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Center for Computational Systems Medicine
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FusionGeneSummary

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FusionProtFeature

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FusionGeneSequence

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FusionGenePPI

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RelatedDiseases

Fusion gene ID: 11381

FusionGeneSummary for EIF6_BANF2

check button Fusion gene summary
Fusion gene informationFusion gene name: EIF6_BANF2
Fusion gene ID: 11381
HgeneTgene
Gene symbol

EIF6

BANF2

Gene ID

3692

140836

Gene nameeukaryotic translation initiation factor 6barrier to autointegration factor 2
SynonymsCAB|EIF3A|ITGB4BP|b(2)gcn|eIF-6|p27(BBP)|p27BBPBAF-L|BAF2|BAFL|C20orf179
Cytomap

20q11.22

20p12.1

Type of geneprotein-codingprotein-coding
Descriptioneukaryotic translation initiation factor 6B4 integrin interactoreukaryotic translation initiation factor 3Ap27 beta-4 integrin-binding proteinbarrier-to-autointegration factor-like proteintestis secretory sperm-binding protein Li 212a
Modification date2018052320180329
UniProtAcc

P56537

Q9H503

Ensembl transtripts involved in fusion geneENST00000374436, ENST00000374443, 
ENST00000374450, ENST00000462894, 
ENST00000545418, ENST00000377805, 
ENST00000246090, ENST00000467330, 
Fusion gene scores* DoF score2 X 3 X 2=122 X 1 X 2=4
# samples 32
** MAII scorelog2(3/12*10)=1.32192809488736
effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs).
DoF>8 and MAII>0
log2(2/4*10)=2.32192809488736
Context

PubMed: EIF6 [Title/Abstract] AND BANF2 [Title/Abstract] AND fusion [Title/Abstract]

Functional or gene categories assigned by FusionGDB annotation
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID

check button Fusion gene information from three resources
(ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018))
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
Data typeSourceCancer typeSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
TCGALDBLCATCGA-XF-A8HG-01AEIF6chr20

33867369

-BANF2chr20

17716310

+
* LD: Li Ding group's fusion gene list
  RV: Roel Verhaak group's fusion gene list
  ChiTaRs fusion database

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
In-frameENST00000374436ENST00000545418EIF6chr20

33867369

-BANF2chr20

17716310

+
Frame-shiftENST00000374436ENST00000377805EIF6chr20

33867369

-BANF2chr20

17716310

+
Frame-shiftENST00000374436ENST00000246090EIF6chr20

33867369

-BANF2chr20

17716310

+
5CDS-3UTRENST00000374436ENST00000467330EIF6chr20

33867369

-BANF2chr20

17716310

+
Frame-shiftENST00000374443ENST00000545418EIF6chr20

33867369

-BANF2chr20

17716310

+
In-frameENST00000374443ENST00000377805EIF6chr20

33867369

-BANF2chr20

17716310

+
In-frameENST00000374443ENST00000246090EIF6chr20

33867369

-BANF2chr20

17716310

+
5CDS-3UTRENST00000374443ENST00000467330EIF6chr20

33867369

-BANF2chr20

17716310

+
Frame-shiftENST00000374450ENST00000545418EIF6chr20

33867369

-BANF2chr20

17716310

+
In-frameENST00000374450ENST00000377805EIF6chr20

33867369

-BANF2chr20

17716310

+
In-frameENST00000374450ENST00000246090EIF6chr20

33867369

-BANF2chr20

17716310

+
5CDS-3UTRENST00000374450ENST00000467330EIF6chr20

33867369

-BANF2chr20

17716310

+
intron-3CDSENST00000462894ENST00000545418EIF6chr20

33867369

-BANF2chr20

17716310

+
intron-3CDSENST00000462894ENST00000377805EIF6chr20

33867369

-BANF2chr20

17716310

+
intron-3CDSENST00000462894ENST00000246090EIF6chr20

33867369

-BANF2chr20

17716310

+
intron-3UTRENST00000462894ENST00000467330EIF6chr20

33867369

-BANF2chr20

17716310

+

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FusionProtFeatures for EIF6_BANF2


check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
EIF6

P56537

BANF2

Q9H503

Binds to the 60S ribosomal subunit and prevents itsassociation with the 40S ribosomal subunit to form the 80Sinitiation complex in the cytoplasm. Behaves as a stimulatorytranslation initiation factor downstream insulin/growth factors.Is also involved in ribosome biogenesis. Associates with pre-60Ssubunits in the nucleus and is involved in its nuclear export.Cytoplasmic release of TIF6 from 60S subunits and nuclearrelocalization is promoted by a RACK1 (RACK1)-dependent proteinkinase C activity (PubMed:10085284, PubMed:14654845,PubMed:21536732). In tissues responsive to insulin, controls fattyacid synthesis and glycolysis by exerting translational control ofadipogenic transcription factors such as CEBPB, CEBPD and ATF4that have G/C rich or uORF in their 5'UTR. Required for ROS-dependent megakaryocyte maturation and platelets formation,controls the expression of mitochondrial respiratory chain genesinvolved in reactive oxygen species (ROS) synthesis (Bysimilarity). Involved in miRNA-mediated gene silencing by the RNA-induced silencing complex (RISC). Required for both miRNA-mediatedtranslational repression and miRNA-mediated cleavage ofcomplementary mRNAs by RISC (PubMed:17507929). Modulates cellcycle progression and global translation of pre-B cells, itsactivation seems to be rate-limiting in tumorigenesis and tumorgrowth (By similarity). {ECO:0000255|HAMAP-Rule:MF_03132,ECO:0000269|PubMed:10085284, ECO:0000269|PubMed:14654845,ECO:0000269|PubMed:17507929, ECO:0000269|PubMed:21536732}. May play a role in BANF1 regulation and influencetissue-specific roles of BANF1.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page

.

* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note


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FusionGeneSequence for EIF6_BANF2


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences.
(nt: nucleotides, aa: amino acids)

* Fusion amino acid sequences.
>In-frame_EIF6_ENST00000374436_chr20_33867369_-_BANF2_ENST00000545418_chr20_17716310_+_291aa
MAVRASFENNCEIGCFAKLTNTYCLVAIGGSENFYSVFEGELSDTIPVVHASIAGCRIIGRMCVGNRHGLLVPNNTTDQELQHIRNSLPD
TVQIRRVEERLSALGNVTTCNDYVALVHPDLDRETEEILADVLKVEVFRQTVADQVLVGSYCVFSNQGGLVHPKTSIEDQDELSSLLQVP
LVAGTVNRGSEVIAAGMVVNDWCAFCGLDTTSTELSVVESVFKLNEAQPSTIATSMRDSLIDRPTSCWDNSFXCTRMKPSFRGGSFAVLV

>In-frame_EIF6_ENST00000374443_chr20_33867369_-_BANF2_ENST00000377805_chr20_17716310_+_49aa

>In-frame_EIF6_ENST00000374443_chr20_33867369_-_BANF2_ENST00000246090_chr20_17716310_+_49aa

>In-frame_EIF6_ENST00000374450_chr20_33867369_-_BANF2_ENST00000377805_chr20_17716310_+_49aa

>In-frame_EIF6_ENST00000374450_chr20_33867369_-_BANF2_ENST00000246090_chr20_17716310_+_49aa


* Fusion transcript sequences (only coding sequence (CDS) region).
>In-frame_EIF6_ENST00000374436_chr20_33867369_-_BANF2_ENST00000545418_chr20_17716310_+_875nt
ATGGCGGTCCGAGCTTCGTTCGAGAACAACTGTGAGATCGGCTGCTTTGCCAAGCTCACCAACACCTACTGTCTGGTAGCGATCGGAGGC
TCAGAGAACTTCTACAGTGTGTTCGAGGGCGAGCTCTCCGATACCATCCCCGTGGTGCACGCGTCTATCGCCGGCTGCCGCATCATCGGG
CGCATGTGTGTGGGGAACAGGCACGGTCTCCTGGTACCCAACAATACCACCGACCAGGAGCTGCAACACATTCGCAACAGCCTCCCAGAC
ACAGTGCAGATTAGGCGGGTGGAGGAGCGGCTCTCAGCCTTGGGCAATGTCACCACCTGCAATGACTACGTGGCCTTGGTCCACCCAGAC
TTGGACAGGGAGACAGAAGAAATTCTGGCAGATGTGCTCAAGGTGGAAGTCTTCAGACAGACAGTGGCCGACCAGGTGCTAGTAGGAAGC
TACTGTGTCTTCAGCAATCAGGGAGGGCTGGTGCATCCCAAGACTTCAATTGAAGACCAGGATGAGCTGTCCTCTCTTCTTCAAGTCCCC
CTTGTGGCGGGGACTGTGAACCGAGGCAGTGAGGTGATTGCTGCTGGGATGGTGGTGAATGACTGGTGTGCCTTCTGTGGCCTGGACACA
ACCAGCACAGAGCTGTCAGTGGTGGAGAGTGTCTTCAAGCTGAATGAAGCCCAGCCTAGCACCATTGCCACCAGCATGCGGGATTCCCTC
ATTGACAGGCCTACATCCTGCTGGGACAATTCCTTCTGATGCACAAGAATGAAGCCGAGTTTCAGAGGTGGCTCATTTGCTGTTTTGGTG

>In-frame_EIF6_ENST00000374443_chr20_33867369_-_BANF2_ENST00000377805_chr20_17716310_+_147nt
GCCTACATCCTGCTGGGACAATTCCTTCTGATGCACAAGAATGAAGCCGAGTTTCAGAGGTGGCTCATTTGCTGTTTTGGTGCCACTGAG

>In-frame_EIF6_ENST00000374443_chr20_33867369_-_BANF2_ENST00000246090_chr20_17716310_+_147nt
GCCTACATCCTGCTGGGACAATTCCTTCTGATGCACAAGAATGAAGCCGAGTTTCAGAGGTGGCTCATTTGCTGTTTTGGTGCCACTGAG

>In-frame_EIF6_ENST00000374450_chr20_33867369_-_BANF2_ENST00000377805_chr20_17716310_+_147nt
GCCTACATCCTGCTGGGACAATTCCTTCTGATGCACAAGAATGAAGCCGAGTTTCAGAGGTGGCTCATTTGCTGTTTTGGTGCCACTGAG

>In-frame_EIF6_ENST00000374450_chr20_33867369_-_BANF2_ENST00000246090_chr20_17716310_+_147nt
GCCTACATCCTGCTGGGACAATTCCTTCTGATGCACAAGAATGAAGCCGAGTTTCAGAGGTGGCTCATTTGCTGTTTTGGTGCCACTGAG


* Fusion transcript sequences (Full-length transcript).
>In-frame_EIF6_ENST00000374436_chr20_33867369_-_BANF2_ENST00000545418_chr20_17716310_+_1152nt
GTGAGGGGAACCTGGGAGGGTCAGCTCCGGTCCTGGGTCGGGAGGGGTGGGGGCCAGAGGATTCAGGGCCGGAGGTTCTGGTGGGGGCCC
AGTGGGCGGGACCCGAGGACGGAGGGGCCGGGAGGCCGAGAGGGGCGGGGTCGCGGCGGGGCCTGAGGGACGGAGGCCGGGATACTTGGG
AAAGGATCCGCCGGCCTTGAACTCCCGCCTCCGCCGCCCCTAGGCCTCATGGCGGTCCGAGCTTCGTTCGAGAACAACTGTGAGATCGGC
TGCTTTGCCAAGCTCACCAACACCTACTGTCTGGTAGCGATCGGAGGCTCAGAGAACTTCTACAGTGTGTTCGAGGGCGAGCTCTCCGAT
ACCATCCCCGTGGTGCACGCGTCTATCGCCGGCTGCCGCATCATCGGGCGCATGTGTGTGGGGAACAGGCACGGTCTCCTGGTACCCAAC
AATACCACCGACCAGGAGCTGCAACACATTCGCAACAGCCTCCCAGACACAGTGCAGATTAGGCGGGTGGAGGAGCGGCTCTCAGCCTTG
GGCAATGTCACCACCTGCAATGACTACGTGGCCTTGGTCCACCCAGACTTGGACAGGGAGACAGAAGAAATTCTGGCAGATGTGCTCAAG
GTGGAAGTCTTCAGACAGACAGTGGCCGACCAGGTGCTAGTAGGAAGCTACTGTGTCTTCAGCAATCAGGGAGGGCTGGTGCATCCCAAG
ACTTCAATTGAAGACCAGGATGAGCTGTCCTCTCTTCTTCAAGTCCCCCTTGTGGCGGGGACTGTGAACCGAGGCAGTGAGGTGATTGCT
GCTGGGATGGTGGTGAATGACTGGTGTGCCTTCTGTGGCCTGGACACAACCAGCACAGAGCTGTCAGTGGTGGAGAGTGTCTTCAAGCTG
AATGAAGCCCAGCCTAGCACCATTGCCACCAGCATGCGGGATTCCCTCATTGACAGGCCTACATCCTGCTGGGACAATTCCTTCTGATGC
ACAAGAATGAAGCCGAGTTTCAGAGGTGGCTCATTTGCTGTTTTGGTGCCACTGAGTGTGAGGCCCAGCAGACTTCTCACTGCCTCAAGG

>In-frame_EIF6_ENST00000374443_chr20_33867369_-_BANF2_ENST00000377805_chr20_17716310_+_928nt
TCCAAGGTACAGTCGCCGCGTGCGGAGCTTGTTACTGGTTACTTGGCCTCATGGCGGTCCGAGCTTCGTTCGAGAACAACTGTGAGATCG
GCTGCTTTGCCAAGCTCACCAACACCTACTGTCTGGTAGCGATCGGAGGCTCAGAGAACTTCTACAGGTGCGGCGGGAGCCCCGGGGCTT
ACGGTGGCGGGGAGGCGTGCGCAGGAGTCAAGAGCTCCGGCAGTGGGAGGGTGCCGGCCCCTCTGCCCCGCCACCACCGAGTCCATGTCC
CTACAGTGTGTTCGAGGGCGAGCTCTCCGATACCATCCCCGTGGTGCACGCGTCTATCGCCGGCTGCCGCATCATCGGGCGCATGTGTGT
GGGAGACAGAAGAAATTCTGGCAGATGTGCTCAAGGTGGAAGTCTTCAGACAGACAGTGGCCGACCAGGTGCTAGTAGGAAGCTACTGTG
TCTTCAGCAATCAGGGAGGGCTGGTGCATCCCAAGACTTCAATTGAAGACCAGGATGAGCTGTCCTCTCTTCTTCAAGTCCCCCTTGTGG
CGGGGACTGTGAACCGAGGCAGTGAGGTGATTGCTGCTGGGATGGTGGTGAATGACTGGTGTGCCTTCTGTGGCCTGGACACAACCAGCA
CAGAGCTGTCAGTGGTGGAGAGTGTCTTCAAGCTGAATGAAGCCCAGCCTAGCACCATTGCCACCAGCATGCGGGATTCCCTCATTGACA
GGCCTACATCCTGCTGGGACAATTCCTTCTGATGCACAAGAATGAAGCCGAGTTTCAGAGGTGGCTCATTTGCTGTTTTGGTGCCACTGA
GTGTGAGGCCCAGCAGACTTCTCACTGCCTCAAGGAGTGGTGTGCCTGCTTCCTGTAGACACAAACCTCATTGCTGCCCCCCACCACCCT

>In-frame_EIF6_ENST00000374443_chr20_33867369_-_BANF2_ENST00000246090_chr20_17716310_+_928nt
TCCAAGGTACAGTCGCCGCGTGCGGAGCTTGTTACTGGTTACTTGGCCTCATGGCGGTCCGAGCTTCGTTCGAGAACAACTGTGAGATCG
GCTGCTTTGCCAAGCTCACCAACACCTACTGTCTGGTAGCGATCGGAGGCTCAGAGAACTTCTACAGGTGCGGCGGGAGCCCCGGGGCTT
ACGGTGGCGGGGAGGCGTGCGCAGGAGTCAAGAGCTCCGGCAGTGGGAGGGTGCCGGCCCCTCTGCCCCGCCACCACCGAGTCCATGTCC
CTACAGTGTGTTCGAGGGCGAGCTCTCCGATACCATCCCCGTGGTGCACGCGTCTATCGCCGGCTGCCGCATCATCGGGCGCATGTGTGT
GGGAGACAGAAGAAATTCTGGCAGATGTGCTCAAGGTGGAAGTCTTCAGACAGACAGTGGCCGACCAGGTGCTAGTAGGAAGCTACTGTG
TCTTCAGCAATCAGGGAGGGCTGGTGCATCCCAAGACTTCAATTGAAGACCAGGATGAGCTGTCCTCTCTTCTTCAAGTCCCCCTTGTGG
CGGGGACTGTGAACCGAGGCAGTGAGGTGATTGCTGCTGGGATGGTGGTGAATGACTGGTGTGCCTTCTGTGGCCTGGACACAACCAGCA
CAGAGCTGTCAGTGGTGGAGAGTGTCTTCAAGCTGAATGAAGCCCAGCCTAGCACCATTGCCACCAGCATGCGGGATTCCCTCATTGACA
GGCCTACATCCTGCTGGGACAATTCCTTCTGATGCACAAGAATGAAGCCGAGTTTCAGAGGTGGCTCATTTGCTGTTTTGGTGCCACTGA
GTGTGAGGCCCAGCAGACTTCTCACTGCCTCAAGGAGTGGTGTGCCTGCTTCCTGTAGACACAAACCTCATTGCTGCCCCCCACCACCCT

>In-frame_EIF6_ENST00000374450_chr20_33867369_-_BANF2_ENST00000377805_chr20_17716310_+_1200nt
GTCGATGACAGCTCCTAAAAAGCTCCTGAATGAATAATGAATGAATGAACGCGAGCAGGCTAGGCGTGGGGCCAGGCGGGGTCGCGCCCA
GACCGCTCGCGACCATAGAGTCCGCCGGAGGCCGGAGGTAGAGGGGCTGGATGCGTGGCGGGGAGCGCCGGGCTCTCCCGGAAGTCTCCC
TGGACGGAAGTGGAAACGGAAACCTTTTTAGGGAGTCCAAGGTACAGTCGCCGCGTGCGGAGCTTGTTACTGGTTACTTGGCCTCATGGC
GGTCCGAGCTTCGTTCGAGAACAACTGTGAGATCGGCTGCTTTGCCAAGCTCACCAACACCTACTGTCTGGTAGCGATCGGAGGCTCAGA
GAACTTCTACAGTGTGTTCGAGGGCGAGCTCTCCGATACCATCCCCGTGGTGCACGCGTCTATCGCCGGCTGCCGCATCATCGGGCGCAT
GTGTGTGGGGAACAGGCACGGTCTCCTGGTACCCAACAATACCACCGACCAGGAGCTGCAACACATTCGCAACAGCCTCCCAGACACAGT
GCAGATTAGGCGGGTGGAGGAGCGGCTCTCAGCCTTGGGCAATGTCACCACCTGCAATGACTACGTGGCCTTGGTCCACCCAGACTTGGA
CAGGGAGACAGAAGAAATTCTGGCAGATGTGCTCAAGGTGGAAGTCTTCAGACAGACAGTGGCCGACCAGGTGCTAGTAGGAAGCTACTG
TGTCTTCAGCAATCAGGGAGGGCTGGTGCATCCCAAGACTTCAATTGAAGACCAGGATGAGCTGTCCTCTCTTCTTCAAGTCCCCCTTGT
GGCGGGGACTGTGAACCGAGGCAGTGAGGTGATTGCTGCTGGGATGGTGGTGAATGACTGGTGTGCCTTCTGTGGCCTGGACACAACCAG
CACAGAGCTGTCAGTGGTGGAGAGTGTCTTCAAGCTGAATGAAGCCCAGCCTAGCACCATTGCCACCAGCATGCGGGATTCCCTCATTGA
CAGGCCTACATCCTGCTGGGACAATTCCTTCTGATGCACAAGAATGAAGCCGAGTTTCAGAGGTGGCTCATTTGCTGTTTTGGTGCCACT
GAGTGTGAGGCCCAGCAGACTTCTCACTGCCTCAAGGAGTGGTGTGCCTGCTTCCTGTAGACACAAACCTCATTGCTGCCCCCCACCACC

>In-frame_EIF6_ENST00000374450_chr20_33867369_-_BANF2_ENST00000246090_chr20_17716310_+_1200nt
GTCGATGACAGCTCCTAAAAAGCTCCTGAATGAATAATGAATGAATGAACGCGAGCAGGCTAGGCGTGGGGCCAGGCGGGGTCGCGCCCA
GACCGCTCGCGACCATAGAGTCCGCCGGAGGCCGGAGGTAGAGGGGCTGGATGCGTGGCGGGGAGCGCCGGGCTCTCCCGGAAGTCTCCC
TGGACGGAAGTGGAAACGGAAACCTTTTTAGGGAGTCCAAGGTACAGTCGCCGCGTGCGGAGCTTGTTACTGGTTACTTGGCCTCATGGC
GGTCCGAGCTTCGTTCGAGAACAACTGTGAGATCGGCTGCTTTGCCAAGCTCACCAACACCTACTGTCTGGTAGCGATCGGAGGCTCAGA
GAACTTCTACAGTGTGTTCGAGGGCGAGCTCTCCGATACCATCCCCGTGGTGCACGCGTCTATCGCCGGCTGCCGCATCATCGGGCGCAT
GTGTGTGGGGAACAGGCACGGTCTCCTGGTACCCAACAATACCACCGACCAGGAGCTGCAACACATTCGCAACAGCCTCCCAGACACAGT
GCAGATTAGGCGGGTGGAGGAGCGGCTCTCAGCCTTGGGCAATGTCACCACCTGCAATGACTACGTGGCCTTGGTCCACCCAGACTTGGA
CAGGGAGACAGAAGAAATTCTGGCAGATGTGCTCAAGGTGGAAGTCTTCAGACAGACAGTGGCCGACCAGGTGCTAGTAGGAAGCTACTG
TGTCTTCAGCAATCAGGGAGGGCTGGTGCATCCCAAGACTTCAATTGAAGACCAGGATGAGCTGTCCTCTCTTCTTCAAGTCCCCCTTGT
GGCGGGGACTGTGAACCGAGGCAGTGAGGTGATTGCTGCTGGGATGGTGGTGAATGACTGGTGTGCCTTCTGTGGCCTGGACACAACCAG
CACAGAGCTGTCAGTGGTGGAGAGTGTCTTCAAGCTGAATGAAGCCCAGCCTAGCACCATTGCCACCAGCATGCGGGATTCCCTCATTGA
CAGGCCTACATCCTGCTGGGACAATTCCTTCTGATGCACAAGAATGAAGCCGAGTTTCAGAGGTGGCTCATTTGCTGTTTTGGTGCCACT
GAGTGTGAGGCCCAGCAGACTTCTCACTGCCTCAAGGAGTGGTGTGCCTGCTTCCTGTAGACACAAACCTCATTGCTGCCCCCCACCACC


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FusionGenePPI for EIF6_BANF2


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page

.

check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors
EIF6BCCIP, RGS10, RPL3, FIBP, GTPBP4, RPL21P97, NPEPPS, ARF6, RRP15, FUS, RPL34, YARS, SORBS1, HAS1, OAT, PAICS, GNB2L1, ABCF1, AKT1S1, C4orf27, MRPS31, OFD1, SEPT3, USP33, WFS1, ACAP3, CRELD1, FUNDC2, PDHA1, LRIF1, RPL6, UPF3B, ACTG1, ENOX1, GIT1, HIP1, POLA2, ALDH2, KIAA1377, PSME1, ITGB4, EIF3B, EIF3C, EIF3J, CLEC4G, DHX58, OAS3, EIF2AK2, CSNK2B, TK1, PLK1, SIRT7, CUL3, CUL1, CAND1, APP, RPL7, RPL18A, RPL5, FBL, RPL4, NOP58, RPL37A, RPL23, GNL3, RPS24, RPS4X, RPL31, RPL17, RPL9, DHX9, RPS6, EBNA1BP2, RPS15A, HNRNPU, RPS5, NOP2, LMNB1, RBM14, ECT2, VCAM1, HDAC9, ZBTB26, XRN2, ABHD14A, ASNA1, BZW2, CAPN1, CFL1, CNBP, DFFA, EIF4E, HSPA1A, HSPA9, PPP5C, RARS, TNFAIP8, GINS3, HPRT1, PAFAH1B2, PEPD, GLTSCR2, NMD3, POP1, PPAN, TOP2A, TOP2B, ZNF622, CUL7, OBSL1, RNF2, CHMP4A, CHMP4B, DDX27, API5, CLTC, DDX39A, ELAC2, MCFD2, NLRP1, PABPN1, PDCD4, PFDN4, PPIB, RAN, RPL13A, RPL36, RPL8, RPLP0, RUVBL2, TSNAX, VAPA, IMPA1, KIAA0020, NHP2L1, PSMA4, NTRK1, IFI16, HNRNPD, CNOT2, PHF8, ESR1, NCL, TRIM25, CCND2BANF2


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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RelatedDrugs for EIF6_BANF2


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.0 2018-04-02)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for EIF6_BANF2


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource
HgeneEIF6C0019693HIV Infections1CTD_human
HgeneEIF6C1458155Mammary Neoplasms1CTD_human