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Fusion gene ID: 11265 |
FusionGeneSummary for EIF3E_PHF20L1 |
Fusion gene summary |
Fusion gene information | Fusion gene name: EIF3E_PHF20L1 | Fusion gene ID: 11265 | Hgene | Tgene | Gene symbol | EIF3E | PHF20L1 | Gene ID | 3646 | 51105 |
Gene name | eukaryotic translation initiation factor 3 subunit E | PHD finger protein 20 like 1 | |
Synonyms | EIF3-P48|EIF3S6|INT6|eIF3-p46 | CGI-72|TDRD20B|URLC1 | |
Cytomap | 8q23.1 | 8q24.22 | |
Type of gene | protein-coding | protein-coding | |
Description | eukaryotic translation initiation factor 3 subunit EeIF-3 p48eukaryotic translation initiation factor 3 subunit 6eukaryotic translation initiation factor 3 subunit E isoform 2 transcripteukaryotic translation initiation factor 3, subunit 6 (48kD)euka | PHD finger protein 20-like protein 1tudor domain containing 20Btudor domain-containing protein PHF20L1up-regulated in lung cancer 1 | |
Modification date | 20180523 | 20180519 | |
UniProtAcc | P60228 | A8MW92 | |
Ensembl transtripts involved in fusion gene | ENST00000220849, ENST00000519030, ENST00000519517, | ENST00000395386, ENST00000337920, ENST00000395376, ENST00000220847, ENST00000395390, ENST00000395379, | |
Fusion gene scores | * DoF score | 3 X 3 X 2=18 | 3 X 3 X 3=27 |
# samples | 3 | 3 | |
** MAII score | log2(3/18*10)=0.736965594166206 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | log2(3/27*10)=0.15200309344505 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
Context | PubMed: EIF3E [Title/Abstract] AND PHF20L1 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation | Oncogene involved fusion gene, in-frame and retained their domain. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | EIF3E | GO:0006413 | translational initiation | 17581632 |
Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | LD | PRAD | TCGA-YL-A8SH-01B | EIF3E | chr8 | 109240496 | - | PHF20L1 | chr8 | 133806656 | + |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000220849 | ENST00000395386 | EIF3E | chr8 | 109240496 | - | PHF20L1 | chr8 | 133806656 | + |
In-frame | ENST00000220849 | ENST00000337920 | EIF3E | chr8 | 109240496 | - | PHF20L1 | chr8 | 133806656 | + |
In-frame | ENST00000220849 | ENST00000395376 | EIF3E | chr8 | 109240496 | - | PHF20L1 | chr8 | 133806656 | + |
5CDS-5UTR | ENST00000220849 | ENST00000220847 | EIF3E | chr8 | 109240496 | - | PHF20L1 | chr8 | 133806656 | + |
5CDS-5UTR | ENST00000220849 | ENST00000395390 | EIF3E | chr8 | 109240496 | - | PHF20L1 | chr8 | 133806656 | + |
5CDS-5UTR | ENST00000220849 | ENST00000395379 | EIF3E | chr8 | 109240496 | - | PHF20L1 | chr8 | 133806656 | + |
Frame-shift | ENST00000519030 | ENST00000395386 | EIF3E | chr8 | 109240496 | - | PHF20L1 | chr8 | 133806656 | + |
Frame-shift | ENST00000519030 | ENST00000337920 | EIF3E | chr8 | 109240496 | - | PHF20L1 | chr8 | 133806656 | + |
Frame-shift | ENST00000519030 | ENST00000395376 | EIF3E | chr8 | 109240496 | - | PHF20L1 | chr8 | 133806656 | + |
5CDS-5UTR | ENST00000519030 | ENST00000220847 | EIF3E | chr8 | 109240496 | - | PHF20L1 | chr8 | 133806656 | + |
5CDS-5UTR | ENST00000519030 | ENST00000395390 | EIF3E | chr8 | 109240496 | - | PHF20L1 | chr8 | 133806656 | + |
5CDS-5UTR | ENST00000519030 | ENST00000395379 | EIF3E | chr8 | 109240496 | - | PHF20L1 | chr8 | 133806656 | + |
5UTR-3CDS | ENST00000519517 | ENST00000395386 | EIF3E | chr8 | 109240496 | - | PHF20L1 | chr8 | 133806656 | + |
5UTR-3CDS | ENST00000519517 | ENST00000337920 | EIF3E | chr8 | 109240496 | - | PHF20L1 | chr8 | 133806656 | + |
5UTR-3CDS | ENST00000519517 | ENST00000395376 | EIF3E | chr8 | 109240496 | - | PHF20L1 | chr8 | 133806656 | + |
5UTR-5UTR | ENST00000519517 | ENST00000220847 | EIF3E | chr8 | 109240496 | - | PHF20L1 | chr8 | 133806656 | + |
5UTR-5UTR | ENST00000519517 | ENST00000395390 | EIF3E | chr8 | 109240496 | - | PHF20L1 | chr8 | 133806656 | + |
5UTR-5UTR | ENST00000519517 | ENST00000395379 | EIF3E | chr8 | 109240496 | - | PHF20L1 | chr8 | 133806656 | + |
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FusionProtFeatures for EIF3E_PHF20L1 |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
EIF3E | PHF20L1 |
Component of the eukaryotic translation initiationfactor 3 (eIF-3) complex, which is required for several steps inthe initiation of protein synthesis (PubMed:17581632,PubMed:25849773, PubMed:27462815). The eIF-3 complex associateswith the 40S ribosome and facilitates the recruitment of eIF-1,eIF-1A, eIF-2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNArecruitment to the 43S PIC and scanning of the mRNA for AUGrecognition. The eIF-3 complex is also required for disassemblyand recycling of post-termination ribosomal complexes andsubsequently prevents premature joining of the 40S and 60Sribosomal subunits prior to initiation (PubMed:17581632). The eIF-3 complex specifically targets and initiates translation of asubset of mRNAs involved in cell proliferation, including cellcycling, differentiation and apoptosis, and uses different modesof RNA stem-loop binding to exert either translational activationor repression (PubMed:25849773). Required for nonsense-mediatedmRNA decay (NMD); may act in conjunction with UPF2 to divert mRNAsfrom translation to the NMD pathway (PubMed:17468741). Mayinteract with MCM7 and EPAS1 and regulate the proteasome-mediateddegradation of these proteins (PubMed:17310990, PubMed:17324924).{ECO:0000255|HAMAP-Rule:MF_03004, ECO:0000269|PubMed:17310990,ECO:0000269|PubMed:17324924, ECO:0000269|PubMed:17468741,ECO:0000269|PubMed:17581632, ECO:0000269|PubMed:25849773,ECO:0000269|PubMed:27462815}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | >PHF20L1 | chr8:109240496 | chr8:133806656 | ENST00000220847 | + | 1 | 20 | 530_579 | -560 | 405 | Compositional bias | Note=Lys-rich |
Tgene | >PHF20L1 | chr8:109240496 | chr8:133806656 | ENST00000337920 | + | 1 | 8 | 530_579 | 27 | 286 | Compositional bias | Note=Lys-rich |
Tgene | >PHF20L1 | chr8:109240496 | chr8:133806656 | ENST00000395386 | + | 1 | 21 | 530_579 | 27 | 1018 | Compositional bias | Note=Lys-rich |
Tgene | >PHF20L1 | chr8:109240496 | chr8:133806656 | ENST00000220847 | + | 1 | 20 | 11_71 | -560 | 405 | Domain | Note=Tudor 1 |
Tgene | >PHF20L1 | chr8:109240496 | chr8:133806656 | ENST00000220847 | + | 1 | 20 | 85_141 | -560 | 405 | Domain | Note=Tudor 2 |
Tgene | >PHF20L1 | chr8:109240496 | chr8:133806656 | ENST00000337920 | + | 1 | 8 | 85_141 | 27 | 286 | Domain | Note=Tudor 2 |
Tgene | >PHF20L1 | chr8:109240496 | chr8:133806656 | ENST00000395386 | + | 1 | 21 | 85_141 | 27 | 1018 | Domain | Note=Tudor 2 |
Tgene | >PHF20L1 | chr8:109240496 | chr8:133806656 | ENST00000220847 | + | 1 | 20 | 681_729 | -560 | 405 | Zinc finger | Note=PHD-type |
Tgene | >PHF20L1 | chr8:109240496 | chr8:133806656 | ENST00000337920 | + | 1 | 8 | 681_729 | 27 | 286 | Zinc finger | Note=PHD-type |
Tgene | >PHF20L1 | chr8:109240496 | chr8:133806656 | ENST00000395386 | + | 1 | 21 | 681_729 | 27 | 1018 | Zinc finger | Note=PHD-type |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | >EIF3E | chr8:109240496 | chr8:133806656 | ENST00000220849 | - | 7 | 13 | 221_398 | 240 | 446 | Domain | PCI |
Tgene | PHF20L1 | chr8:109240496 | chr8:133806656 | ENST00000337920 | + | 1 | 8 | 11_71 | 27 | 286 | Domain | Note=Tudor 1 |
Tgene | PHF20L1 | chr8:109240496 | chr8:133806656 | ENST00000395386 | + | 1 | 21 | 11_71 | 27 | 1018 | Domain | Note=Tudor 1 |
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FusionGeneSequence for EIF3E_PHF20L1 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_EIF3E_ENST00000220849_chr8_109240496_-_PHF20L1_ENST00000395386_chr8_133806656_+_1231aa MAEYDLTTRIAHFLDRHLVFPLLEFLSVKEIYNEKELLQGKLDLLSDTNMVDFAMDVYKNLYSDDIPHALREKRTTVVAQLKQLQAETEP IVKMFEDPETTRQMQSTRDGRMLFDYLADKHGFRQEYLDTLYRYAKFQYECGNYSGAAEYLYFFRVLVPATDRNALSSLWGKLASEILMQ NWDAAMEDLTRLKETIDNNSVSSPLQSLQQRTWLIHWSLFVFFNHPKGRDNIIDLFLYQPQYPSRIEKIDYEEGKMLVHFERWSHRYDEW IYWDSNRLRPLERPALRKEGLKDEEDFFDFKAGEEVLARWTDCRYYPAKIEAINKEGTFTVQFYDGVIRCLKRMHIKAMPEDAKGQVKSQ HPLSWCCPIDPAGSCNQSMGSEDWIALVKAAAAAAAKNKTGSKPRTSANSNKDKDKDERKWFKVPSKKEETSTCIATPDVEKKEDLPTSS ETFGLHVENVPKMVFPQPESTLSNKRKNNQGNSFQAKRARLNKITGLLASKAVGVDGAEKKEDYNETAPMLEQAISPKPQSQKKNEADIS SSANTQKPALLSSTLSSGKARSKKCKHESGDSSGCIKPPKSPLSPELIQVEDLTLVSQLSSSVINKTSPPQPVNPPRPFKHSERRRRSQR LATLPMPDDSVEKVSSPSPATDGKVFSISSQNQQESSVPEVPDVAHLPLEKLGPCLPLDLSRGSEVTAPVASDSSYRNECPRAEKEDTQM LPNPSSKAIADGRGAPAAAGISKTEKKVKLEDKSSTAFGKRKEKDKERREKRDKDHYRPKQKKKKKKKKKSKQHDYSDYEDSSLEFLERC SSPLTRSSGSSLASRSMFTEKTTTYQYPRAILSVDLSGENLSDVDFLDDSSTESLLLSGDEYNQDFDSTNFEESQDEDDALNEIVRCICE MDEENGFMIQCEECLCWQHSVCMGLLEESIPEQYICYICRDPPGQRWSAKYRYDKEWLNNGRMCGLSFFKENYSHLNAKKIVSTHHLLAD VYGVTEVLHGLQLKIGILKNKHHPDLHLWACSGKRKDQDQIIAGVEKKIAQDTVNREEKKYVQNHKEPPRLPLKMEGTYITSEHSYQKPQ SFGQDCKSLADPGSSDDDDVSSLEEEQEFHMRSKNSLQYSAKEHGMPEKNPAEGNTVFVYNDKKGTEDPGDSHLQWQLNLLTHIENVQNE >In-frame_EIF3E_ENST00000220849_chr8_109240496_-_PHF20L1_ENST00000337920_chr8_133806656_+_499aa MAEYDLTTRIAHFLDRHLVFPLLEFLSVKEIYNEKELLQGKLDLLSDTNMVDFAMDVYKNLYSDDIPHALREKRTTVVAQLKQLQAETEP IVKMFEDPETTRQMQSTRDGRMLFDYLADKHGFRQEYLDTLYRYAKFQYECGNYSGAAEYLYFFRVLVPATDRNALSSLWGKLASEILMQ NWDAAMEDLTRLKETIDNNSVSSPLQSLQQRTWLIHWSLFVFFNHPKGRDNIIDLFLYQPQYPSRIEKIDYEEGKMLVHFERWSHRYDEW IYWDSNRLRPLERPALRKEGLKDEEDFFDFKAGEEVLARWTDCRYYPAKIEAINKEGTFTVQFYDGVIRCLKRMHIKAMPEDAKGQDWIA LVKAAAAAAAKNKTGSKPRTSANSNKDKDKDERKWFKVPSKKEETSTCIATPDVEKKEDLPTSSETFGLHVENVPKMVFPQPESTLSNKR >In-frame_EIF3E_ENST00000220849_chr8_109240496_-_PHF20L1_ENST00000395376_chr8_133806656_+_530aa MAEYDLTTRIAHFLDRHLVFPLLEFLSVKEIYNEKELLQGKLDLLSDTNMVDFAMDVYKNLYSDDIPHALREKRTTVVAQLKQLQAETEP IVKMFEDPETTRQMQSTRDGRMLFDYLADKHGFRQEYLDTLYRYAKFQYECGNYSGAAEYLYFFRVLVPATDRNALSSLWGKLASEILMQ NWDAAMEDLTRLKETIDNNSVSSPLQSLQQRTWLIHWSLFVFFNHPKGRDNIIDLFLYQPQYPSRIEKIDYEEGKMLVHFERWSHRYDEW IYWDSNRLRPLERPALRKEGLKDEEDFFDFKAGEEVLARWTDCRYYPAKIEAINKEGTFTVQFYDGVIRCLKRMHIKAMPEDAKGQFLFQ VKSQHPLSWCCPIDPAGSCNQSMGSEDWIALVKAAAAAAAKNKTGSKPRTSANSNKDKDKDERKWFKVPSKKEETSTCIATPDVEKKEDL |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_EIF3E_ENST00000220849_chr8_109240496_-_PHF20L1_ENST00000395386_chr8_133806656_+_3693nt ATGGCGGAGTACGACTTGACTACTCGCATCGCGCACTTTTTGGATCGGCATCTAGTCTTTCCGCTTCTTGAATTTCTCTCTGTAAAGGAG ATATATAATGAAAAGGAATTATTACAAGGTAAATTGGACCTTCTTAGTGATACCAACATGGTAGACTTTGCTATGGATGTATACAAAAAC CTTTATTCTGATGATATTCCTCATGCTTTGAGAGAGAAAAGAACCACAGTGGTTGCACAACTGAAACAGCTTCAGGCAGAAACAGAACCA ATTGTGAAGATGTTTGAAGATCCAGAAACTACAAGGCAAATGCAGTCAACCAGGGATGGTAGGATGCTCTTTGACTACCTGGCGGACAAG CATGGTTTTAGGCAGGAATATTTAGATACACTCTACAGATATGCAAAATTCCAGTACGAATGTGGGAATTACTCAGGAGCAGCAGAATAT CTTTATTTTTTTAGAGTGCTGGTTCCAGCAACAGATAGAAATGCTTTAAGTTCACTCTGGGGAAAGCTGGCCTCTGAAATCTTAATGCAG AATTGGGATGCAGCCATGGAAGACCTTACACGGTTAAAAGAGACCATAGATAATAATTCTGTGAGTTCTCCACTTCAGTCTCTTCAGCAG AGAACATGGCTCATTCACTGGTCTCTGTTTGTTTTCTTCAATCACCCCAAAGGTCGCGATAATATTATTGACCTCTTCCTTTATCAGCCA CAGTATCCATCACGAATTGAAAAAATTGACTATGAGGAGGGCAAGATGTTGGTCCATTTTGAGCGCTGGAGTCATCGTTATGATGAGTGG ATTTACTGGGATAGCAATAGATTGCGACCCCTTGAGAGACCAGCACTAAGAAAAGAAGGGCTAAAAGATGAGGAAGATTTCTTTGATTTT AAAGCTGGAGAAGAAGTTCTGGCTCGTTGGACAGACTGTCGCTATTACCCTGCCAAGATTGAAGCAATTAACAAAGAAGGAACATTTACA GTTCAGTTTTATGATGGAGTAATTCGTTGTTTAAAAAGAATGCACATTAAAGCCATGCCCGAGGATGCTAAGGGGCAGGTGAAATCCCAG CATCCACTAAGCTGGTGTTGTCCTATCGACCCAGCTGGATCGTGTAACCAGTCTATGGGAAGTGAGGATTGGATAGCTTTAGTCAAAGCA GCTGCTGCAGCTGCAGCCAAGAACAAAACAGGGAGTAAACCTCGAACCAGCGCTAACAGCAATAAAGATAAGGATAAAGATGAGAGAAAG TGGTTTAAAGTACCTTCAAAGAAGGAGGAAACTTCAACTTGTATAGCCACACCAGACGTAGAGAAGAAGGAAGATCTGCCTACATCTAGT GAAACATTTGGACTTCATGTAGAGAACGTTCCAAAGATGGTCTTTCCACAGCCAGAGAGCACATTATCAAACAAGAGGAAAAATAATCAA GGCAACTCGTTTCAGGCAAAGAGAGCTCGACTTAACAAGATTACTGGTTTGTTGGCATCCAAAGCTGTTGGGGTTGATGGTGCTGAAAAA AAGGAAGACTACAATGAAACAGCTCCAATGCTGGAGCAGGCGATTTCACCTAAACCTCAAAGTCAGAAAAAAAATGAAGCTGACATTAGC AGTTCTGCCAACACTCAGAAACCTGCACTGTTATCCTCAACTTTGTCTTCAGGGAAGGCTCGCAGCAAGAAATGCAAACATGAATCTGGA GATTCTTCTGGGTGTATAAAACCCCCTAAATCACCACTTTCCCCAGAATTAATACAAGTCGAGGATTTGACGCTTGTATCTCAGCTTTCT TCTTCAGTGATAAATAAAACTAGTCCTCCACAGCCTGTGAATCCCCCTAGACCTTTCAAGCATAGTGAGCGGAGAAGAAGATCTCAGCGT TTAGCCACCTTACCCATGCCTGATGATTCTGTAGAAAAGGTTTCTTCTCCCTCTCCAGCCACTGATGGGAAAGTATTCTCCATCAGTTCT CAAAATCAGCAAGAATCTTCAGTACCAGAGGTGCCTGATGTTGCACATTTGCCACTTGAGAAGCTGGGACCCTGTCTCCCTCTTGACTTA AGTCGTGGTTCAGAAGTTACAGCACCGGTAGCCTCAGATTCCTCTTACCGTAATGAATGTCCCAGGGCAGAAAAAGAGGATACACAGATG CTTCCAAATCCTTCTTCCAAAGCAATAGCTGATGGAAGAGGAGCTCCAGCAGCAGCAGGAATATCGAAAACAGAAAAAAAAGTGAAATTG GAAGACAAAAGCTCAACAGCATTTGGTAAGAGAAAAGAAAAAGATAAGGAAAGAAGAGAGAAGAGAGACAAAGATCACTACAGACCAAAA CAGAAGAAGAAGAAAAAAAAGAAAAAGAAATCTAAGCAACATGACTATTCAGACTATGAAGACAGTTCCCTCGAATTTTTGGAAAGGTGC TCTTCTCCACTAACTCGATCTTCTGGGAGTTCTCTGGCTTCACGAAGCATGTTTACGGAGAAAACTACAACCTATCAGTACCCAAGGGCA ATTCTATCCGTTGATCTTAGTGGTGAAAACTTATCAGATGTAGACTTCCTAGATGATTCTTCAACGGAGAGTTTGCTTCTGAGTGGGGAT GAATACAATCAGGACTTTGATTCAACCAATTTTGAGGAATCTCAGGATGAGGATGATGCTCTTAATGAAATTGTGCGATGTATTTGTGAG ATGGATGAGGAGAATGGCTTCATGATCCAGTGTGAAGAGTGCTTGTGTTGGCAACACAGCGTGTGCATGGGGCTGCTGGAGGAGAGCATT CCAGAGCAGTACATCTGCTATATCTGCCGGGACCCACCAGGTCAGAGGTGGAGTGCAAAATATCGTTATGATAAGGAGTGGTTGAATAAT GGGAGAATGTGCGGGTTATCATTTTTCAAAGAAAATTATTCTCATCTCAATGCCAAAAAGATAGTTTCTACACATCACCTGCTTGCTGAT GTCTATGGTGTTACAGAAGTGCTACACGGGCTACAGCTGAAGATTGGAATACTAAAGAATAAACATCATCCTGACCTTCATCTCTGGGCT TGTTCCGGGAAGCGAAAAGACCAAGATCAAATAATAGCTGGGGTGGAGAAAAAAATAGCTCAAGACACAGTTAATCGAGAAGAAAAGAAA TATGTACAGAACCATAAAGAACCACCTCGTTTGCCCCTAAAAATGGAAGGAACTTATATAACAAGTGAGCATAGCTATCAAAAGCCACAA AGTTTTGGTCAGGACTGTAAATCTCTCGCAGACCCTGGGAGCTCAGATGATGATGATGTTAGTAGTTTGGAAGAAGAACAAGAATTCCAC ATGAGAAGTAAAAACAGTTTACAGTACTCAGCAAAAGAACATGGAATGCCTGAAAAGAATCCAGCTGAAGGGAATACAGTATTTGTTTAT AATGATAAAAAGGGCACCGAAGACCCAGGAGACTCACATCTTCAGTGGCAGCTCAATCTCCTTACACACATAGAAAATGTGCAGAACGAA GTTACCAGCAGGATGGACCTAATAGAAAAAGAAGTCGATGTTCTGGAAAGCTGGCTTGATTTCACAGGGGAGTTGGAGCCACCAGATCCT CTTGCAAGATTGCCCCAACTTAAACGCCACATAAAACAGCTCCTAATTGACATGGGCAAAGTACAGCAGATAGCAACTCTTTGCTCTGTA >In-frame_EIF3E_ENST00000220849_chr8_109240496_-_PHF20L1_ENST00000337920_chr8_133806656_+_1497nt ATGGCGGAGTACGACTTGACTACTCGCATCGCGCACTTTTTGGATCGGCATCTAGTCTTTCCGCTTCTTGAATTTCTCTCTGTAAAGGAG ATATATAATGAAAAGGAATTATTACAAGGTAAATTGGACCTTCTTAGTGATACCAACATGGTAGACTTTGCTATGGATGTATACAAAAAC CTTTATTCTGATGATATTCCTCATGCTTTGAGAGAGAAAAGAACCACAGTGGTTGCACAACTGAAACAGCTTCAGGCAGAAACAGAACCA ATTGTGAAGATGTTTGAAGATCCAGAAACTACAAGGCAAATGCAGTCAACCAGGGATGGTAGGATGCTCTTTGACTACCTGGCGGACAAG CATGGTTTTAGGCAGGAATATTTAGATACACTCTACAGATATGCAAAATTCCAGTACGAATGTGGGAATTACTCAGGAGCAGCAGAATAT CTTTATTTTTTTAGAGTGCTGGTTCCAGCAACAGATAGAAATGCTTTAAGTTCACTCTGGGGAAAGCTGGCCTCTGAAATCTTAATGCAG AATTGGGATGCAGCCATGGAAGACCTTACACGGTTAAAAGAGACCATAGATAATAATTCTGTGAGTTCTCCACTTCAGTCTCTTCAGCAG AGAACATGGCTCATTCACTGGTCTCTGTTTGTTTTCTTCAATCACCCCAAAGGTCGCGATAATATTATTGACCTCTTCCTTTATCAGCCA CAGTATCCATCACGAATTGAAAAAATTGACTATGAGGAGGGCAAGATGTTGGTCCATTTTGAGCGCTGGAGTCATCGTTATGATGAGTGG ATTTACTGGGATAGCAATAGATTGCGACCCCTTGAGAGACCAGCACTAAGAAAAGAAGGGCTAAAAGATGAGGAAGATTTCTTTGATTTT AAAGCTGGAGAAGAAGTTCTGGCTCGTTGGACAGACTGTCGCTATTACCCTGCCAAGATTGAAGCAATTAACAAAGAAGGAACATTTACA GTTCAGTTTTATGATGGAGTAATTCGTTGTTTAAAAAGAATGCACATTAAAGCCATGCCCGAGGATGCTAAGGGGCAGGATTGGATAGCT TTAGTCAAAGCAGCTGCTGCAGCTGCAGCCAAGAACAAAACAGGGAGTAAACCTCGAACCAGCGCTAACAGCAATAAAGATAAGGATAAA GATGAGAGAAAGTGGTTTAAAGTACCTTCAAAGAAGGAGGAAACTTCAACTTGTATAGCCACACCAGACGTAGAGAAGAAGGAAGATCTG CCTACATCTAGTGAAACATTTGGACTTCATGTAGAGAACGTTCCAAAGATGGTCTTTCCACAGCCAGAGAGCACATTATCAAACAAGAGG AAAAATAATCAAGGCAACTCGTTTCAGGCAAAGAGAGCTCGACTTAACAAGATTACTGGTTTGTTGGCATCCAAAGCTGTTGGGGTTGAT >In-frame_EIF3E_ENST00000220849_chr8_109240496_-_PHF20L1_ENST00000395376_chr8_133806656_+_1590nt ATGGCGGAGTACGACTTGACTACTCGCATCGCGCACTTTTTGGATCGGCATCTAGTCTTTCCGCTTCTTGAATTTCTCTCTGTAAAGGAG ATATATAATGAAAAGGAATTATTACAAGGTAAATTGGACCTTCTTAGTGATACCAACATGGTAGACTTTGCTATGGATGTATACAAAAAC CTTTATTCTGATGATATTCCTCATGCTTTGAGAGAGAAAAGAACCACAGTGGTTGCACAACTGAAACAGCTTCAGGCAGAAACAGAACCA ATTGTGAAGATGTTTGAAGATCCAGAAACTACAAGGCAAATGCAGTCAACCAGGGATGGTAGGATGCTCTTTGACTACCTGGCGGACAAG CATGGTTTTAGGCAGGAATATTTAGATACACTCTACAGATATGCAAAATTCCAGTACGAATGTGGGAATTACTCAGGAGCAGCAGAATAT CTTTATTTTTTTAGAGTGCTGGTTCCAGCAACAGATAGAAATGCTTTAAGTTCACTCTGGGGAAAGCTGGCCTCTGAAATCTTAATGCAG AATTGGGATGCAGCCATGGAAGACCTTACACGGTTAAAAGAGACCATAGATAATAATTCTGTGAGTTCTCCACTTCAGTCTCTTCAGCAG AGAACATGGCTCATTCACTGGTCTCTGTTTGTTTTCTTCAATCACCCCAAAGGTCGCGATAATATTATTGACCTCTTCCTTTATCAGCCA CAGTATCCATCACGAATTGAAAAAATTGACTATGAGGAGGGCAAGATGTTGGTCCATTTTGAGCGCTGGAGTCATCGTTATGATGAGTGG ATTTACTGGGATAGCAATAGATTGCGACCCCTTGAGAGACCAGCACTAAGAAAAGAAGGGCTAAAAGATGAGGAAGATTTCTTTGATTTT AAAGCTGGAGAAGAAGTTCTGGCTCGTTGGACAGACTGTCGCTATTACCCTGCCAAGATTGAAGCAATTAACAAAGAAGGAACATTTACA GTTCAGTTTTATGATGGAGTAATTCGTTGTTTAAAAAGAATGCACATTAAAGCCATGCCCGAGGATGCTAAGGGGCAGTTTCTGTTCCAG GTGAAATCCCAGCATCCACTAAGCTGGTGTTGTCCTATCGACCCAGCTGGATCGTGTAACCAGTCTATGGGAAGTGAGGATTGGATAGCT TTAGTCAAAGCAGCTGCTGCAGCTGCAGCCAAGAACAAAACAGGGAGTAAACCTCGAACCAGCGCTAACAGCAATAAAGATAAGGATAAA GATGAGAGAAAGTGGTTTAAAGTACCTTCAAAGAAGGAGGAAACTTCAACTTGTATAGCCACACCAGACGTAGAGAAGAAGGAAGATCTG CCTACATCTAGTGAAACATTTGTAGGACTTCATGTAGAGAACGTTCCAAAGATGGTCTTTCCACAGCCAGAGAGCACATTATCAAACAAG AGGAAAAATAATCAAGGCAACTCGTTTCAGGCAAAGAGAGCTCGACTTAACAAGATTACTGGTTTGTTGGCATCCAAAGCTGTTGGGGTT |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_EIF3E_ENST00000220849_chr8_109240496_-_PHF20L1_ENST00000395386_chr8_133806656_+_6640nt TGTTCGTTTGTCGGCGCTACCAATAAAGTTTTAGTGAGCACAGACTCCCTTTTCTTTGGCAAGATGGCGGAGTACGACTTGACTACTCGC ATCGCGCACTTTTTGGATCGGCATCTAGTCTTTCCGCTTCTTGAATTTCTCTCTGTAAAGGAGATATATAATGAAAAGGAATTATTACAA GGTAAATTGGACCTTCTTAGTGATACCAACATGGTAGACTTTGCTATGGATGTATACAAAAACCTTTATTCTGATGATATTCCTCATGCT TTGAGAGAGAAAAGAACCACAGTGGTTGCACAACTGAAACAGCTTCAGGCAGAAACAGAACCAATTGTGAAGATGTTTGAAGATCCAGAA ACTACAAGGCAAATGCAGTCAACCAGGGATGGTAGGATGCTCTTTGACTACCTGGCGGACAAGCATGGTTTTAGGCAGGAATATTTAGAT ACACTCTACAGATATGCAAAATTCCAGTACGAATGTGGGAATTACTCAGGAGCAGCAGAATATCTTTATTTTTTTAGAGTGCTGGTTCCA GCAACAGATAGAAATGCTTTAAGTTCACTCTGGGGAAAGCTGGCCTCTGAAATCTTAATGCAGAATTGGGATGCAGCCATGGAAGACCTT ACACGGTTAAAAGAGACCATAGATAATAATTCTGTGAGTTCTCCACTTCAGTCTCTTCAGCAGAGAACATGGCTCATTCACTGGTCTCTG TTTGTTTTCTTCAATCACCCCAAAGGTCGCGATAATATTATTGACCTCTTCCTTTATCAGCCACAGTATCCATCACGAATTGAAAAAATT GACTATGAGGAGGGCAAGATGTTGGTCCATTTTGAGCGCTGGAGTCATCGTTATGATGAGTGGATTTACTGGGATAGCAATAGATTGCGA CCCCTTGAGAGACCAGCACTAAGAAAAGAAGGGCTAAAAGATGAGGAAGATTTCTTTGATTTTAAAGCTGGAGAAGAAGTTCTGGCTCGT TGGACAGACTGTCGCTATTACCCTGCCAAGATTGAAGCAATTAACAAAGAAGGAACATTTACAGTTCAGTTTTATGATGGAGTAATTCGT TGTTTAAAAAGAATGCACATTAAAGCCATGCCCGAGGATGCTAAGGGGCAGGTGAAATCCCAGCATCCACTAAGCTGGTGTTGTCCTATC GACCCAGCTGGATCGTGTAACCAGTCTATGGGAAGTGAGGATTGGATAGCTTTAGTCAAAGCAGCTGCTGCAGCTGCAGCCAAGAACAAA ACAGGGAGTAAACCTCGAACCAGCGCTAACAGCAATAAAGATAAGGATAAAGATGAGAGAAAGTGGTTTAAAGTACCTTCAAAGAAGGAG GAAACTTCAACTTGTATAGCCACACCAGACGTAGAGAAGAAGGAAGATCTGCCTACATCTAGTGAAACATTTGGACTTCATGTAGAGAAC GTTCCAAAGATGGTCTTTCCACAGCCAGAGAGCACATTATCAAACAAGAGGAAAAATAATCAAGGCAACTCGTTTCAGGCAAAGAGAGCT CGACTTAACAAGATTACTGGTTTGTTGGCATCCAAAGCTGTTGGGGTTGATGGTGCTGAAAAAAAGGAAGACTACAATGAAACAGCTCCA ATGCTGGAGCAGGCGATTTCACCTAAACCTCAAAGTCAGAAAAAAAATGAAGCTGACATTAGCAGTTCTGCCAACACTCAGAAACCTGCA CTGTTATCCTCAACTTTGTCTTCAGGGAAGGCTCGCAGCAAGAAATGCAAACATGAATCTGGAGATTCTTCTGGGTGTATAAAACCCCCT AAATCACCACTTTCCCCAGAATTAATACAAGTCGAGGATTTGACGCTTGTATCTCAGCTTTCTTCTTCAGTGATAAATAAAACTAGTCCT CCACAGCCTGTGAATCCCCCTAGACCTTTCAAGCATAGTGAGCGGAGAAGAAGATCTCAGCGTTTAGCCACCTTACCCATGCCTGATGAT TCTGTAGAAAAGGTTTCTTCTCCCTCTCCAGCCACTGATGGGAAAGTATTCTCCATCAGTTCTCAAAATCAGCAAGAATCTTCAGTACCA GAGGTGCCTGATGTTGCACATTTGCCACTTGAGAAGCTGGGACCCTGTCTCCCTCTTGACTTAAGTCGTGGTTCAGAAGTTACAGCACCG GTAGCCTCAGATTCCTCTTACCGTAATGAATGTCCCAGGGCAGAAAAAGAGGATACACAGATGCTTCCAAATCCTTCTTCCAAAGCAATA GCTGATGGAAGAGGAGCTCCAGCAGCAGCAGGAATATCGAAAACAGAAAAAAAAGTGAAATTGGAAGACAAAAGCTCAACAGCATTTGGT AAGAGAAAAGAAAAAGATAAGGAAAGAAGAGAGAAGAGAGACAAAGATCACTACAGACCAAAACAGAAGAAGAAGAAAAAAAAGAAAAAG AAATCTAAGCAACATGACTATTCAGACTATGAAGACAGTTCCCTCGAATTTTTGGAAAGGTGCTCTTCTCCACTAACTCGATCTTCTGGG AGTTCTCTGGCTTCACGAAGCATGTTTACGGAGAAAACTACAACCTATCAGTACCCAAGGGCAATTCTATCCGTTGATCTTAGTGGTGAA AACTTATCAGATGTAGACTTCCTAGATGATTCTTCAACGGAGAGTTTGCTTCTGAGTGGGGATGAATACAATCAGGACTTTGATTCAACC AATTTTGAGGAATCTCAGGATGAGGATGATGCTCTTAATGAAATTGTGCGATGTATTTGTGAGATGGATGAGGAGAATGGCTTCATGATC CAGTGTGAAGAGTGCTTGTGTTGGCAACACAGCGTGTGCATGGGGCTGCTGGAGGAGAGCATTCCAGAGCAGTACATCTGCTATATCTGC CGGGACCCACCAGGTCAGAGGTGGAGTGCAAAATATCGTTATGATAAGGAGTGGTTGAATAATGGGAGAATGTGCGGGTTATCATTTTTC AAAGAAAATTATTCTCATCTCAATGCCAAAAAGATAGTTTCTACACATCACCTGCTTGCTGATGTCTATGGTGTTACAGAAGTGCTACAC GGGCTACAGCTGAAGATTGGAATACTAAAGAATAAACATCATCCTGACCTTCATCTCTGGGCTTGTTCCGGGAAGCGAAAAGACCAAGAT CAAATAATAGCTGGGGTGGAGAAAAAAATAGCTCAAGACACAGTTAATCGAGAAGAAAAGAAATATGTACAGAACCATAAAGAACCACCT CGTTTGCCCCTAAAAATGGAAGGAACTTATATAACAAGTGAGCATAGCTATCAAAAGCCACAAAGTTTTGGTCAGGACTGTAAATCTCTC GCAGACCCTGGGAGCTCAGATGATGATGATGTTAGTAGTTTGGAAGAAGAACAAGAATTCCACATGAGAAGTAAAAACAGTTTACAGTAC TCAGCAAAAGAACATGGAATGCCTGAAAAGAATCCAGCTGAAGGGAATACAGTATTTGTTTATAATGATAAAAAGGGCACCGAAGACCCA GGAGACTCACATCTTCAGTGGCAGCTCAATCTCCTTACACACATAGAAAATGTGCAGAACGAAGTTACCAGCAGGATGGACCTAATAGAA AAAGAAGTCGATGTTCTGGAAAGCTGGCTTGATTTCACAGGGGAGTTGGAGCCACCAGATCCTCTTGCAAGATTGCCCCAACTTAAACGC CACATAAAACAGCTCCTAATTGACATGGGCAAAGTACAGCAGATAGCAACTCTTTGCTCTGTATGACAACAGTGAACACTTAATGAAAGA ATGTGGCTTTCTTCAGTCAAAGCATTTTTATTATCCACGTGATGGCTAAGTGGATAATTTAAAAGCTTAGTAATGTCTGGTCATTCACTG ATTTGTGATGTCAATAGGATGGCACCTTGGAAAGAAAAATGAAGAACAACTTTATCAAGGAAGCTAGTATTTAAAAACAAATTCATGAGC AAGCTGCAAATGAGAATGTGTTATATGCCAAGGAACAATGAAGTAGAATATAATGTATACTAAGGGATTTCAAGTTCTCAGAATTTTTGA GTAGTTGCTTACGTGAAGCTCAAGATACCTGTAGAAAGAAATATGGTATATTTGTATAGTTTTTAATAGAAAGATCTATGTTTATAAACC AGCACTTGGCCAAAAACAAAATTGTAAAGGAAATTTAAATTCTGGAGAATTCTACAGGGTTGCTCTAAGAACTGTCTTCTCAGCAGTTGA TCCAGCTGTACGGAAATTTAGGGTATTTAAACTTTTAAAGGATCATGAGCTGTTTCTTGGGCGATGAATGTTCTCAATCAGAAAACTGAC AGTAGAAATCTCACTTCTGGGGAAAACAGTTGTGGAATTCTTACTTCATTATGAATGTATTTAAAAAACAAACACCAAATAATTGGAATA TATTGCAGGCATTAAGCTCATTAAAAACAAACTGGCTTGCAGAAGGGTCCGATGTGCCAAGTGATCATGATTCTGCTGGAAAGAGGATTT TAAATATTGTGGGAGTTCTCCCACCCTAAGTCTTACATAATGCCACCAGTCCATCCAAAACCTATATATCACCTATACTATATATATCAT ATATATAGTTGAATGGCAGTATTCAGGCTCAACGTACAGTTTGATCCTGAGTATGCTTGGTGTTTGCCTTCAGAAAAAAAAAAATACATT GTAAATAACCTCAGCTGGGATGAGGAGTGACAGAATATCAAAATAATTTGTGGCTGTGGATTTTTTTAACTGCTAGTAGTGGAATACTGG AAAAGCTTCATTTCTGAAGATGAATTTTATTTTTAAAAAATACATGCACACTCAAAACTTTTAGCTTTGATCACAAGTGGACAAATTTCT GAAACCAAAGGCAACTAAGTTGCTGTGTTAGCTCTTGCTGGATTTTGAGCCTAGGTCCTACTGTCTGCCAGTACTCATGTGAGTTGTATG TGCCCCCAGTGCTACATACGCAGGTATGCGTAAGTGTGTATGCTTGTTTTAAACAAACACTCAACGTACATATGTACATAATCTACACAT ATTTATATCACATATCTAGTTTTATTACTATAGACTATACGAATTGGTGGTTAACATGAAATGTTACCTTTTAACAGACTGTTTTTAAAA ATTAAAAATGTATGTATAGGTTTTGAAATTTTTTTAAAAGGGGAGAAAGACTGTTAAGAGGAGGCTATTTGATGACATAACACTTGAATA TTTTATGCCTCATTCTGTTTATCAGTTCTCGCAATCTGTATAAATGCATTTTAGAACTGATAGACAGTAAACTTGAATTTATCTTTGATA AGAATACATGCCACTGTACATTCAGATATTATTTAAATTTGCAAACACATTGTTCTATATGTAAGGGTACTGTATGTAAAACTCTGTATT AAAACTATTCCACATATCCTAAAATTTCAGCTTGCCTTTTTGCGGCCTTATATTTTGATGTAAAGATTAAAAGAATGTGCAAAACAGTCA GAAATTTTTATTGCCTTTTGAGATTCTCCAACTTGACAAATGTGCCAAAGATCAACAGACAGAAAATATCATCCTGTGTATTTACTTGTC ATACTTTAACTTTGTGAAAGATCTTACTGATAAATGAAAAGCTTTAGCAGAGGTGGTATTGTGGGGTAATTGCTTAAATTTACATATCAA AGTAAAAAAGTAGTGCCTGTATTCCATGTGTGGAGTAAATTTGCTAATGTCTATATTTTATGATTGATACTATTATTTTTCCTTTGCATT TTAAAATAGTGGCTCTAATATTTTCCCTGTCATGGCTACATTCTAGACATTGAATTTATATCTTCTTTTTTTCAGATACGGAGCAAATAG CATCCTTAACCTATGAATAATGGTGTTGCCTAGATTCTTGTCACACACACAGAAGACCCTTTGTACCTAGTAACATTCATCCTCTTGATT CCTGGTGAACACGGTTAAATTCATGCACATTTGTTCTTGTAGTTTCTAAAAATTAGATCAATTTATTTGTTAGCCAGCAAATTGAAAATT CCATTATTAGATTAATGAAATTTTTGCTCTGCTTATATGTATACGAACTGGAAATCTGAATTTTTAAATTTAGATCTTTAAATCAAATTA TTTTTATGCATATTTTCATTTAATATAGAGTATACCAATCGATTGAAGCCTTTCACAAGTAGTGCGCTGAGCTTTTCTTATTGAAGAGAG TGAATTAGTTTCTGAGAAGTCAGTCTATTGTGAAAAGTTTCAGATGAGATTATTTTCTTTTAGTCTTTTTAAATATCACTATATGTATTT AAATAGAAGCAATAAACTAGAGAGAGTGTTTCTTGAAAAGACAATGTTTTATTTGCCACCAGGCAGAACAGAATGAGCATTGGTAGAGAA GGCTCCCTCTTGGTATGTTACTGATAAACTTGTACTTCCTCATACTTGTTTGTGGTTCTACTGACTTATTTCCAAACTTAAGAGTAATGT ACTTCGAAAACAACTTGGTTATTCTTTAAATTTCAGGTAAAACCCCTTTTCCTAACACTCATCTTATTTCCACTGTCTTATTTCCTCTCA >In-frame_EIF3E_ENST00000220849_chr8_109240496_-_PHF20L1_ENST00000337920_chr8_133806656_+_2742nt TGTTCGTTTGTCGGCGCTACCAATAAAGTTTTAGTGAGCACAGACTCCCTTTTCTTTGGCAAGATGGCGGAGTACGACTTGACTACTCGC ATCGCGCACTTTTTGGATCGGCATCTAGTCTTTCCGCTTCTTGAATTTCTCTCTGTAAAGGAGATATATAATGAAAAGGAATTATTACAA GGTAAATTGGACCTTCTTAGTGATACCAACATGGTAGACTTTGCTATGGATGTATACAAAAACCTTTATTCTGATGATATTCCTCATGCT TTGAGAGAGAAAAGAACCACAGTGGTTGCACAACTGAAACAGCTTCAGGCAGAAACAGAACCAATTGTGAAGATGTTTGAAGATCCAGAA ACTACAAGGCAAATGCAGTCAACCAGGGATGGTAGGATGCTCTTTGACTACCTGGCGGACAAGCATGGTTTTAGGCAGGAATATTTAGAT ACACTCTACAGATATGCAAAATTCCAGTACGAATGTGGGAATTACTCAGGAGCAGCAGAATATCTTTATTTTTTTAGAGTGCTGGTTCCA GCAACAGATAGAAATGCTTTAAGTTCACTCTGGGGAAAGCTGGCCTCTGAAATCTTAATGCAGAATTGGGATGCAGCCATGGAAGACCTT ACACGGTTAAAAGAGACCATAGATAATAATTCTGTGAGTTCTCCACTTCAGTCTCTTCAGCAGAGAACATGGCTCATTCACTGGTCTCTG TTTGTTTTCTTCAATCACCCCAAAGGTCGCGATAATATTATTGACCTCTTCCTTTATCAGCCACAGTATCCATCACGAATTGAAAAAATT GACTATGAGGAGGGCAAGATGTTGGTCCATTTTGAGCGCTGGAGTCATCGTTATGATGAGTGGATTTACTGGGATAGCAATAGATTGCGA CCCCTTGAGAGACCAGCACTAAGAAAAGAAGGGCTAAAAGATGAGGAAGATTTCTTTGATTTTAAAGCTGGAGAAGAAGTTCTGGCTCGT TGGACAGACTGTCGCTATTACCCTGCCAAGATTGAAGCAATTAACAAAGAAGGAACATTTACAGTTCAGTTTTATGATGGAGTAATTCGT TGTTTAAAAAGAATGCACATTAAAGCCATGCCCGAGGATGCTAAGGGGCAGGATTGGATAGCTTTAGTCAAAGCAGCTGCTGCAGCTGCA GCCAAGAACAAAACAGGGAGTAAACCTCGAACCAGCGCTAACAGCAATAAAGATAAGGATAAAGATGAGAGAAAGTGGTTTAAAGTACCT TCAAAGAAGGAGGAAACTTCAACTTGTATAGCCACACCAGACGTAGAGAAGAAGGAAGATCTGCCTACATCTAGTGAAACATTTGGACTT CATGTAGAGAACGTTCCAAAGATGGTCTTTCCACAGCCAGAGAGCACATTATCAAACAAGAGGAAAAATAATCAAGGCAACTCGTTTCAG GCAAAGAGAGCTCGACTTAACAAGATTACTGGTTTGTTGGCATCCAAAGCTGTTGGGGTTGATGGTGCTGAAAAAAAGGAAGACTACAAT GAAACAGCTCCAATGCTGGAGCAGGTATGAAATGGTAGCATTTGATTTTTTTCAAGGTTCCCACTGGAATGATCACGGAGCTCTAGTATC TACGTAATTGAAATTCCCCTTTTGATCAGATATGGGAATAGGAAGCTAATTAATTGATGATATATTTTTAACTCTGCCTTCTCCAAGGTA TACAGATAACTACAGACTTCATTAGTGTTTGATTTCATAGACTGGCATTAAAGCCTTTGTCTCCAAAATTTGAAGGCCTGGAGACAGGCA TCCCAGGGTATAAGCTTCCAGCTGGATCACCTTTAACTAGCTTACAAAAAGACCCTTACACAAATACTTTCCATTTGTGAGTTAAAACAG GGTTTTTTGACATCGAATAAAGCTTCTTTTGTAAGAAGTTTCTTTTATATTGTAACAATTGGTGTTGTTAGACTGACTATGTGTTTTATG AATTGATCAATGAGCCATACATTTTTGCTAGGATGTATATTTTAATAACTACAAAAAAAGAGAGTTTAAAAAACTATTAAGGGTCTGTCT TTAAACCACCTAATAGAGGAATTTAAAAGTGAAGGTTGCAGTTGCTAGATTTTGCCTTGGCTACCTTCAGATTCCCACAATACTTGTACA TAATGAACTGTGCATGCTTTTACATTCTCTAAGGGCTTAACTTCTTAGGCACTGTAAGACTATAAGAACGCAGTAATAGCCATAACTGGA TTTCCTTGGTTCTCCTGTTTTAAAATCTGAGCCTTAATGTAGTTTTAATATATCCTTTTTGTATTACTTTTCTTTATTAGTAGCCTAATA AAGAAGACTTTGAGTATCTTTTGCTCTCCTCTAGATGCGTTTTAAAAACTATTCCAAATTTAATTGATATTGTATTGAGTTTTTCAGGGT TATTTTAGGCCTGATTTGATAACAATGCGTTGTTTTGGTGCCTCCATTAATGTTGTATTAAATCAATGGGTCTTTTAAATTGATTAATAT GTCATTGAATCATACCTTCTGATTTTCTGTGATCATCCAACGGTTAAGTCTTTGCCGTTATTGTCAATATATCAACCAAATTTTAAATAA CTTTTTTTACTGTGTATTACTATATTCAACGTCCCAGATATAACAATATTTTGTATTTTCACCACTGTTTATGGTATTCTCAGAATGCGA >In-frame_EIF3E_ENST00000220849_chr8_109240496_-_PHF20L1_ENST00000395376_chr8_133806656_+_2835nt TGTTCGTTTGTCGGCGCTACCAATAAAGTTTTAGTGAGCACAGACTCCCTTTTCTTTGGCAAGATGGCGGAGTACGACTTGACTACTCGC ATCGCGCACTTTTTGGATCGGCATCTAGTCTTTCCGCTTCTTGAATTTCTCTCTGTAAAGGAGATATATAATGAAAAGGAATTATTACAA GGTAAATTGGACCTTCTTAGTGATACCAACATGGTAGACTTTGCTATGGATGTATACAAAAACCTTTATTCTGATGATATTCCTCATGCT TTGAGAGAGAAAAGAACCACAGTGGTTGCACAACTGAAACAGCTTCAGGCAGAAACAGAACCAATTGTGAAGATGTTTGAAGATCCAGAA ACTACAAGGCAAATGCAGTCAACCAGGGATGGTAGGATGCTCTTTGACTACCTGGCGGACAAGCATGGTTTTAGGCAGGAATATTTAGAT ACACTCTACAGATATGCAAAATTCCAGTACGAATGTGGGAATTACTCAGGAGCAGCAGAATATCTTTATTTTTTTAGAGTGCTGGTTCCA GCAACAGATAGAAATGCTTTAAGTTCACTCTGGGGAAAGCTGGCCTCTGAAATCTTAATGCAGAATTGGGATGCAGCCATGGAAGACCTT ACACGGTTAAAAGAGACCATAGATAATAATTCTGTGAGTTCTCCACTTCAGTCTCTTCAGCAGAGAACATGGCTCATTCACTGGTCTCTG TTTGTTTTCTTCAATCACCCCAAAGGTCGCGATAATATTATTGACCTCTTCCTTTATCAGCCACAGTATCCATCACGAATTGAAAAAATT GACTATGAGGAGGGCAAGATGTTGGTCCATTTTGAGCGCTGGAGTCATCGTTATGATGAGTGGATTTACTGGGATAGCAATAGATTGCGA CCCCTTGAGAGACCAGCACTAAGAAAAGAAGGGCTAAAAGATGAGGAAGATTTCTTTGATTTTAAAGCTGGAGAAGAAGTTCTGGCTCGT TGGACAGACTGTCGCTATTACCCTGCCAAGATTGAAGCAATTAACAAAGAAGGAACATTTACAGTTCAGTTTTATGATGGAGTAATTCGT TGTTTAAAAAGAATGCACATTAAAGCCATGCCCGAGGATGCTAAGGGGCAGTTTCTGTTCCAGGTGAAATCCCAGCATCCACTAAGCTGG TGTTGTCCTATCGACCCAGCTGGATCGTGTAACCAGTCTATGGGAAGTGAGGATTGGATAGCTTTAGTCAAAGCAGCTGCTGCAGCTGCA GCCAAGAACAAAACAGGGAGTAAACCTCGAACCAGCGCTAACAGCAATAAAGATAAGGATAAAGATGAGAGAAAGTGGTTTAAAGTACCT TCAAAGAAGGAGGAAACTTCAACTTGTATAGCCACACCAGACGTAGAGAAGAAGGAAGATCTGCCTACATCTAGTGAAACATTTGTAGGA CTTCATGTAGAGAACGTTCCAAAGATGGTCTTTCCACAGCCAGAGAGCACATTATCAAACAAGAGGAAAAATAATCAAGGCAACTCGTTT CAGGCAAAGAGAGCTCGACTTAACAAGATTACTGGTTTGTTGGCATCCAAAGCTGTTGGGGTTGATGGTGCTGAAAAAAAGGAAGACTAC AATGAAACAGCTCCAATGCTGGAGCAGGTATGAAATGGTAGCATTTGATTTTTTTCAAGGTTCCCACTGGAATGATCACGGAGCTCTAGT ATCTACGTAATTGAAATTCCCCTTTTGATCAGATATGGGAATAGGAAGCTAATTAATTGATGATATATTTTTAACTCTGCCTTCTCCAAG GTATACAGATAACTACAGACTTCATTAGTGTTTGATTTCATAGACTGGCATTAAAGCCTTTGTCTCCAAAATTTGAAGGCCTGGAGACAG GCATCCCAGGGTATAAGCTTCCAGCTGGATCACCTTTAACTAGCTTACAAAAAGACCCTTACACAAATACTTTCCATTTGTGAGTTAAAA CAGGGTTTTTTGACATCGAATAAAGCTTCTTTTGTAAGAAGTTTCTTTTATATTGTAACAATTGGTGTTGTTAGACTGACTATGTGTTTT ATGAATTGATCAATGAGCCATACATTTTTGCTAGGATGTATATTTTAATAACTACAAAAAAAGAGAGTTTAAAAAACTATTAAGGGTCTG TCTTTAAACCACCTAATAGAGGAATTTAAAAGTGAAGGTTGCAGTTGCTAGATTTTGCCTTGGCTACCTTCAGATTCCCACAATACTTGT ACATAATGAACTGTGCATGCTTTTACATTCTCTAAGGGCTTAACTTCTTAGGCACTGTAAGACTATAAGAACGCAGTAATAGCCATAACT GGATTTCCTTGGTTCTCCTGTTTTAAAATCTGAGCCTTAATGTAGTTTTAATATATCCTTTTTGTATTACTTTTCTTTATTAGTAGCCTA ATAAAGAAGACTTTGAGTATCTTTTGCTCTCCTCTAGATGCGTTTTAAAAACTATTCCAAATTTAATTGATATTGTATTGAGTTTTTCAG GGTTATTTTAGGCCTGATTTGATAACAATGCGTTGTTTTGGTGCCTCCATTAATGTTGTATTAAATCAATGGGTCTTTTAAATTGATTAA TATGTCATTGAATCATACCTTCTGATTTTCTGTGATCATCCAACGGTTAAGTCTTTGCCGTTATTGTCAATATATCAACCAAATTTTAAA TAACTTTTTTTACTGTGTATTACTATATTCAACGTCCCAGATATAACAATATTTTGTATTTTCACCACTGTTTATGGTATTCTCAGAATG |
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FusionGenePPI for EIF3E_PHF20L1 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
EIF3E | PRRC2A, GPBP1L1, RUNDC3A, EIF3A, EIF1B, CNTF, SAP18, MAGED1, RGS2, DDX24, HAP1, GPAA1, NSF, EIF3L, CSN3, COPS6, IFIT1, TRIM27, EIF3H, EIF3F, USP20, DCC, PSMD12, EIF3D, PSMC6, FBXW7, NCOA3, EIF3B, NDRG1, ATM, SIRT7, COPS2, CDK2, EIF3C, EIF3G, EIF3I, EIF3J, EIF3K, SHBG, EIF3M, NAP1L4, SMURF1, YWHAE, POLR2C, DDX3X, FN1, VCAM1, SMAD9, ITGA4, CD81, IGSF8, ICAM1, NPM1, FBXO6, DYNC1LI1, EIF3CL, GNB2L1, RPS10, RPS12, RPS18, RPS19, RPS2, RPS20, RPS23, RPS3, RPS3A, LARP1, RPS25, RPS28, RPS8, RPS9, GPRASP2, STAU1, TRIM63, TRIM55, HUWE1, C4orf19, ZDHHC17, RSPH9, UNK, ANP32A, DIEXF, NIP7, NUMA1, SUPT4H1, NTRK1, HERC2, MAPK1IP1L, XPO1, RPL10, ZNF746, CDH1, EIF4A1, PRRC2B, PTPN22, OCRL, CYLD, SOD1, G3BP1, BRCA1 | PHF20L1 | KAT8, APP, UBC, TERT, LYAR, WWP1, CASP10, ELAVL4, KDM1A, ZNF471, GATAD2B, GATAD2A, MBD2, MBD3, CHD4, CHD3, MTA2, MTA1, MTA3, RBBP7, KPNA4, LIN9, HDAC1, BCL11A, CD14, RNASEH2A, RAB32, CCDC132, FOXK2, FBXW7, KANSL1, HDAC2 |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for EIF3E_PHF20L1 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for EIF3E_PHF20L1 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |