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Center for Computational Systems Medicine
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Gene summary

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Gene structures and expression levels

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Exon skipping events with PSIs in TCGA

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Exon skipping events with PSIs in GTEx

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Open reading frame (ORF) annotation in the exon skipping event

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Exon skipping events in the canonical protein sequence

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SNVs in the skipped exons with depth of coverage

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Splicing Quantitative Trait Loci (sQTLs) in the skipped exons

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Splicing Quantitative Trait Methylation (sQTM) in the skipped exon

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Related drugs with this gene

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Related diseases with this gene

Gene summary for TRANK1

check button Gene summary
Gene informationGene symbol

TRANK1

Gene ID

9881

Gene nametetratricopeptide repeat and ankyrin repeat containing 1
SynonymsLBA1
Cytomap

3p22.2

Type of geneprotein-coding
DescriptionTPR and ankyrin repeat-containing protein 1lupus brain antigen 1 homolog
Modification date20180519
UniProtAcc

O15050

ContextPubMed: TRANK1 [Title/Abstract] AND exon [Title/Abstract] AND skip [Title/Abstract]
- Title (PMID)

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID

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Exon skipping events across known transcript of Ensembl for TRANK1 from UCSC genome browser

check buttonSkipped exons in TCGA and GTEx based on Ensembl gene isoform structure.
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

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Gene isoform structures and expression levels for TRANK1

check button Expression levels of gene isoforms across TCGA.
gencode gene structure

check button Expression levels of gene isoforms across GTEx.
gencode gene structure


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Exon skipping events with PSIs in TCGA for TRANK1

check button Information of exkip skipping event in TCGA.
Exon skip IDchrExons involved in exon skippingSkipped exonENSGENSTs
exon_skip_382323336872363:36875410:36876252:36876398:36879862:3687999536876252:36876398ENSG00000168016.9ENST00000429976.2,ENST00000428977.2,ENST00000301807.6
exon_skip_382327336876252:36876398:36879862:36879995:36880103:3688020736879862:36879995ENSG00000168016.9ENST00000429976.2,ENST00000428977.2,ENST00000301807.6
exon_skip_382329336880103:36880207:36884112:36884201:36887738:3688789536884112:36884201ENSG00000168016.9ENST00000429976.2,ENST00000428977.2,ENST00000301807.6
exon_skip_382330336887738:36887895:36888690:36888837:36893209:3689334736888690:36888837ENSG00000168016.9ENST00000429976.2,ENST00000428977.2,ENST00000301807.6
exon_skip_382334336893636:36893836:36896663:36899540:36900208:3690037436896663:36899540ENSG00000168016.9ENST00000429976.2,ENST00000301807.6
exon_skip_382335336902505:36902651:36905809:36905971:36915616:3691572436905809:36905971ENSG00000168016.9ENST00000429976.2,ENST00000301807.6,ENST00000513141.1
exon_skip_382336336905809:36905971:36915616:36915787:36931319:3693145136915616:36915787ENSG00000168016.9ENST00000429976.2,ENST00000301807.6
exon_skip_382337336933692:36933831:36934391:36934475:36937130:3693724936934391:36934475ENSG00000168016.9ENST00000429976.2,ENST00000505962.1,ENST00000301807.6
exon_skip_382338336934391:36934475:36937130:36937249:36940599:3694064936937130:36937249ENSG00000168016.9ENST00000429976.2,ENST00000505962.1,ENST00000301807.6

check button PSI values of skipped exons in TCGA.
psi tcga

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Exon skipping events with PSIs in GTEx for TRANK1

check button Information of exkip skipping event in GTEx
Exon skip IDchrExons involved in exon skippingSkipped exonENSGENSTs
exon_skip_382323336872363:36875410:36876252:36876398:36879862:3687999536876252:36876398ENSG00000168016.9ENST00000428977.2,ENST00000429976.2,ENST00000301807.6
exon_skip_382327336876252:36876398:36879862:36879995:36880103:3688020736879862:36879995ENSG00000168016.9ENST00000428977.2,ENST00000429976.2,ENST00000301807.6
exon_skip_382329336880103:36880207:36884112:36884201:36887738:3688789536884112:36884201ENSG00000168016.9ENST00000428977.2,ENST00000429976.2,ENST00000301807.6
exon_skip_382330336887738:36887895:36888690:36888837:36893209:3689334736888690:36888837ENSG00000168016.9ENST00000428977.2,ENST00000429976.2,ENST00000301807.6
exon_skip_382334336893636:36893836:36896663:36899540:36900208:3690037436896663:36899540ENSG00000168016.9ENST00000429976.2,ENST00000301807.6
exon_skip_382335336902505:36902651:36905809:36905971:36915616:3691572436905809:36905971ENSG00000168016.9ENST00000429976.2,ENST00000301807.6,ENST00000513141.1
exon_skip_382336336905809:36905971:36915616:36915787:36931319:3693145136915616:36915787ENSG00000168016.9ENST00000429976.2,ENST00000301807.6
exon_skip_382337336933692:36933831:36934391:36934475:36937130:3693724936934391:36934475ENSG00000168016.9ENST00000429976.2,ENST00000301807.6,ENST00000505962.1
exon_skip_382338336934391:36934475:36937130:36937249:36940599:3694064936937130:36937249ENSG00000168016.9ENST00000429976.2,ENST00000301807.6,ENST00000505962.1

check button PSI values of skipped exons in GTEx.
psi gtex

* Skipped exon sequences.

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Open reading frame (ORF) annotation in the exon skipping event for TRANK1

check button Open reading frame (ORF) of individual exon skipping events in TCGA based on the Ensembl gene structure combined from isoforms.
ENSTStart of skipped exonEnd of skipped exonORF
ENST000004299763687625236876398Frame-shift
ENST000004299763687986236879995Frame-shift
ENST000004299763688411236884201Frame-shift
ENST000004299763693713036937249Frame-shift
ENST000004299763688869036888837In-frame
ENST000004299763689666336899540In-frame
ENST000004299763690580936905971In-frame
ENST000004299763691561636915787In-frame
ENST000004299763693439136934475In-frame

check button Open reading frame (ORF) of individual exon skipping events in GTEx based on the Ensembl gene structure combined from isoforms.
ENSTStart of skipped exonEnd of skipped exonORF
ENST000004299763687625236876398Frame-shift
ENST000004299763687986236879995Frame-shift
ENST000004299763688411236884201Frame-shift
ENST000004299763693713036937249Frame-shift
ENST000004299763688869036888837In-frame
ENST000004299763689666336899540In-frame
ENST000004299763690580936905971In-frame
ENST000004299763691561636915787In-frame
ENST000004299763693439136934475In-frame

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Infer the effects of exon skipping event on protein functional features for TRANK1

check button Exon skipping at the protein sequence level and followed lost functional features.
* Click on the image to enlarge it in a new window.
prot feature distribution

check button Loci of skipped exons in TCGA across genomic, transcript, and protein sequence levels of In-frame cases.
ENSTLength of mRNALength of AA seq.Genomic startGenomic endmRNA startmRNA endAA startAA end
ENST000004299761049829253693439136934475669752140168
ENST00000429976104982925369156163691578710241194258315
ENST00000429976104982925369058093690597111951356315369
ENST000004299761049829253689666336899540178946655131472
ENST0000042997610498292536888690368888375004515015851634

check button Loci of skipped exons in GTEx across genomic, transcript, and protein sequence levels of In-frame cases.
ENSTLength of mRNALength of AA seq.Genomic startGenomic endmRNA startmRNA endAA startAA end
ENST000004299761049829253693439136934475669752140168
ENST00000429976104982925369156163691578710241194258315
ENST00000429976104982925369058093690597111951356315369
ENST000004299761049829253689666336899540178946655131472
ENST0000042997610498292536888690368888375004515015851634

check button Lost protein functional features of individual exon skipping events in TCGA.
UniProt acc.Start of exon skipping (AA)End of exon skipping (AA)Protein feature start (AA)Protein feature end (AA)Category of protein featureDescription of feature
O1505014016812925ChainID=PRO_0000348238;Note=TPR and ankyrin repeat-containing protein 1
O15050140168153153Natural variantID=VAR_061021;Note=P->L;Dbxref=dbSNP:rs17201603
O15050140168168198RepeatNote=ANK 1
O1505025831512925ChainID=PRO_0000348238;Note=TPR and ankyrin repeat-containing protein 1
O15050258315240276RepeatNote=ANK 3
O1505031536912925ChainID=PRO_0000348238;Note=TPR and ankyrin repeat-containing protein 1
O15050513147212925ChainID=PRO_0000348238;Note=TPR and ankyrin repeat-containing protein 1
O15050513147210761115Compositional biasNote=Glu-rich
O150505131472703703Natural variantID=VAR_046117;Note=P->L;Dbxref=dbSNP:rs17201603
O15050513147210901090Natural variantID=VAR_046118;Note=E->G;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:14702039,ECO:0000269|PubMed:9205841;Dbxref=dbSNP:rs11712950,PMID:14702039,PMID:9205841
O150505131472497518RepeatNote=ANK 5
O150505131472546575RepeatNote=ANK 6
O15050513147212861286Sequence conflictNote=I->V;Ontology_term=ECO:0000305;evidence=ECO:0000305
O150501585163412925ChainID=PRO_0000348238;Note=TPR and ankyrin repeat-containing protein 1


check button Lost protein functional features of individual exon skipping events in GTEx.
UniProt acc.Start of exon skipping (AA)End of exon skipping (AA)Protein feature start (AA)Protein feature end (AA)Category of protein featureDescription of feature
O1505014016812925ChainID=PRO_0000348238;Note=TPR and ankyrin repeat-containing protein 1
O15050140168153153Natural variantID=VAR_061021;Note=P->L;Dbxref=dbSNP:rs17201603
O15050140168168198RepeatNote=ANK 1
O1505025831512925ChainID=PRO_0000348238;Note=TPR and ankyrin repeat-containing protein 1
O15050258315240276RepeatNote=ANK 3
O1505031536912925ChainID=PRO_0000348238;Note=TPR and ankyrin repeat-containing protein 1
O15050513147212925ChainID=PRO_0000348238;Note=TPR and ankyrin repeat-containing protein 1
O15050513147210761115Compositional biasNote=Glu-rich
O150505131472703703Natural variantID=VAR_046117;Note=P->L;Dbxref=dbSNP:rs17201603
O15050513147210901090Natural variantID=VAR_046118;Note=E->G;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:14702039,ECO:0000269|PubMed:9205841;Dbxref=dbSNP:rs11712950,PMID:14702039,PMID:9205841
O150505131472497518RepeatNote=ANK 5
O150505131472546575RepeatNote=ANK 6
O15050513147212861286Sequence conflictNote=I->V;Ontology_term=ECO:0000305;evidence=ECO:0000305
O150501585163412925ChainID=PRO_0000348238;Note=TPR and ankyrin repeat-containing protein 1


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SNVs in the skipped exons for TRANK1

check button - Lollipop plot for presenting exon skipping associated SNVs.
* Click on the image to enlarge it in a new window.
lollipop

check button - Differential PSIs between mutated versus non-mutated samples.

check button - Non-synonymous mutations located in the skipped exons in TCGA.
Cancer typeSampleESIDSkipped exon startSkipped exon endMutation startMutation endMutation typeReference seqMutation seqAAchange
KIRCTCGA-AS-3777-01exon_skip_382323
36876253368763983687634536876345Frame_Shift_DelG-p.F1813fs
LIHCTCGA-DD-A3A0-01exon_skip_382323
36876253368763983687637936876379Frame_Shift_DelA-p.F1802fs
STADTCGA-B7-A5TI-01exon_skip_382334
36896664368995403689682036896820Frame_Shift_DelC-p.D871fs
LIHCTCGA-DD-A39Y-01exon_skip_382334
36896664368995403689688336896883Frame_Shift_DelG-p.Q1400fs
LIHCTCGA-DD-A39Y-01exon_skip_382334
36896664368995403689715436897154Frame_Shift_DelA-p.F1309fs
LIHCTCGA-DD-A39Y-01exon_skip_382334
36896664368995403689715436897154Frame_Shift_DelA-p.L1310X
LIHCTCGA-G3-A3CJ-01exon_skip_382334
36896664368995403689720536897205Frame_Shift_DelT-p.K742fs
LIHCTCGA-DD-A39Y-01exon_skip_382334
36896664368995403689742736897427Frame_Shift_DelA-p.F1218fs
LIHCTCGA-DD-A39Y-01exon_skip_382334
36896664368995403689757636897576Frame_Shift_DelA-p.S1169fs
LIHCTCGA-DD-A39Y-01exon_skip_382334
36896664368995403689774736897747Frame_Shift_DelG-p.Q1112fs
LIHCTCGA-DD-A3A0-01exon_skip_382334
36896664368995403689806036898060Frame_Shift_DelG-p.P1007fs
COADTCGA-D5-6540-01exon_skip_382334
36896664368995403689816636898166Frame_Shift_DelG-p.P972fs
LIHCTCGA-DD-A3A0-01exon_skip_382334
36896664368995403689841736898417Frame_Shift_DelC-p.G888fs
LIHCTCGA-G3-A3CJ-01exon_skip_382334
36896664368995403689908136899081Frame_Shift_DelG-p.P117fs
STADTCGA-BR-6452-01exon_skip_382334
36896664368995403689742636897427Frame_Shift_Ins-Ap.L1219fs
LIHCTCGA-BC-A112-01exon_skip_382334
36896664368995403689916836899169Frame_Shift_Ins-Gp.G88fs
SKCMTCGA-WE-AAA3-06exon_skip_382329
36884113368842013688411636884116Nonsense_MutationCTp.W1165*
SKCMTCGA-EE-A29R-06exon_skip_382334
36896664368995403689689536896895Nonsense_MutationGAp.Q1396*
SKCMTCGA-EE-A29R-06exon_skip_382334
36896664368995403689689536896895Nonsense_MutationGAp.Q1396X
SKCMTCGA-FW-A3R5-06exon_skip_382334
36896664368995403689701836897018Nonsense_MutationGAp.Q1355*
SKCMTCGA-FW-A3R5-06exon_skip_382334
36896664368995403689701836897018Nonsense_MutationGAp.Q1355X
SKCMTCGA-FW-A3R5-06exon_skip_382334
36896664368995403689701836897018Nonsense_MutationGAp.Q805*
UCECTCGA-AX-A05Z-01exon_skip_382334
36896664368995403689716836897168Nonsense_MutationCAp.E755*
UCSTCGA-ND-A4WC-01exon_skip_382334
36896664368995403689716836897168Nonsense_MutationCAp.E1305*
UCSTCGA-ND-A4WC-01exon_skip_382334
36896664368995403689716836897168Nonsense_MutationCAp.E1305X
UCSTCGA-ND-A4WC-01exon_skip_382334
36896664368995403689716836897168Nonsense_MutationCAp.E755*
BLCATCGA-DK-A6AW-01exon_skip_382334
36896664368995403689724336897243Nonsense_MutationCAp.E730*
UCECTCGA-D1-A176-01exon_skip_382334
36896664368995403689738736897387Nonsense_MutationCAp.G1232*
STADTCGA-VQ-A8P2-01exon_skip_382334
36896664368995403689772336897723Nonsense_MutationCAp.G1120*
SKCMTCGA-GN-A4U3-06exon_skip_382334
36896664368995403689794036897940Nonsense_MutationCTp.W497*
SKCMTCGA-D3-A8GI-06exon_skip_382334
36896664368995403689824836898248Nonsense_MutationGAp.Q945*
SKCMTCGA-FW-A3R5-06exon_skip_382334
36896664368995403689876336898763Nonsense_MutationCTp.W223*
SKCMTCGA-FW-A3R5-06exon_skip_382334
36896664368995403689876336898763Nonsense_MutationCTp.W773*
SKCMTCGA-FW-A3R5-06exon_skip_382334
36896664368995403689876336898763Nonsense_MutationCTp.W773X
HNSCTCGA-CN-4736-01exon_skip_382334
36896664368995403689918136899181Nonsense_MutationGAp.Q84*
SKCMTCGA-FR-A726-01exon_skip_382334
36896664368995403689941536899415Nonsense_MutationGAp.Q556*
SKCMTCGA-EE-A29D-06exon_skip_382334
36896664368995403689945436899454Nonsense_MutationGAp.Q543*
SKCMTCGA-EE-A29D-06exon_skip_382334
36896664368995403689945436899454Nonsense_MutationGAp.Q543X
THYMTCGA-X7-A8DG-01exon_skip_382335
36905810369059713690581336905813Nonsense_MutationGAp.Q369X
UCECTCGA-AX-A0J0-01exon_skip_382335
36905810369059713690597236905972Splice_SiteCANULL

check button - Depth of coverage in the three exons composing exon skipping event
Depth of coverage in three exonsMutation description

check button - Non-synonymous mutations located in the skipped exons in CCLE.
SampleSkipped exon startSkipped exon endMutation startMutation endMutation typeReference seqMutation seqAAchange
ES7_BONE36896664368995403689841436898414Frame_Shift_DelC-p.R889fs
HEC59_ENDOMETRIUM36896664368995403689879236898792Frame_Shift_DelC-p.G763fs
HT_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE36896664368995403689887536898875Frame_Shift_DelC-p.A736fs
LNCAPCLONEFGC_PROSTATE36934392369344753693444936934449Frame_Shift_DelT-p.K149fs
U343_CENTRAL_NERVOUS_SYSTEM36876253368763983687625936876259Missense_MutationACp.V1842G
SW48_LARGE_INTESTINE36876253368763983687635036876350Missense_MutationCTp.A1812T
SNU81_LARGE_INTESTINE36876253368763983687635036876350Missense_MutationCTp.A1812T
SUDHL6_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE36879863368799953687999036879990Missense_MutationTCp.K1753R
SNU1040_LARGE_INTESTINE36884113368842013688413336884133Missense_MutationCTp.A1710T
CCRFCEM_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE36888691368888373688877036888770Missense_MutationCTp.R1608Q
HEC108_ENDOMETRIUM36896664368995403689676836896768Missense_MutationCTp.R1438H
DMS114_LUNG36896664368995403689676936896769Missense_MutationGCp.R1438G
GP2D_LARGE_INTESTINE36896664368995403689683436896834Missense_MutationATp.M1416K
GP5D_LARGE_INTESTINE36896664368995403689683436896834Missense_MutationATp.M1416K
MEWO_SKIN36896664368995403689686036896860Missense_MutationCTp.M1407I
NCIH64_LUNG36896664368995403689686236896862Missense_MutationTCp.M1407V
KPMRTRY_SOFT_TISSUE36896664368995403689686436896864Missense_MutationATp.L1406Q
HEC108_ENDOMETRIUM36896664368995403689688036896880Missense_MutationCTp.A1401T
RCCFG2_KIDNEY36896664368995403689691936896919Missense_MutationGAp.H1388Y
MHHPREB1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE36896664368995403689702336897023Missense_MutationACp.L1353R
LNCAPCLONEFGC_PROSTATE36896664368995403689712836897128Missense_MutationCAp.S1318I
HCC2998_LARGE_INTESTINE36896664368995403689723336897233Missense_MutationTGp.K1283T
SNU1040_LARGE_INTESTINE36896664368995403689724236897242Missense_MutationTCp.E1280G
LN229_CENTRAL_NERVOUS_SYSTEM36896664368995403689724836897248Missense_MutationGAp.T1278M
COLO679_SKIN36896664368995403689724836897248Missense_MutationGAp.T1278M
PC9_LUNG36896664368995403689726336897263Missense_MutationGAp.P1273L
TTC466_BONE36896664368995403689728236897282Missense_MutationGTp.R1267S
KYSE180_OESOPHAGUS36896664368995403689743536897435Missense_MutationGAp.P1216S
MM386_SKIN36896664368995403689747736897477Missense_MutationATp.S1202T
HCC1395_BREAST36896664368995403689750136897501Missense_MutationCTp.E1194K
HCC1395_MATCHED_NORMAL_TISSUE36896664368995403689750136897501Missense_MutationCTp.E1194K
ONCODG1_OVARY36896664368995403689753736897537Missense_MutationCAp.D1182Y
CS1_BONE36896664368995403689753736897537Missense_MutationCAp.D1182Y
ISHIKAWAHERAKLIO02ER_ENDOMETRIUM36896664368995403689754936897549Missense_MutationAGp.Y1178H
LNCAPCLONEFGC_PROSTATE36896664368995403689757836897578Missense_MutationACp.L1168R
NCIH2291_LUNG36896664368995403689772536897725Missense_MutationCAp.G1119V
NCIH2291_LUNG36896664368995403689772536897726Missense_MutationCCAAp.G1119L
IGROV1_OVARY36896664368995403689775236897752Missense_MutationTGp.D1110A
TC106_BONE36896664368995403689775436897754Missense_MutationTCp.I1109M
451LU_SKIN36896664368995403689779836897798Missense_MutationCTp.E1095K
SW684_SOFT_TISSUE36896664368995403689779836897798Missense_MutationCTp.E1095K
KYSE410_OESOPHAGUS36896664368995403689787536897875Missense_MutationACp.V1069G
SW982_SOFT_TISSUE36896664368995403689789736897897Missense_MutationTCp.S1062G
NCIH1666_LUNG36896664368995403689791236897912Missense_MutationCAp.A1057S
SNU213_PANCREAS36896664368995403689791736897917Missense_MutationTGp.E1055A
GAK_SKIN36896664368995403689803436898034Missense_MutationGAp.A1016V
PK45H_PANCREAS36896664368995403689814436898144Missense_MutationTGp.E979D
GP2D_LARGE_INTESTINE36896664368995403689819936898199Missense_MutationCTp.G961D
GP5D_LARGE_INTESTINE36896664368995403689819936898199Missense_MutationCTp.G961D
MRKNU1_BREAST36896664368995403689824236898242Missense_MutationGTp.R947S
MCC142_SKIN36896664368995403689825636898256Missense_MutationAGp.M942T
CTV1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE36896664368995403689832936898329Missense_MutationAGp.Y918H
WM983B_SKIN36896664368995403689838636898386Missense_MutationCTp.D899N
SNU1040_LARGE_INTESTINE36896664368995403689839436898394Missense_MutationCTp.R896Q
MKN74_STOMACH36896664368995403689842736898427Missense_MutationTCp.E885G
MKN28_STOMACH36896664368995403689842736898427Missense_MutationTCp.E885G
HEC59_ENDOMETRIUM36896664368995403689849036898490Missense_MutationGAp.S864F
NK92MI_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE36896664368995403689858036898580Missense_MutationCTp.R834Q
RS411_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE36896664368995403689858036898580Missense_MutationCTp.R834Q
HEC1A_ENDOMETRIUM36896664368995403689870136898701Missense_MutationAGp.C794R
HEC1_ENDOMETRIUM36896664368995403689870136898701Missense_MutationAGp.C794R
JHUEM1_ENDOMETRIUM36896664368995403689879636898796Missense_MutationCTp.R762K
JURLMK1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE36896664368995403689887736898877Missense_MutationCTp.G735E
L1236_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE36896664368995403689888736898887Missense_MutationGCp.L732V
HS863T_FIBROBLAST36896664368995403689889236898892Missense_MutationGAp.P730L
HCC1569_BREAST36896664368995403689909236899092Missense_MutationCGp.W663C
TC71_BONE36896664368995403689913336899133Missense_MutationCAp.A650S
SARC9371_BONE36896664368995403689933436899334Missense_MutationCTp.E583K
HEC251_ENDOMETRIUM36896664368995403689934836899348Missense_MutationTGp.N578T
UMUC16_URINARY_TRACT36905810369059713690583036905830Missense_MutationCTp.R363H
CCK81_LARGE_INTESTINE36905810369059713690589136905891Missense_MutationAGp.S343P
KOPN8_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE36937131369372493693722036937220Missense_MutationGAp.P111S
NCIH524_LUNG36937131369372493693722436937224Missense_MutationGTp.F109L
BB65RCC_KIDNEY36888691368888373688879436888794Nonsense_MutationGTp.S1600*
NCIH2291_LUNG36896664368995403689772636897726Nonsense_MutationCAp.G1119*
UACC62_SKIN36896664368995403689791936897919Nonsense_MutationCTp.W1054*
P31FUJ_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE36896664368995403689824836898248Nonsense_MutationGAp.Q945*
639V_URINARY_TRACT36896664368995403689858136898581Nonsense_MutationGAp.R834*
JURKAT_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE36896664368995403689949536899495Nonsense_MutationCTp.W529*

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Splicing Quantitative Trait Loci (sQTL) in the exon skipping event for TRANK1

check button sQTL information located at the skipped exons.
Exon skip IDChromosomeThree exonsSkippped exonENSTCancer typeSNP idLocationDNA change (ref/var)P-value

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Splicing Quantitative Trait Methylation (sQTM) in the skipped exon for TRANK1


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Survival analysis of Splicing Quantitative Trait Methylation (sQTM) in the skipped exon for TRANK1


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RelatedDrugs for TRANK1

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.0 2018-04-02)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for TRANK1

check button Diseases associated with this gene.
(DisGeNet 4.0)
GeneDisease IDDisease name# pubmedsSource