|
Fusion gene ID: 11098 |
FusionGeneSummary for EFTUD2_SIN3A |
Fusion gene summary |
Fusion gene information | Fusion gene name: EFTUD2_SIN3A | Fusion gene ID: 11098 | Hgene | Tgene | Gene symbol | EFTUD2 | SIN3A | Gene ID | 9343 | 25942 |
Gene name | elongation factor Tu GTP binding domain containing 2 | SIN3 transcription regulator family member A | |
Synonyms | MFDGA|MFDM|SNRNP116|Snrp116|Snu114|U5-116KD | WITKOS | |
Cytomap | 17q21.31 | 15q24.2 | |
Type of gene | protein-coding | protein-coding | |
Description | 116 kDa U5 small nuclear ribonucleoprotein componentSNU114 homologU5 snRNP-specific protein, 116 kDaelongation factor Tu GTP-binding domain-containing protein 2hSNU114 | paired amphipathic helix protein Sin3aSIN3 homolog A, transcription regulatorhistone deacetylase complex subunit Sin3atranscriptional co-repressor Sin3Atranscriptional corepressor Sin3atranscriptional regulator, SIN3A | |
Modification date | 20180523 | 20180523 | |
UniProtAcc | Q15029 | Q96ST3 | |
Ensembl transtripts involved in fusion gene | ENST00000426333, ENST00000592576, ENST00000591382, ENST00000402521, ENST00000589211, | ENST00000394947, ENST00000360439, ENST00000394949, ENST00000567289, | |
Fusion gene scores | * DoF score | 10 X 10 X 7=700 | 5 X 5 X 3=75 |
# samples | 11 | 5 | |
** MAII score | log2(11/700*10)=-2.66985139830767 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(5/75*10)=-0.584962500721156 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: EFTUD2 [Title/Abstract] AND SIN3A [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | RV | PRAD | TCGA-J4-A67M-01A | EFTUD2 | chr17 | 42931637 | - | SIN3A | chr15 | 75664550 | - |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
Frame-shift | ENST00000426333 | ENST00000394947 | EFTUD2 | chr17 | 42931637 | - | SIN3A | chr15 | 75664550 | - |
In-frame | ENST00000426333 | ENST00000360439 | EFTUD2 | chr17 | 42931637 | - | SIN3A | chr15 | 75664550 | - |
Frame-shift | ENST00000426333 | ENST00000394949 | EFTUD2 | chr17 | 42931637 | - | SIN3A | chr15 | 75664550 | - |
5CDS-intron | ENST00000426333 | ENST00000567289 | EFTUD2 | chr17 | 42931637 | - | SIN3A | chr15 | 75664550 | - |
Frame-shift | ENST00000592576 | ENST00000394947 | EFTUD2 | chr17 | 42931637 | - | SIN3A | chr15 | 75664550 | - |
In-frame | ENST00000592576 | ENST00000360439 | EFTUD2 | chr17 | 42931637 | - | SIN3A | chr15 | 75664550 | - |
Frame-shift | ENST00000592576 | ENST00000394949 | EFTUD2 | chr17 | 42931637 | - | SIN3A | chr15 | 75664550 | - |
5CDS-intron | ENST00000592576 | ENST00000567289 | EFTUD2 | chr17 | 42931637 | - | SIN3A | chr15 | 75664550 | - |
Frame-shift | ENST00000591382 | ENST00000394947 | EFTUD2 | chr17 | 42931637 | - | SIN3A | chr15 | 75664550 | - |
Frame-shift | ENST00000591382 | ENST00000360439 | EFTUD2 | chr17 | 42931637 | - | SIN3A | chr15 | 75664550 | - |
In-frame | ENST00000591382 | ENST00000394949 | EFTUD2 | chr17 | 42931637 | - | SIN3A | chr15 | 75664550 | - |
5CDS-intron | ENST00000591382 | ENST00000567289 | EFTUD2 | chr17 | 42931637 | - | SIN3A | chr15 | 75664550 | - |
Frame-shift | ENST00000402521 | ENST00000394947 | EFTUD2 | chr17 | 42931637 | - | SIN3A | chr15 | 75664550 | - |
Frame-shift | ENST00000402521 | ENST00000360439 | EFTUD2 | chr17 | 42931637 | - | SIN3A | chr15 | 75664550 | - |
In-frame | ENST00000402521 | ENST00000394949 | EFTUD2 | chr17 | 42931637 | - | SIN3A | chr15 | 75664550 | - |
5CDS-intron | ENST00000402521 | ENST00000567289 | EFTUD2 | chr17 | 42931637 | - | SIN3A | chr15 | 75664550 | - |
intron-3CDS | ENST00000589211 | ENST00000394947 | EFTUD2 | chr17 | 42931637 | - | SIN3A | chr15 | 75664550 | - |
intron-3CDS | ENST00000589211 | ENST00000360439 | EFTUD2 | chr17 | 42931637 | - | SIN3A | chr15 | 75664550 | - |
intron-3CDS | ENST00000589211 | ENST00000394949 | EFTUD2 | chr17 | 42931637 | - | SIN3A | chr15 | 75664550 | - |
intron-intron | ENST00000589211 | ENST00000567289 | EFTUD2 | chr17 | 42931637 | - | SIN3A | chr15 | 75664550 | - |
Top |
FusionProtFeatures for EFTUD2_SIN3A |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
EFTUD2 | SIN3A |
Component of the U5 snRNP and the U4/U6-U5 tri-snRNPcomplex required for pre-mRNA splicing. Binds GTP. | Acts as a transcriptional repressor. Corepressor forREST. Interacts with MXI1 to repress MYC responsive genes andantagonize MYC oncogenic activities. Also interacts with MXD1-MAXheterodimers to repress transcription by tethering SIN3A to DNA.Acts cooperatively with OGT to repress transcription in parallelwith histone deacetylation. Involved in he control of thecircadian rhythms. Required for the transcriptional repression ofcircadian target genes, such as PER1, mediated by the large PERcomplex through histone deacetylation. Cooperates with FOXK1 toregulate cell cycle progression probably by repressing cell cycleinhibitor genes expression (By similarity).{ECO:0000250|UniProtKB:Q60520, ECO:0000269|PubMed:12150998}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Top |
FusionGeneSequence for EFTUD2_SIN3A |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_EFTUD2_ENST00000426333_chr17_42931637_-_SIN3A_ENST00000360439_chr15_75664550_-_859aa MDTDLYDEFGNYIGPELDSDEDDDELGRETKDLDEMDDDDDDDDVGDHDDDHPGMEVVLHEDKKYYPTAEEVYGPEVETIVQEEDTQPLT EPIIKPVKTKKFTLMEQTLPVTVYEMDFLADLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG IKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTERLIKHAVQERLAVTVCINKIDRLILELKLP PTDAYYKLRHIVDEVNGLISMYSTDENLILSPLLGNVCFSSSQYSICFTLGSFAKIYADTFGDINYQEFAKRLWGDIYFNPKTRKFTKKA PTSSSQRSFVEFILEPLYKILAQVVGDVDTSLPRTLDELGIHLTKEELKLNIRPLLRLVCKKFFGEFTGFVDMCVQHIPSPKVGAKPKIE HTYTGGVDSDLGEAMSDCDPDGPLMCHTTKMYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE VNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSELPKMLDGLRKVNKSYPSLTTKVEESGEHVIL GTGELYLDCVMHDLRKMYSEIDIKVADPVVTFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLCDEFPXACKQASTSEIPGLGRXMDQGACAPX >In-frame_EFTUD2_ENST00000592576_chr17_42931637_-_SIN3A_ENST00000360439_chr15_75664550_-_849aa MDTDLYDEFGNYIGPELDSDEDDDELGRETKDLDEMDDDDDDDDVGDHDDDHPGMEVVLHEDKKYYPTAEEVYGPEVETIVQEEDTQPLT EPIIKPVKTKKFTLMEQTLPVTVYEMDFLADLMDNSELIRNVTLCGHLHHGKTHPEIRKRYDQDLCYTDILFTEQERGVGIKSTPVTVVL PDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTERLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRH IVDEVNGLISMYSTDENLILSPLLGNVCFSSSQYSICFTLGSFAKIYADTFGDINYQEFAKRLWGDIYFNPKTRKFTKKAPTSSSQRSFV EFILEPLYKILAQVVGDVDTSLPRTLDELGIHLTKEELKLNIRPLLRLVCKKFFGEFTGFVDMCVQHIPSPKVGAKPKIEHTYTGGVDSD LGEAMSDCDPDGPLMCHTTKMYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIEVNRVPAGNWV LIEGVDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSELPKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCV MHDLRKMYSEIDIKVADPVVTFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQTKYDWDLLAAR SIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLCDEFPXACKQASTSEIPGLGRXMDQGACAPXNGSRDQQVAH >In-frame_EFTUD2_ENST00000591382_chr17_42931637_-_SIN3A_ENST00000394949_chr15_75664550_-_859aa MDTDLYDEFGNYIGPELDSDEDDDELGRETKDLDEMDDDDDDDDVGDHDDDHPGMEVVLHEDKKYYPTAEEVYGPEVETIVQEEDTQPLT EPIIKPVKTKKFTLMEQTLPVTVYEMDFLADLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG IKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTERLIKHAVQERLAVTVCINKIDRLILELKLP PTDAYYKLRHIVDEVNGLISMYSTDENLILSPLLGNVCFSSSQYSICFTLGSFAKIYADTFGDINYQEFAKRLWGDIYFNPKTRKFTKKA PTSSSQRSFVEFILEPLYKILAQVVGDVDTSLPRTLDELGIHLTKEELKLNIRPLLRLVCKKFFGEFTGFVDMCVQHIPSPKVGAKPKIE HTYTGGVDSDLGEAMSDCDPDGPLMCHTTKMYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE VNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSELPKMLDGLRKVNKSYPSLTTKVEESGEHVIL GTGELYLDCVMHDLRKMYSEIDIKVADPVVTFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLCDEFPXACKQASTSEIPGLGRXMDQGACAPX >In-frame_EFTUD2_ENST00000402521_chr17_42931637_-_SIN3A_ENST00000394949_chr15_75664550_-_824aa MDDDDDDDDVGDHDDDHPGMEVVLHEDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFTLMEQTLPVTVYEMDFLADLMDN SELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVGIKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEV TAGLRISDGVVLFIDAAEGVMLNTERLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLILSPLLG NVCFSSSQYSICFTLGSFAKIYADTFGDINYQEFAKRLWGDIYFNPKTRKFTKKAPTSSSQRSFVEFILEPLYKILAQVVGDVDTSLPRT LDELGIHLTKEELKLNIRPLLRLVCKKFFGEFTGFVDMCVQHIPSPKVGAKPKIEHTYTGGVDSDLGEAMSDCDPDGPLMCHTTKMYSTD DGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIEVNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQ IFRPLKFNTTSVIKIAVEPVNPSELPKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVTFCET VVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQTKYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVD KALLGSVKDSIVQGFQWGTREGPLCDEFPXACKQASTSEIPGLGRXMDQGACAPXNGSRDQQVAHGXGAGGPGALYHHLXYRDPAFCEHX |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_EFTUD2_ENST00000426333_chr17_42931637_-_SIN3A_ENST00000360439_chr15_75664550_-_2578nt ATGGATACCGACTTATATGATGAGTTTGGGAATTATATTGGACCAGAGCTTGATTCTGATGAAGATGATGATGAATTGGGTAGAGAGACC AAAGATCTTGATGAGATGGATGATGATGACGACGACGATGACGTAGGAGATCATGACGATGACCACCCTGGGATGGAGGTGGTGCTGCAT GAGGACAAGAAGTACTACCCAACAGCCGAGGAGGTGTATGGTCCTGAGGTGGAGACCATAGTTCAAGAGGAAGACACTCAGCCTCTCACA GAACCCATTATTAAGCCAGTGAAAACCAAGAAATTCACTCTGATGGAGCAGACATTACCTGTTACGGTGTATGAGATGGATTTCTTGGCG GATCTGATGGATAACTCAGAGCTCATCAGAAATGTGACCCTTTGTGGACATCTCCACCATGGCAAGACATGTTTTGTGGATTGTTTAATT GAACAGACTCACCCGGAAATCAGAAAGCGCTATGACCAAGATCTGTGCTATACTGACATCCTCTTCACAGAGCAAGAGAGAGGTGTAGGC ATCAAAAGCACTCCTGTGACAGTGGTCTTGCCAGACACCAAAGGAAAATCTTATCTCTTCAATATCATGGACACTCCAGGACATGTGAAT TTCTCTGATGAGGTCACAGCTGGCTTGCGCATCTCAGATGGAGTGGTCCTTTTCATTGATGCTGCTGAGGGGGTGATGCTGAACACAGAG CGGCTGATCAAGCATGCGGTGCAGGAGAGGCTGGCAGTCACTGTGTGCATCAACAAGATTGACCGGCTGATCCTGGAGCTGAAGCTGCCT CCAACTGATGCTTATTACAAGCTGCGCCACATTGTGGATGAGGTCAATGGATTAATAAGCATGTATTCCACTGATGAGAACCTGATCCTT TCCCCACTCCTGGGTAACGTCTGCTTCTCCAGCTCCCAGTACAGCATCTGCTTCACGCTGGGCTCCTTTGCCAAGATCTATGCCGACACC TTTGGTGACATTAATTACCAAGAATTTGCTAAAAGACTCTGGGGTGACATCTACTTCAACCCTAAGACGCGAAAGTTCACCAAAAAGGCC CCAACTAGCAGCTCCCAGAGAAGTTTCGTGGAGTTTATCTTGGAGCCTCTTTATAAGATCCTCGCCCAGGTTGTAGGTGACGTGGACACC AGCCTCCCACGGACCCTAGACGAGCTTGGCATCCACCTGACGAAGGAGGAGCTGAAGCTGAACATCCGCCCCTTGCTCAGGCTGGTCTGC AAAAAGTTCTTTGGCGAGTTCACAGGCTTTGTGGACATGTGTGTGCAGCATATCCCTTCTCCAAAGGTGGGCGCCAAGCCCAAGATTGAG CACACCTACACCGGTGGTGTGGACTCCGACCTCGGCGAGGCTATGAGTGACTGTGACCCTGATGGCCCCCTGATGTGCCACACTACTAAG ATGTACAGCACAGATGATGGAGTCCAGTTTCACGCCTTTGGCCGGGTGCTGAGTGGCACCATTCATGCTGGGCAGCCTGTGAAGGTACTG GGGGAGAACTACACCCTGGAGGATGAGGAAGACTCCCAGATATGCACCGTGGGCCGCCTTTGGATCTCTGTGGCCAGGTACCACATCGAG GTGAACCGTGTTCCTGCTGGCAACTGGGTTCTGATTGAAGGTGTTGATCAACCAATTGTGAAGACAGCAACCATAACCGAACCCCGAGGC AATGAGGAGGCTCAGATTTTCCGACCCTTGAAGTTCAATACCACATCTGTTATCAAGATTGCTGTGGAGCCAGTCAACCCCTCAGAGCTG CCCAAGATGCTTGATGGCCTGCGCAAGGTCAACAAGAGCTATCCATCCCTCACCACCAAGGTGGAGGAGTCTGGCGAGCATGTGATCCTG GGCACTGGGGAGCTCTACCTGGACTGTGTGATGCATGATTTGCGGAAGATGTACTCAGAGATAGACATCAAGGTGGCTGACCCAGTTGTC ACGTTTTGTGAGACGGTGGTGGAAACATCCTCCCTCAAGTGCTTTGCTGAAACGCCTAATAAGAAGAACAAGATCACCATGATTGCTGAG CCTCTTGAGAAGGGCCTGGCAGAGGACATAGAGAATGAGGTGGTCCAGATTACGTGGAACAGGAAGAAGCTGGGAGAGTTCTTCCAGACC AAGTACGATTGGGATCTGCTGGCTGCCCGTTCCATCTGGGCTTTTGGCCCTGATGCGACTGGCCCCAACATTCTGGTGGATGATACTCTG CCCTCTGAGGTGGACAAGGCTCTTCTTGGTTCAGTGAAGGACAGCATCGTTCAAGGTTTCCAGTGGGGAACCAGGGAGGGCCCCCTCTGT GATGAATTCCCATGAGCGTGTAAGCAAGCGTCTACATCAGAGATTCCAGGCCTGGGTAGATAAATGGACCAAGGAGCATGTGCCCCGTGA AATGGCAGCAGAGACCAGCAAGTGGCTCATGGGTGAGGGGCTGGAGGGCCTGGTGCCCTGTACCACCACCTGTGATACAGAGACCCTGCA >In-frame_EFTUD2_ENST00000592576_chr17_42931637_-_SIN3A_ENST00000360439_chr15_75664550_-_2548nt ATGGATACCGACTTATATGATGAGTTTGGGAATTATATTGGACCAGAGCTTGATTCTGATGAAGATGATGATGAATTGGGTAGAGAGACC AAAGATCTTGATGAGATGGATGATGATGACGACGACGATGACGTAGGAGATCATGACGATGACCACCCTGGGATGGAGGTGGTGCTGCAT GAGGACAAGAAGTACTACCCAACAGCCGAGGAGGTGTATGGTCCTGAGGTGGAGACCATAGTTCAAGAGGAAGACACTCAGCCTCTCACA GAACCCATTATTAAGCCAGTGAAAACCAAGAAATTCACTCTGATGGAGCAGACATTACCTGTTACGGTGTATGAGATGGATTTCTTGGCG GATCTGATGGATAACTCAGAGCTCATCAGAAATGTGACCCTTTGTGGACATCTCCACCATGGCAAGACTCACCCGGAAATCAGAAAGCGC TATGACCAAGATCTGTGCTATACTGACATCCTCTTCACAGAGCAAGAGAGAGGTGTAGGCATCAAAAGCACTCCTGTGACAGTGGTCTTG CCAGACACCAAAGGAAAATCTTATCTCTTCAATATCATGGACACTCCAGGACATGTGAATTTCTCTGATGAGGTCACAGCTGGCTTGCGC ATCTCAGATGGAGTGGTCCTTTTCATTGATGCTGCTGAGGGGGTGATGCTGAACACAGAGCGGCTGATCAAGCATGCGGTGCAGGAGAGG CTGGCAGTCACTGTGTGCATCAACAAGATTGACCGGCTGATCCTGGAGCTGAAGCTGCCTCCAACTGATGCTTATTACAAGCTGCGCCAC ATTGTGGATGAGGTCAATGGATTAATAAGCATGTATTCCACTGATGAGAACCTGATCCTTTCCCCACTCCTGGGTAACGTCTGCTTCTCC AGCTCCCAGTACAGCATCTGCTTCACGCTGGGCTCCTTTGCCAAGATCTATGCCGACACCTTTGGTGACATTAATTACCAAGAATTTGCT AAAAGACTCTGGGGTGACATCTACTTCAACCCTAAGACGCGAAAGTTCACCAAAAAGGCCCCAACTAGCAGCTCCCAGAGAAGTTTCGTG GAGTTTATCTTGGAGCCTCTTTATAAGATCCTCGCCCAGGTTGTAGGTGACGTGGACACCAGCCTCCCACGGACCCTAGACGAGCTTGGC ATCCACCTGACGAAGGAGGAGCTGAAGCTGAACATCCGCCCCTTGCTCAGGCTGGTCTGCAAAAAGTTCTTTGGCGAGTTCACAGGCTTT GTGGACATGTGTGTGCAGCATATCCCTTCTCCAAAGGTGGGCGCCAAGCCCAAGATTGAGCACACCTACACCGGTGGTGTGGACTCCGAC CTCGGCGAGGCTATGAGTGACTGTGACCCTGATGGCCCCCTGATGTGCCACACTACTAAGATGTACAGCACAGATGATGGAGTCCAGTTT CACGCCTTTGGCCGGGTGCTGAGTGGCACCATTCATGCTGGGCAGCCTGTGAAGGTACTGGGGGAGAACTACACCCTGGAGGATGAGGAA GACTCCCAGATATGCACCGTGGGCCGCCTTTGGATCTCTGTGGCCAGGTACCACATCGAGGTGAACCGTGTTCCTGCTGGCAACTGGGTT CTGATTGAAGGTGTTGATCAACCAATTGTGAAGACAGCAACCATAACCGAACCCCGAGGCAATGAGGAGGCTCAGATTTTCCGACCCTTG AAGTTCAATACCACATCTGTTATCAAGATTGCTGTGGAGCCAGTCAACCCCTCAGAGCTGCCCAAGATGCTTGATGGCCTGCGCAAGGTC AACAAGAGCTATCCATCCCTCACCACCAAGGTGGAGGAGTCTGGCGAGCATGTGATCCTGGGCACTGGGGAGCTCTACCTGGACTGTGTG ATGCATGATTTGCGGAAGATGTACTCAGAGATAGACATCAAGGTGGCTGACCCAGTTGTCACGTTTTGTGAGACGGTGGTGGAAACATCC TCCCTCAAGTGCTTTGCTGAAACGCCTAATAAGAAGAACAAGATCACCATGATTGCTGAGCCTCTTGAGAAGGGCCTGGCAGAGGACATA GAGAATGAGGTGGTCCAGATTACGTGGAACAGGAAGAAGCTGGGAGAGTTCTTCCAGACCAAGTACGATTGGGATCTGCTGGCTGCCCGT TCCATCTGGGCTTTTGGCCCTGATGCGACTGGCCCCAACATTCTGGTGGATGATACTCTGCCCTCTGAGGTGGACAAGGCTCTTCTTGGT TCAGTGAAGGACAGCATCGTTCAAGGTTTCCAGTGGGGAACCAGGGAGGGCCCCCTCTGTGATGAATTCCCATGAGCGTGTAAGCAAGCG TCTACATCAGAGATTCCAGGCCTGGGTAGATAAATGGACCAAGGAGCATGTGCCCCGTGAAATGGCAGCAGAGACCAGCAAGTGGCTCAT GGGTGAGGGGCTGGAGGGCCTGGTGCCCTGTACCACCACCTGTGATACAGAGACCCTGCATTTTGTGAGCATTAACAAGTATCGTGTCAA >In-frame_EFTUD2_ENST00000591382_chr17_42931637_-_SIN3A_ENST00000394949_chr15_75664550_-_2578nt ATGGATACCGACTTATATGATGAGTTTGGGAATTATATTGGACCAGAGCTTGATTCTGATGAAGATGATGATGAATTGGGTAGAGAGACC AAAGATCTTGATGAGATGGATGATGATGACGACGACGATGACGTAGGAGATCATGACGATGACCACCCTGGGATGGAGGTGGTGCTGCAT GAGGACAAGAAGTACTACCCAACAGCCGAGGAGGTGTATGGTCCTGAGGTGGAGACCATAGTTCAAGAGGAAGACACTCAGCCTCTCACA GAACCCATTATTAAGCCAGTGAAAACCAAGAAATTCACTCTGATGGAGCAGACATTACCTGTTACGGTGTATGAGATGGATTTCTTGGCG GATCTGATGGATAACTCAGAGCTCATCAGAAATGTGACCCTTTGTGGACATCTCCACCATGGCAAGACATGTTTTGTGGATTGTTTAATT GAACAGACTCACCCGGAAATCAGAAAGCGCTATGACCAAGATCTGTGCTATACTGACATCCTCTTCACAGAGCAAGAGAGAGGTGTAGGC ATCAAAAGCACTCCTGTGACAGTGGTCTTGCCAGACACCAAAGGAAAATCTTATCTCTTCAATATCATGGACACTCCAGGACATGTGAAT TTCTCTGATGAGGTCACAGCTGGCTTGCGCATCTCAGATGGAGTGGTCCTTTTCATTGATGCTGCTGAGGGGGTGATGCTGAACACAGAG CGGCTGATCAAGCATGCGGTGCAGGAGAGGCTGGCAGTCACTGTGTGCATCAACAAGATTGACCGGCTGATCCTGGAGCTGAAGCTGCCT CCAACTGATGCTTATTACAAGCTGCGCCACATTGTGGATGAGGTCAATGGATTAATAAGCATGTATTCCACTGATGAGAACCTGATCCTT TCCCCACTCCTGGGTAACGTCTGCTTCTCCAGCTCCCAGTACAGCATCTGCTTCACGCTGGGCTCCTTTGCCAAGATCTATGCCGACACC TTTGGTGACATTAATTACCAAGAATTTGCTAAAAGACTCTGGGGTGACATCTACTTCAACCCTAAGACGCGAAAGTTCACCAAAAAGGCC CCAACTAGCAGCTCCCAGAGAAGTTTCGTGGAGTTTATCTTGGAGCCTCTTTATAAGATCCTCGCCCAGGTTGTAGGTGACGTGGACACC AGCCTCCCACGGACCCTAGACGAGCTTGGCATCCACCTGACGAAGGAGGAGCTGAAGCTGAACATCCGCCCCTTGCTCAGGCTGGTCTGC AAAAAGTTCTTTGGCGAGTTCACAGGCTTTGTGGACATGTGTGTGCAGCATATCCCTTCTCCAAAGGTGGGCGCCAAGCCCAAGATTGAG CACACCTACACCGGTGGTGTGGACTCCGACCTCGGCGAGGCTATGAGTGACTGTGACCCTGATGGCCCCCTGATGTGCCACACTACTAAG ATGTACAGCACAGATGATGGAGTCCAGTTTCACGCCTTTGGCCGGGTGCTGAGTGGCACCATTCATGCTGGGCAGCCTGTGAAGGTACTG GGGGAGAACTACACCCTGGAGGATGAGGAAGACTCCCAGATATGCACCGTGGGCCGCCTTTGGATCTCTGTGGCCAGGTACCACATCGAG GTGAACCGTGTTCCTGCTGGCAACTGGGTTCTGATTGAAGGTGTTGATCAACCAATTGTGAAGACAGCAACCATAACCGAACCCCGAGGC AATGAGGAGGCTCAGATTTTCCGACCCTTGAAGTTCAATACCACATCTGTTATCAAGATTGCTGTGGAGCCAGTCAACCCCTCAGAGCTG CCCAAGATGCTTGATGGCCTGCGCAAGGTCAACAAGAGCTATCCATCCCTCACCACCAAGGTGGAGGAGTCTGGCGAGCATGTGATCCTG GGCACTGGGGAGCTCTACCTGGACTGTGTGATGCATGATTTGCGGAAGATGTACTCAGAGATAGACATCAAGGTGGCTGACCCAGTTGTC ACGTTTTGTGAGACGGTGGTGGAAACATCCTCCCTCAAGTGCTTTGCTGAAACGCCTAATAAGAAGAACAAGATCACCATGATTGCTGAG CCTCTTGAGAAGGGCCTGGCAGAGGACATAGAGAATGAGGTGGTCCAGATTACGTGGAACAGGAAGAAGCTGGGAGAGTTCTTCCAGACC AAGTACGATTGGGATCTGCTGGCTGCCCGTTCCATCTGGGCTTTTGGCCCTGATGCGACTGGCCCCAACATTCTGGTGGATGATACTCTG CCCTCTGAGGTGGACAAGGCTCTTCTTGGTTCAGTGAAGGACAGCATCGTTCAAGGTTTCCAGTGGGGAACCAGGGAGGGCCCCCTCTGT GATGAATTCCCATGAGCGTGTAAGCAAGCGTCTACATCAGAGATTCCAGGCCTGGGTAGATAAATGGACCAAGGAGCATGTGCCCCGTGA AATGGCAGCAGAGACCAGCAAGTGGCTCATGGGTGAGGGGCTGGAGGGCCTGGTGCCCTGTACCACCACCTGTGATACAGAGACCCTGCA >In-frame_EFTUD2_ENST00000402521_chr17_42931637_-_SIN3A_ENST00000394949_chr15_75664550_-_2473nt ATGGATGATGATGACGACGACGATGACGTAGGAGATCATGACGATGACCACCCTGGGATGGAGGTGGTGCTGCATGAGGACAAGAAGTAC TACCCAACAGCCGAGGAGGTGTATGGTCCTGAGGTGGAGACCATAGTTCAAGAGGAAGACACTCAGCCTCTCACAGAACCCATTATTAAG CCAGTGAAAACCAAGAAATTCACTCTGATGGAGCAGACATTACCTGTTACGGTGTATGAGATGGATTTCTTGGCGGATCTGATGGATAAC TCAGAGCTCATCAGAAATGTGACCCTTTGTGGACATCTCCACCATGGCAAGACATGTTTTGTGGATTGTTTAATTGAACAGACTCACCCG GAAATCAGAAAGCGCTATGACCAAGATCTGTGCTATACTGACATCCTCTTCACAGAGCAAGAGAGAGGTGTAGGCATCAAAAGCACTCCT GTGACAGTGGTCTTGCCAGACACCAAAGGAAAATCTTATCTCTTCAATATCATGGACACTCCAGGACATGTGAATTTCTCTGATGAGGTC ACAGCTGGCTTGCGCATCTCAGATGGAGTGGTCCTTTTCATTGATGCTGCTGAGGGGGTGATGCTGAACACAGAGCGGCTGATCAAGCAT GCGGTGCAGGAGAGGCTGGCAGTCACTGTGTGCATCAACAAGATTGACCGGCTGATCCTGGAGCTGAAGCTGCCTCCAACTGATGCTTAT TACAAGCTGCGCCACATTGTGGATGAGGTCAATGGATTAATAAGCATGTATTCCACTGATGAGAACCTGATCCTTTCCCCACTCCTGGGT AACGTCTGCTTCTCCAGCTCCCAGTACAGCATCTGCTTCACGCTGGGCTCCTTTGCCAAGATCTATGCCGACACCTTTGGTGACATTAAT TACCAAGAATTTGCTAAAAGACTCTGGGGTGACATCTACTTCAACCCTAAGACGCGAAAGTTCACCAAAAAGGCCCCAACTAGCAGCTCC CAGAGAAGTTTCGTGGAGTTTATCTTGGAGCCTCTTTATAAGATCCTCGCCCAGGTTGTAGGTGACGTGGACACCAGCCTCCCACGGACC CTAGACGAGCTTGGCATCCACCTGACGAAGGAGGAGCTGAAGCTGAACATCCGCCCCTTGCTCAGGCTGGTCTGCAAAAAGTTCTTTGGC GAGTTCACAGGCTTTGTGGACATGTGTGTGCAGCATATCCCTTCTCCAAAGGTGGGCGCCAAGCCCAAGATTGAGCACACCTACACCGGT GGTGTGGACTCCGACCTCGGCGAGGCTATGAGTGACTGTGACCCTGATGGCCCCCTGATGTGCCACACTACTAAGATGTACAGCACAGAT GATGGAGTCCAGTTTCACGCCTTTGGCCGGGTGCTGAGTGGCACCATTCATGCTGGGCAGCCTGTGAAGGTACTGGGGGAGAACTACACC CTGGAGGATGAGGAAGACTCCCAGATATGCACCGTGGGCCGCCTTTGGATCTCTGTGGCCAGGTACCACATCGAGGTGAACCGTGTTCCT GCTGGCAACTGGGTTCTGATTGAAGGTGTTGATCAACCAATTGTGAAGACAGCAACCATAACCGAACCCCGAGGCAATGAGGAGGCTCAG ATTTTCCGACCCTTGAAGTTCAATACCACATCTGTTATCAAGATTGCTGTGGAGCCAGTCAACCCCTCAGAGCTGCCCAAGATGCTTGAT GGCCTGCGCAAGGTCAACAAGAGCTATCCATCCCTCACCACCAAGGTGGAGGAGTCTGGCGAGCATGTGATCCTGGGCACTGGGGAGCTC TACCTGGACTGTGTGATGCATGATTTGCGGAAGATGTACTCAGAGATAGACATCAAGGTGGCTGACCCAGTTGTCACGTTTTGTGAGACG GTGGTGGAAACATCCTCCCTCAAGTGCTTTGCTGAAACGCCTAATAAGAAGAACAAGATCACCATGATTGCTGAGCCTCTTGAGAAGGGC CTGGCAGAGGACATAGAGAATGAGGTGGTCCAGATTACGTGGAACAGGAAGAAGCTGGGAGAGTTCTTCCAGACCAAGTACGATTGGGAT CTGCTGGCTGCCCGTTCCATCTGGGCTTTTGGCCCTGATGCGACTGGCCCCAACATTCTGGTGGATGATACTCTGCCCTCTGAGGTGGAC AAGGCTCTTCTTGGTTCAGTGAAGGACAGCATCGTTCAAGGTTTCCAGTGGGGAACCAGGGAGGGCCCCCTCTGTGATGAATTCCCATGA GCGTGTAAGCAAGCGTCTACATCAGAGATTCCAGGCCTGGGTAGATAAATGGACCAAGGAGCATGTGCCCCGTGAAATGGCAGCAGAGAC CAGCAAGTGGCTCATGGGTGAGGGGCTGGAGGGCCTGGTGCCCTGTACCACCACCTGTGATACAGAGACCCTGCATTTTGTGAGCATTAA |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_EFTUD2_ENST00000426333_chr17_42931637_-_SIN3A_ENST00000360439_chr15_75664550_-_3922nt TTCAGGGTGGTCCCGAGGCGCCTGATCAGATTCGTTCATCCTCAGCTCTCACCCTCTTTGGAGCAGCCCACGTCTTGGGCTACTCGTCTT GGGGACCCGCTACTCCGCCTTGCCAGTCCGCGGCGGGCATACCTCGGAACTGGTCCTCAGGCAGAGGGTTGTCCTCCCGGGCAGAAAGGC GACAGCGGCGTCTGCGGGGTCCTTCCTGGCGGCGGGCGCAGGCGTTTCCTCGGCGTGGGGCGGAAGCACGATCTCCGGCAGCGGCCTGGG AACTCTTAGCTGAGCAGGCGAGAGCATCATGGATACCGACTTATATGATGAGTTTGGGAATTATATTGGACCAGAGCTTGATTCTGATGA AGATGATGATGAATTGGGTAGAGAGACCAAAGATCTTGATGAGATGGATGATGATGACGACGACGATGACGTAGGAGATCATGACGATGA CCACCCTGGGATGGAGGTGGTGCTGCATGAGGACAAGAAGTACTACCCAACAGCCGAGGAGGTGTATGGTCCTGAGGTGGAGACCATAGT TCAAGAGGAAGACACTCAGCCTCTCACAGAACCCATTATTAAGCCAGTGAAAACCAAGAAATTCACTCTGATGGAGCAGACATTACCTGT TACGGTGTATGAGATGGATTTCTTGGCGGATCTGATGGATAACTCAGAGCTCATCAGAAATGTGACCCTTTGTGGACATCTCCACCATGG CAAGACATGTTTTGTGGATTGTTTAATTGAACAGACTCACCCGGAAATCAGAAAGCGCTATGACCAAGATCTGTGCTATACTGACATCCT CTTCACAGAGCAAGAGAGAGGTGTAGGCATCAAAAGCACTCCTGTGACAGTGGTCTTGCCAGACACCAAAGGAAAATCTTATCTCTTCAA TATCATGGACACTCCAGGACATGTGAATTTCTCTGATGAGGTCACAGCTGGCTTGCGCATCTCAGATGGAGTGGTCCTTTTCATTGATGC TGCTGAGGGGGTGATGCTGAACACAGAGCGGCTGATCAAGCATGCGGTGCAGGAGAGGCTGGCAGTCACTGTGTGCATCAACAAGATTGA CCGGCTGATCCTGGAGCTGAAGCTGCCTCCAACTGATGCTTATTACAAGCTGCGCCACATTGTGGATGAGGTCAATGGATTAATAAGCAT GTATTCCACTGATGAGAACCTGATCCTTTCCCCACTCCTGGGTAACGTCTGCTTCTCCAGCTCCCAGTACAGCATCTGCTTCACGCTGGG CTCCTTTGCCAAGATCTATGCCGACACCTTTGGTGACATTAATTACCAAGAATTTGCTAAAAGACTCTGGGGTGACATCTACTTCAACCC TAAGACGCGAAAGTTCACCAAAAAGGCCCCAACTAGCAGCTCCCAGAGAAGTTTCGTGGAGTTTATCTTGGAGCCTCTTTATAAGATCCT CGCCCAGGTTGTAGGTGACGTGGACACCAGCCTCCCACGGACCCTAGACGAGCTTGGCATCCACCTGACGAAGGAGGAGCTGAAGCTGAA CATCCGCCCCTTGCTCAGGCTGGTCTGCAAAAAGTTCTTTGGCGAGTTCACAGGCTTTGTGGACATGTGTGTGCAGCATATCCCTTCTCC AAAGGTGGGCGCCAAGCCCAAGATTGAGCACACCTACACCGGTGGTGTGGACTCCGACCTCGGCGAGGCTATGAGTGACTGTGACCCTGA TGGCCCCCTGATGTGCCACACTACTAAGATGTACAGCACAGATGATGGAGTCCAGTTTCACGCCTTTGGCCGGGTGCTGAGTGGCACCAT TCATGCTGGGCAGCCTGTGAAGGTACTGGGGGAGAACTACACCCTGGAGGATGAGGAAGACTCCCAGATATGCACCGTGGGCCGCCTTTG GATCTCTGTGGCCAGGTACCACATCGAGGTGAACCGTGTTCCTGCTGGCAACTGGGTTCTGATTGAAGGTGTTGATCAACCAATTGTGAA GACAGCAACCATAACCGAACCCCGAGGCAATGAGGAGGCTCAGATTTTCCGACCCTTGAAGTTCAATACCACATCTGTTATCAAGATTGC TGTGGAGCCAGTCAACCCCTCAGAGCTGCCCAAGATGCTTGATGGCCTGCGCAAGGTCAACAAGAGCTATCCATCCCTCACCACCAAGGT GGAGGAGTCTGGCGAGCATGTGATCCTGGGCACTGGGGAGCTCTACCTGGACTGTGTGATGCATGATTTGCGGAAGATGTACTCAGAGAT AGACATCAAGGTGGCTGACCCAGTTGTCACGTTTTGTGAGACGGTGGTGGAAACATCCTCCCTCAAGTGCTTTGCTGAAACGCCTAATAA GAAGAACAAGATCACCATGATTGCTGAGCCTCTTGAGAAGGGCCTGGCAGAGGACATAGAGAATGAGGTGGTCCAGATTACGTGGAACAG GAAGAAGCTGGGAGAGTTCTTCCAGACCAAGTACGATTGGGATCTGCTGGCTGCCCGTTCCATCTGGGCTTTTGGCCCTGATGCGACTGG CCCCAACATTCTGGTGGATGATACTCTGCCCTCTGAGGTGGACAAGGCTCTTCTTGGTTCAGTGAAGGACAGCATCGTTCAAGGTTTCCA GTGGGGAACCAGGGAGGGCCCCCTCTGTGATGAATTCCCATGAGCGTGTAAGCAAGCGTCTACATCAGAGATTCCAGGCCTGGGTAGATA AATGGACCAAGGAGCATGTGCCCCGTGAAATGGCAGCAGAGACCAGCAAGTGGCTCATGGGTGAGGGGCTGGAGGGCCTGGTGCCCTGTA CCACCACCTGTGATACAGAGACCCTGCATTTTGTGAGCATTAACAAGTATCGTGTCAAATACGGCACAGTATTCAAAGCCCCTTAACTGC AAAGCCAGAGCAGATAACTTGGGGTGTGTGTGGGGATGTGTGTGTGGGCCTATGCACTCACACACTGAAGAAACAAGGAAGATGCCTTTC AAGCCTCACTGGGCCTCTCTGGGACATGGCCACCTGACCTGTGTGTGGCTGGTGCAGCCTGGCACCAAGTGGGCTACCTGTTAGGAACAT GAATACCTTACAAAGCTGAAGCTGGAACTTTTCCCAAAGGGTTTTGGGTATAGCCTGCCCTGGAGGGGAAGGAAGTCCATGCAAGCAAAG ACATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGGCCTAACTTTCAATGAGGGAACCGGATGCTGTTCACAC TTTGACTGGATGGAGATGCATTTACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGATTGGAACTATCATGGTCACTGCTCCTCTC CCCTCCCCACAAAAGGAAAAAAAAGCTGGATTTGATTTTTTTTTTCTGGTCACTCGAGCACATCTAAGATCACCCATTAGGTTTTATCTG GGACCTGCAGTTTGGCTTTGGGATTGATCATCTTGTGGATTTTATTCCTGACGATTCCCTTGCTGCCTACCCTTTTCTCTCCTCTGGTTC TCAACCTCAACGAGTTCAAATCAGTTGTCCTTTTTAGCTCCCGTGGAACTGTTTTGTATCTGCCTCTTTACTAGTCTACCTTAGTGCCAT CCACCAGCTTTACTCTCTGACACACACACGCACACACACACACAATTTTAACTTGTTTTTTTGTACATAATGTACATACTGTCAATTTTT TATTAAAAGAAATATGCTTTGATGTGCTAGCATAACTGCTCTAGCTTCTTGTGTACCATAGTACTGTGGCTTCAGATTTAGTACCTATGA ACAGATGTACAAGACATTTATTACACTTTTTACCAAAGGGAGTTACCATTGTAGTACTTTTGTGTAAAACTTGTCTTCCCCTTTGCCCCC >In-frame_EFTUD2_ENST00000592576_chr17_42931637_-_SIN3A_ENST00000360439_chr15_75664550_-_3661nt GGCGTGGGGCGGAAGCACGATCTCCGGCAGCGGCCTGGGAACTCTTAGCTGAGCAGGCGAGAGCATCATGGATACCGACTTATATGATGA GTTTGGGAATTATATTGGACCAGAGCTTGATTCTGATGAAGATGATGATGAATTGGGTAGAGAGACCAAAGATCTTGATGAGATGGATGA TGATGACGACGACGATGACGTAGGAGATCATGACGATGACCACCCTGGGATGGAGGTGGTGCTGCATGAGGACAAGAAGTACTACCCAAC AGCCGAGGAGGTGTATGGTCCTGAGGTGGAGACCATAGTTCAAGAGGAAGACACTCAGCCTCTCACAGAACCCATTATTAAGCCAGTGAA AACCAAGAAATTCACTCTGATGGAGCAGACATTACCTGTTACGGTGTATGAGATGGATTTCTTGGCGGATCTGATGGATAACTCAGAGCT CATCAGAAATGTGACCCTTTGTGGACATCTCCACCATGGCAAGACTCACCCGGAAATCAGAAAGCGCTATGACCAAGATCTGTGCTATAC TGACATCCTCTTCACAGAGCAAGAGAGAGGTGTAGGCATCAAAAGCACTCCTGTGACAGTGGTCTTGCCAGACACCAAAGGAAAATCTTA TCTCTTCAATATCATGGACACTCCAGGACATGTGAATTTCTCTGATGAGGTCACAGCTGGCTTGCGCATCTCAGATGGAGTGGTCCTTTT CATTGATGCTGCTGAGGGGGTGATGCTGAACACAGAGCGGCTGATCAAGCATGCGGTGCAGGAGAGGCTGGCAGTCACTGTGTGCATCAA CAAGATTGACCGGCTGATCCTGGAGCTGAAGCTGCCTCCAACTGATGCTTATTACAAGCTGCGCCACATTGTGGATGAGGTCAATGGATT AATAAGCATGTATTCCACTGATGAGAACCTGATCCTTTCCCCACTCCTGGGTAACGTCTGCTTCTCCAGCTCCCAGTACAGCATCTGCTT CACGCTGGGCTCCTTTGCCAAGATCTATGCCGACACCTTTGGTGACATTAATTACCAAGAATTTGCTAAAAGACTCTGGGGTGACATCTA CTTCAACCCTAAGACGCGAAAGTTCACCAAAAAGGCCCCAACTAGCAGCTCCCAGAGAAGTTTCGTGGAGTTTATCTTGGAGCCTCTTTA TAAGATCCTCGCCCAGGTTGTAGGTGACGTGGACACCAGCCTCCCACGGACCCTAGACGAGCTTGGCATCCACCTGACGAAGGAGGAGCT GAAGCTGAACATCCGCCCCTTGCTCAGGCTGGTCTGCAAAAAGTTCTTTGGCGAGTTCACAGGCTTTGTGGACATGTGTGTGCAGCATAT CCCTTCTCCAAAGGTGGGCGCCAAGCCCAAGATTGAGCACACCTACACCGGTGGTGTGGACTCCGACCTCGGCGAGGCTATGAGTGACTG TGACCCTGATGGCCCCCTGATGTGCCACACTACTAAGATGTACAGCACAGATGATGGAGTCCAGTTTCACGCCTTTGGCCGGGTGCTGAG TGGCACCATTCATGCTGGGCAGCCTGTGAAGGTACTGGGGGAGAACTACACCCTGGAGGATGAGGAAGACTCCCAGATATGCACCGTGGG CCGCCTTTGGATCTCTGTGGCCAGGTACCACATCGAGGTGAACCGTGTTCCTGCTGGCAACTGGGTTCTGATTGAAGGTGTTGATCAACC AATTGTGAAGACAGCAACCATAACCGAACCCCGAGGCAATGAGGAGGCTCAGATTTTCCGACCCTTGAAGTTCAATACCACATCTGTTAT CAAGATTGCTGTGGAGCCAGTCAACCCCTCAGAGCTGCCCAAGATGCTTGATGGCCTGCGCAAGGTCAACAAGAGCTATCCATCCCTCAC CACCAAGGTGGAGGAGTCTGGCGAGCATGTGATCCTGGGCACTGGGGAGCTCTACCTGGACTGTGTGATGCATGATTTGCGGAAGATGTA CTCAGAGATAGACATCAAGGTGGCTGACCCAGTTGTCACGTTTTGTGAGACGGTGGTGGAAACATCCTCCCTCAAGTGCTTTGCTGAAAC GCCTAATAAGAAGAACAAGATCACCATGATTGCTGAGCCTCTTGAGAAGGGCCTGGCAGAGGACATAGAGAATGAGGTGGTCCAGATTAC GTGGAACAGGAAGAAGCTGGGAGAGTTCTTCCAGACCAAGTACGATTGGGATCTGCTGGCTGCCCGTTCCATCTGGGCTTTTGGCCCTGA TGCGACTGGCCCCAACATTCTGGTGGATGATACTCTGCCCTCTGAGGTGGACAAGGCTCTTCTTGGTTCAGTGAAGGACAGCATCGTTCA AGGTTTCCAGTGGGGAACCAGGGAGGGCCCCCTCTGTGATGAATTCCCATGAGCGTGTAAGCAAGCGTCTACATCAGAGATTCCAGGCCT GGGTAGATAAATGGACCAAGGAGCATGTGCCCCGTGAAATGGCAGCAGAGACCAGCAAGTGGCTCATGGGTGAGGGGCTGGAGGGCCTGG TGCCCTGTACCACCACCTGTGATACAGAGACCCTGCATTTTGTGAGCATTAACAAGTATCGTGTCAAATACGGCACAGTATTCAAAGCCC CTTAACTGCAAAGCCAGAGCAGATAACTTGGGGTGTGTGTGGGGATGTGTGTGTGGGCCTATGCACTCACACACTGAAGAAACAAGGAAG ATGCCTTTCAAGCCTCACTGGGCCTCTCTGGGACATGGCCACCTGACCTGTGTGTGGCTGGTGCAGCCTGGCACCAAGTGGGCTACCTGT TAGGAACATGAATACCTTACAAAGCTGAAGCTGGAACTTTTCCCAAAGGGTTTTGGGTATAGCCTGCCCTGGAGGGGAAGGAAGTCCATG CAAGCAAAGACATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGGCCTAACTTTCAATGAGGGAACCGGATGC TGTTCACACTTTGACTGGATGGAGATGCATTTACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGATTGGAACTATCATGGTCACT GCTCCTCTCCCCTCCCCACAAAAGGAAAAAAAAGCTGGATTTGATTTTTTTTTTCTGGTCACTCGAGCACATCTAAGATCACCCATTAGG TTTTATCTGGGACCTGCAGTTTGGCTTTGGGATTGATCATCTTGTGGATTTTATTCCTGACGATTCCCTTGCTGCCTACCCTTTTCTCTC CTCTGGTTCTCAACCTCAACGAGTTCAAATCAGTTGTCCTTTTTAGCTCCCGTGGAACTGTTTTGTATCTGCCTCTTTACTAGTCTACCT TAGTGCCATCCACCAGCTTTACTCTCTGACACACACACGCACACACACACACAATTTTAACTTGTTTTTTTGTACATAATGTACATACTG TCAATTTTTTATTAAAAGAAATATGCTTTGATGTGCTAGCATAACTGCTCTAGCTTCTTGTGTACCATAGTACTGTGGCTTCAGATTTAG TACCTATGAACAGATGTACAAGACATTTATTACACTTTTTACCAAAGGGAGTTACCATTGTAGTACTTTTGTGTAAAACTTGTCTTCCCC >In-frame_EFTUD2_ENST00000591382_chr17_42931637_-_SIN3A_ENST00000394949_chr15_75664550_-_3825nt GTAAGTTGAAGCGGGTCAGCGGCACGGAAGGGTTGCTCCAGGTGGGATAGGAAATTAAAAAGCGTCAGATCTGGAAGGGGCCTTATATGC TATTGGCCCCTTTCGCTTTACGGATCGGTAAATTGAGGCCTGGAGCGGGAAAAAGAATGGAAGACCCTGTCGTCCTCGTGCCTTCCCAAG GCTTCCGAAGCGCGCACACACGCACACACCTCGATTTCGGGGCTGCCTCTATAGCCTCAGTCCGTAAAATCGTATCGCTAGGTAGGAGTG GTGCTCTAACTGTCCAGTCCCCTCGCTCACTTCCTCTTCTATCCGTGCCGCTTTCAGCCGTTCTTTGCCAAGTTCCCTCCGAAGTCCTCT GAGCTCCTGCATTGTAGCGGGAAGCGGCAGTGAGCATCATGGATACCGACTTATATGATGAGTTTGGGAATTATATTGGACCAGAGCTTG ATTCTGATGAAGATGATGATGAATTGGGTAGAGAGACCAAAGATCTTGATGAGATGGATGATGATGACGACGACGATGACGTAGGAGATC ATGACGATGACCACCCTGGGATGGAGGTGGTGCTGCATGAGGACAAGAAGTACTACCCAACAGCCGAGGAGGTGTATGGTCCTGAGGTGG AGACCATAGTTCAAGAGGAAGACACTCAGCCTCTCACAGAACCCATTATTAAGCCAGTGAAAACCAAGAAATTCACTCTGATGGAGCAGA CATTACCTGTTACGGTGTATGAGATGGATTTCTTGGCGGATCTGATGGATAACTCAGAGCTCATCAGAAATGTGACCCTTTGTGGACATC TCCACCATGGCAAGACATGTTTTGTGGATTGTTTAATTGAACAGACTCACCCGGAAATCAGAAAGCGCTATGACCAAGATCTGTGCTATA CTGACATCCTCTTCACAGAGCAAGAGAGAGGTGTAGGCATCAAAAGCACTCCTGTGACAGTGGTCTTGCCAGACACCAAAGGAAAATCTT ATCTCTTCAATATCATGGACACTCCAGGACATGTGAATTTCTCTGATGAGGTCACAGCTGGCTTGCGCATCTCAGATGGAGTGGTCCTTT TCATTGATGCTGCTGAGGGGGTGATGCTGAACACAGAGCGGCTGATCAAGCATGCGGTGCAGGAGAGGCTGGCAGTCACTGTGTGCATCA ACAAGATTGACCGGCTGATCCTGGAGCTGAAGCTGCCTCCAACTGATGCTTATTACAAGCTGCGCCACATTGTGGATGAGGTCAATGGAT TAATAAGCATGTATTCCACTGATGAGAACCTGATCCTTTCCCCACTCCTGGGTAACGTCTGCTTCTCCAGCTCCCAGTACAGCATCTGCT TCACGCTGGGCTCCTTTGCCAAGATCTATGCCGACACCTTTGGTGACATTAATTACCAAGAATTTGCTAAAAGACTCTGGGGTGACATCT ACTTCAACCCTAAGACGCGAAAGTTCACCAAAAAGGCCCCAACTAGCAGCTCCCAGAGAAGTTTCGTGGAGTTTATCTTGGAGCCTCTTT ATAAGATCCTCGCCCAGGTTGTAGGTGACGTGGACACCAGCCTCCCACGGACCCTAGACGAGCTTGGCATCCACCTGACGAAGGAGGAGC TGAAGCTGAACATCCGCCCCTTGCTCAGGCTGGTCTGCAAAAAGTTCTTTGGCGAGTTCACAGGCTTTGTGGACATGTGTGTGCAGCATA TCCCTTCTCCAAAGGTGGGCGCCAAGCCCAAGATTGAGCACACCTACACCGGTGGTGTGGACTCCGACCTCGGCGAGGCTATGAGTGACT GTGACCCTGATGGCCCCCTGATGTGCCACACTACTAAGATGTACAGCACAGATGATGGAGTCCAGTTTCACGCCTTTGGCCGGGTGCTGA GTGGCACCATTCATGCTGGGCAGCCTGTGAAGGTACTGGGGGAGAACTACACCCTGGAGGATGAGGAAGACTCCCAGATATGCACCGTGG GCCGCCTTTGGATCTCTGTGGCCAGGTACCACATCGAGGTGAACCGTGTTCCTGCTGGCAACTGGGTTCTGATTGAAGGTGTTGATCAAC CAATTGTGAAGACAGCAACCATAACCGAACCCCGAGGCAATGAGGAGGCTCAGATTTTCCGACCCTTGAAGTTCAATACCACATCTGTTA TCAAGATTGCTGTGGAGCCAGTCAACCCCTCAGAGCTGCCCAAGATGCTTGATGGCCTGCGCAAGGTCAACAAGAGCTATCCATCCCTCA CCACCAAGGTGGAGGAGTCTGGCGAGCATGTGATCCTGGGCACTGGGGAGCTCTACCTGGACTGTGTGATGCATGATTTGCGGAAGATGT ACTCAGAGATAGACATCAAGGTGGCTGACCCAGTTGTCACGTTTTGTGAGACGGTGGTGGAAACATCCTCCCTCAAGTGCTTTGCTGAAA CGCCTAATAAGAAGAACAAGATCACCATGATTGCTGAGCCTCTTGAGAAGGGCCTGGCAGAGGACATAGAGAATGAGGTGGTCCAGATTA CGTGGAACAGGAAGAAGCTGGGAGAGTTCTTCCAGACCAAGTACGATTGGGATCTGCTGGCTGCCCGTTCCATCTGGGCTTTTGGCCCTG ATGCGACTGGCCCCAACATTCTGGTGGATGATACTCTGCCCTCTGAGGTGGACAAGGCTCTTCTTGGTTCAGTGAAGGACAGCATCGTTC AAGGTTTCCAGTGGGGAACCAGGGAGGGCCCCCTCTGTGATGAATTCCCATGAGCGTGTAAGCAAGCGTCTACATCAGAGATTCCAGGCC TGGGTAGATAAATGGACCAAGGAGCATGTGCCCCGTGAAATGGCAGCAGAGACCAGCAAGTGGCTCATGGGTGAGGGGCTGGAGGGCCTG GTGCCCTGTACCACCACCTGTGATACAGAGACCCTGCATTTTGTGAGCATTAACAAGTATCGTGTCAAATACGGCACAGTATTCAAAGCC CCTTAACTGCAAAGCCAGAGCAGATAACTTGGGGTGTGTGTGGGGATGTGTGTGTGGGCCTATGCACTCACACACTGAAGAAACAAGGAA GATGCCTTTCAAGCCTCACTGGGCCTCTCTGGGACATGGCCACCTGACCTGTGTGTGGCTGGTGCAGCCTGGCACCAAGTGGGCTACCTG TTAGGAACATGAATACCTTACAAAGCTGAAGCTGGAACTTTTCCCAAAGGGTTTTGGGTATAGCCTGCCCTGGAGGGGAAGGAAGTCCAT GCAAGCAAAGACATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGGCCTAACTTTCAATGAGGGAACCGGATG CTGTTCACACTTTGACTGGATGGAGATGCATTTACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGATTGGAACTATCATGGTCAC TGCTCCTCTCCCCTCCCCACAAAAGGAAAAAAAAGCTGGATTTGATTTTTTTTTTCTGGTCACTCGAGCACATCTAAGATCACCCATTAG GTTTTATCTGGGACCTGCAGTTTGGCTTTGGGATTGATCATCTTGTGGATTTTATTCCTGACGATTCCCTTGCTGCCTACCCTTTTCTCT CCTCTGGTTCTCAACCTCAACGAGTTCAAATCAGTTGTCCTTTTTAGCTCCCGTGGAACTGTTTTGTATCTGCCTCTTTACTAGTCTACC TTAGTGCCATCCACCAGCTTTACTCTCTGACACACACACGCACACACACACACAATTTTAACTTGTTTTTTTGTACATAATGTACATACT >In-frame_EFTUD2_ENST00000402521_chr17_42931637_-_SIN3A_ENST00000394949_chr15_75664550_-_3399nt GCAGGCGTTTCCTCGGCGTGGGGCGGAAGCACGATCTCCGGCAGCGGCCTGGGAACTCTTAGCTGAGCAGGCGAGAGATGGATGATGATG ACGACGACGATGACGTAGGAGATCATGACGATGACCACCCTGGGATGGAGGTGGTGCTGCATGAGGACAAGAAGTACTACCCAACAGCCG AGGAGGTGTATGGTCCTGAGGTGGAGACCATAGTTCAAGAGGAAGACACTCAGCCTCTCACAGAACCCATTATTAAGCCAGTGAAAACCA AGAAATTCACTCTGATGGAGCAGACATTACCTGTTACGGTGTATGAGATGGATTTCTTGGCGGATCTGATGGATAACTCAGAGCTCATCA GAAATGTGACCCTTTGTGGACATCTCCACCATGGCAAGACATGTTTTGTGGATTGTTTAATTGAACAGACTCACCCGGAAATCAGAAAGC GCTATGACCAAGATCTGTGCTATACTGACATCCTCTTCACAGAGCAAGAGAGAGGTGTAGGCATCAAAAGCACTCCTGTGACAGTGGTCT TGCCAGACACCAAAGGAAAATCTTATCTCTTCAATATCATGGACACTCCAGGACATGTGAATTTCTCTGATGAGGTCACAGCTGGCTTGC GCATCTCAGATGGAGTGGTCCTTTTCATTGATGCTGCTGAGGGGGTGATGCTGAACACAGAGCGGCTGATCAAGCATGCGGTGCAGGAGA GGCTGGCAGTCACTGTGTGCATCAACAAGATTGACCGGCTGATCCTGGAGCTGAAGCTGCCTCCAACTGATGCTTATTACAAGCTGCGCC ACATTGTGGATGAGGTCAATGGATTAATAAGCATGTATTCCACTGATGAGAACCTGATCCTTTCCCCACTCCTGGGTAACGTCTGCTTCT CCAGCTCCCAGTACAGCATCTGCTTCACGCTGGGCTCCTTTGCCAAGATCTATGCCGACACCTTTGGTGACATTAATTACCAAGAATTTG CTAAAAGACTCTGGGGTGACATCTACTTCAACCCTAAGACGCGAAAGTTCACCAAAAAGGCCCCAACTAGCAGCTCCCAGAGAAGTTTCG TGGAGTTTATCTTGGAGCCTCTTTATAAGATCCTCGCCCAGGTTGTAGGTGACGTGGACACCAGCCTCCCACGGACCCTAGACGAGCTTG GCATCCACCTGACGAAGGAGGAGCTGAAGCTGAACATCCGCCCCTTGCTCAGGCTGGTCTGCAAAAAGTTCTTTGGCGAGTTCACAGGCT TTGTGGACATGTGTGTGCAGCATATCCCTTCTCCAAAGGTGGGCGCCAAGCCCAAGATTGAGCACACCTACACCGGTGGTGTGGACTCCG ACCTCGGCGAGGCTATGAGTGACTGTGACCCTGATGGCCCCCTGATGTGCCACACTACTAAGATGTACAGCACAGATGATGGAGTCCAGT TTCACGCCTTTGGCCGGGTGCTGAGTGGCACCATTCATGCTGGGCAGCCTGTGAAGGTACTGGGGGAGAACTACACCCTGGAGGATGAGG AAGACTCCCAGATATGCACCGTGGGCCGCCTTTGGATCTCTGTGGCCAGGTACCACATCGAGGTGAACCGTGTTCCTGCTGGCAACTGGG TTCTGATTGAAGGTGTTGATCAACCAATTGTGAAGACAGCAACCATAACCGAACCCCGAGGCAATGAGGAGGCTCAGATTTTCCGACCCT TGAAGTTCAATACCACATCTGTTATCAAGATTGCTGTGGAGCCAGTCAACCCCTCAGAGCTGCCCAAGATGCTTGATGGCCTGCGCAAGG TCAACAAGAGCTATCCATCCCTCACCACCAAGGTGGAGGAGTCTGGCGAGCATGTGATCCTGGGCACTGGGGAGCTCTACCTGGACTGTG TGATGCATGATTTGCGGAAGATGTACTCAGAGATAGACATCAAGGTGGCTGACCCAGTTGTCACGTTTTGTGAGACGGTGGTGGAAACAT CCTCCCTCAAGTGCTTTGCTGAAACGCCTAATAAGAAGAACAAGATCACCATGATTGCTGAGCCTCTTGAGAAGGGCCTGGCAGAGGACA TAGAGAATGAGGTGGTCCAGATTACGTGGAACAGGAAGAAGCTGGGAGAGTTCTTCCAGACCAAGTACGATTGGGATCTGCTGGCTGCCC GTTCCATCTGGGCTTTTGGCCCTGATGCGACTGGCCCCAACATTCTGGTGGATGATACTCTGCCCTCTGAGGTGGACAAGGCTCTTCTTG GTTCAGTGAAGGACAGCATCGTTCAAGGTTTCCAGTGGGGAACCAGGGAGGGCCCCCTCTGTGATGAATTCCCATGAGCGTGTAAGCAAG CGTCTACATCAGAGATTCCAGGCCTGGGTAGATAAATGGACCAAGGAGCATGTGCCCCGTGAAATGGCAGCAGAGACCAGCAAGTGGCTC ATGGGTGAGGGGCTGGAGGGCCTGGTGCCCTGTACCACCACCTGTGATACAGAGACCCTGCATTTTGTGAGCATTAACAAGTATCGTGTC AAATACGGCACAGTATTCAAAGCCCCTTAACTGCAAAGCCAGAGCAGATAACTTGGGGTGTGTGTGGGGATGTGTGTGTGGGCCTATGCA CTCACACACTGAAGAAACAAGGAAGATGCCTTTCAAGCCTCACTGGGCCTCTCTGGGACATGGCCACCTGACCTGTGTGTGGCTGGTGCA GCCTGGCACCAAGTGGGCTACCTGTTAGGAACATGAATACCTTACAAAGCTGAAGCTGGAACTTTTCCCAAAGGGTTTTGGGTATAGCCT GCCCTGGAGGGGAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGGCCT AACTTTCAATGAGGGAACCGGATGCTGTTCACACTTTGACTGGATGGAGATGCATTTACAAAACAGACTGGAGAAGGACTTAATACTCAG ATGGATTGGAACTATCATGGTCACTGCTCCTCTCCCCTCCCCACAAAAGGAAAAAAAAGCTGGATTTGATTTTTTTTTTCTGGTCACTCG AGCACATCTAAGATCACCCATTAGGTTTTATCTGGGACCTGCAGTTTGGCTTTGGGATTGATCATCTTGTGGATTTTATTCCTGACGATT CCCTTGCTGCCTACCCTTTTCTCTCCTCTGGTTCTCAACCTCAACGAGTTCAAATCAGTTGTCCTTTTTAGCTCCCGTGGAACTGTTTTG TATCTGCCTCTTTACTAGTCTACCTTAGTGCCATCCACCAGCTTTACTCTCTGACACACACACGCACACACACACACAATTTTAACTTGT |
Top |
FusionGenePPI for EFTUD2_SIN3A |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
EFTUD2 | CD2BP2, RNPS1, SNRNP40, GSTK1, SNRPB, PHLDA3, MYC, RNU11, ARPC3, PRPF8, USP39, MEPCE, RUVBL2, RPAP1, GPN1, RPAP3, AIRE, SRRM1, SRRM2, SNW1, HDAC5, TOP1, PSMA3, GSK3B, SREK1, HDGF, SF3A2, ARRB2, CUL3, CUL5, COPS5, RNU4ATAC, RNU6ATAC, ALYREF, PRPF6, EFTUD2, SNRNP200, HINFP, GRK5, HNRNPR, SF3B1, HNRNPU, SNRPA1, HNRNPC, HNRNPK, SRSF1, DHX9, SF3B3, HNRNPM, CDC5L, SNRPD1, SNRPD3, SFPQ, SF3B6, DDX17, PRKDC, KIAA1429, THOC6, PRPF4B, PRPF19, BCAS2, EEF1A1, SF1, DDX21, USP9X, BASP1, RANGAP1, ZNF622, TPR, UBR4, ESR1, EIF4A3, MAGOH, HSP90AA1, FN1, VCAM1, SF3B4, LSM8, IK, HSPB1, ITGA4, PAN2, CYFIP1, WBP4, PIN1, AARSD1, ACBD3, DUS3L, GTF2E1, GTF2F2, HARS, SARS, TTC1, XPO5, RPUSD2, SH3GLB2, SNF8, RPA3, RPA2, RPA1, ASB1, CDKN1A, HUWE1, MDM2, CUL7, OBSL1, CCDC8, EZH2, SUZ12, EED, RNF2, BMI1, SIRT6, DDX23, TSSC4, AAR2, ZMYND11, RNU5A-1, NTRK1, CDC40, CRNKL1, EEF1A2, EEFSEC, MED12, MED13, MRTO4, PRPF31, RANBP2, SART1, XAB2, PRPF4, RNU12, AHSA1, SNCA, TSNAX, CRY1, CRY2, USP37, U2AF2, TTC27, C9orf78, ZNF746, SNRPE, SNRPF, SNRPG, SNRPN, EAPP, HSF1, SMU1, RIOK1, CYLD, ZNHIT2, ECD, RUVBL1, SLC7A6OS, WDR92, TRIM25, BRCA1, LMNA, MTF1 | SIN3A | MBD3L1, HDAC9, IKZF1, HCFC1, DNMT3B, HDAC1, HDAC2, MTA2, MTA1, ARID4B, SUDS3, SAP30, SAP130, PTMA, EFCAB6, SETDB1, MORF4, PFN2, MORF4L2, RBPJ, SNW1, KDM1A, PML, NCOR1, SKI, SMARCB1, SMARCA4, SMARCA2, SMARCC1, PHB, RBBP4, RBBP7, SAP18, HBP1, MXD1, KLF11, KLF16, KLF13, KLF9, KLF10, ZBTB16, CABIN1, NCOR2, SATB1, PHF12, IKZF3, IKZF2, IKZF4, MBD2, ING1, HEY2, COPS2, BCL6, RLIM, TAL1, RUNX1T1, MNT, MXD3, OGT, MECP2, MBD4, ING2, WHSC1, SFPQ, ZBTB7A, MKX, NR4A2, GPS2, TBL1X, HDAC4, HSP90AA1, NR0B2, ADD1, ESR1, HDAC5, SAP30L, ID2, MGEA5, SAP25, NKX3-2, PRMT5, SMARCE1, MEN1, PA2G4, SMARCA5, NFX1, CBFA2T2, BCL6B, TAF1, CHD3, SMARCC2, ALL1, TAF6, TBP, MBD3, TAF9, RAN, TFCP2, CYP4V2, NKX2-2, TGIF1, ZBTB4, PFDN5, SPI1, KLF1, SP1, ETV6, SMAD3, ARID4A, SYT1, CTCF, TP53, REST, SKIL, CHD4, MYB, TRIM28, SMN1, RUNX1, CSNK2A1, TOPORS, E2F4, MAF, TADA2A, IRF5, MORF4L1, THAP11, KMT2A, NONO, SMARCAD1, SOX2, DACH1, KDM2B, HINT1, LAMTOR5, NR2C1, ISG15, BRMS1L, GRK5, AR, TAB2, SNCA, SLC9A3R2, S100A10, SEPT11, PDLIM5, ACO2, TOM1L2, SEC22B, NOTCH2, THADA, TTLL12, AHCYL1, SF1, IGBP1, EPAS1, BRMS1, BHLHE40, STAT3, MAD1L1, SHFM1, HIF1A, DDB1, CUL4B, CHFR, NXF1, HIST3H3, LOXL2, EED, EDA, LACC1, MIER2, UNK, NTRK1, GTF2E2, CAB39, CSNK2A2, DDX46, FUBP1, KHSRP, PIR, VAPA, TCF20, SIN3B, SNAI1, MAX, FOXK1, FOXK2, FBXW7, KMT2E, NANOG, POU5F1, GATAD1, FAM60A, ZNF704, PHF23, DDX41, TFAP4, MDK, TRIM25 |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Top |
RelatedDrugs for EFTUD2_SIN3A |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Top |
RelatedDiseases for EFTUD2_SIN3A |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | EFTUD2 | C1864652 | Growth and mental retardation, mandibulofacial dysostosis, microcephaly, and cleft palate | 1 | ORPHANET;UNIPROT |
Tgene | SIN3A | C0013336 | Dwarfism | 1 | CTD_human |
Tgene | SIN3A | C0020255 | Hydrocephalus | 1 | CTD_human |
Tgene | SIN3A | C0025958 | Microcephaly | 1 | CTD_human |
Tgene | SIN3A | C0175754 | Agenesis of corpus callosum | 1 | CTD_human |
Tgene | SIN3A | C0376634 | Craniofacial Abnormalities | 1 | CTD_human |
Tgene | SIN3A | C1510586 | Autism Spectrum Disorders | 1 | CTD_human |
Tgene | SIN3A | C3714756 | Intellectual Disability | 1 | CTD_human;HPO |