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Fusion gene ID: 10800 |
FusionGeneSummary for DYNLT3_U2AF2 |
Fusion gene summary |
Fusion gene information | Fusion gene name: DYNLT3_U2AF2 | Fusion gene ID: 10800 | Hgene | Tgene | Gene symbol | DYNLT3 | U2AF2 | Gene ID | 6990 | 11338 |
Gene name | dynein light chain Tctex-type 3 | U2 small nuclear RNA auxiliary factor 2 | |
Synonyms | RP3|TCTE1L|TCTEX1L | U2AF65 | |
Cytomap | Xp11.4 | 19q13.42 | |
Type of gene | protein-coding | protein-coding | |
Description | dynein light chain Tctex-type 3protein 91/23 | splicing factor U2AF 65 kDa subunitU2 (RNU2) small nuclear RNA auxiliary factor 2U2 auxiliary factor 65 kDa subunitU2 small nuclear ribonucleoprotein auxiliary factor (65kD)U2 snRNP auxiliary factor large subunithU2AF65 | |
Modification date | 20180519 | 20180523 | |
UniProtAcc | P51808 | P26368 | |
Ensembl transtripts involved in fusion gene | ENST00000378581, ENST00000378578, ENST00000432389, | ENST00000450554, ENST00000308924, ENST00000590551, | |
Fusion gene scores | * DoF score | 1 X 1 X 1=1 | 5 X 6 X 3=90 |
# samples | 1 | 7 | |
** MAII score | log2(1/1*10)=3.32192809488736 | log2(7/90*10)=-0.362570079384708 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: DYNLT3 [Title/Abstract] AND U2AF2 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Tgene | U2AF2 | GO:0000398 | mRNA splicing, via spliceosome | 1824937 |
Tgene | U2AF2 | GO:0031397 | negative regulation of protein ubiquitination | 24389012 |
Tgene | U2AF2 | GO:0033120 | positive regulation of RNA splicing | 21536736 |
Tgene | U2AF2 | GO:0048025 | negative regulation of mRNA splicing, via spliceosome | 15009664 |
Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | RV | LUAD | TCGA-55-8094-01A | DYNLT3 | chrX | 37700281 | - | U2AF2 | chr19 | 56179873 | + |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000378581 | ENST00000450554 | DYNLT3 | chrX | 37700281 | - | U2AF2 | chr19 | 56179873 | + |
In-frame | ENST00000378581 | ENST00000308924 | DYNLT3 | chrX | 37700281 | - | U2AF2 | chr19 | 56179873 | + |
In-frame | ENST00000378581 | ENST00000590551 | DYNLT3 | chrX | 37700281 | - | U2AF2 | chr19 | 56179873 | + |
In-frame | ENST00000378578 | ENST00000450554 | DYNLT3 | chrX | 37700281 | - | U2AF2 | chr19 | 56179873 | + |
In-frame | ENST00000378578 | ENST00000308924 | DYNLT3 | chrX | 37700281 | - | U2AF2 | chr19 | 56179873 | + |
In-frame | ENST00000378578 | ENST00000590551 | DYNLT3 | chrX | 37700281 | - | U2AF2 | chr19 | 56179873 | + |
In-frame | ENST00000432389 | ENST00000450554 | DYNLT3 | chrX | 37700281 | - | U2AF2 | chr19 | 56179873 | + |
In-frame | ENST00000432389 | ENST00000308924 | DYNLT3 | chrX | 37700281 | - | U2AF2 | chr19 | 56179873 | + |
In-frame | ENST00000432389 | ENST00000590551 | DYNLT3 | chrX | 37700281 | - | U2AF2 | chr19 | 56179873 | + |
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FusionProtFeatures for DYNLT3_U2AF2 |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
DYNLT3 | U2AF2 |
Acts as one of several non-catalytic accessorycomponents of the cytoplasmic dynein 1 complex that are thought tobe involved in linking dynein to cargos and to adapter proteinsthat regulate dynein function. Cytoplasmic dynein 1 acts as amotor for the intracellular retrograde motility of vesicles andorganelles along microtubules. Probably binds BUB3 as part oftransport cargo. Required for the efficient progression throughmitosis (By similarity). {ECO:0000250}. | Plays a role in pre-mRNA splicing and 3'-end processing(PubMed:17024186). By recruiting PRPF19 and the PRP19C/Prp19complex/NTC/Nineteen complex to the RNA polymerase II C-terminaldomain (CTD), and thereby pre-mRNA, may couple transcription tosplicing (PubMed:21536736). Induces cardiac troponin-T (TNNT2)pre-mRNA exon inclusion in muscle. Regulates the TNNT2 exon 5inclusion through competition with MBNL1. Binds preferentially toa single-stranded structure within the polypyrimidine tract ofTNNT2 intron 4 during spliceosome assembly. Required for theexport of mRNA out of the nucleus, even if the mRNA is encoded byan intron-less gene. Represses the splicing of MAPT/Tau exon 10.Positively regulates pre-mRNA 3'-end processing by recruiting theCFIm complex to cleavage and polyadenylation signals(PubMed:17024186). {ECO:0000269|PubMed:15009664,ECO:0000269|PubMed:17024186, ECO:0000269|PubMed:19470458,ECO:0000269|PubMed:19574390, ECO:0000269|PubMed:21536736}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | >U2AF2 | chrX:37700281 | chr19:56179873 | ENST00000308924 | + | 6 | 12 | 259_337 | 247 | 476 | Domain | RRM 2 |
Tgene | >U2AF2 | chrX:37700281 | chr19:56179873 | ENST00000308924 | + | 6 | 12 | 385_466 | 247 | 476 | Domain | RRM 3 |
Tgene | >U2AF2 | chrX:37700281 | chr19:56179873 | ENST00000450554 | + | 6 | 12 | 259_337 | 247 | 472 | Domain | RRM 2 |
Tgene | >U2AF2 | chrX:37700281 | chr19:56179873 | ENST00000450554 | + | 6 | 12 | 385_466 | 247 | 472 | Domain | RRM 3 |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | U2AF2 | chrX:37700281 | chr19:56179873 | ENST00000308924 | + | 6 | 12 | 27_62 | 247 | 476 | Compositional bias | Note=Arg/Ser-rich (RS domain) |
Tgene | U2AF2 | chrX:37700281 | chr19:56179873 | ENST00000450554 | + | 6 | 12 | 27_62 | 247 | 472 | Compositional bias | Note=Arg/Ser-rich (RS domain) |
Tgene | U2AF2 | chrX:37700281 | chr19:56179873 | ENST00000308924 | + | 6 | 12 | 149_231 | 247 | 476 | Domain | RRM 1 |
Tgene | U2AF2 | chrX:37700281 | chr19:56179873 | ENST00000450554 | + | 6 | 12 | 149_231 | 247 | 472 | Domain | RRM 1 |
Tgene | U2AF2 | chrX:37700281 | chr19:56179873 | ENST00000308924 | + | 6 | 12 | 17_47 | 247 | 476 | Region | Necessary and sufficient to stimulate pre-mRNAs 3'-end cleavage in a CFIm complex-dependent manner |
Tgene | U2AF2 | chrX:37700281 | chr19:56179873 | ENST00000450554 | + | 6 | 12 | 17_47 | 247 | 472 | Region | Necessary and sufficient to stimulate pre-mRNAs 3'-end cleavage in a CFIm complex-dependent manner |
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FusionGeneSequence for DYNLT3_U2AF2 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_DYNLT3_ENST00000378581_chrX_37700281_-_U2AF2_ENST00000450554_chr19_56179873_+_316aa MEEYHRHCDEVGFNAEEAHNIVKECVDGVLGGEDYNHNNINQWTASIVEQSLTHLVKLGKAYKYIVTCAVVQKSAYGFHTASSCFWDTTS DGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRAS VGAKNATLSTINQTPVTLQVPGLMSSQVQMGGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCG >In-frame_DYNLT3_ENST00000378581_chrX_37700281_-_U2AF2_ENST00000308924_chr19_56179873_+_320aa MEEYHRHCDEVGFNAEEAHNIVKECVDGVLGGEDYNHNNINQWTASIVEQSLTHLVKLGKAYKYIVTCAVVQKSAYGFHTASSCFWDTTS DGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRAS VGAKNATLVSPPSTINQTPVTLQVPGLMSSQVQMGGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEV >In-frame_DYNLT3_ENST00000378581_chrX_37700281_-_U2AF2_ENST00000590551_chr19_56179873_+_316aa MEEYHRHCDEVGFNAEEAHNIVKECVDGVLGGEDYNHNNINQWTASIVEQSLTHLVKLGKAYKYIVTCAVVQKSAYGFHTASSCFWDTTS DGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRAS VGAKNATLSTINQTPVTLQVPGLMSSQVQMGGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCG >In-frame_DYNLT3_ENST00000378578_chrX_37700281_-_U2AF2_ENST00000450554_chr19_56179873_+_316aa MEEYHRHCDEVGFNAEEAHNIVKECVDGVLGGEDYNHNNINQWTASIVEQSLTHLVKLGKAYKYIVTCAVVQKSAYGFHTASSCFWDTTS DGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRAS VGAKNATLSTINQTPVTLQVPGLMSSQVQMGGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCG >In-frame_DYNLT3_ENST00000378578_chrX_37700281_-_U2AF2_ENST00000308924_chr19_56179873_+_320aa MEEYHRHCDEVGFNAEEAHNIVKECVDGVLGGEDYNHNNINQWTASIVEQSLTHLVKLGKAYKYIVTCAVVQKSAYGFHTASSCFWDTTS DGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRAS VGAKNATLVSPPSTINQTPVTLQVPGLMSSQVQMGGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEV >In-frame_DYNLT3_ENST00000378578_chrX_37700281_-_U2AF2_ENST00000590551_chr19_56179873_+_316aa MEEYHRHCDEVGFNAEEAHNIVKECVDGVLGGEDYNHNNINQWTASIVEQSLTHLVKLGKAYKYIVTCAVVQKSAYGFHTASSCFWDTTS DGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRAS VGAKNATLSTINQTPVTLQVPGLMSSQVQMGGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCG >In-frame_DYNLT3_ENST00000432389_chrX_37700281_-_U2AF2_ENST00000450554_chr19_56179873_+_322aa MARSLGVLVALPFPLPVGFNAEEAHNIVKECVDGVLGGEDYNHNNINQWTASIVEQSLTHLVKLGKAYKYIVTCAVVQKSAYGFHTASSC FWDTTSDGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKL LVQRASVGAKNATLSTINQTPVTLQVPGLMSSQVQMGGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGV >In-frame_DYNLT3_ENST00000432389_chrX_37700281_-_U2AF2_ENST00000308924_chr19_56179873_+_326aa MARSLGVLVALPFPLPVGFNAEEAHNIVKECVDGVLGGEDYNHNNINQWTASIVEQSLTHLVKLGKAYKYIVTCAVVQKSAYGFHTASSC FWDTTSDGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKL LVQRASVGAKNATLVSPPSTINQTPVTLQVPGLMSSQVQMGGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRP >In-frame_DYNLT3_ENST00000432389_chrX_37700281_-_U2AF2_ENST00000590551_chr19_56179873_+_322aa MARSLGVLVALPFPLPVGFNAEEAHNIVKECVDGVLGGEDYNHNNINQWTASIVEQSLTHLVKLGKAYKYIVTCAVVQKSAYGFHTASSC FWDTTSDGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKL LVQRASVGAKNATLSTINQTPVTLQVPGLMSSQVQMGGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGV |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_DYNLT3_ENST00000378581_chrX_37700281_-_U2AF2_ENST00000450554_chr19_56179873_+_948nt ATGGAGGAGTACCATCGCCACTGCGACGAGGTTGGCTTCAATGCTGAGGAAGCCCACAATATTGTCAAAGAGTGTGTAGATGGGGTTTTA GGTGGTGAAGATTATAATCACAACAACATCAACCAGTGGACTGCAAGCATAGTGGAACAATCCTTAACACACCTGGTTAAGTTGGGAAAA GCCTATAAATATATTGTGACCTGTGCAGTGGTCCAGAAGAGCGCATATGGCTTTCACACAGCCAGCTCCTGTTTTTGGGATACCACATCT GATGGGGTTGTGTCCACTGTGGTCCCCGACTCTGCCCACAAGCTGTTCATCGGGGGCTTACCCAACTACCTGAACGATGACCAGGTCAAA GAGCTGCTGACATCCTTTGGGCCCCTCAAGGCCTTCAACCTGGTCAAGGACAGTGCCACGGGGCTCTCCAAGGGCTACGCCTTCTGTGAG TACGTGGACATCAACGTCACGGATCAGGCCATTGCGGGGCTGAACGGCATGCAGCTGGGGGATAAGAAGCTGCTGGTCCAGAGGGCGAGT GTGGGAGCCAAGAATGCCACGCTGAGCACCATCAATCAGACGCCTGTGACCCTGCAAGTGCCGGGCTTGATGAGCTCCCAGGTGCAGATG GGCGGCCACCCGACTGAGGTCCTGTGCCTCATGAACATGGTGCTGCCTGAGGAGCTGCTGGACGACGAGGAGTATGAGGAGATCGTGGAG GACGTGCGGGACGAGTGCAGCAAGTACGGGCTTGTCAAGTCCATCGAGATCCCCCGGCCTGTGGACGGCGTCGAGGTGCCCGGCTGCGGA AAGATCTTTGTGGAGTTCACCTCTGTGTTTGACTGCCAGAAAGCCATGCAGGGCCTGACGGGCCGCAAGTTCGCCAACAGAGTGGTTGTC >In-frame_DYNLT3_ENST00000378581_chrX_37700281_-_U2AF2_ENST00000308924_chr19_56179873_+_960nt ATGGAGGAGTACCATCGCCACTGCGACGAGGTTGGCTTCAATGCTGAGGAAGCCCACAATATTGTCAAAGAGTGTGTAGATGGGGTTTTA GGTGGTGAAGATTATAATCACAACAACATCAACCAGTGGACTGCAAGCATAGTGGAACAATCCTTAACACACCTGGTTAAGTTGGGAAAA GCCTATAAATATATTGTGACCTGTGCAGTGGTCCAGAAGAGCGCATATGGCTTTCACACAGCCAGCTCCTGTTTTTGGGATACCACATCT GATGGGGTTGTGTCCACTGTGGTCCCCGACTCTGCCCACAAGCTGTTCATCGGGGGCTTACCCAACTACCTGAACGATGACCAGGTCAAA GAGCTGCTGACATCCTTTGGGCCCCTCAAGGCCTTCAACCTGGTCAAGGACAGTGCCACGGGGCTCTCCAAGGGCTACGCCTTCTGTGAG TACGTGGACATCAACGTCACGGATCAGGCCATTGCGGGGCTGAACGGCATGCAGCTGGGGGATAAGAAGCTGCTGGTCCAGAGGGCGAGT GTGGGAGCCAAGAATGCCACGCTGGTGAGCCCCCCGAGCACCATCAATCAGACGCCTGTGACCCTGCAAGTGCCGGGCTTGATGAGCTCC CAGGTGCAGATGGGCGGCCACCCGACTGAGGTCCTGTGCCTCATGAACATGGTGCTGCCTGAGGAGCTGCTGGACGACGAGGAGTATGAG GAGATCGTGGAGGACGTGCGGGACGAGTGCAGCAAGTACGGGCTTGTCAAGTCCATCGAGATCCCCCGGCCTGTGGACGGCGTCGAGGTG CCCGGCTGCGGAAAGATCTTTGTGGAGTTCACCTCTGTGTTTGACTGCCAGAAAGCCATGCAGGGCCTGACGGGCCGCAAGTTCGCCAAC >In-frame_DYNLT3_ENST00000378581_chrX_37700281_-_U2AF2_ENST00000590551_chr19_56179873_+_948nt ATGGAGGAGTACCATCGCCACTGCGACGAGGTTGGCTTCAATGCTGAGGAAGCCCACAATATTGTCAAAGAGTGTGTAGATGGGGTTTTA GGTGGTGAAGATTATAATCACAACAACATCAACCAGTGGACTGCAAGCATAGTGGAACAATCCTTAACACACCTGGTTAAGTTGGGAAAA GCCTATAAATATATTGTGACCTGTGCAGTGGTCCAGAAGAGCGCATATGGCTTTCACACAGCCAGCTCCTGTTTTTGGGATACCACATCT GATGGGGTTGTGTCCACTGTGGTCCCCGACTCTGCCCACAAGCTGTTCATCGGGGGCTTACCCAACTACCTGAACGATGACCAGGTCAAA GAGCTGCTGACATCCTTTGGGCCCCTCAAGGCCTTCAACCTGGTCAAGGACAGTGCCACGGGGCTCTCCAAGGGCTACGCCTTCTGTGAG TACGTGGACATCAACGTCACGGATCAGGCCATTGCGGGGCTGAACGGCATGCAGCTGGGGGATAAGAAGCTGCTGGTCCAGAGGGCGAGT GTGGGAGCCAAGAATGCCACGCTGAGCACCATCAATCAGACGCCTGTGACCCTGCAAGTGCCGGGCTTGATGAGCTCCCAGGTGCAGATG GGCGGCCACCCGACTGAGGTCCTGTGCCTCATGAACATGGTGCTGCCTGAGGAGCTGCTGGACGACGAGGAGTATGAGGAGATCGTGGAG GACGTGCGGGACGAGTGCAGCAAGTACGGGCTTGTCAAGTCCATCGAGATCCCCCGGCCTGTGGACGGCGTCGAGGTGCCCGGCTGCGGA AAGATCTTTGTGGAGTTCACCTCTGTGTTTGACTGCCAGAAAGCCATGCAGGGCCTGACGGGCCGCAAGTTCGCCAACAGAGTGGTTGTC >In-frame_DYNLT3_ENST00000378578_chrX_37700281_-_U2AF2_ENST00000450554_chr19_56179873_+_948nt ATGGAGGAGTACCATCGCCACTGCGACGAGGTTGGCTTCAATGCTGAGGAAGCCCACAATATTGTCAAAGAGTGTGTAGATGGGGTTTTA GGTGGTGAAGATTATAATCACAACAACATCAACCAGTGGACTGCAAGCATAGTGGAACAATCCTTAACACACCTGGTTAAGTTGGGAAAA GCCTATAAATATATTGTGACCTGTGCAGTGGTCCAGAAGAGCGCATATGGCTTTCACACAGCCAGCTCCTGTTTTTGGGATACCACATCT GATGGGGTTGTGTCCACTGTGGTCCCCGACTCTGCCCACAAGCTGTTCATCGGGGGCTTACCCAACTACCTGAACGATGACCAGGTCAAA GAGCTGCTGACATCCTTTGGGCCCCTCAAGGCCTTCAACCTGGTCAAGGACAGTGCCACGGGGCTCTCCAAGGGCTACGCCTTCTGTGAG TACGTGGACATCAACGTCACGGATCAGGCCATTGCGGGGCTGAACGGCATGCAGCTGGGGGATAAGAAGCTGCTGGTCCAGAGGGCGAGT GTGGGAGCCAAGAATGCCACGCTGAGCACCATCAATCAGACGCCTGTGACCCTGCAAGTGCCGGGCTTGATGAGCTCCCAGGTGCAGATG GGCGGCCACCCGACTGAGGTCCTGTGCCTCATGAACATGGTGCTGCCTGAGGAGCTGCTGGACGACGAGGAGTATGAGGAGATCGTGGAG GACGTGCGGGACGAGTGCAGCAAGTACGGGCTTGTCAAGTCCATCGAGATCCCCCGGCCTGTGGACGGCGTCGAGGTGCCCGGCTGCGGA AAGATCTTTGTGGAGTTCACCTCTGTGTTTGACTGCCAGAAAGCCATGCAGGGCCTGACGGGCCGCAAGTTCGCCAACAGAGTGGTTGTC >In-frame_DYNLT3_ENST00000378578_chrX_37700281_-_U2AF2_ENST00000308924_chr19_56179873_+_960nt ATGGAGGAGTACCATCGCCACTGCGACGAGGTTGGCTTCAATGCTGAGGAAGCCCACAATATTGTCAAAGAGTGTGTAGATGGGGTTTTA GGTGGTGAAGATTATAATCACAACAACATCAACCAGTGGACTGCAAGCATAGTGGAACAATCCTTAACACACCTGGTTAAGTTGGGAAAA GCCTATAAATATATTGTGACCTGTGCAGTGGTCCAGAAGAGCGCATATGGCTTTCACACAGCCAGCTCCTGTTTTTGGGATACCACATCT GATGGGGTTGTGTCCACTGTGGTCCCCGACTCTGCCCACAAGCTGTTCATCGGGGGCTTACCCAACTACCTGAACGATGACCAGGTCAAA GAGCTGCTGACATCCTTTGGGCCCCTCAAGGCCTTCAACCTGGTCAAGGACAGTGCCACGGGGCTCTCCAAGGGCTACGCCTTCTGTGAG TACGTGGACATCAACGTCACGGATCAGGCCATTGCGGGGCTGAACGGCATGCAGCTGGGGGATAAGAAGCTGCTGGTCCAGAGGGCGAGT GTGGGAGCCAAGAATGCCACGCTGGTGAGCCCCCCGAGCACCATCAATCAGACGCCTGTGACCCTGCAAGTGCCGGGCTTGATGAGCTCC CAGGTGCAGATGGGCGGCCACCCGACTGAGGTCCTGTGCCTCATGAACATGGTGCTGCCTGAGGAGCTGCTGGACGACGAGGAGTATGAG GAGATCGTGGAGGACGTGCGGGACGAGTGCAGCAAGTACGGGCTTGTCAAGTCCATCGAGATCCCCCGGCCTGTGGACGGCGTCGAGGTG CCCGGCTGCGGAAAGATCTTTGTGGAGTTCACCTCTGTGTTTGACTGCCAGAAAGCCATGCAGGGCCTGACGGGCCGCAAGTTCGCCAAC >In-frame_DYNLT3_ENST00000378578_chrX_37700281_-_U2AF2_ENST00000590551_chr19_56179873_+_948nt ATGGAGGAGTACCATCGCCACTGCGACGAGGTTGGCTTCAATGCTGAGGAAGCCCACAATATTGTCAAAGAGTGTGTAGATGGGGTTTTA GGTGGTGAAGATTATAATCACAACAACATCAACCAGTGGACTGCAAGCATAGTGGAACAATCCTTAACACACCTGGTTAAGTTGGGAAAA GCCTATAAATATATTGTGACCTGTGCAGTGGTCCAGAAGAGCGCATATGGCTTTCACACAGCCAGCTCCTGTTTTTGGGATACCACATCT GATGGGGTTGTGTCCACTGTGGTCCCCGACTCTGCCCACAAGCTGTTCATCGGGGGCTTACCCAACTACCTGAACGATGACCAGGTCAAA GAGCTGCTGACATCCTTTGGGCCCCTCAAGGCCTTCAACCTGGTCAAGGACAGTGCCACGGGGCTCTCCAAGGGCTACGCCTTCTGTGAG TACGTGGACATCAACGTCACGGATCAGGCCATTGCGGGGCTGAACGGCATGCAGCTGGGGGATAAGAAGCTGCTGGTCCAGAGGGCGAGT GTGGGAGCCAAGAATGCCACGCTGAGCACCATCAATCAGACGCCTGTGACCCTGCAAGTGCCGGGCTTGATGAGCTCCCAGGTGCAGATG GGCGGCCACCCGACTGAGGTCCTGTGCCTCATGAACATGGTGCTGCCTGAGGAGCTGCTGGACGACGAGGAGTATGAGGAGATCGTGGAG GACGTGCGGGACGAGTGCAGCAAGTACGGGCTTGTCAAGTCCATCGAGATCCCCCGGCCTGTGGACGGCGTCGAGGTGCCCGGCTGCGGA AAGATCTTTGTGGAGTTCACCTCTGTGTTTGACTGCCAGAAAGCCATGCAGGGCCTGACGGGCCGCAAGTTCGCCAACAGAGTGGTTGTC >In-frame_DYNLT3_ENST00000432389_chrX_37700281_-_U2AF2_ENST00000450554_chr19_56179873_+_966nt ATGGCTCGGAGTCTCGGGGTCCTGGTGGCACTGCCATTCCCGCTCCCGGTTGGCTTCAATGCTGAGGAAGCCCACAATATTGTCAAAGAG TGTGTAGATGGGGTTTTAGGTGGTGAAGATTATAATCACAACAACATCAACCAGTGGACTGCAAGCATAGTGGAACAATCCTTAACACAC CTGGTTAAGTTGGGAAAAGCCTATAAATATATTGTGACCTGTGCAGTGGTCCAGAAGAGCGCATATGGCTTTCACACAGCCAGCTCCTGT TTTTGGGATACCACATCTGATGGGGTTGTGTCCACTGTGGTCCCCGACTCTGCCCACAAGCTGTTCATCGGGGGCTTACCCAACTACCTG AACGATGACCAGGTCAAAGAGCTGCTGACATCCTTTGGGCCCCTCAAGGCCTTCAACCTGGTCAAGGACAGTGCCACGGGGCTCTCCAAG GGCTACGCCTTCTGTGAGTACGTGGACATCAACGTCACGGATCAGGCCATTGCGGGGCTGAACGGCATGCAGCTGGGGGATAAGAAGCTG CTGGTCCAGAGGGCGAGTGTGGGAGCCAAGAATGCCACGCTGAGCACCATCAATCAGACGCCTGTGACCCTGCAAGTGCCGGGCTTGATG AGCTCCCAGGTGCAGATGGGCGGCCACCCGACTGAGGTCCTGTGCCTCATGAACATGGTGCTGCCTGAGGAGCTGCTGGACGACGAGGAG TATGAGGAGATCGTGGAGGACGTGCGGGACGAGTGCAGCAAGTACGGGCTTGTCAAGTCCATCGAGATCCCCCGGCCTGTGGACGGCGTC GAGGTGCCCGGCTGCGGAAAGATCTTTGTGGAGTTCACCTCTGTGTTTGACTGCCAGAAAGCCATGCAGGGCCTGACGGGCCGCAAGTTC >In-frame_DYNLT3_ENST00000432389_chrX_37700281_-_U2AF2_ENST00000308924_chr19_56179873_+_978nt ATGGCTCGGAGTCTCGGGGTCCTGGTGGCACTGCCATTCCCGCTCCCGGTTGGCTTCAATGCTGAGGAAGCCCACAATATTGTCAAAGAG TGTGTAGATGGGGTTTTAGGTGGTGAAGATTATAATCACAACAACATCAACCAGTGGACTGCAAGCATAGTGGAACAATCCTTAACACAC CTGGTTAAGTTGGGAAAAGCCTATAAATATATTGTGACCTGTGCAGTGGTCCAGAAGAGCGCATATGGCTTTCACACAGCCAGCTCCTGT TTTTGGGATACCACATCTGATGGGGTTGTGTCCACTGTGGTCCCCGACTCTGCCCACAAGCTGTTCATCGGGGGCTTACCCAACTACCTG AACGATGACCAGGTCAAAGAGCTGCTGACATCCTTTGGGCCCCTCAAGGCCTTCAACCTGGTCAAGGACAGTGCCACGGGGCTCTCCAAG GGCTACGCCTTCTGTGAGTACGTGGACATCAACGTCACGGATCAGGCCATTGCGGGGCTGAACGGCATGCAGCTGGGGGATAAGAAGCTG CTGGTCCAGAGGGCGAGTGTGGGAGCCAAGAATGCCACGCTGGTGAGCCCCCCGAGCACCATCAATCAGACGCCTGTGACCCTGCAAGTG CCGGGCTTGATGAGCTCCCAGGTGCAGATGGGCGGCCACCCGACTGAGGTCCTGTGCCTCATGAACATGGTGCTGCCTGAGGAGCTGCTG GACGACGAGGAGTATGAGGAGATCGTGGAGGACGTGCGGGACGAGTGCAGCAAGTACGGGCTTGTCAAGTCCATCGAGATCCCCCGGCCT GTGGACGGCGTCGAGGTGCCCGGCTGCGGAAAGATCTTTGTGGAGTTCACCTCTGTGTTTGACTGCCAGAAAGCCATGCAGGGCCTGACG >In-frame_DYNLT3_ENST00000432389_chrX_37700281_-_U2AF2_ENST00000590551_chr19_56179873_+_966nt ATGGCTCGGAGTCTCGGGGTCCTGGTGGCACTGCCATTCCCGCTCCCGGTTGGCTTCAATGCTGAGGAAGCCCACAATATTGTCAAAGAG TGTGTAGATGGGGTTTTAGGTGGTGAAGATTATAATCACAACAACATCAACCAGTGGACTGCAAGCATAGTGGAACAATCCTTAACACAC CTGGTTAAGTTGGGAAAAGCCTATAAATATATTGTGACCTGTGCAGTGGTCCAGAAGAGCGCATATGGCTTTCACACAGCCAGCTCCTGT TTTTGGGATACCACATCTGATGGGGTTGTGTCCACTGTGGTCCCCGACTCTGCCCACAAGCTGTTCATCGGGGGCTTACCCAACTACCTG AACGATGACCAGGTCAAAGAGCTGCTGACATCCTTTGGGCCCCTCAAGGCCTTCAACCTGGTCAAGGACAGTGCCACGGGGCTCTCCAAG GGCTACGCCTTCTGTGAGTACGTGGACATCAACGTCACGGATCAGGCCATTGCGGGGCTGAACGGCATGCAGCTGGGGGATAAGAAGCTG CTGGTCCAGAGGGCGAGTGTGGGAGCCAAGAATGCCACGCTGAGCACCATCAATCAGACGCCTGTGACCCTGCAAGTGCCGGGCTTGATG AGCTCCCAGGTGCAGATGGGCGGCCACCCGACTGAGGTCCTGTGCCTCATGAACATGGTGCTGCCTGAGGAGCTGCTGGACGACGAGGAG TATGAGGAGATCGTGGAGGACGTGCGGGACGAGTGCAGCAAGTACGGGCTTGTCAAGTCCATCGAGATCCCCCGGCCTGTGGACGGCGTC GAGGTGCCCGGCTGCGGAAAGATCTTTGTGGAGTTCACCTCTGTGTTTGACTGCCAGAAAGCCATGCAGGGCCTGACGGGCCGCAAGTTC |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_DYNLT3_ENST00000378581_chrX_37700281_-_U2AF2_ENST00000450554_chr19_56179873_+_1599nt TACCATGGAGGAGTACCATCGCCACTGCGACGAGGTTGGCTTCAATGCTGAGGAAGCCCACAATATTGTCAAAGAGTGTGTAGATGGGGT TTTAGGTGGTGAAGATTATAATCACAACAACATCAACCAGTGGACTGCAAGCATAGTGGAACAATCCTTAACACACCTGGTTAAGTTGGG AAAAGCCTATAAATATATTGTGACCTGTGCAGTGGTCCAGAAGAGCGCATATGGCTTTCACACAGCCAGCTCCTGTTTTTGGGATACCAC ATCTGATGGGGTTGTGTCCACTGTGGTCCCCGACTCTGCCCACAAGCTGTTCATCGGGGGCTTACCCAACTACCTGAACGATGACCAGGT CAAAGAGCTGCTGACATCCTTTGGGCCCCTCAAGGCCTTCAACCTGGTCAAGGACAGTGCCACGGGGCTCTCCAAGGGCTACGCCTTCTG TGAGTACGTGGACATCAACGTCACGGATCAGGCCATTGCGGGGCTGAACGGCATGCAGCTGGGGGATAAGAAGCTGCTGGTCCAGAGGGC GAGTGTGGGAGCCAAGAATGCCACGCTGAGCACCATCAATCAGACGCCTGTGACCCTGCAAGTGCCGGGCTTGATGAGCTCCCAGGTGCA GATGGGCGGCCACCCGACTGAGGTCCTGTGCCTCATGAACATGGTGCTGCCTGAGGAGCTGCTGGACGACGAGGAGTATGAGGAGATCGT GGAGGACGTGCGGGACGAGTGCAGCAAGTACGGGCTTGTCAAGTCCATCGAGATCCCCCGGCCTGTGGACGGCGTCGAGGTGCCCGGCTG CGGAAAGATCTTTGTGGAGTTCACCTCTGTGTTTGACTGCCAGAAAGCCATGCAGGGCCTGACGGGCCGCAAGTTCGCCAACAGAGTGGT TGTCACAAAATACTGTGACCCCGACTCTTATCACCGCCGGGACTTCTGGTAGAGGCGGCTGGGGGAGGGTGGGGGCAGGGCTGGCTGGGG GCTTCTCCCCACTCCCGCCCCCCCCTTATCCCCCTCTGAAGACGATGGGCAGAGGAGTGACAGCCGCAGACACACGACAGCCGGCAGCAA CTGGAATGGCAGCAATTAAGGGTGGGGGGCGGGGGTTGGGGGGTTGGGGGGTTAGGGCAGGGAGGGGACTGGGGAAGTGCGCACACAGCC CACACAGACAACACGCACCCACACAGACACAGAGGGAAGGGGTTGGGATGGGGACAGGGTGCACAGCAGGGCGGGGTAGGACCCCAGCCC CTCCCAAAACAGCCTCTCCTTCTCCCATAGACCCCTTTCTTCTCCCCTTCCCCACGGTAGGAACATAGCGTGTTTATATTTTATGGCCAA ACTATTTTGAATTTTGTTGTCCGGCCCTCAGTGCCCTGCCCTCTCCCTTACCAGGACCACAGCTCTGTTCCTTCGGCCTCTGGTCCTCTC TGGTCCCCTCCTGGGTTTCTTACGTAGTTGATTTTTCCTCTTTAGTCTCCCCCGACCTGCGCCCAGCCCCGTGGCCCCTGCCCCTCTCCT >In-frame_DYNLT3_ENST00000378581_chrX_37700281_-_U2AF2_ENST00000308924_chr19_56179873_+_1194nt TACCATGGAGGAGTACCATCGCCACTGCGACGAGGTTGGCTTCAATGCTGAGGAAGCCCACAATATTGTCAAAGAGTGTGTAGATGGGGT TTTAGGTGGTGAAGATTATAATCACAACAACATCAACCAGTGGACTGCAAGCATAGTGGAACAATCCTTAACACACCTGGTTAAGTTGGG AAAAGCCTATAAATATATTGTGACCTGTGCAGTGGTCCAGAAGAGCGCATATGGCTTTCACACAGCCAGCTCCTGTTTTTGGGATACCAC ATCTGATGGGGTTGTGTCCACTGTGGTCCCCGACTCTGCCCACAAGCTGTTCATCGGGGGCTTACCCAACTACCTGAACGATGACCAGGT CAAAGAGCTGCTGACATCCTTTGGGCCCCTCAAGGCCTTCAACCTGGTCAAGGACAGTGCCACGGGGCTCTCCAAGGGCTACGCCTTCTG TGAGTACGTGGACATCAACGTCACGGATCAGGCCATTGCGGGGCTGAACGGCATGCAGCTGGGGGATAAGAAGCTGCTGGTCCAGAGGGC GAGTGTGGGAGCCAAGAATGCCACGCTGGTGAGCCCCCCGAGCACCATCAATCAGACGCCTGTGACCCTGCAAGTGCCGGGCTTGATGAG CTCCCAGGTGCAGATGGGCGGCCACCCGACTGAGGTCCTGTGCCTCATGAACATGGTGCTGCCTGAGGAGCTGCTGGACGACGAGGAGTA TGAGGAGATCGTGGAGGACGTGCGGGACGAGTGCAGCAAGTACGGGCTTGTCAAGTCCATCGAGATCCCCCGGCCTGTGGACGGCGTCGA GGTGCCCGGCTGCGGAAAGATCTTTGTGGAGTTCACCTCTGTGTTTGACTGCCAGAAAGCCATGCAGGGCCTGACGGGCCGCAAGTTCGC CAACAGAGTGGTTGTCACAAAATACTGTGACCCCGACTCTTATCACCGCCGGGACTTCTGGTAGAGGCGGCTGGGGGAGGGTGGGGGCAG GGCTGGCTGGGGGCTTCTCCCCACTCCCGCCCCCCCCTTATCCCCCTCTGAAGACGATGGGCAGAGGAGTGACAGCCGCAGACACACGAC AGCCGGCAGCAACTGGAATGGCAGCAATTAAGGGTGGGGGGCGGGGGTTGGGGGGTTGGGGGGTTAGGGCAGGGAGGGGACTGGGGAAGT >In-frame_DYNLT3_ENST00000378581_chrX_37700281_-_U2AF2_ENST00000590551_chr19_56179873_+_1123nt TACCATGGAGGAGTACCATCGCCACTGCGACGAGGTTGGCTTCAATGCTGAGGAAGCCCACAATATTGTCAAAGAGTGTGTAGATGGGGT TTTAGGTGGTGAAGATTATAATCACAACAACATCAACCAGTGGACTGCAAGCATAGTGGAACAATCCTTAACACACCTGGTTAAGTTGGG AAAAGCCTATAAATATATTGTGACCTGTGCAGTGGTCCAGAAGAGCGCATATGGCTTTCACACAGCCAGCTCCTGTTTTTGGGATACCAC ATCTGATGGGGTTGTGTCCACTGTGGTCCCCGACTCTGCCCACAAGCTGTTCATCGGGGGCTTACCCAACTACCTGAACGATGACCAGGT CAAAGAGCTGCTGACATCCTTTGGGCCCCTCAAGGCCTTCAACCTGGTCAAGGACAGTGCCACGGGGCTCTCCAAGGGCTACGCCTTCTG TGAGTACGTGGACATCAACGTCACGGATCAGGCCATTGCGGGGCTGAACGGCATGCAGCTGGGGGATAAGAAGCTGCTGGTCCAGAGGGC GAGTGTGGGAGCCAAGAATGCCACGCTGAGCACCATCAATCAGACGCCTGTGACCCTGCAAGTGCCGGGCTTGATGAGCTCCCAGGTGCA GATGGGCGGCCACCCGACTGAGGTCCTGTGCCTCATGAACATGGTGCTGCCTGAGGAGCTGCTGGACGACGAGGAGTATGAGGAGATCGT GGAGGACGTGCGGGACGAGTGCAGCAAGTACGGGCTTGTCAAGTCCATCGAGATCCCCCGGCCTGTGGACGGCGTCGAGGTGCCCGGCTG CGGAAAGATCTTTGTGGAGTTCACCTCTGTGTTTGACTGCCAGAAAGCCATGCAGGGCCTGACGGGCCGCAAGTTCGCCAACAGAGTGGT TGTCACAAAATACTGTGACCCCGACTCTTATCACCGCCGGGACTTCTGGTAGAGGCGGCTGGGGGAGGGTGGGGGCAGGGCTGGCTGGGG GCTTCTCCCCACTCCCGCCCCCCCCTTATCCCCCTCTGAAGACGATGGGCAGAGGAGTGACAGCCGCAGACACACGACAGCCGGCAGCAA >In-frame_DYNLT3_ENST00000378578_chrX_37700281_-_U2AF2_ENST00000450554_chr19_56179873_+_1722nt CAAAGGCGGGGATTGCGTAGGGAAAGGCCCTAGGCCATAAACGGGGGTGGGGCCTCCCCGGAGGCCAGTGCGCGGCCGCGGTGCTCTACC GGCGTGTCGCTCCGCCCCAGGGAGAGCCGGCGCTACCATGGAGGAGTACCATCGCCACTGCGACGAGGTTGGCTTCAATGCTGAGGAAGC CCACAATATTGTCAAAGAGTGTGTAGATGGGGTTTTAGGTGGTGAAGATTATAATCACAACAACATCAACCAGTGGACTGCAAGCATAGT GGAACAATCCTTAACACACCTGGTTAAGTTGGGAAAAGCCTATAAATATATTGTGACCTGTGCAGTGGTCCAGAAGAGCGCATATGGCTT TCACACAGCCAGCTCCTGTTTTTGGGATACCACATCTGATGGGGTTGTGTCCACTGTGGTCCCCGACTCTGCCCACAAGCTGTTCATCGG GGGCTTACCCAACTACCTGAACGATGACCAGGTCAAAGAGCTGCTGACATCCTTTGGGCCCCTCAAGGCCTTCAACCTGGTCAAGGACAG TGCCACGGGGCTCTCCAAGGGCTACGCCTTCTGTGAGTACGTGGACATCAACGTCACGGATCAGGCCATTGCGGGGCTGAACGGCATGCA GCTGGGGGATAAGAAGCTGCTGGTCCAGAGGGCGAGTGTGGGAGCCAAGAATGCCACGCTGAGCACCATCAATCAGACGCCTGTGACCCT GCAAGTGCCGGGCTTGATGAGCTCCCAGGTGCAGATGGGCGGCCACCCGACTGAGGTCCTGTGCCTCATGAACATGGTGCTGCCTGAGGA GCTGCTGGACGACGAGGAGTATGAGGAGATCGTGGAGGACGTGCGGGACGAGTGCAGCAAGTACGGGCTTGTCAAGTCCATCGAGATCCC CCGGCCTGTGGACGGCGTCGAGGTGCCCGGCTGCGGAAAGATCTTTGTGGAGTTCACCTCTGTGTTTGACTGCCAGAAAGCCATGCAGGG CCTGACGGGCCGCAAGTTCGCCAACAGAGTGGTTGTCACAAAATACTGTGACCCCGACTCTTATCACCGCCGGGACTTCTGGTAGAGGCG GCTGGGGGAGGGTGGGGGCAGGGCTGGCTGGGGGCTTCTCCCCACTCCCGCCCCCCCCTTATCCCCCTCTGAAGACGATGGGCAGAGGAG TGACAGCCGCAGACACACGACAGCCGGCAGCAACTGGAATGGCAGCAATTAAGGGTGGGGGGCGGGGGTTGGGGGGTTGGGGGGTTAGGG CAGGGAGGGGACTGGGGAAGTGCGCACACAGCCCACACAGACAACACGCACCCACACAGACACAGAGGGAAGGGGTTGGGATGGGGACAG GGTGCACAGCAGGGCGGGGTAGGACCCCAGCCCCTCCCAAAACAGCCTCTCCTTCTCCCATAGACCCCTTTCTTCTCCCCTTCCCCACGG TAGGAACATAGCGTGTTTATATTTTATGGCCAAACTATTTTGAATTTTGTTGTCCGGCCCTCAGTGCCCTGCCCTCTCCCTTACCAGGAC CACAGCTCTGTTCCTTCGGCCTCTGGTCCTCTCTGGTCCCCTCCTGGGTTTCTTACGTAGTTGATTTTTCCTCTTTAGTCTCCCCCGACC TGCGCCCAGCCCCGTGGCCCCTGCCCCTCTCCTACTCTCTGTGGCAGTTTCATATTTGCTAAGACGAATTTGCTCATTAAACATTTTGTT >In-frame_DYNLT3_ENST00000378578_chrX_37700281_-_U2AF2_ENST00000308924_chr19_56179873_+_1317nt CAAAGGCGGGGATTGCGTAGGGAAAGGCCCTAGGCCATAAACGGGGGTGGGGCCTCCCCGGAGGCCAGTGCGCGGCCGCGGTGCTCTACC GGCGTGTCGCTCCGCCCCAGGGAGAGCCGGCGCTACCATGGAGGAGTACCATCGCCACTGCGACGAGGTTGGCTTCAATGCTGAGGAAGC CCACAATATTGTCAAAGAGTGTGTAGATGGGGTTTTAGGTGGTGAAGATTATAATCACAACAACATCAACCAGTGGACTGCAAGCATAGT GGAACAATCCTTAACACACCTGGTTAAGTTGGGAAAAGCCTATAAATATATTGTGACCTGTGCAGTGGTCCAGAAGAGCGCATATGGCTT TCACACAGCCAGCTCCTGTTTTTGGGATACCACATCTGATGGGGTTGTGTCCACTGTGGTCCCCGACTCTGCCCACAAGCTGTTCATCGG GGGCTTACCCAACTACCTGAACGATGACCAGGTCAAAGAGCTGCTGACATCCTTTGGGCCCCTCAAGGCCTTCAACCTGGTCAAGGACAG TGCCACGGGGCTCTCCAAGGGCTACGCCTTCTGTGAGTACGTGGACATCAACGTCACGGATCAGGCCATTGCGGGGCTGAACGGCATGCA GCTGGGGGATAAGAAGCTGCTGGTCCAGAGGGCGAGTGTGGGAGCCAAGAATGCCACGCTGGTGAGCCCCCCGAGCACCATCAATCAGAC GCCTGTGACCCTGCAAGTGCCGGGCTTGATGAGCTCCCAGGTGCAGATGGGCGGCCACCCGACTGAGGTCCTGTGCCTCATGAACATGGT GCTGCCTGAGGAGCTGCTGGACGACGAGGAGTATGAGGAGATCGTGGAGGACGTGCGGGACGAGTGCAGCAAGTACGGGCTTGTCAAGTC CATCGAGATCCCCCGGCCTGTGGACGGCGTCGAGGTGCCCGGCTGCGGAAAGATCTTTGTGGAGTTCACCTCTGTGTTTGACTGCCAGAA AGCCATGCAGGGCCTGACGGGCCGCAAGTTCGCCAACAGAGTGGTTGTCACAAAATACTGTGACCCCGACTCTTATCACCGCCGGGACTT CTGGTAGAGGCGGCTGGGGGAGGGTGGGGGCAGGGCTGGCTGGGGGCTTCTCCCCACTCCCGCCCCCCCCTTATCCCCCTCTGAAGACGA TGGGCAGAGGAGTGACAGCCGCAGACACACGACAGCCGGCAGCAACTGGAATGGCAGCAATTAAGGGTGGGGGGCGGGGGTTGGGGGGTT >In-frame_DYNLT3_ENST00000378578_chrX_37700281_-_U2AF2_ENST00000590551_chr19_56179873_+_1246nt CAAAGGCGGGGATTGCGTAGGGAAAGGCCCTAGGCCATAAACGGGGGTGGGGCCTCCCCGGAGGCCAGTGCGCGGCCGCGGTGCTCTACC GGCGTGTCGCTCCGCCCCAGGGAGAGCCGGCGCTACCATGGAGGAGTACCATCGCCACTGCGACGAGGTTGGCTTCAATGCTGAGGAAGC CCACAATATTGTCAAAGAGTGTGTAGATGGGGTTTTAGGTGGTGAAGATTATAATCACAACAACATCAACCAGTGGACTGCAAGCATAGT GGAACAATCCTTAACACACCTGGTTAAGTTGGGAAAAGCCTATAAATATATTGTGACCTGTGCAGTGGTCCAGAAGAGCGCATATGGCTT TCACACAGCCAGCTCCTGTTTTTGGGATACCACATCTGATGGGGTTGTGTCCACTGTGGTCCCCGACTCTGCCCACAAGCTGTTCATCGG GGGCTTACCCAACTACCTGAACGATGACCAGGTCAAAGAGCTGCTGACATCCTTTGGGCCCCTCAAGGCCTTCAACCTGGTCAAGGACAG TGCCACGGGGCTCTCCAAGGGCTACGCCTTCTGTGAGTACGTGGACATCAACGTCACGGATCAGGCCATTGCGGGGCTGAACGGCATGCA GCTGGGGGATAAGAAGCTGCTGGTCCAGAGGGCGAGTGTGGGAGCCAAGAATGCCACGCTGAGCACCATCAATCAGACGCCTGTGACCCT GCAAGTGCCGGGCTTGATGAGCTCCCAGGTGCAGATGGGCGGCCACCCGACTGAGGTCCTGTGCCTCATGAACATGGTGCTGCCTGAGGA GCTGCTGGACGACGAGGAGTATGAGGAGATCGTGGAGGACGTGCGGGACGAGTGCAGCAAGTACGGGCTTGTCAAGTCCATCGAGATCCC CCGGCCTGTGGACGGCGTCGAGGTGCCCGGCTGCGGAAAGATCTTTGTGGAGTTCACCTCTGTGTTTGACTGCCAGAAAGCCATGCAGGG CCTGACGGGCCGCAAGTTCGCCAACAGAGTGGTTGTCACAAAATACTGTGACCCCGACTCTTATCACCGCCGGGACTTCTGGTAGAGGCG GCTGGGGGAGGGTGGGGGCAGGGCTGGCTGGGGGCTTCTCCCCACTCCCGCCCCCCCCTTATCCCCCTCTGAAGACGATGGGCAGAGGAG >In-frame_DYNLT3_ENST00000432389_chrX_37700281_-_U2AF2_ENST00000450554_chr19_56179873_+_1931nt CTCCCAGCGAGGGCGGTCCCAAGAGTTGGGGTGCGGCGTCCTCCGAGCCCGGGTCCTCTCCCCTGGGCCCGGGATCCGCCCCGCCCGACC CGTTCTCCCCACCCCAAAGTCCTGAGATTCGGGGTGGGAGGGGTGGCCAGGAGCGCGCGGATCAGACGGTGGGGTCGGGGCAGGGTTGGG AGGACGAGGCCTGACTTGGGTGCGAGGAGTGGGCATGGGGTGACGGGCGCCGCCCTCCTACCGGGCGGGCCTCGAAAACGGGTCTTCCCG CTGCTGCCTCCGTCCCTTGGCTTCCTCAGCGCGGGTGCTGCAGCCCCCATGGCTCGGAGTCTCGGGGTCCTGGTGGCACTGCCATTCCCG CTCCCGGTTGGCTTCAATGCTGAGGAAGCCCACAATATTGTCAAAGAGTGTGTAGATGGGGTTTTAGGTGGTGAAGATTATAATCACAAC AACATCAACCAGTGGACTGCAAGCATAGTGGAACAATCCTTAACACACCTGGTTAAGTTGGGAAAAGCCTATAAATATATTGTGACCTGT GCAGTGGTCCAGAAGAGCGCATATGGCTTTCACACAGCCAGCTCCTGTTTTTGGGATACCACATCTGATGGGGTTGTGTCCACTGTGGTC CCCGACTCTGCCCACAAGCTGTTCATCGGGGGCTTACCCAACTACCTGAACGATGACCAGGTCAAAGAGCTGCTGACATCCTTTGGGCCC CTCAAGGCCTTCAACCTGGTCAAGGACAGTGCCACGGGGCTCTCCAAGGGCTACGCCTTCTGTGAGTACGTGGACATCAACGTCACGGAT CAGGCCATTGCGGGGCTGAACGGCATGCAGCTGGGGGATAAGAAGCTGCTGGTCCAGAGGGCGAGTGTGGGAGCCAAGAATGCCACGCTG AGCACCATCAATCAGACGCCTGTGACCCTGCAAGTGCCGGGCTTGATGAGCTCCCAGGTGCAGATGGGCGGCCACCCGACTGAGGTCCTG TGCCTCATGAACATGGTGCTGCCTGAGGAGCTGCTGGACGACGAGGAGTATGAGGAGATCGTGGAGGACGTGCGGGACGAGTGCAGCAAG TACGGGCTTGTCAAGTCCATCGAGATCCCCCGGCCTGTGGACGGCGTCGAGGTGCCCGGCTGCGGAAAGATCTTTGTGGAGTTCACCTCT GTGTTTGACTGCCAGAAAGCCATGCAGGGCCTGACGGGCCGCAAGTTCGCCAACAGAGTGGTTGTCACAAAATACTGTGACCCCGACTCT TATCACCGCCGGGACTTCTGGTAGAGGCGGCTGGGGGAGGGTGGGGGCAGGGCTGGCTGGGGGCTTCTCCCCACTCCCGCCCCCCCCTTA TCCCCCTCTGAAGACGATGGGCAGAGGAGTGACAGCCGCAGACACACGACAGCCGGCAGCAACTGGAATGGCAGCAATTAAGGGTGGGGG GCGGGGGTTGGGGGGTTGGGGGGTTAGGGCAGGGAGGGGACTGGGGAAGTGCGCACACAGCCCACACAGACAACACGCACCCACACAGAC ACAGAGGGAAGGGGTTGGGATGGGGACAGGGTGCACAGCAGGGCGGGGTAGGACCCCAGCCCCTCCCAAAACAGCCTCTCCTTCTCCCAT AGACCCCTTTCTTCTCCCCTTCCCCACGGTAGGAACATAGCGTGTTTATATTTTATGGCCAAACTATTTTGAATTTTGTTGTCCGGCCCT CAGTGCCCTGCCCTCTCCCTTACCAGGACCACAGCTCTGTTCCTTCGGCCTCTGGTCCTCTCTGGTCCCCTCCTGGGTTTCTTACGTAGT TGATTTTTCCTCTTTAGTCTCCCCCGACCTGCGCCCAGCCCCGTGGCCCCTGCCCCTCTCCTACTCTCTGTGGCAGTTTCATATTTGCTA >In-frame_DYNLT3_ENST00000432389_chrX_37700281_-_U2AF2_ENST00000308924_chr19_56179873_+_1526nt CTCCCAGCGAGGGCGGTCCCAAGAGTTGGGGTGCGGCGTCCTCCGAGCCCGGGTCCTCTCCCCTGGGCCCGGGATCCGCCCCGCCCGACC CGTTCTCCCCACCCCAAAGTCCTGAGATTCGGGGTGGGAGGGGTGGCCAGGAGCGCGCGGATCAGACGGTGGGGTCGGGGCAGGGTTGGG AGGACGAGGCCTGACTTGGGTGCGAGGAGTGGGCATGGGGTGACGGGCGCCGCCCTCCTACCGGGCGGGCCTCGAAAACGGGTCTTCCCG CTGCTGCCTCCGTCCCTTGGCTTCCTCAGCGCGGGTGCTGCAGCCCCCATGGCTCGGAGTCTCGGGGTCCTGGTGGCACTGCCATTCCCG CTCCCGGTTGGCTTCAATGCTGAGGAAGCCCACAATATTGTCAAAGAGTGTGTAGATGGGGTTTTAGGTGGTGAAGATTATAATCACAAC AACATCAACCAGTGGACTGCAAGCATAGTGGAACAATCCTTAACACACCTGGTTAAGTTGGGAAAAGCCTATAAATATATTGTGACCTGT GCAGTGGTCCAGAAGAGCGCATATGGCTTTCACACAGCCAGCTCCTGTTTTTGGGATACCACATCTGATGGGGTTGTGTCCACTGTGGTC CCCGACTCTGCCCACAAGCTGTTCATCGGGGGCTTACCCAACTACCTGAACGATGACCAGGTCAAAGAGCTGCTGACATCCTTTGGGCCC CTCAAGGCCTTCAACCTGGTCAAGGACAGTGCCACGGGGCTCTCCAAGGGCTACGCCTTCTGTGAGTACGTGGACATCAACGTCACGGAT CAGGCCATTGCGGGGCTGAACGGCATGCAGCTGGGGGATAAGAAGCTGCTGGTCCAGAGGGCGAGTGTGGGAGCCAAGAATGCCACGCTG GTGAGCCCCCCGAGCACCATCAATCAGACGCCTGTGACCCTGCAAGTGCCGGGCTTGATGAGCTCCCAGGTGCAGATGGGCGGCCACCCG ACTGAGGTCCTGTGCCTCATGAACATGGTGCTGCCTGAGGAGCTGCTGGACGACGAGGAGTATGAGGAGATCGTGGAGGACGTGCGGGAC GAGTGCAGCAAGTACGGGCTTGTCAAGTCCATCGAGATCCCCCGGCCTGTGGACGGCGTCGAGGTGCCCGGCTGCGGAAAGATCTTTGTG GAGTTCACCTCTGTGTTTGACTGCCAGAAAGCCATGCAGGGCCTGACGGGCCGCAAGTTCGCCAACAGAGTGGTTGTCACAAAATACTGT GACCCCGACTCTTATCACCGCCGGGACTTCTGGTAGAGGCGGCTGGGGGAGGGTGGGGGCAGGGCTGGCTGGGGGCTTCTCCCCACTCCC GCCCCCCCCTTATCCCCCTCTGAAGACGATGGGCAGAGGAGTGACAGCCGCAGACACACGACAGCCGGCAGCAACTGGAATGGCAGCAAT >In-frame_DYNLT3_ENST00000432389_chrX_37700281_-_U2AF2_ENST00000590551_chr19_56179873_+_1455nt CTCCCAGCGAGGGCGGTCCCAAGAGTTGGGGTGCGGCGTCCTCCGAGCCCGGGTCCTCTCCCCTGGGCCCGGGATCCGCCCCGCCCGACC CGTTCTCCCCACCCCAAAGTCCTGAGATTCGGGGTGGGAGGGGTGGCCAGGAGCGCGCGGATCAGACGGTGGGGTCGGGGCAGGGTTGGG AGGACGAGGCCTGACTTGGGTGCGAGGAGTGGGCATGGGGTGACGGGCGCCGCCCTCCTACCGGGCGGGCCTCGAAAACGGGTCTTCCCG CTGCTGCCTCCGTCCCTTGGCTTCCTCAGCGCGGGTGCTGCAGCCCCCATGGCTCGGAGTCTCGGGGTCCTGGTGGCACTGCCATTCCCG CTCCCGGTTGGCTTCAATGCTGAGGAAGCCCACAATATTGTCAAAGAGTGTGTAGATGGGGTTTTAGGTGGTGAAGATTATAATCACAAC AACATCAACCAGTGGACTGCAAGCATAGTGGAACAATCCTTAACACACCTGGTTAAGTTGGGAAAAGCCTATAAATATATTGTGACCTGT GCAGTGGTCCAGAAGAGCGCATATGGCTTTCACACAGCCAGCTCCTGTTTTTGGGATACCACATCTGATGGGGTTGTGTCCACTGTGGTC CCCGACTCTGCCCACAAGCTGTTCATCGGGGGCTTACCCAACTACCTGAACGATGACCAGGTCAAAGAGCTGCTGACATCCTTTGGGCCC CTCAAGGCCTTCAACCTGGTCAAGGACAGTGCCACGGGGCTCTCCAAGGGCTACGCCTTCTGTGAGTACGTGGACATCAACGTCACGGAT CAGGCCATTGCGGGGCTGAACGGCATGCAGCTGGGGGATAAGAAGCTGCTGGTCCAGAGGGCGAGTGTGGGAGCCAAGAATGCCACGCTG AGCACCATCAATCAGACGCCTGTGACCCTGCAAGTGCCGGGCTTGATGAGCTCCCAGGTGCAGATGGGCGGCCACCCGACTGAGGTCCTG TGCCTCATGAACATGGTGCTGCCTGAGGAGCTGCTGGACGACGAGGAGTATGAGGAGATCGTGGAGGACGTGCGGGACGAGTGCAGCAAG TACGGGCTTGTCAAGTCCATCGAGATCCCCCGGCCTGTGGACGGCGTCGAGGTGCCCGGCTGCGGAAAGATCTTTGTGGAGTTCACCTCT GTGTTTGACTGCCAGAAAGCCATGCAGGGCCTGACGGGCCGCAAGTTCGCCAACAGAGTGGTTGTCACAAAATACTGTGACCCCGACTCT TATCACCGCCGGGACTTCTGGTAGAGGCGGCTGGGGGAGGGTGGGGGCAGGGCTGGCTGGGGGCTTCTCCCCACTCCCGCCCCCCCCTTA TCCCCCTCTGAAGACGATGGGCAGAGGAGTGACAGCCGCAGACACACGACAGCCGGCAGCAACTGGAATGGCAGCAATTAAGGGTGGGGG |
Top |
FusionGenePPI for DYNLT3_U2AF2 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
DYNLT3 | DYNC1I2, TESC, DYNLT3, DYNC1I1, DYNC1LI2, DYNC1H1, DYNC1LI1, DCTN3, RPS16, RPS29, RPS3, SERBP1, NIF3L1, EZH2, PAFAH1B1, DYNLT1, TCTEX1D2 | U2AF2 | SRPK2, CHIC2, PUF60, DVL2, LURAP1, BEND7, DPPA2, THAP1, SRSF1, KIAA0907, SF1, U2AF1, TCERG1, RNPS1, SRSF11, SCAF11, SF3A2, WT1, GIGYF2, TERF2, RBM39, NOP56, GLIS2, NONO, SFPQ, SMARCAD1, HDGF, SIRT7, CUL3, CUL5, CUL1, COPS5, CAND1, PRPF19, BCAS2, CDC5L, PLRG1, POLR2A, ALYREF, ATXN1, SMAD2, SMAD3, TOP1, SNRNP200, SNRNP70, SRSF9, HNRNPM, HNRNPU, SRSF2, SF3B3, SF3B6, SF3B1, SNRPD1, SRSF5, PRPF6, SNRPA1, SRSF7, SRSF3, CPSF6, PRPF3, HNRNPF, HNRNPH1, HNRNPC, HNRNPK, HNRNPR, DDX5, TPR, SART1, IK, RPL37A, RPL18A, RPL15, THOC6, RPL18, RPL6, RPS24, DDX3X, HNRNPDL, SAP18, SYNCRIP, ZCCHC8, PRKDC, DYNC1H1, TUBB, TARDBP, RRP7A, SEPT2, RRS1, SLIRP, COX7A2L, SEPT7, PHGDH, S100A9, VDAC2, SAFB, POC1A, ESR1, BARD1, SNRPA, CHERP, CCAR1, RBM10, SUGP1, HNRNPA0, DDX17, SAP30BP, RBM4, HNRNPD, QKI, KHDRBS3, KHDRBS1, RBFOX2, RBM5, SMAD5, IL7R, HLA-DMA, SRPK1, SH3RF2, PRPF40A, APBB1, PIN1, TERF1, AES, DACH1, MDM2, CUL7, OBSL1, EZH2, SUZ12, EED, RNF2, LUC7L, LUC7L2, CHD8, HUWE1, PSPC1, RANGAP1, PPIE, PSMA1, PSMA2, PSMA4, PSMA5, PSMB4, NTRK1, EWSR1, HSP90AA1, LAMB3, CERK, MCM2, SNW1, TRA2B, ACIN1, AHNAK, AK2, ANP32A, ANXA1, ANXA2, ANXA5, ANXA6, APOA1, ARHGDIA, ARHGDIB, ARPC1B, ATIC, DDX39B, CHTOP, CALCOCO2, CALM1, CALR, CANX, CAP1, CAPZB, CCT2, CCT6A, CCT8, CDC37, CDV3, CFL1, CLIC1, CLTC, CNN2, CORO1A, DARS, DDX21, DHX15, DHX9, EEF1A1, EEF1A1P5, EEF1D, EEF2, EFTUD2, EIF3A, EIF4A1, EIF4A3, EIF4H, EIF5A, ELAVL1, EPRS, EVL, EZR, FABP5, FAM107B, ESYT1, FBL, FLOT1, FLOT2, FUBP1, SRSF10, GANAB, GBP1, GBP2, GDI2, GLUD1, GMFG, GNAI2, GNB2L1, GOT2, GPI, H2AFJ, SARNP, HCLS1, HINT1, HK1, HMGB1, HMGB2, HN1L, HNRNPA1, HNRNPA2B1, HNRNPA3, HNRNPAB, HNRNPL, HSP90AB1, HSP90B1, HSPA1A, HSPA5, HSPA8, HSPA9, HSPD1, HSPE1, HSPH1, IFI16, ILF2, ILF3, IMPDH2, IQGAP1, KHSRP, KIAA1429, KIFC1, KPNB1, LAP3, LARP1, LASP1, LCP1, LGALS1, LRRC59, LRRFIP1, LSP1, MAPRE1, MATR3, MDH2, MSN, MTHFD1, MVP, NAMPT, NCBP1, NCL, NCOA5, NPM1, NUMA1, NUSAP1, P4HB, PA2G4, PABPC1, PABPC4, PABPN1, PAICS, PARK7, PCBP1, PCNA, PDAP1, PDIA3, PDIA6, PGK1, PHB, PHB2, PKM, PNN, POLDIP3, PPIA, PPIB, PRDX1, PRDX2, PRPF8, PSMD2, PSME1, PSME2, PTBP1, PTPRC, RAB7A, RAC2, RALY, RAN, RBMX, RHOA, RPN1, RUVBL1, S100A6, SAMHD1, SEPT9, SERBP1, SF3A1, SF3B2, SRSF4, SRSF6, SHMT2, SLC25A5, SLC3A2, SLC9A3R1, SND1, SON, SPTAN1, SRRM1, SRRM2, ST13, STAT1, STIP1, TAGLN2, TALDO1, THRAP3, TKT, TLN1, TMPO, TPI1, TRA2A, TRIM28, TUFM, U2AF2, UBA1, UPF1, VCP, VDAC1, WARS, WDR1, XRCC6, YBX1, YWHAE, YWHAZ, ZC3H13, ZYX, CRBN, EGFR, CLASRP, JMJD6, SRSF12, GPATCH8, SCAF1, CLK3, GPATCH11, C1QBP, CLK2, CASC3, ZC3H18, U2SURP, DKC1, ZRANB2, HIST1H2AG, CHCHD10, BCLAF1, DAP3, RPS3A, ZCCHC3, RPF2, MRPS9, RPL10A, INO80B, UBE2A, LMNA |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for DYNLT3_U2AF2 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for DYNLT3_U2AF2 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |