCCTCCTGCACCACGGGCCACATGCGGAGGACGGCGTGGGATAGGCTCCCTGGGTCCACAGCTTCTGCCCGTGTATGGGG AACCCTCCTTGGTCAGGGCTGCAGGCTCTGGGCAGATGGGGCAGGAACCCTGAGGCTCCCGCGCCCTCCCATGGCCTCTGATGTGGGACA CTGGAGCGAGGCACGATTCTGAAGGACTCCATGGATCTGGGAGGATGAGGCCCACCTCCGGTTGGTGGCCAAAGCCGTCCTTGCGGGGCC GGCTGCTTCACGGACACTCTCCGGGTCGGGCTGGTGGGCCCCATCGTGGGTGGGAAGTCGCCTGAGCCTGGGCCGCCCTTGAGCTTCTCC CAGTCTTGACTTTCCAGAGGGTCCGTGGCTGTGGTCATGGTCGGGGCAGGTGGAAAATGCTGCATGGAAACCTGATCCTGTCACCTTGGA GTAAATGATGATGTCGCCGGCTTCTCGCCACGTCTAAAGGATAAATGCATTTGAAGAAAGTGGGTGTTGGGTTTGTTATGGGTTAAAGTG CTTTTGAAATAAGTAAATTATTAGTTTGATTTTCATTCTTGGCTACTTACACTATTCATGATAATCACAGAGATACTTGGACAAAGAAAT ATATTTGGGCAAAAGCAAGAATTTCCTTCTTTTTTTTTTTGAGACGGAGTCTAACTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCT CGGCTCACTGCAAGGTCCACCTCCTGGGTTCCCACCATTCTCCTGCCTCAACCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCATG CCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGATTTCACCGTGTTAGCCAGAATGAAGAATTTCCTTCTGAAGTGGGAACATATG GCTCATGCTGGTAATCCCAGCACTTTGGGAGGCCAAGGTAGGAAGATCACTTGAGCCCAGGAGTTGGAGACCCATCTGTGCAACATAGTG AGACGCTGTCTGTACAAGAAACTTTTAAAAAATGTAGCTGGGCGTGGCAGTGTGCTCCTGTGGTCCCAGCTACTCGGAGCTGAGGCAGGA CGACTGCTTGAGCCCAGGAGGTCGAGGCTACAGTGAGCTGTGACGGCTCCACTGCATTCCAGCCTGGGAGACAGCAAGATACTGTCTCAA AAAAAAATTTATCATTGAAGCCTGGGCATTTTAAAAAAATAAAAAGGTGGGAAAATACGTGGGCACAGCAGTGAATCCTCACACCCTGGG CTTTGCCCAAGAAGTGCTCGTGAACCTGATGAAAGTGTCGGGTGTGGCCGACGTGAGGCTGTTCCAGGAGCCACGAGGGGTGATTGGTTC CGCTAGAAGGTTCCAGGGAGGAACTGGAGTCTCAGGTGTGTCCTCTGATGAGTGATCTATTTTTAAGTAAAAGTGTTTCATTAAAGTCAA >In-frame_FOXK2_ENST00000335255_chr17_80478183_+_OGFOD3_ENST00000329197_chr17_80367286_-_1774nt CGGCCGCGCGTGCTCCCGCCCCTCGCCGCCGCTCGCTCGCTCGCCGGCCGGCGGCCTCCGCTCGGCCCCCTCCCTCAGCTCCGGTGCGCG GCGGCCGACGACCCGCGCGGCCTGGGCCTCGGCCCGCGCCACCGGCGCCCGCGCGGAGCGGCCCGGGGGCCCTCACGCAGGCCCATGGCG GCGGCCGCGGCGGCGCTCTCGGGCGCGGGCACGCCACCCGCGGGCGGCGGGGCCGGGGGCGGCGGGGCCGGGGGCGGCGGGTCCCCGCCG GGCGGCTGGGCCGTGGCGCGCCTGGAGGGCCGCGAGTTCGAGTATCTGATGAAGAAGCGCTCGGTGACCATCGGCCGCAACTCGTCGCAG GGCTCGGTGGACGTGAGCATGGGCCACTCGAGCTTCATCTCCCGGCGCCACCTCGAGATCTTCACGCCCCCGGGCGGCGGCGGCCATGGC GGGGCCGCTCCGGAGCTGCCGCCCGCGCAGCCCAGGCCCGACGCCGGCGGCGACTTCTACCTGCGCTGCTTGGGCAAGAACGGGGTATTC GTGGACGGCGTGTTCCAGAGGCGCGGGGCGCCGCCGCTGCAGCTGCCGCGCGTCGTAGCTGAAAAGGGGCTCTCCCTGGGAGGATCTGAC GGAGGGGCATCCATTCTGGACTTGCACTCAGGGGCCCTGTCTGTCGGGAAGCACTTTGTGAACCTGTACAGATACTTCGGGGATAAAATA CAGAACATCTTCTCAGAGGAGGACTTCCGGTTATACCGGGAGGTGCGGCAGAAGGTCCAGCTCACCATTGCTGAGGCTTTTGGCATCAGC GCATCCTCGCTGCATCTGACCAAGCCCACCTTCTTCTCCCGCATAAACAGCACGGAAGCGCGGACGGCGCACGACGAGTACTGGCATGCG CACGTGGACAAGGTGACCTACGGCTCCTTCGACTACACCTCGCTGCTGTACCTCTCCAACTACCTGGAGGACTTCGGCGGAGGGCGGTTC ATGTTCATGGAGGAGGGTGCCAACAAGACGGTGGAGCCGAGAGCTGGATGTTTTTGTTTCCGGATGATGTCTTGTGGGTTCCAAGAAGTT AATGGACCGAGAGCCAGTGAAGCTGCTGGTGCGAAGGCTGGAGTCAGGTGTCCTCCGGGGACTCACCACCCGCCCGAGAGGGGAGAGACA CATGCGATTCTGGAAGCTGAGAGCATTGCTTATTGTTGATTCCTTGGTTGCCGTGCTGAGTCCTGCTTTAAGGAAGCAGGTCGCGTCTCC TTCTTCACCTCGGGGTCCGAGAACCTACACCGCGTGGAGAAGGTCCACTGGGGCACCCGTTACGCCATCACCATCGCCTTCAGCTGCAAC CCCGACCATGGCATCGAGGACCCAGCGTTCCCGTAGCCAGCAGCCGGGCCAAGGTAACTTCAGGAGGGCCCGTGTGGAGGCAGCCGCGCC AGTCGTGCACCCACCCCCACGTCCACCCGCTCCTGTTGCACAGAGTGCCTTAGGAATTCTCTGATTTTGATTTGCTGACGTGTTAATCTT TTCATCTGTGAGTAAATGAAGGGAACCAGCTTTTCACTTCTCCAGCATCATGTGTGCTTGGGCTGTAGGCCTGGGAGCCTGAGGTGGAGG CCAGGAAAGGGACCCAGCAGGACGGGGCACAAGTCCCCATCTGTGAATGGACGGGACTCATCCACCCAGGTTCAGCAACCCCCCGGGACT |
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FusionGenePPI for FOXK2_OGFOD3 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
FOXK2 | BAP1, AMOT, IRF2, CBX6, SOX2, HECW2, GPS2, RBBP7, SMU1, TEAD1, ESR1, BARD1, XPO1, SAP30, CTR9, HCFC1, MAX, TEAD2, FOXE1, FOXK1, SIN3A, ARID4B, BPTF, NCOR1, ARID4A, SMARCA5, TFAP4, MNT, SAP130, SUDS3, SMARCA1, ZBTB10, BRMS1L, KANSL1, TBL1XR1, ASXL2, BRMS1, MAP1B, TPR, CIC, C17orf49, LIG3, KMT2D, ASXL1, CHD4, HDAC2, ING2, MCRS1, PRDM10, RB1, RBBP5, TBP, KDM1B, DVL2, ING1, KDM5A, KANSL3, PHF20L1, CUX1, DMAP1, DRAP1, HIRA, HMGXB4, HOXD13, NCOR2, SATB2, SIN3B, TBL1X, TBL1Y, ADNP, C11orf30, KANSL2, DPY30, GTF3C3, H2AFY, HOXB9, NFYC, NRF1, NUP107, PSIP1, SAP30L, SF3B1, TP53BP1, SNX9, UBR4, RBM26, PUF60, ANKRD52, EIF2AK3, CHEK2, PRRC2C, UHRF1BP1, ANKRD28, SRPK2, CDK11A, KIAA0513, PER1, USP47, FLJ25613, TMF1, ABHD10, EIF5B, KANK2, RSRC2, FAM120A, NHP2, PHF23, SNRNP200, THRAP3, TP53, YTHDC1, HDAC1, NFATC1, DVL3, ZNF428, AHCYL2, TNFRSF1A, TULP3, FAM60A, PDGFRB, IKZF1, TP63, ZBTB39, CPD, TRIM25 | OGFOD3 | ATP2C1, CLGN, CANX, C1GALT1C1, DNAJB9, NHLRC3, GPC6, LMF1, EIF2AK3, TRIP6, MPC2 |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for FOXK2_OGFOD3 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for FOXK2_OGFOD3 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |