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Fusion gene ID: 12563 |
FusionGeneSummary for FAM135A_C6orf163 |
Fusion gene summary |
Fusion gene information | Fusion gene name: FAM135A_C6orf163 | Fusion gene ID: 12563 | Hgene | Tgene | Gene symbol | FAM135A | C6orf163 | Gene ID | 57579 | 206412 |
Gene name | family with sequence similarity 135 member A | chromosome 6 open reading frame 163 | |
Synonyms | KIAA1411 | - | |
Cytomap | 6q13 | 6q15 | |
Type of gene | protein-coding | protein-coding | |
Description | protein FAM135A | uncharacterized protein C6orf163 | |
Modification date | 20180523 | 20180519 | |
UniProtAcc | Q9P2D6 | Q5TEZ5 | |
Ensembl transtripts involved in fusion gene | ENST00000418814, ENST00000370479, ENST00000505769, ENST00000457062, ENST00000361499, ENST00000505868, ENST00000508844, | ENST00000388923, ENST00000608326, ENST00000608891, | |
Fusion gene scores | * DoF score | 7 X 5 X 6=210 | 1 X 1 X 1=1 |
# samples | 7 | 1 | |
** MAII score | log2(7/210*10)=-1.58496250072116 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(1/1*10)=3.32192809488736 | |
Context | PubMed: FAM135A [Title/Abstract] AND C6orf163 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | RV | KIRC | TCGA-G6-A8L8-01A | FAM135A | chr6 | 71138122 | + | C6orf163 | chr6 | 88074679 | + |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000418814 | ENST00000388923 | FAM135A | chr6 | 71138122 | + | C6orf163 | chr6 | 88074679 | + |
Frame-shift | ENST00000418814 | ENST00000608326 | FAM135A | chr6 | 71138122 | + | C6orf163 | chr6 | 88074679 | + |
5CDS-3UTR | ENST00000418814 | ENST00000608891 | FAM135A | chr6 | 71138122 | + | C6orf163 | chr6 | 88074679 | + |
In-frame | ENST00000370479 | ENST00000388923 | FAM135A | chr6 | 71138122 | + | C6orf163 | chr6 | 88074679 | + |
Frame-shift | ENST00000370479 | ENST00000608326 | FAM135A | chr6 | 71138122 | + | C6orf163 | chr6 | 88074679 | + |
5CDS-3UTR | ENST00000370479 | ENST00000608891 | FAM135A | chr6 | 71138122 | + | C6orf163 | chr6 | 88074679 | + |
In-frame | ENST00000505769 | ENST00000388923 | FAM135A | chr6 | 71138122 | + | C6orf163 | chr6 | 88074679 | + |
Frame-shift | ENST00000505769 | ENST00000608326 | FAM135A | chr6 | 71138122 | + | C6orf163 | chr6 | 88074679 | + |
5CDS-3UTR | ENST00000505769 | ENST00000608891 | FAM135A | chr6 | 71138122 | + | C6orf163 | chr6 | 88074679 | + |
In-frame | ENST00000457062 | ENST00000388923 | FAM135A | chr6 | 71138122 | + | C6orf163 | chr6 | 88074679 | + |
Frame-shift | ENST00000457062 | ENST00000608326 | FAM135A | chr6 | 71138122 | + | C6orf163 | chr6 | 88074679 | + |
5CDS-3UTR | ENST00000457062 | ENST00000608891 | FAM135A | chr6 | 71138122 | + | C6orf163 | chr6 | 88074679 | + |
In-frame | ENST00000361499 | ENST00000388923 | FAM135A | chr6 | 71138122 | + | C6orf163 | chr6 | 88074679 | + |
Frame-shift | ENST00000361499 | ENST00000608326 | FAM135A | chr6 | 71138122 | + | C6orf163 | chr6 | 88074679 | + |
5CDS-3UTR | ENST00000361499 | ENST00000608891 | FAM135A | chr6 | 71138122 | + | C6orf163 | chr6 | 88074679 | + |
In-frame | ENST00000505868 | ENST00000388923 | FAM135A | chr6 | 71138122 | + | C6orf163 | chr6 | 88074679 | + |
Frame-shift | ENST00000505868 | ENST00000608326 | FAM135A | chr6 | 71138122 | + | C6orf163 | chr6 | 88074679 | + |
5CDS-3UTR | ENST00000505868 | ENST00000608891 | FAM135A | chr6 | 71138122 | + | C6orf163 | chr6 | 88074679 | + |
intron-3CDS | ENST00000508844 | ENST00000388923 | FAM135A | chr6 | 71138122 | + | C6orf163 | chr6 | 88074679 | + |
intron-3CDS | ENST00000508844 | ENST00000608326 | FAM135A | chr6 | 71138122 | + | C6orf163 | chr6 | 88074679 | + |
intron-3UTR | ENST00000508844 | ENST00000608891 | FAM135A | chr6 | 71138122 | + | C6orf163 | chr6 | 88074679 | + |
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FusionProtFeatures for FAM135A_C6orf163 |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
FAM135A | C6orf163 |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | >C6orf163 | chr6:71138122 | chr6:88074679 | ENST00000388923 | + | 3 | 5 | 225_251 | 184 | 330 | Coiled coil | Ontology_term=ECO:0000255 |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | C6orf163 | chr6:71138122 | chr6:88074679 | ENST00000388923 | + | 3 | 5 | 57_120 | 184 | 330 | Coiled coil | Ontology_term=ECO:0000255 |
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FusionGeneSequence for FAM135A_C6orf163 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_FAM135A_ENST00000418814_chr6_71138122_+_C6orf163_ENST00000388923_chr6_88074679_+_171aa MTEVQAMVEFSVELNKFYNVDLFQRGKAVEEIVNTGVTVIKDEKTSVARLMREKEHEMSILYGIAQRQRQEEVQEVLQEAEKTHQATLGN >In-frame_FAM135A_ENST00000370479_chr6_71138122_+_C6orf163_ENST00000388923_chr6_88074679_+_171aa MTEVQAMVEFSVELNKFYNVDLFQRGKAVEEIVNTGVTVIKDEKTSVARLMREKEHEMSILYGIAQRQRQEEVQEVLQEAEKTHQATLGN >In-frame_FAM135A_ENST00000505769_chr6_71138122_+_C6orf163_ENST00000388923_chr6_88074679_+_171aa MTEVQAMVEFSVELNKFYNVDLFQRGKAVEEIVNTGVTVIKDEKTSVARLMREKEHEMSILYGIAQRQRQEEVQEVLQEAEKTHQATLGN >In-frame_FAM135A_ENST00000457062_chr6_71138122_+_C6orf163_ENST00000388923_chr6_88074679_+_171aa MTEVQAMVEFSVELNKFYNVDLFQRGKAVEEIVNTGVTVIKDEKTSVARLMREKEHEMSILYGIAQRQRQEEVQEVLQEAEKTHQATLGN >In-frame_FAM135A_ENST00000361499_chr6_71138122_+_C6orf163_ENST00000388923_chr6_88074679_+_171aa MTEVQAMVEFSVELNKFYNVDLFQRGKAVEEIVNTGVTVIKDEKTSVARLMREKEHEMSILYGIAQRQRQEEVQEVLQEAEKTHQATLGN >In-frame_FAM135A_ENST00000505868_chr6_71138122_+_C6orf163_ENST00000388923_chr6_88074679_+_171aa MTEVQAMVEFSVELNKFYNVDLFQRGKAVEEIVNTGVTVIKDEKTSVARLMREKEHEMSILYGIAQRQRQEEVQEVLQEAEKTHQATLGN |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_FAM135A_ENST00000418814_chr6_71138122_+_C6orf163_ENST00000388923_chr6_88074679_+_513nt ATGACTGAAGTTCAAGCAATGGTAGAATTCTCTGTGGAGCTAAACAAGTTCTACAATGTGGATTTGTTTCAGAGAGGCAAAGCCGTGGAG GAAATTGTGAATACTGGTGTCACAGTTATTAAGGATGAGAAGACCAGTGTGGCCCGACTGATGAGGGAAAAAGAACATGAAATGAGCATC CTCTATGGCATAGCTCAGAGGCAGAGGCAAGAAGAGGTACAGGAAGTGCTTCAAGAAGCAGAGAAAACACATCAGGCCACTCTTGGCAAT ATGATGGATAAACTGGCTAACACCCAGGGGGAGCTGCTGTCTATAGCAAAACAACTGGGAATCATGACAAATTGGAAAGATTTCCTAGAG GAGGAATTACAGGAAACCAGGATGGCATTTCAAAAATACATCAATTATACCTTTCCTAAGCTTTCACCAGGACATGCAGATTTTATTCTG >In-frame_FAM135A_ENST00000370479_chr6_71138122_+_C6orf163_ENST00000388923_chr6_88074679_+_513nt ATGACTGAAGTTCAAGCAATGGTAGAATTCTCTGTGGAGCTAAACAAGTTCTACAATGTGGATTTGTTTCAGAGAGGCAAAGCCGTGGAG GAAATTGTGAATACTGGTGTCACAGTTATTAAGGATGAGAAGACCAGTGTGGCCCGACTGATGAGGGAAAAAGAACATGAAATGAGCATC CTCTATGGCATAGCTCAGAGGCAGAGGCAAGAAGAGGTACAGGAAGTGCTTCAAGAAGCAGAGAAAACACATCAGGCCACTCTTGGCAAT ATGATGGATAAACTGGCTAACACCCAGGGGGAGCTGCTGTCTATAGCAAAACAACTGGGAATCATGACAAATTGGAAAGATTTCCTAGAG GAGGAATTACAGGAAACCAGGATGGCATTTCAAAAATACATCAATTATACCTTTCCTAAGCTTTCACCAGGACATGCAGATTTTATTCTG >In-frame_FAM135A_ENST00000505769_chr6_71138122_+_C6orf163_ENST00000388923_chr6_88074679_+_513nt ATGACTGAAGTTCAAGCAATGGTAGAATTCTCTGTGGAGCTAAACAAGTTCTACAATGTGGATTTGTTTCAGAGAGGCAAAGCCGTGGAG GAAATTGTGAATACTGGTGTCACAGTTATTAAGGATGAGAAGACCAGTGTGGCCCGACTGATGAGGGAAAAAGAACATGAAATGAGCATC CTCTATGGCATAGCTCAGAGGCAGAGGCAAGAAGAGGTACAGGAAGTGCTTCAAGAAGCAGAGAAAACACATCAGGCCACTCTTGGCAAT ATGATGGATAAACTGGCTAACACCCAGGGGGAGCTGCTGTCTATAGCAAAACAACTGGGAATCATGACAAATTGGAAAGATTTCCTAGAG GAGGAATTACAGGAAACCAGGATGGCATTTCAAAAATACATCAATTATACCTTTCCTAAGCTTTCACCAGGACATGCAGATTTTATTCTG >In-frame_FAM135A_ENST00000457062_chr6_71138122_+_C6orf163_ENST00000388923_chr6_88074679_+_513nt ATGACTGAAGTTCAAGCAATGGTAGAATTCTCTGTGGAGCTAAACAAGTTCTACAATGTGGATTTGTTTCAGAGAGGCAAAGCCGTGGAG GAAATTGTGAATACTGGTGTCACAGTTATTAAGGATGAGAAGACCAGTGTGGCCCGACTGATGAGGGAAAAAGAACATGAAATGAGCATC CTCTATGGCATAGCTCAGAGGCAGAGGCAAGAAGAGGTACAGGAAGTGCTTCAAGAAGCAGAGAAAACACATCAGGCCACTCTTGGCAAT ATGATGGATAAACTGGCTAACACCCAGGGGGAGCTGCTGTCTATAGCAAAACAACTGGGAATCATGACAAATTGGAAAGATTTCCTAGAG GAGGAATTACAGGAAACCAGGATGGCATTTCAAAAATACATCAATTATACCTTTCCTAAGCTTTCACCAGGACATGCAGATTTTATTCTG >In-frame_FAM135A_ENST00000361499_chr6_71138122_+_C6orf163_ENST00000388923_chr6_88074679_+_513nt ATGACTGAAGTTCAAGCAATGGTAGAATTCTCTGTGGAGCTAAACAAGTTCTACAATGTGGATTTGTTTCAGAGAGGCAAAGCCGTGGAG GAAATTGTGAATACTGGTGTCACAGTTATTAAGGATGAGAAGACCAGTGTGGCCCGACTGATGAGGGAAAAAGAACATGAAATGAGCATC CTCTATGGCATAGCTCAGAGGCAGAGGCAAGAAGAGGTACAGGAAGTGCTTCAAGAAGCAGAGAAAACACATCAGGCCACTCTTGGCAAT ATGATGGATAAACTGGCTAACACCCAGGGGGAGCTGCTGTCTATAGCAAAACAACTGGGAATCATGACAAATTGGAAAGATTTCCTAGAG GAGGAATTACAGGAAACCAGGATGGCATTTCAAAAATACATCAATTATACCTTTCCTAAGCTTTCACCAGGACATGCAGATTTTATTCTG >In-frame_FAM135A_ENST00000505868_chr6_71138122_+_C6orf163_ENST00000388923_chr6_88074679_+_513nt ATGACTGAAGTTCAAGCAATGGTAGAATTCTCTGTGGAGCTAAACAAGTTCTACAATGTGGATTTGTTTCAGAGAGGCAAAGCCGTGGAG GAAATTGTGAATACTGGTGTCACAGTTATTAAGGATGAGAAGACCAGTGTGGCCCGACTGATGAGGGAAAAAGAACATGAAATGAGCATC CTCTATGGCATAGCTCAGAGGCAGAGGCAAGAAGAGGTACAGGAAGTGCTTCAAGAAGCAGAGAAAACACATCAGGCCACTCTTGGCAAT ATGATGGATAAACTGGCTAACACCCAGGGGGAGCTGCTGTCTATAGCAAAACAACTGGGAATCATGACAAATTGGAAAGATTTCCTAGAG GAGGAATTACAGGAAACCAGGATGGCATTTCAAAAATACATCAATTATACCTTTCCTAAGCTTTCACCAGGACATGCAGATTTTATTCTG |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_FAM135A_ENST00000418814_chr6_71138122_+_C6orf163_ENST00000388923_chr6_88074679_+_1194nt GCTGGAGGGGCAGTTGAAGCTCCTGAAGGGCGGGGCACGGAGCTTGAAGGGGCGGGGCCTAGCCTCAGAGAGGGGAGGGAAGAGGCGGGA GGAGGAGGTGAGAGAGGCCGGGGGCGGGGCCGTGCGGCCGGGGACCTGTTGATCGCAGGTATAGCCGGCTGGCCCGGGCTCCCTCGGGAC TGGGGCGACTGCGCATGCTCGCTGGCCGCGCTGGGCCAGTAGCCGAGCCGCGGTGACGAACCGGCTCCGCGGTTGCGGTGTTTGCGGTTG CTGTGATGGCGATGTGAGGGGGCCCGGGGCGGGATGGTGCTGACCCGGGTCGGGCCGTCTTCTTGCAGCTGGACAACGAGCTCCTCCGTT CGACAGGCGGGGGAAGAGGCCGAGCCGGGCGAGAGGGTTGAAGATCAACTGGATTATGTATTTGGTTCTGGAATCTCAAAGCAGTCCACA AACAAATTCTTCCTTATGTTGTCTGTGTCAGGGGGAACGGTGTATTTTTAACAACGGGAATCAGTAACTGGAAGTACAAGATTGGTTATT TAATAATGTTAAAAATGAGGCTTTGAAAAGCAGAGGTGCTGTTATCAGAATAGTCTTCTGGGTATAAATTAAAAATGACTGAAGTTCAAG CAATGGTAGAATTCTCTGTGGAGCTAAACAAGTTCTACAATGTGGATTTGTTTCAGAGAGGCAAAGCCGTGGAGGAAATTGTGAATACTG GTGTCACAGTTATTAAGGATGAGAAGACCAGTGTGGCCCGACTGATGAGGGAAAAAGAACATGAAATGAGCATCCTCTATGGCATAGCTC AGAGGCAGAGGCAAGAAGAGGTACAGGAAGTGCTTCAAGAAGCAGAGAAAACACATCAGGCCACTCTTGGCAATATGATGGATAAACTGG CTAACACCCAGGGGGAGCTGCTGTCTATAGCAAAACAACTGGGAATCATGACAAATTGGAAAGATTTCCTAGAGGAGGAATTACAGGAAA CCAGGATGGCATTTCAAAAATACATCAATTATACCTTTCCTAAGCTTTCACCAGGACATGCAGATTTTATTCTGCCAGAAAGAAAGAAAA CACCTTCTAATCTTGTTATTAAGGAGAACAAAACAACTCTTGATTAGAAGTCTTCAGTTGAAATTCCACTACAAAAGACATCATTCCAGA >In-frame_FAM135A_ENST00000370479_chr6_71138122_+_C6orf163_ENST00000388923_chr6_88074679_+_1098nt GGTGAGAGAGGCCGGGGGCGGGGCCGTGCGGCCGGGGACCTGTTGATCGCAGGTATAGCCGGCTGGCCCGGGCTCCCTCGGGACTGGGGC GACTGCGCATGCTCGCTGGCCGCGCTGGGCCAGTAGCCGAGCCGCGGTGACGAACCGGCTCCGCGGTTGCGGTGTTTGCGGTTGCTGTGA TGGCGATGTGAGGGGGCCCGGGGCGGGATGGTGCTGACCCGGGTCGGGCCGTCTTCTTGCAGCTGGACAACGAGCTCCTCCGTTCGACAG GCGGGGGAAGAGGCCGAGCCGGGCGAGAGGGTTGAAGATCAACTGGATTATGTATTTGGTTCTGGAATCTCAAAGCAGTCCACAAACAAA TTCTTCCTTATGTTGTCTGTGTCAGGGGGAACGGTGTATTTTTAACAACGGGAATCAGTAACTGGAAGTACAAGATTGGTTATTTAATAA TGTTAAAAATGAGGCTTTGAAAAGCAGAGGTGCTGTTATCAGAATAGTCTTCTGGGTATAAATTAAAAATGACTGAAGTTCAAGCAATGG TAGAATTCTCTGTGGAGCTAAACAAGTTCTACAATGTGGATTTGTTTCAGAGAGGCAAAGCCGTGGAGGAAATTGTGAATACTGGTGTCA CAGTTATTAAGGATGAGAAGACCAGTGTGGCCCGACTGATGAGGGAAAAAGAACATGAAATGAGCATCCTCTATGGCATAGCTCAGAGGC AGAGGCAAGAAGAGGTACAGGAAGTGCTTCAAGAAGCAGAGAAAACACATCAGGCCACTCTTGGCAATATGATGGATAAACTGGCTAACA CCCAGGGGGAGCTGCTGTCTATAGCAAAACAACTGGGAATCATGACAAATTGGAAAGATTTCCTAGAGGAGGAATTACAGGAAACCAGGA TGGCATTTCAAAAATACATCAATTATACCTTTCCTAAGCTTTCACCAGGACATGCAGATTTTATTCTGCCAGAAAGAAAGAAAACACCTT CTAATCTTGTTATTAAGGAGAACAAAACAACTCTTGATTAGAAGTCTTCAGTTGAAATTCCACTACAAAAGACATCATTCCAGACTAAAT >In-frame_FAM135A_ENST00000505769_chr6_71138122_+_C6orf163_ENST00000388923_chr6_88074679_+_987nt GCGGGGCCGTGCGGCCGGGGACCTGTTGATCGCAGGTATAGCCGGCTGGCCCGGGCTCCCTCGGGACTGGGGCGACTGCGCATGCTCGCT GGCCGCGCTGGGCCAGTAGCCGAGCCGCGGTGACGAACCGGCTCCGCGGTTGCGGTGTTTGCGGTTGCTGTGATGGCGATGTGAGGGGGC CCGGGGCGGGATGGTGCTGACCCGGGTCGGGCCGTCTTCTTGCAGCTGGACAACGAGCTCCTCCGTTCGACAGGCGGGGGAAGAGGCCGA GCCGGGCGAGAGGGTTGAAGATCAACTGGATTATGTATTTGGTTCTGGAATCTCAAAGCAGTCCACAAACAAATTCTTCCTTATGTTGTC TGTGTCAGGTGCTGTTATCAGAATAGTCTTCTGGGTATAAATTAAAAATGACTGAAGTTCAAGCAATGGTAGAATTCTCTGTGGAGCTAA ACAAGTTCTACAATGTGGATTTGTTTCAGAGAGGCAAAGCCGTGGAGGAAATTGTGAATACTGGTGTCACAGTTATTAAGGATGAGAAGA CCAGTGTGGCCCGACTGATGAGGGAAAAAGAACATGAAATGAGCATCCTCTATGGCATAGCTCAGAGGCAGAGGCAAGAAGAGGTACAGG AAGTGCTTCAAGAAGCAGAGAAAACACATCAGGCCACTCTTGGCAATATGATGGATAAACTGGCTAACACCCAGGGGGAGCTGCTGTCTA TAGCAAAACAACTGGGAATCATGACAAATTGGAAAGATTTCCTAGAGGAGGAATTACAGGAAACCAGGATGGCATTTCAAAAATACATCA ATTATACCTTTCCTAAGCTTTCACCAGGACATGCAGATTTTATTCTGCCAGAAAGAAAGAAAACACCTTCTAATCTTGTTATTAAGGAGA >In-frame_FAM135A_ENST00000457062_chr6_71138122_+_C6orf163_ENST00000388923_chr6_88074679_+_850nt TGTTTGCGGTTGCTGTGATGGCGATGTGAGGGGGCCCGGGGCGGGATGGTGCTGACCCGGGTCGGGCCGTCTTCTTGCAGCTGGACAACG AGCTCCTCCGTTCGACAGGCGGGGGAAGAGGCCGAGCCGGGCGAGAGGGGGAACGGTGTATTTTTAACAACGGGAATCAGTAACTGGAAG TACAAGATTGGTTATTTAATAATGTTAAAAATGAGGCTTTGAAAAGCAGAGGTGCTGTTATCAGAATAGTCTTCTGGGTATAAATTAAAA ATGACTGAAGTTCAAGCAATGGTAGAATTCTCTGTGGAGCTAAACAAGTTCTACAATGTGGATTTGTTTCAGAGAGGCAAAGCCGTGGAG GAAATTGTGAATACTGGTGTCACAGTTATTAAGGATGAGAAGACCAGTGTGGCCCGACTGATGAGGGAAAAAGAACATGAAATGAGCATC CTCTATGGCATAGCTCAGAGGCAGAGGCAAGAAGAGGTACAGGAAGTGCTTCAAGAAGCAGAGAAAACACATCAGGCCACTCTTGGCAAT ATGATGGATAAACTGGCTAACACCCAGGGGGAGCTGCTGTCTATAGCAAAACAACTGGGAATCATGACAAATTGGAAAGATTTCCTAGAG GAGGAATTACAGGAAACCAGGATGGCATTTCAAAAATACATCAATTATACCTTTCCTAAGCTTTCACCAGGACATGCAGATTTTATTCTG CCAGAAAGAAAGAAAACACCTTCTAATCTTGTTATTAAGGAGAACAAAACAACTCTTGATTAGAAGTCTTCAGTTGAAATTCCACTACAA >In-frame_FAM135A_ENST00000361499_chr6_71138122_+_C6orf163_ENST00000388923_chr6_88074679_+_924nt CTGTGATGGCGATGTGAGGGGGCCCGGGGCGGGATGGTGCTGACCCGGGTCGGGCCGTCTTCTTGCAGCTGGACAACGAGCTCCTCCGTT CGACAGGCGGGGGAAGAGGCCGAGCCGGGCGAGAGGGTTGAAGATCAACTGGATTATGTATTTGGTTCTGGAATCTCAAAGCAGTCCACA AACAAATTCTTCCTTATGTTGTCTGTGTCAGGGGGAACGGTGTATTTTTAACAACGGGAATCAGTAACTGGAAGTACAAGATTGGTTATT TAATAATGTTAAAAATGAGGCTTTGAAAAGCAGAGGTGCTGTTATCAGAATAGTCTTCTGGGTATAAATTAAAAATGACTGAAGTTCAAG CAATGGTAGAATTCTCTGTGGAGCTAAACAAGTTCTACAATGTGGATTTGTTTCAGAGAGGCAAAGCCGTGGAGGAAATTGTGAATACTG GTGTCACAGTTATTAAGGATGAGAAGACCAGTGTGGCCCGACTGATGAGGGAAAAAGAACATGAAATGAGCATCCTCTATGGCATAGCTC AGAGGCAGAGGCAAGAAGAGGTACAGGAAGTGCTTCAAGAAGCAGAGAAAACACATCAGGCCACTCTTGGCAATATGATGGATAAACTGG CTAACACCCAGGGGGAGCTGCTGTCTATAGCAAAACAACTGGGAATCATGACAAATTGGAAAGATTTCCTAGAGGAGGAATTACAGGAAA CCAGGATGGCATTTCAAAAATACATCAATTATACCTTTCCTAAGCTTTCACCAGGACATGCAGATTTTATTCTGCCAGAAAGAAAGAAAA CACCTTCTAATCTTGTTATTAAGGAGAACAAAACAACTCTTGATTAGAAGTCTTCAGTTGAAATTCCACTACAAAAGACATCATTCCAGA >In-frame_FAM135A_ENST00000505868_chr6_71138122_+_C6orf163_ENST00000388923_chr6_88074679_+_580nt ATGACTGAAGTTCAAGCAATGGTAGAATTCTCTGTGGAGCTAAACAAGTTCTACAATGTGGATTTGTTTCAGAGAGGCAAAGCCGTGGAG GAAATTGTGAATACTGGTGTCACAGTTATTAAGGATGAGAAGACCAGTGTGGCCCGACTGATGAGGGAAAAAGAACATGAAATGAGCATC CTCTATGGCATAGCTCAGAGGCAGAGGCAAGAAGAGGTACAGGAAGTGCTTCAAGAAGCAGAGAAAACACATCAGGCCACTCTTGGCAAT ATGATGGATAAACTGGCTAACACCCAGGGGGAGCTGCTGTCTATAGCAAAACAACTGGGAATCATGACAAATTGGAAAGATTTCCTAGAG GAGGAATTACAGGAAACCAGGATGGCATTTCAAAAATACATCAATTATACCTTTCCTAAGCTTTCACCAGGACATGCAGATTTTATTCTG CCAGAAAGAAAGAAAACACCTTCTAATCTTGTTATTAAGGAGAACAAAACAACTCTTGATTAGAAGTCTTCAGTTGAAATTCCACTACAA |
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FusionGenePPI for FAM135A_C6orf163 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
FAM135A | C6orf163 | FBXL13 |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for FAM135A_C6orf163 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for FAM135A_C6orf163 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |