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Fusion gene ID: 13541 |
FusionGeneSummary for FKBP8_SLC1A6 |
Fusion gene summary |
Fusion gene information | Fusion gene name: FKBP8_SLC1A6 | Fusion gene ID: 13541 | Hgene | Tgene | Gene symbol | FKBP8 | SLC1A6 | Gene ID | 23770 | 6511 |
Gene name | FK506 binding protein 8 | solute carrier family 1 member 6 | |
Synonyms | FKBP38|FKBPr38 | EAAT4 | |
Cytomap | 19p13.11 | 19p13.12 | |
Type of gene | protein-coding | protein-coding | |
Description | peptidyl-prolyl cis-trans isomerase FKBP838 kDa FK506-binding protein38 kDa FKBPFK506 binding protein 8, 38kDaFKBP-38FKBP-8PPIase FKBP8hFKBP38rotamase | excitatory amino acid transporter 4sodium-dependent glutamate/aspartate transportersolute carrier family 1 (high affinity aspartate/glutamate transporter), member 6 | |
Modification date | 20180522 | 20180519 | |
UniProtAcc | Q14318 | P48664 | |
Ensembl transtripts involved in fusion gene | ENST00000597960, ENST00000610101, ENST00000596558, ENST00000222308, ENST00000608443, ENST00000453489, | ENST00000430939, ENST00000221742, ENST00000600144, ENST00000598504, ENST00000544886, | |
Fusion gene scores | * DoF score | 10 X 11 X 4=440 | 7 X 3 X 7=147 |
# samples | 11 | 8 | |
** MAII score | log2(11/440*10)=-2 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(8/147*10)=-0.877744249949002 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: FKBP8 [Title/Abstract] AND SLC1A6 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | RV | GBM | TCGA-14-1034-02B | FKBP8 | chr19 | 18644080 | - | SLC1A6 | chr19 | 15061202 | - |
TCGA | RV | GBM | TCGA-14-1034-01A | FKBP8 | chr19 | 18644080 | - | SLC1A6 | chr19 | 15061202 | - |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
Frame-shift | ENST00000597960 | ENST00000430939 | FKBP8 | chr19 | 18644080 | - | SLC1A6 | chr19 | 15061202 | - |
Frame-shift | ENST00000597960 | ENST00000221742 | FKBP8 | chr19 | 18644080 | - | SLC1A6 | chr19 | 15061202 | - |
In-frame | ENST00000597960 | ENST00000600144 | FKBP8 | chr19 | 18644080 | - | SLC1A6 | chr19 | 15061202 | - |
5CDS-intron | ENST00000597960 | ENST00000598504 | FKBP8 | chr19 | 18644080 | - | SLC1A6 | chr19 | 15061202 | - |
5CDS-intron | ENST00000597960 | ENST00000544886 | FKBP8 | chr19 | 18644080 | - | SLC1A6 | chr19 | 15061202 | - |
Frame-shift | ENST00000610101 | ENST00000430939 | FKBP8 | chr19 | 18644080 | - | SLC1A6 | chr19 | 15061202 | - |
In-frame | ENST00000610101 | ENST00000221742 | FKBP8 | chr19 | 18644080 | - | SLC1A6 | chr19 | 15061202 | - |
Frame-shift | ENST00000610101 | ENST00000600144 | FKBP8 | chr19 | 18644080 | - | SLC1A6 | chr19 | 15061202 | - |
5CDS-intron | ENST00000610101 | ENST00000598504 | FKBP8 | chr19 | 18644080 | - | SLC1A6 | chr19 | 15061202 | - |
5CDS-intron | ENST00000610101 | ENST00000544886 | FKBP8 | chr19 | 18644080 | - | SLC1A6 | chr19 | 15061202 | - |
Frame-shift | ENST00000596558 | ENST00000430939 | FKBP8 | chr19 | 18644080 | - | SLC1A6 | chr19 | 15061202 | - |
Frame-shift | ENST00000596558 | ENST00000221742 | FKBP8 | chr19 | 18644080 | - | SLC1A6 | chr19 | 15061202 | - |
In-frame | ENST00000596558 | ENST00000600144 | FKBP8 | chr19 | 18644080 | - | SLC1A6 | chr19 | 15061202 | - |
5CDS-intron | ENST00000596558 | ENST00000598504 | FKBP8 | chr19 | 18644080 | - | SLC1A6 | chr19 | 15061202 | - |
5CDS-intron | ENST00000596558 | ENST00000544886 | FKBP8 | chr19 | 18644080 | - | SLC1A6 | chr19 | 15061202 | - |
Frame-shift | ENST00000222308 | ENST00000430939 | FKBP8 | chr19 | 18644080 | - | SLC1A6 | chr19 | 15061202 | - |
In-frame | ENST00000222308 | ENST00000221742 | FKBP8 | chr19 | 18644080 | - | SLC1A6 | chr19 | 15061202 | - |
Frame-shift | ENST00000222308 | ENST00000600144 | FKBP8 | chr19 | 18644080 | - | SLC1A6 | chr19 | 15061202 | - |
5CDS-intron | ENST00000222308 | ENST00000598504 | FKBP8 | chr19 | 18644080 | - | SLC1A6 | chr19 | 15061202 | - |
5CDS-intron | ENST00000222308 | ENST00000544886 | FKBP8 | chr19 | 18644080 | - | SLC1A6 | chr19 | 15061202 | - |
Frame-shift | ENST00000608443 | ENST00000430939 | FKBP8 | chr19 | 18644080 | - | SLC1A6 | chr19 | 15061202 | - |
In-frame | ENST00000608443 | ENST00000221742 | FKBP8 | chr19 | 18644080 | - | SLC1A6 | chr19 | 15061202 | - |
Frame-shift | ENST00000608443 | ENST00000600144 | FKBP8 | chr19 | 18644080 | - | SLC1A6 | chr19 | 15061202 | - |
5CDS-intron | ENST00000608443 | ENST00000598504 | FKBP8 | chr19 | 18644080 | - | SLC1A6 | chr19 | 15061202 | - |
5CDS-intron | ENST00000608443 | ENST00000544886 | FKBP8 | chr19 | 18644080 | - | SLC1A6 | chr19 | 15061202 | - |
In-frame | ENST00000453489 | ENST00000430939 | FKBP8 | chr19 | 18644080 | - | SLC1A6 | chr19 | 15061202 | - |
Frame-shift | ENST00000453489 | ENST00000221742 | FKBP8 | chr19 | 18644080 | - | SLC1A6 | chr19 | 15061202 | - |
Frame-shift | ENST00000453489 | ENST00000600144 | FKBP8 | chr19 | 18644080 | - | SLC1A6 | chr19 | 15061202 | - |
5CDS-intron | ENST00000453489 | ENST00000598504 | FKBP8 | chr19 | 18644080 | - | SLC1A6 | chr19 | 15061202 | - |
5CDS-intron | ENST00000453489 | ENST00000544886 | FKBP8 | chr19 | 18644080 | - | SLC1A6 | chr19 | 15061202 | - |
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FusionProtFeatures for FKBP8_SLC1A6 |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
FKBP8 | SLC1A6 |
Constitutively inactive PPiase, which becomes activewhen bound to calmodulin and calcium. Seems to act as a chaperonefor BCL2, targets it to the mitochondria and modulates itsphosphorylation state. The BCL2/FKBP8/calmodulin/calcium complexprobably interferes with the binding of BCL2 to its targets. Theactive form of FKBP8 may therefore play a role in the regulationof apoptosis. {ECO:0000269|PubMed:12510191,ECO:0000269|PubMed:15757646, ECO:0000269|PubMed:16176796}. | Sodium-dependent, high-affinity amino acid transporterthat mediates the uptake of L-glutamate and also L-aspartate andD-aspartate (PubMed:7791878). Functions as a symporter thattransports one amino acid molecule together with two or threeNa(+) ions and one proton, in parallel with the counter-transportof one K(+) ion. Mediates Cl(-) flux that is not coupled to aminoacid transport; this avoids the accumulation of negative chargesdue to aspartate and Na(+) symport (By similarity). Plays aredundant role in the rapid removal of released glutamate from thesynaptic cleft, which is essential for terminating thepostsynaptic action of glutamate (Probable).{ECO:0000250|UniProtKB:O35921, ECO:0000269|PubMed:7791878,ECO:0000305}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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FusionGeneSequence for FKBP8_SLC1A6 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_FKBP8_ENST00000597960_chr19_18644080_-_SLC1A6_ENST00000600144_chr19_15061202_-_406aa MASCAEPSEPSAPLPAGVPPLEDFEVLDGVEDAEGEEEEEEEEEEEDDLSELPPLEDMGQPPAEEAEQPGALAREFLAAMEPEPAPAPAP EEWLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEEPELVFTLGDCDVIQALDLSVPLMDVGETAMVTADSKYCYG PQGSRSPYIPPHAALCLEVTLKTAVDGPDLEMLTGQERVALANRKRECGNAHYQRADFVLAANSYDLAIKAITSSAKVDMTFEEEAQLLQ LKVKCLNNLAASQLKLDHYRAALRSCSLVLEHQPDNIKALFRKGKVLAQQGEYSEAIPILRAALKLEPSNKXPASHNDQRTGGLNWSGRH >In-frame_FKBP8_ENST00000610101_chr19_18644080_-_SLC1A6_ENST00000221742_chr19_15061202_-_246aa MASCAEPSEPSAPLPAGVPPLEDFEVLDGVEDAEGEEEEEEEEEEEDDLSELPPLEDMGQPPAEEAEQPGALAREFLAAMEPEPAPAPAP EEWLDILVDMTFEEEAQLLQLKVKCLNNLAASQLKLDHYRAALRSCSLVLEHQPDNIKALFRKGKVLAQQGEYSEAIPILRAALKLEPSN >In-frame_FKBP8_ENST00000596558_chr19_18644080_-_SLC1A6_ENST00000600144_chr19_15061202_-_405aa MASCAEPSEPSAPLPAGVPPLEDFEVLDGVEDAEGEEEEEEEEEEEDDLSELPPLEDMGQPPAEEAEQPGALAREFLAAMEPEPAPAPAP EEWLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEEPELVFTLGDCDVIQALDLSVPLMDVGETAMVTADSKYCYG PQGRSPYIPPHAALCLEVTLKTAVDGPDLEMLTGQERVALANRKRECGNAHYQRADFVLAANSYDLAIKAITSSAKVDMTFEEEAQLLQL KVKCLNNLAASQLKLDHYRAALRSCSLVLEHQPDNIKALFRKGKVLAQQGEYSEAIPILRAALKLEPSNKXPASHNDQRTGGLNWSGRHR >In-frame_FKBP8_ENST00000222308_chr19_18644080_-_SLC1A6_ENST00000221742_chr19_15061202_-_405aa MASCAEPSEPSAPLPAGVPPLEDFEVLDGVEDAEGEEEEEEEEEEEDDLSELPPLEDMGQPPAEEAEQPGALAREFLAAMEPEPAPAPAP EEWLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEEPELVFTLGDCDVIQALDLSVPLMDVGETAMVTADSKYCYG PQGRSPYIPPHAALCLEVTLKTAVDGPDLEMLTGQERVALANRKRECGNAHYQRADFVLAANSYDLAIKAITSSAKVDMTFEEEAQLLQL KVKCLNNLAASQLKLDHYRAALRSCSLVLEHQPDNIKALFRKGKVLAQQGEYSEAIPILRAALKLEPSNKXPASHNDQRTGGLNWSGRHR >In-frame_FKBP8_ENST00000608443_chr19_18644080_-_SLC1A6_ENST00000221742_chr19_15061202_-_406aa MASCAEPSEPSAPLPAGVPPLEDFEVLDGVEDAEGEEEEEEEEEEEDDLSELPPLEDMGQPPAEEAEQPGALAREFLAAMEPEPAPAPAP EEWLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEEPELVFTLGDCDVIQALDLSVPLMDVGETAMVTADSKYCYG PQGSRSPYIPPHAALCLEVTLKTAVDGPDLEMLTGQERVALANRKRECGNAHYQRADFVLAANSYDLAIKAITSSAKVDMTFEEEAQLLQ LKVKCLNNLAASQLKLDHYRAALRSCSLVLEHQPDNIKALFRKGKVLAQQGEYSEAIPILRAALKLEPSNKXPASHNDQRTGGLNWSGRH >In-frame_FKBP8_ENST00000453489_chr19_18644080_-_SLC1A6_ENST00000430939_chr19_15061202_-_434aa MGVGAGRVSQSGAPSPGGAGRANSCPPSSMASCAEPSEPSAPLPAGVPPLEDFEVLDGVEDAEGEEEEEEEEEEEDDLSELPPLEDMGQP PAEEAEQPGALAREFLAAMEPEPAPAPAPEEWLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEEPELVFTLGDCD VIQALDLSVPLMDVGETAMVTADSKYCYGPQGRSPYIPPHAALCLEVTLKTAVDGPDLEMLTGQERVALANRKRECGNAHYQRADFVLAA NSYDLAIKAITSSAKVDMTFEEEAQLLQLKVKCLNNLAASQLKLDHYRAALRSCSLVLEHQPDNIKALFRKGKVLAQQGEYSEAIPILRA |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_FKBP8_ENST00000597960_chr19_18644080_-_SLC1A6_ENST00000600144_chr19_15061202_-_1219nt ATGGCATCGTGTGCTGAACCCTCTGAGCCCTCTGCCCCACTGCCCGCCGGGGTCCCACCGCTCGAGGACTTCGAGGTACTGGATGGGGTT GAGGATGCAGAGGGTGAGGAGGAAGAGGAGGAGGAAGAGGAGGAAGAGGATGACCTGAGTGAGCTGCCACCGCTGGAGGACATGGGACAA CCCCCGGCGGAGGAGGCTGAGCAGCCTGGGGCCCTGGCCCGAGAGTTCCTTGCTGCCATGGAGCCCGAGCCCGCCCCAGCCCCGGCCCCA GAAGAGTGGCTGGACATTCTGGGGAACGGGCTGTTGAGGAAGAAGACGCTGGTCCCAGGGCCGCCAGGTTCGAGCCGCCCGGTCAAGGGC CAGGTGGTCACCGTACATCTGCAGACGTCGCTGGAGAATGGCACACGGGTGCAGGAGGAGCCGGAGCTGGTGTTCACTCTGGGTGACTGT GACGTCATCCAGGCCCTGGATCTCAGTGTCCCACTCATGGACGTGGGGGAGACGGCCATGGTCACTGCTGACTCCAAGTACTGCTACGGC CCCCAAGGCAGCAGGAGCCCATACATCCCCCCGCACGCGGCCCTGTGCCTGGAGGTGACCCTGAAGACGGCTGTGGACGGGCCTGACCTG GAGATGCTCACGGGGCAGGAGCGCGTGGCCCTGGCCAACCGGAAGCGGGAGTGCGGCAACGCCCACTACCAGCGGGCGGACTTCGTCCTG GCCGCCAACTCCTACGACCTCGCCATCAAGGCTATCACCTCCAGCGCCAAAGTGGACATGACGTTCGAGGAGGAGGCACAGCTCCTGCAG TTGAAGGTGAAGTGTCTGAACAACCTGGCGGCCTCGCAGCTGAAGCTCGACCACTACCGCGCAGCCCTGCGCTCCTGCAGCCTTGTGCTG GAGCACCAGCCAGACAACATCAAGGCTCTCTTCCGCAAGGGCAAGGTGCTGGCCCAGCAGGGGGAGTACAGTGAGGCCATCCCCATCCTG AGGGCAGCCCTGAAGCTGGAACCTTCCAACAAGTGACCGGCTTCGCACAATGACCAACGTACTGGGGGACTCAATTGGAGCGGCCGTCAT CGAGCACTTGTCTCAGCGGGAGCTGGAGCTTCAGGAAGCTGAGCTTACCCTCCCCAGCCTGGGGAAACCCTACAAGTCCCTCATGGCACA >In-frame_FKBP8_ENST00000610101_chr19_18644080_-_SLC1A6_ENST00000221742_chr19_15061202_-_739nt ATGGCATCGTGTGCTGAACCCTCTGAGCCCTCTGCCCCACTGCCCGCCGGGGTCCCACCGCTCGAGGACTTCGAGGTACTGGATGGGGTT GAGGATGCAGAGGGTGAGGAGGAAGAGGAGGAGGAAGAGGAGGAAGAGGATGACCTGAGTGAGCTGCCACCGCTGGAGGACATGGGACAA CCCCCGGCGGAGGAGGCTGAGCAGCCTGGGGCCCTGGCCCGAGAGTTCCTTGCTGCCATGGAGCCCGAGCCCGCCCCAGCCCCGGCCCCA GAAGAGTGGCTGGACATTCTGGTGGACATGACGTTCGAGGAGGAGGCACAGCTCCTGCAGTTGAAGGTGAAGTGTCTGAACAACCTGGCG GCCTCGCAGCTGAAGCTCGACCACTACCGCGCAGCCCTGCGCTCCTGCAGCCTTGTGCTGGAGCACCAGCCAGACAACATCAAGGCTCTC TTCCGCAAGGGCAAGGTGCTGGCCCAGCAGGGGGAGTACAGTGAGGCCATCCCCATCCTGAGGGCAGCCCTGAAGCTGGAACCTTCCAAC AAGTGACCGGCTTCGCACAATGACCAACGTACTGGGGGACTCAATTGGAGCGGCCGTCATCGAGCACTTGTCTCAGCGGGAGCTGGAGCT TCAGGAAGCTGAGCTTACCCTCCCCAGCCTGGGGAAACCCTACAAGTCCCTCATGGCACAGGAGAAGGGGGCATCCCGGGGACGGGGAGG >In-frame_FKBP8_ENST00000596558_chr19_18644080_-_SLC1A6_ENST00000600144_chr19_15061202_-_1216nt ATGGCATCGTGTGCTGAACCCTCTGAGCCCTCTGCCCCACTGCCCGCCGGGGTCCCACCGCTCGAGGACTTCGAGGTACTGGATGGGGTT GAGGATGCAGAGGGTGAGGAGGAAGAGGAGGAGGAAGAGGAGGAAGAGGATGACCTGAGTGAGCTGCCACCGCTGGAGGACATGGGACAA CCCCCGGCGGAGGAGGCTGAGCAGCCTGGGGCCCTGGCCCGAGAGTTCCTTGCTGCCATGGAGCCCGAGCCCGCCCCAGCCCCGGCCCCA GAAGAGTGGCTGGACATTCTGGGGAACGGGCTGTTGAGGAAGAAGACGCTGGTCCCAGGGCCGCCAGGTTCGAGCCGCCCGGTCAAGGGC CAGGTGGTCACCGTACATCTGCAGACGTCGCTGGAGAATGGCACACGGGTGCAGGAGGAGCCGGAGCTGGTGTTCACTCTGGGTGACTGT GACGTCATCCAGGCCCTGGATCTCAGTGTCCCACTCATGGACGTGGGGGAGACGGCCATGGTCACTGCTGACTCCAAGTACTGCTACGGC CCCCAAGGCAGGAGCCCATACATCCCCCCGCACGCGGCCCTGTGCCTGGAGGTGACCCTGAAGACGGCTGTGGACGGGCCTGACCTGGAG ATGCTCACGGGGCAGGAGCGCGTGGCCCTGGCCAACCGGAAGCGGGAGTGCGGCAACGCCCACTACCAGCGGGCGGACTTCGTCCTGGCC GCCAACTCCTACGACCTCGCCATCAAGGCTATCACCTCCAGCGCCAAAGTGGACATGACGTTCGAGGAGGAGGCACAGCTCCTGCAGTTG AAGGTGAAGTGTCTGAACAACCTGGCGGCCTCGCAGCTGAAGCTCGACCACTACCGCGCAGCCCTGCGCTCCTGCAGCCTTGTGCTGGAG CACCAGCCAGACAACATCAAGGCTCTCTTCCGCAAGGGCAAGGTGCTGGCCCAGCAGGGGGAGTACAGTGAGGCCATCCCCATCCTGAGG GCAGCCCTGAAGCTGGAACCTTCCAACAAGTGACCGGCTTCGCACAATGACCAACGTACTGGGGGACTCAATTGGAGCGGCCGTCATCGA GCACTTGTCTCAGCGGGAGCTGGAGCTTCAGGAAGCTGAGCTTACCCTCCCCAGCCTGGGGAAACCCTACAAGTCCCTCATGGCACAGGA >In-frame_FKBP8_ENST00000222308_chr19_18644080_-_SLC1A6_ENST00000221742_chr19_15061202_-_1216nt ATGGCATCGTGTGCTGAACCCTCTGAGCCCTCTGCCCCACTGCCCGCCGGGGTCCCACCGCTCGAGGACTTCGAGGTACTGGATGGGGTT GAGGATGCAGAGGGTGAGGAGGAAGAGGAGGAGGAAGAGGAGGAAGAGGATGACCTGAGTGAGCTGCCACCGCTGGAGGACATGGGACAA CCCCCGGCGGAGGAGGCTGAGCAGCCTGGGGCCCTGGCCCGAGAGTTCCTTGCTGCCATGGAGCCCGAGCCCGCCCCAGCCCCGGCCCCA GAAGAGTGGCTGGACATTCTGGGGAACGGGCTGTTGAGGAAGAAGACGCTGGTCCCAGGGCCGCCAGGTTCGAGCCGCCCGGTCAAGGGC CAGGTGGTCACCGTACATCTGCAGACGTCGCTGGAGAATGGCACACGGGTGCAGGAGGAGCCGGAGCTGGTGTTCACTCTGGGTGACTGT GACGTCATCCAGGCCCTGGATCTCAGTGTCCCACTCATGGACGTGGGGGAGACGGCCATGGTCACTGCTGACTCCAAGTACTGCTACGGC CCCCAAGGCAGGAGCCCATACATCCCCCCGCACGCGGCCCTGTGCCTGGAGGTGACCCTGAAGACGGCTGTGGACGGGCCTGACCTGGAG ATGCTCACGGGGCAGGAGCGCGTGGCCCTGGCCAACCGGAAGCGGGAGTGCGGCAACGCCCACTACCAGCGGGCGGACTTCGTCCTGGCC GCCAACTCCTACGACCTCGCCATCAAGGCTATCACCTCCAGCGCCAAAGTGGACATGACGTTCGAGGAGGAGGCACAGCTCCTGCAGTTG AAGGTGAAGTGTCTGAACAACCTGGCGGCCTCGCAGCTGAAGCTCGACCACTACCGCGCAGCCCTGCGCTCCTGCAGCCTTGTGCTGGAG CACCAGCCAGACAACATCAAGGCTCTCTTCCGCAAGGGCAAGGTGCTGGCCCAGCAGGGGGAGTACAGTGAGGCCATCCCCATCCTGAGG GCAGCCCTGAAGCTGGAACCTTCCAACAAGTGACCGGCTTCGCACAATGACCAACGTACTGGGGGACTCAATTGGAGCGGCCGTCATCGA GCACTTGTCTCAGCGGGAGCTGGAGCTTCAGGAAGCTGAGCTTACCCTCCCCAGCCTGGGGAAACCCTACAAGTCCCTCATGGCACAGGA >In-frame_FKBP8_ENST00000608443_chr19_18644080_-_SLC1A6_ENST00000221742_chr19_15061202_-_1219nt ATGGCATCGTGTGCTGAACCCTCTGAGCCCTCTGCCCCACTGCCCGCCGGGGTCCCACCGCTCGAGGACTTCGAGGTACTGGATGGGGTT GAGGATGCAGAGGGTGAGGAGGAAGAGGAGGAGGAAGAGGAGGAAGAGGATGACCTGAGTGAGCTGCCACCGCTGGAGGACATGGGACAA CCCCCGGCGGAGGAGGCTGAGCAGCCTGGGGCCCTGGCCCGAGAGTTCCTTGCTGCCATGGAGCCCGAGCCCGCCCCAGCCCCGGCCCCA GAAGAGTGGCTGGACATTCTGGGGAACGGGCTGTTGAGGAAGAAGACGCTGGTCCCAGGGCCGCCAGGTTCGAGCCGCCCGGTCAAGGGC CAGGTGGTCACCGTACATCTGCAGACGTCGCTGGAGAATGGCACACGGGTGCAGGAGGAGCCGGAGCTGGTGTTCACTCTGGGTGACTGT GACGTCATCCAGGCCCTGGATCTCAGTGTCCCACTCATGGACGTGGGGGAGACGGCCATGGTCACTGCTGACTCCAAGTACTGCTACGGC CCCCAAGGCAGCAGGAGCCCATACATCCCCCCGCACGCGGCCCTGTGCCTGGAGGTGACCCTGAAGACGGCTGTGGACGGGCCTGACCTG GAGATGCTCACGGGGCAGGAGCGCGTGGCCCTGGCCAACCGGAAGCGGGAGTGCGGCAACGCCCACTACCAGCGGGCGGACTTCGTCCTG GCCGCCAACTCCTACGACCTCGCCATCAAGGCTATCACCTCCAGCGCCAAAGTGGACATGACGTTCGAGGAGGAGGCACAGCTCCTGCAG TTGAAGGTGAAGTGTCTGAACAACCTGGCGGCCTCGCAGCTGAAGCTCGACCACTACCGCGCAGCCCTGCGCTCCTGCAGCCTTGTGCTG GAGCACCAGCCAGACAACATCAAGGCTCTCTTCCGCAAGGGCAAGGTGCTGGCCCAGCAGGGGGAGTACAGTGAGGCCATCCCCATCCTG AGGGCAGCCCTGAAGCTGGAACCTTCCAACAAGTGACCGGCTTCGCACAATGACCAACGTACTGGGGGACTCAATTGGAGCGGCCGTCAT CGAGCACTTGTCTCAGCGGGAGCTGGAGCTTCAGGAAGCTGAGCTTACCCTCCCCAGCCTGGGGAAACCCTACAAGTCCCTCATGGCACA >In-frame_FKBP8_ENST00000453489_chr19_18644080_-_SLC1A6_ENST00000430939_chr19_15061202_-_1303nt ATGGGGGTGGGGGCTGGGAGGGTCTCTCAAAGTGGGGCTCCGAGCCCGGGAGGAGCAGGCAGGGCCAATTCCTGTCCCCCCAGCAGCATG GCATCGTGTGCTGAACCCTCTGAGCCCTCTGCCCCACTGCCCGCCGGGGTCCCACCGCTCGAGGACTTCGAGGTACTGGATGGGGTTGAG GATGCAGAGGGTGAGGAGGAAGAGGAGGAGGAAGAGGAGGAAGAGGATGACCTGAGTGAGCTGCCACCGCTGGAGGACATGGGACAACCC CCGGCGGAGGAGGCTGAGCAGCCTGGGGCCCTGGCCCGAGAGTTCCTTGCTGCCATGGAGCCCGAGCCCGCCCCAGCCCCGGCCCCAGAA GAGTGGCTGGACATTCTGGGGAACGGGCTGTTGAGGAAGAAGACGCTGGTCCCAGGGCCGCCAGGTTCGAGCCGCCCGGTCAAGGGCCAG GTGGTCACCGTACATCTGCAGACGTCGCTGGAGAATGGCACACGGGTGCAGGAGGAGCCGGAGCTGGTGTTCACTCTGGGTGACTGTGAC GTCATCCAGGCCCTGGATCTCAGTGTCCCACTCATGGACGTGGGGGAGACGGCCATGGTCACTGCTGACTCCAAGTACTGCTACGGCCCC CAAGGCAGGAGCCCATACATCCCCCCGCACGCGGCCCTGTGCCTGGAGGTGACCCTGAAGACGGCTGTGGACGGGCCTGACCTGGAGATG CTCACGGGGCAGGAGCGCGTGGCCCTGGCCAACCGGAAGCGGGAGTGCGGCAACGCCCACTACCAGCGGGCGGACTTCGTCCTGGCCGCC AACTCCTACGACCTCGCCATCAAGGCTATCACCTCCAGCGCCAAAGTGGACATGACGTTCGAGGAGGAGGCACAGCTCCTGCAGTTGAAG GTGAAGTGTCTGAACAACCTGGCGGCCTCGCAGCTGAAGCTCGACCACTACCGCGCAGCCCTGCGCTCCTGCAGCCTTGTGCTGGAGCAC CAGCCAGACAACATCAAGGCTCTCTTCCGCAAGGGCAAGGTGCTGGCCCAGCAGGGGGAGTACAGTGAGGCCATCCCCATCCTGAGGGCA GCCCTGAAGCTGGAACCTTCCAACAAGTGACCGGCTTCGCACAATGACCAACGTACTGGGGGACTCAATTGGAGCGGCCGTCATCGAGCA CTTGTCTCAGCGGGAGCTGGAGCTTCAGGAAGCTGAGCTTACCCTCCCCAGCCTGGGGAAACCCTACAAGTCCCTCATGGCACAGGAGAA |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_FKBP8_ENST00000597960_chr19_18644080_-_SLC1A6_ENST00000600144_chr19_15061202_-_1340nt AAGCGGCCGAACCTGGTTCCCGAGGCGCGGCGGCCGCGGCTGGGGGCGGGGAGGGGGGCGCAGGACCCCAAGTGGGGGTCCCGGAGCCAG AGGCAAGGCCAATTCCTGTCCCCCCAGCAGCATGGCATCGTGTGCTGAACCCTCTGAGCCCTCTGCCCCACTGCCCGCCGGGGTCCCACC GCTCGAGGACTTCGAGGTACTGGATGGGGTTGAGGATGCAGAGGGTGAGGAGGAAGAGGAGGAGGAAGAGGAGGAAGAGGATGACCTGAG TGAGCTGCCACCGCTGGAGGACATGGGACAACCCCCGGCGGAGGAGGCTGAGCAGCCTGGGGCCCTGGCCCGAGAGTTCCTTGCTGCCAT GGAGCCCGAGCCCGCCCCAGCCCCGGCCCCAGAAGAGTGGCTGGACATTCTGGGGAACGGGCTGTTGAGGAAGAAGACGCTGGTCCCAGG GCCGCCAGGTTCGAGCCGCCCGGTCAAGGGCCAGGTGGTCACCGTACATCTGCAGACGTCGCTGGAGAATGGCACACGGGTGCAGGAGGA GCCGGAGCTGGTGTTCACTCTGGGTGACTGTGACGTCATCCAGGCCCTGGATCTCAGTGTCCCACTCATGGACGTGGGGGAGACGGCCAT GGTCACTGCTGACTCCAAGTACTGCTACGGCCCCCAAGGCAGCAGGAGCCCATACATCCCCCCGCACGCGGCCCTGTGCCTGGAGGTGAC CCTGAAGACGGCTGTGGACGGGCCTGACCTGGAGATGCTCACGGGGCAGGAGCGCGTGGCCCTGGCCAACCGGAAGCGGGAGTGCGGCAA CGCCCACTACCAGCGGGCGGACTTCGTCCTGGCCGCCAACTCCTACGACCTCGCCATCAAGGCTATCACCTCCAGCGCCAAAGTGGACAT GACGTTCGAGGAGGAGGCACAGCTCCTGCAGTTGAAGGTGAAGTGTCTGAACAACCTGGCGGCCTCGCAGCTGAAGCTCGACCACTACCG CGCAGCCCTGCGCTCCTGCAGCCTTGTGCTGGAGCACCAGCCAGACAACATCAAGGCTCTCTTCCGCAAGGGCAAGGTGCTGGCCCAGCA GGGGGAGTACAGTGAGGCCATCCCCATCCTGAGGGCAGCCCTGAAGCTGGAACCTTCCAACAAGTGACCGGCTTCGCACAATGACCAACG TACTGGGGGACTCAATTGGAGCGGCCGTCATCGAGCACTTGTCTCAGCGGGAGCTGGAGCTTCAGGAAGCTGAGCTTACCCTCCCCAGCC >In-frame_FKBP8_ENST00000610101_chr19_18644080_-_SLC1A6_ENST00000221742_chr19_15061202_-_868nt GGCCGAACCTGGTTCCCGAGGCGCGGCGGCCGCGGCTGGGGGCGGGGAGGGGGGCGCAGGACCCCAAGTGGGGGTCCCGGAGCCAGAGGG CCAATTCCTGTCCCCCCAGCAGCATGGCATCGTGTGCTGAACCCTCTGAGCCCTCTGCCCCACTGCCCGCCGGGGTCCCACCGCTCGAGG ACTTCGAGGTACTGGATGGGGTTGAGGATGCAGAGGGTGAGGAGGAAGAGGAGGAGGAAGAGGAGGAAGAGGATGACCTGAGTGAGCTGC CACCGCTGGAGGACATGGGACAACCCCCGGCGGAGGAGGCTGAGCAGCCTGGGGCCCTGGCCCGAGAGTTCCTTGCTGCCATGGAGCCCG AGCCCGCCCCAGCCCCGGCCCCAGAAGAGTGGCTGGACATTCTGGTGGACATGACGTTCGAGGAGGAGGCACAGCTCCTGCAGTTGAAGG TGAAGTGTCTGAACAACCTGGCGGCCTCGCAGCTGAAGCTCGACCACTACCGCGCAGCCCTGCGCTCCTGCAGCCTTGTGCTGGAGCACC AGCCAGACAACATCAAGGCTCTCTTCCGCAAGGGCAAGGTGCTGGCCCAGCAGGGGGAGTACAGTGAGGCCATCCCCATCCTGAGGGCAG CCCTGAAGCTGGAACCTTCCAACAAGTGACCGGCTTCGCACAATGACCAACGTACTGGGGGACTCAATTGGAGCGGCCGTCATCGAGCAC TTGTCTCAGCGGGAGCTGGAGCTTCAGGAAGCTGAGCTTACCCTCCCCAGCCTGGGGAAACCCTACAAGTCCCTCATGGCACAGGAGAAG >In-frame_FKBP8_ENST00000596558_chr19_18644080_-_SLC1A6_ENST00000600144_chr19_15061202_-_1326nt GAATTGTGCGGGCGCGGGGAATTATGGGGGTGGGGGCTGGGAGGGTCTCTCAAAGTGGGGCTCCGAGCCCGGGAGGAGCAGGCAGGGCCA ATTCCTGTCCCCCCAGCAGCATGGCATCGTGTGCTGAACCCTCTGAGCCCTCTGCCCCACTGCCCGCCGGGGTCCCACCGCTCGAGGACT TCGAGGTACTGGATGGGGTTGAGGATGCAGAGGGTGAGGAGGAAGAGGAGGAGGAAGAGGAGGAAGAGGATGACCTGAGTGAGCTGCCAC CGCTGGAGGACATGGGACAACCCCCGGCGGAGGAGGCTGAGCAGCCTGGGGCCCTGGCCCGAGAGTTCCTTGCTGCCATGGAGCCCGAGC CCGCCCCAGCCCCGGCCCCAGAAGAGTGGCTGGACATTCTGGGGAACGGGCTGTTGAGGAAGAAGACGCTGGTCCCAGGGCCGCCAGGTT CGAGCCGCCCGGTCAAGGGCCAGGTGGTCACCGTACATCTGCAGACGTCGCTGGAGAATGGCACACGGGTGCAGGAGGAGCCGGAGCTGG TGTTCACTCTGGGTGACTGTGACGTCATCCAGGCCCTGGATCTCAGTGTCCCACTCATGGACGTGGGGGAGACGGCCATGGTCACTGCTG ACTCCAAGTACTGCTACGGCCCCCAAGGCAGGAGCCCATACATCCCCCCGCACGCGGCCCTGTGCCTGGAGGTGACCCTGAAGACGGCTG TGGACGGGCCTGACCTGGAGATGCTCACGGGGCAGGAGCGCGTGGCCCTGGCCAACCGGAAGCGGGAGTGCGGCAACGCCCACTACCAGC GGGCGGACTTCGTCCTGGCCGCCAACTCCTACGACCTCGCCATCAAGGCTATCACCTCCAGCGCCAAAGTGGACATGACGTTCGAGGAGG AGGCACAGCTCCTGCAGTTGAAGGTGAAGTGTCTGAACAACCTGGCGGCCTCGCAGCTGAAGCTCGACCACTACCGCGCAGCCCTGCGCT CCTGCAGCCTTGTGCTGGAGCACCAGCCAGACAACATCAAGGCTCTCTTCCGCAAGGGCAAGGTGCTGGCCCAGCAGGGGGAGTACAGTG AGGCCATCCCCATCCTGAGGGCAGCCCTGAAGCTGGAACCTTCCAACAAGTGACCGGCTTCGCACAATGACCAACGTACTGGGGGACTCA ATTGGAGCGGCCGTCATCGAGCACTTGTCTCAGCGGGAGCTGGAGCTTCAGGAAGCTGAGCTTACCCTCCCCAGCCTGGGGAAACCCTAC >In-frame_FKBP8_ENST00000222308_chr19_18644080_-_SLC1A6_ENST00000221742_chr19_15061202_-_1296nt GGGGGCGCAGGACCCCAAGTGGGGGTCCCGGAGCCAGAGGGCCAATTCCTGTCCCCCCAGCAGCATGGCATCGTGTGCTGAACCCTCTGA GCCCTCTGCCCCACTGCCCGCCGGGGTCCCACCGCTCGAGGACTTCGAGGTACTGGATGGGGTTGAGGATGCAGAGGGTGAGGAGGAAGA GGAGGAGGAAGAGGAGGAAGAGGATGACCTGAGTGAGCTGCCACCGCTGGAGGACATGGGACAACCCCCGGCGGAGGAGGCTGAGCAGCC TGGGGCCCTGGCCCGAGAGTTCCTTGCTGCCATGGAGCCCGAGCCCGCCCCAGCCCCGGCCCCAGAAGAGTGGCTGGACATTCTGGGGAA CGGGCTGTTGAGGAAGAAGACGCTGGTCCCAGGGCCGCCAGGTTCGAGCCGCCCGGTCAAGGGCCAGGTGGTCACCGTACATCTGCAGAC GTCGCTGGAGAATGGCACACGGGTGCAGGAGGAGCCGGAGCTGGTGTTCACTCTGGGTGACTGTGACGTCATCCAGGCCCTGGATCTCAG TGTCCCACTCATGGACGTGGGGGAGACGGCCATGGTCACTGCTGACTCCAAGTACTGCTACGGCCCCCAAGGCAGGAGCCCATACATCCC CCCGCACGCGGCCCTGTGCCTGGAGGTGACCCTGAAGACGGCTGTGGACGGGCCTGACCTGGAGATGCTCACGGGGCAGGAGCGCGTGGC CCTGGCCAACCGGAAGCGGGAGTGCGGCAACGCCCACTACCAGCGGGCGGACTTCGTCCTGGCCGCCAACTCCTACGACCTCGCCATCAA GGCTATCACCTCCAGCGCCAAAGTGGACATGACGTTCGAGGAGGAGGCACAGCTCCTGCAGTTGAAGGTGAAGTGTCTGAACAACCTGGC GGCCTCGCAGCTGAAGCTCGACCACTACCGCGCAGCCCTGCGCTCCTGCAGCCTTGTGCTGGAGCACCAGCCAGACAACATCAAGGCTCT CTTCCGCAAGGGCAAGGTGCTGGCCCAGCAGGGGGAGTACAGTGAGGCCATCCCCATCCTGAGGGCAGCCCTGAAGCTGGAACCTTCCAA CAAGTGACCGGCTTCGCACAATGACCAACGTACTGGGGGACTCAATTGGAGCGGCCGTCATCGAGCACTTGTCTCAGCGGGAGCTGGAGC TTCAGGAAGCTGAGCTTACCCTCCCCAGCCTGGGGAAACCCTACAAGTCCCTCATGGCACAGGAGAAGGGGGCATCCCGGGGACGGGGAG >In-frame_FKBP8_ENST00000608443_chr19_18644080_-_SLC1A6_ENST00000221742_chr19_15061202_-_1435nt ACGCCCGGGACGGACGTCTGCATGAGCCAACGGGTGCGGCAGTCGCGGCAGCGGCGGCCAATGGGCACGGCAGGGGCGGGGCCAAGCGGC CGAACCTGGTTCCCGAGGCGCGGCGGCCGCGGCTGGGGGCGGGGAGGGGGGCGCAGGACCCCAAGTGGGGGTCCCGGAGCCAGAGGGCCA ATTCCTGTCCCCCCAGCAGCATGGCATCGTGTGCTGAACCCTCTGAGCCCTCTGCCCCACTGCCCGCCGGGGTCCCACCGCTCGAGGACT TCGAGGTACTGGATGGGGTTGAGGATGCAGAGGGTGAGGAGGAAGAGGAGGAGGAAGAGGAGGAAGAGGATGACCTGAGTGAGCTGCCAC CGCTGGAGGACATGGGACAACCCCCGGCGGAGGAGGCTGAGCAGCCTGGGGCCCTGGCCCGAGAGTTCCTTGCTGCCATGGAGCCCGAGC CCGCCCCAGCCCCGGCCCCAGAAGAGTGGCTGGACATTCTGGGGAACGGGCTGTTGAGGAAGAAGACGCTGGTCCCAGGGCCGCCAGGTT CGAGCCGCCCGGTCAAGGGCCAGGTGGTCACCGTACATCTGCAGACGTCGCTGGAGAATGGCACACGGGTGCAGGAGGAGCCGGAGCTGG TGTTCACTCTGGGTGACTGTGACGTCATCCAGGCCCTGGATCTCAGTGTCCCACTCATGGACGTGGGGGAGACGGCCATGGTCACTGCTG ACTCCAAGTACTGCTACGGCCCCCAAGGCAGCAGGAGCCCATACATCCCCCCGCACGCGGCCCTGTGCCTGGAGGTGACCCTGAAGACGG CTGTGGACGGGCCTGACCTGGAGATGCTCACGGGGCAGGAGCGCGTGGCCCTGGCCAACCGGAAGCGGGAGTGCGGCAACGCCCACTACC AGCGGGCGGACTTCGTCCTGGCCGCCAACTCCTACGACCTCGCCATCAAGGCTATCACCTCCAGCGCCAAAGTGGACATGACGTTCGAGG AGGAGGCACAGCTCCTGCAGTTGAAGGTGAAGTGTCTGAACAACCTGGCGGCCTCGCAGCTGAAGCTCGACCACTACCGCGCAGCCCTGC GCTCCTGCAGCCTTGTGCTGGAGCACCAGCCAGACAACATCAAGGCTCTCTTCCGCAAGGGCAAGGTGCTGGCCCAGCAGGGGGAGTACA GTGAGGCCATCCCCATCCTGAGGGCAGCCCTGAAGCTGGAACCTTCCAACAAGTGACCGGCTTCGCACAATGACCAACGTACTGGGGGAC TCAATTGGAGCGGCCGTCATCGAGCACTTGTCTCAGCGGGAGCTGGAGCTTCAGGAAGCTGAGCTTACCCTCCCCAGCCTGGGGAAACCC >In-frame_FKBP8_ENST00000453489_chr19_18644080_-_SLC1A6_ENST00000430939_chr19_15061202_-_1487nt GAATTGTGCGGGCGCGGGGAATTATGGGGGTGGGGGCTGGGAGGGTCTCTCAAAGTGGGGCTCCGAGCCCGGGAGGAGCAGGCAGGGCCA ATTCCTGTCCCCCCAGCAGCATGGCATCGTGTGCTGAACCCTCTGAGCCCTCTGCCCCACTGCCCGCCGGGGTCCCACCGCTCGAGGACT TCGAGGTACTGGATGGGGTTGAGGATGCAGAGGGTGAGGAGGAAGAGGAGGAGGAAGAGGAGGAAGAGGATGACCTGAGTGAGCTGCCAC CGCTGGAGGACATGGGACAACCCCCGGCGGAGGAGGCTGAGCAGCCTGGGGCCCTGGCCCGAGAGTTCCTTGCTGCCATGGAGCCCGAGC CCGCCCCAGCCCCGGCCCCAGAAGAGTGGCTGGACATTCTGGGGAACGGGCTGTTGAGGAAGAAGACGCTGGTCCCAGGGCCGCCAGGTT CGAGCCGCCCGGTCAAGGGCCAGGTGGTCACCGTACATCTGCAGACGTCGCTGGAGAATGGCACACGGGTGCAGGAGGAGCCGGAGCTGG TGTTCACTCTGGGTGACTGTGACGTCATCCAGGCCCTGGATCTCAGTGTCCCACTCATGGACGTGGGGGAGACGGCCATGGTCACTGCTG ACTCCAAGTACTGCTACGGCCCCCAAGGCAGGAGCCCATACATCCCCCCGCACGCGGCCCTGTGCCTGGAGGTGACCCTGAAGACGGCTG TGGACGGGCCTGACCTGGAGATGCTCACGGGGCAGGAGCGCGTGGCCCTGGCCAACCGGAAGCGGGAGTGCGGCAACGCCCACTACCAGC GGGCGGACTTCGTCCTGGCCGCCAACTCCTACGACCTCGCCATCAAGGCTATCACCTCCAGCGCCAAAGTGGACATGACGTTCGAGGAGG AGGCACAGCTCCTGCAGTTGAAGGTGAAGTGTCTGAACAACCTGGCGGCCTCGCAGCTGAAGCTCGACCACTACCGCGCAGCCCTGCGCT CCTGCAGCCTTGTGCTGGAGCACCAGCCAGACAACATCAAGGCTCTCTTCCGCAAGGGCAAGGTGCTGGCCCAGCAGGGGGAGTACAGTG AGGCCATCCCCATCCTGAGGGCAGCCCTGAAGCTGGAACCTTCCAACAAGTGACCGGCTTCGCACAATGACCAACGTACTGGGGGACTCA ATTGGAGCGGCCGTCATCGAGCACTTGTCTCAGCGGGAGCTGGAGCTTCAGGAAGCTGAGCTTACCCTCCCCAGCCTGGGGAAACCCTAC AAGTCCCTCATGGCACAGGAGAAGGGGGCATCCCGGGGACGGGGAGGCAACGAGAGTGCTATGTGAGGGGCCTCCAGCTCTGCCCCCCCA GAGAGGAGGGAAGGGGGCTGGGGAGGGGAGTCCTGGTGACACATCTGTTGCCCAACTGACCGTGGGCTGAACACACGTTCTGCTTGACTC |
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FusionGenePPI for FKBP8_SLC1A6 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
FKBP8 | BCL2, BCL2L1, USP19, BRE, EGFR, HSP90AA1, CALM1, PSMC1, PSMC2, PSMC3, PSMC4, PSMC5, PSMC6, PSMD1, PSMD2, PSMD3, PSMD4, PSMD6, PSMD7, PSMD11, PSMD12, PSMD13, PSMD14, PSMA1, PSMA2, PSMA3, PSMA4, PSMA5, PSMA6, PSMA7, PSMB1, PSMB2, PSMB3, PSMB5, PSMB7, ADRM1, PTPRK, UBC, TERF1, EGLN1, CUL3, VHL, ATP13A2, SURF1, MRPL11, YME1L1, UQCRC1, UQCRC2, MRPL15, SSR1, UQCRFS1, PGRMC1, DHODH, NDUFB10, TOMM22, ABCC1, NNT, KCNH2, FKBP8, CAMK2A, CLN3, ADRB2, BNIPL, ARHGEF5, CDK20, PDCL, SUGT1, PTGES3, CACYBP, HSPBP1, RHEB, MTOR, MLST8, RPTOR, RICTOR, CCDC8, RPS6KB2, ABCB7, TCTN2, TCTN3, EVC2, TMEM216, MLH1, XRCC3, VAPA, ATP6AP2, COQ9, TMEM258, CLCN1, CUL4A, CUL4B, MTMR11, PTPMT1, ANKMY2 | SLC1A6 | ARIH2 |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for FKBP8_SLC1A6 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Tgene | SLC1A6 | P48664 | DB00142 | Glutamic Acid | Excitatory amino acid transporter 4 | small molecule | approved|nutraceutical |
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RelatedDiseases for FKBP8_SLC1A6 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Tgene | SLC1A6 | C0005586 | Bipolar Disorder | 1 | PSYGENET |
Tgene | SLC1A6 | C0036341 | Schizophrenia | 1 | PSYGENET |
Tgene | SLC1A6 | C0041696 | Unipolar Depression | 1 | PSYGENET |
Tgene | SLC1A6 | C1269683 | Major Depressive Disorder | 1 | PSYGENET |