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| Open reading frame (ORF) annotation in the exon skipping event |
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| Splicing Quantitative Trait Loci (sQTLs) in the skipped exons |
| Splicing Quantitative Trait Methylation (sQTM) in the skipped exon |
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Gene summary for CHD1L |
 Gene summary |
| Gene information | Gene symbol | CHD1L | Gene ID | 9557 |
| Gene name | chromodomain helicase DNA binding protein 1 like | |
| Synonyms | ALC1|CHDL | |
| Cytomap | 1q21.1 | |
| Type of gene | protein-coding | |
| Description | chromodomain-helicase-DNA-binding protein 1-likeamplified in liver cancer 1amplified in liver cancer protein 1 | |
| Modification date | 20180522 | |
| UniProtAcc | Q86WJ1 | |
| Context | PubMed: CHD1L [Title/Abstract] AND exon [Title/Abstract] AND skip [Title/Abstract] - Title (PMID) |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
| CHD1L | GO:0006338 | chromatin remodeling | 19661379 |
| CHD1L | GO:0006974 | cellular response to DNA damage stimulus | 19661379 |
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Exon skipping events across known transcript of Ensembl for CHD1L from UCSC genome browser |
| Skipped exons in TCGA and GTEx based on Ensembl gene isoform structure. * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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Gene isoform structures and expression levels for CHD1L |
| Expression levels of gene isoforms across TCGA. |
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| Expression levels of gene isoforms across GTEx. |
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Exon skipping events with PSIs in TCGA for CHD1L |
| Information of exkip skipping event in TCGA. |
| Exon skip ID | chr | Exons involved in exon skipping | Skipped exon | ENSG | ENSTs |
| exon_skip_9411 | 1 | 146714395:146714480:146724277:146724390:146726524:146726631 | 146724277:146724390 | ENSG00000131778.13 | ENST00000369258.4,ENST00000492728.1,ENST00000467213.1 |
| exon_skip_9421 | 1 | 146714395:146714480:146731490:146731572:146737590:146737746 | 146731490:146731572 | ENSG00000131778.13 | ENST00000361293.5 |
| exon_skip_9424 | 1 | 146714395:146714480:146737590:146737746:146739084:146739177 | 146737590:146737746 | ENSG00000131778.13 | ENST00000369259.3,ENST00000488864.1 |
| exon_skip_9426 | 1 | 146724277:146724390:146726524:146726631:146727467:146727582 | 146726524:146726631 | ENSG00000131778.13 | ENST00000369258.4,ENST00000431239.1,ENST00000492728.1,ENST00000467213.1 |
| exon_skip_9430 | 1 | 146727467:146727582:146728184:146728216:146731490:146731572 | 146728184:146728216 | ENSG00000131778.13 | ENST00000369258.4,ENST00000431239.1,ENST00000492728.1,ENST00000467213.1 |
| exon_skip_9432 | 1 | 146728184:146728216:146731490:146731572:146736080:146736243 | 146731490:146731572 | ENSG00000131778.13 | ENST00000369258.4,ENST00000431239.1,ENST00000467213.1 |
| exon_skip_9435 | 1 | 146731490:146731572:146736080:146736243:146737590:146737746 | 146736080:146736243 | ENSG00000131778.13 | ENST00000369258.4,ENST00000431239.1,ENST00000467213.1 |
| exon_skip_9442 | 1 | 146739084:146739177:146740440:146740537:146747016:146747072 | 146740440:146740537 | ENSG00000131778.13 | ENST00000467213.1 |
| exon_skip_9446 | 1 | 146740440:146740537:146742592:146742666:146743831:146743942 | 146742592:146742666 | ENSG00000131778.13 | ENST00000361293.5,ENST00000369258.4,ENST00000369259.3,ENST00000488864.1 |
| exon_skip_9455 | 1 | 146742592:146742666:146743831:146743942:146747016:146747072 | 146743831:146743942 | ENSG00000131778.13 | ENST00000361293.5,ENST00000369258.4,ENST00000369259.3,ENST00000488864.1 |
| exon_skip_9462 | 1 | 146747767:146747921:146751698:146751864:146756023:146756172 | 146751698:146751864 | ENSG00000131778.13 | ENST00000361293.5,ENST00000369258.4,ENST00000369259.3,ENST00000431239.1,ENST00000467213.1 |
| exon_skip_9468 | 1 | 146751698:146751864:146756023:146756172:146757000:146757164 | 146756023:146756172 | ENSG00000131778.13 | ENST00000361293.5,ENST00000369258.4,ENST00000369259.3,ENST00000431239.1,ENST00000467213.1 |
| exon_skip_9472 | 1 | 146757000:146757164:146757974:146758177:146759313:146759412 | 146757974:146758177 | ENSG00000131778.13 | ENST00000361293.5,ENST00000369258.4,ENST00000369259.3,ENST00000431239.1,ENST00000467213.1 |
| exon_skip_9474 | 1 | 146763163:146763234:146765291:146765406:146766090:146766199 | 146765291:146765406 | ENSG00000131778.13 | ENST00000361293.5,ENST00000369258.4,ENST00000369259.3,ENST00000431239.1,ENST00000467213.1 |
| PSI values of skipped exons in TCGA. |
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Exon skipping events with PSIs in GTEx for CHD1L |
| Information of exkip skipping event in GTEx |
| Exon skip ID | chr | Exons involved in exon skipping | Skipped exon | ENSG | ENSTs |
| exon_skip_9411 | 1 | 146714395:146714480:146724277:146724390:146726524:146726631 | 146724277:146724390 | ENSG00000131778.13 | ENST00000369258.4,ENST00000467213.1,ENST00000492728.1 |
| exon_skip_9421 | 1 | 146714395:146714480:146731490:146731572:146737590:146737746 | 146731490:146731572 | ENSG00000131778.13 | ENST00000361293.5 |
| exon_skip_9424 | 1 | 146714395:146714480:146737590:146737746:146739084:146739177 | 146737590:146737746 | ENSG00000131778.13 | ENST00000369259.3,ENST00000488864.1 |
| exon_skip_9426 | 1 | 146724277:146724390:146726524:146726631:146727467:146727582 | 146726524:146726631 | ENSG00000131778.13 | ENST00000431239.1,ENST00000369258.4,ENST00000467213.1,ENST00000492728.1 |
| exon_skip_9430 | 1 | 146727467:146727582:146728184:146728216:146731490:146731572 | 146728184:146728216 | ENSG00000131778.13 | ENST00000431239.1,ENST00000369258.4,ENST00000467213.1,ENST00000492728.1 |
| exon_skip_9432 | 1 | 146728184:146728216:146731490:146731572:146736080:146736243 | 146731490:146731572 | ENSG00000131778.13 | ENST00000431239.1,ENST00000369258.4,ENST00000467213.1 |
| exon_skip_9435 | 1 | 146731490:146731572:146736080:146736243:146737590:146737746 | 146736080:146736243 | ENSG00000131778.13 | ENST00000431239.1,ENST00000369258.4,ENST00000467213.1 |
| exon_skip_9442 | 1 | 146739084:146739177:146740440:146740537:146747016:146747072 | 146740440:146740537 | ENSG00000131778.13 | ENST00000467213.1 |
| exon_skip_9446 | 1 | 146740440:146740537:146742592:146742666:146743831:146743942 | 146742592:146742666 | ENSG00000131778.13 | ENST00000369259.3,ENST00000488864.1,ENST00000369258.4,ENST00000361293.5 |
| exon_skip_9455 | 1 | 146742592:146742666:146743831:146743942:146747016:146747072 | 146743831:146743942 | ENSG00000131778.13 | ENST00000369259.3,ENST00000488864.1,ENST00000369258.4,ENST00000361293.5 |
| exon_skip_9462 | 1 | 146747767:146747921:146751698:146751864:146756023:146756172 | 146751698:146751864 | ENSG00000131778.13 | ENST00000431239.1,ENST00000369259.3,ENST00000369258.4,ENST00000467213.1,ENST00000361293.5 |
| exon_skip_9468 | 1 | 146751698:146751864:146756023:146756172:146757000:146757164 | 146756023:146756172 | ENSG00000131778.13 | ENST00000431239.1,ENST00000369259.3,ENST00000369258.4,ENST00000467213.1,ENST00000361293.5 |
| exon_skip_9472 | 1 | 146757000:146757164:146757974:146758177:146759313:146759412 | 146757974:146758177 | ENSG00000131778.13 | ENST00000431239.1,ENST00000369259.3,ENST00000369258.4,ENST00000467213.1,ENST00000361293.5 |
| exon_skip_9474 | 1 | 146763163:146763234:146765291:146765406:146766090:146766199 | 146765291:146765406 | ENSG00000131778.13 | ENST00000431239.1,ENST00000369259.3,ENST00000369258.4,ENST00000467213.1,ENST00000361293.5 |
| PSI values of skipped exons in GTEx. |
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| * Skipped exon sequences. |
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Open reading frame (ORF) annotation in the exon skipping event for CHD1L |
| Open reading frame (ORF) of individual exon skipping events in TCGA based on the Ensembl gene structure combined from isoforms. |
| ENST | Start of skipped exon | End of skipped exon | ORF |
| ENST00000369258 | 146724277 | 146724390 | Frame-shift |
| ENST00000369258 | 146726524 | 146726631 | Frame-shift |
| ENST00000369258 | 146728184 | 146728216 | Frame-shift |
| ENST00000369258 | 146731490 | 146731572 | Frame-shift |
| ENST00000369258 | 146736080 | 146736243 | Frame-shift |
| ENST00000369258 | 146742592 | 146742666 | Frame-shift |
| ENST00000369258 | 146751698 | 146751864 | Frame-shift |
| ENST00000369258 | 146756023 | 146756172 | Frame-shift |
| ENST00000369258 | 146757974 | 146758177 | Frame-shift |
| ENST00000369258 | 146765291 | 146765406 | Frame-shift |
| ENST00000369258 | 146743831 | 146743942 | In-frame |
| Open reading frame (ORF) of individual exon skipping events in GTEx based on the Ensembl gene structure combined from isoforms. |
| ENST | Start of skipped exon | End of skipped exon | ORF |
| ENST00000369258 | 146724277 | 146724390 | Frame-shift |
| ENST00000369258 | 146726524 | 146726631 | Frame-shift |
| ENST00000369258 | 146728184 | 146728216 | Frame-shift |
| ENST00000369258 | 146731490 | 146731572 | Frame-shift |
| ENST00000369258 | 146736080 | 146736243 | Frame-shift |
| ENST00000369258 | 146742592 | 146742666 | Frame-shift |
| ENST00000369258 | 146751698 | 146751864 | Frame-shift |
| ENST00000369258 | 146756023 | 146756172 | Frame-shift |
| ENST00000369258 | 146757974 | 146758177 | Frame-shift |
| ENST00000369258 | 146765291 | 146765406 | Frame-shift |
| ENST00000369258 | 146743831 | 146743942 | In-frame |
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Infer the effects of exon skipping event on protein functional features for CHD1L |
| Exon skipping at the protein sequence level and followed lost functional features. * Click on the image to enlarge it in a new window. |
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| Loci of skipped exons in TCGA across genomic, transcript, and protein sequence levels of In-frame cases. |
| ENST | Length of mRNA | Length of AA seq. | Genomic start | Genomic end | mRNA start | mRNA end | AA start | AA end |
| ENST00000369258 | 2984 | 897 | 146743831 | 146743942 | 1180 | 1290 | 386 | 423 |
| Loci of skipped exons in GTEx across genomic, transcript, and protein sequence levels of In-frame cases. |
| ENST | Length of mRNA | Length of AA seq. | Genomic start | Genomic end | mRNA start | mRNA end | AA start | AA end |
| ENST00000369258 | 2984 | 897 | 146743831 | 146743942 | 1180 | 1290 | 386 | 423 |
| Lost protein functional features of individual exon skipping events in TCGA. |
| UniProt acc. | Start of exon skipping (AA) | End of exon skipping (AA) | Protein feature start (AA) | Protein feature end (AA) | Category of protein feature | Description of feature |
| Lost protein functional features of individual exon skipping events in GTEx. |
| UniProt acc. | Start of exon skipping (AA) | End of exon skipping (AA) | Protein feature start (AA) | Protein feature end (AA) | Category of protein feature | Description of feature |
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SNVs in the skipped exons for CHD1L |
| - Lollipop plot for presenting exon skipping associated SNVs. * Click on the image to enlarge it in a new window. |
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| - Differential PSIs between mutated versus non-mutated samples. |
CHD1L_COAD_exon_skip_9462_psi_boxplot.png |
| - Non-synonymous mutations located in the skipped exons in TCGA. |
| Cancer type | Sample | ESID | Skipped exon start | Skipped exon end | Mutation start | Mutation end | Mutation type | Reference seq | Mutation seq | AAchange |
| LIHC | TCGA-DD-A1EG-01 | exon_skip_9426 | 146726525 | 146726631 | 146726545 | 146726545 | Frame_Shift_Del | T | - | p.Y87fs |
| LIHC | TCGA-DD-A1EG-01 | exon_skip_9432 exon_skip_9421 | 146731491 | 146731572 | 146731534 | 146731534 | Frame_Shift_Del | A | - | p.K180fs |
| LIHC | TCGA-DD-A3A0-01 | exon_skip_9432 exon_skip_9421 | 146731491 | 146731572 | 146731534 | 146731534 | Frame_Shift_Del | A | - | p.K180fs |
| LIHC | TCGA-DD-A3A0-01 | exon_skip_9432 exon_skip_9421 | 146731491 | 146731572 | 146731541 | 146731541 | Frame_Shift_Del | A | - | p.Q182fs |
| LIHC | TCGA-DD-A3A0-01 | exon_skip_9424 | 146737591 | 146737746 | 146737605 | 146737605 | Frame_Shift_Del | A | - | p.K252fs |
| LUAD | TCGA-55-A4DF-01 | exon_skip_9468 | 146756024 | 146756172 | 146756081 | 146756099 | Frame_Shift_Del | ACAGAAAATCATTTGAACA | - | p.DRKSFEQ588fs |
| LIHC | TCGA-G3-A3CJ-01 | exon_skip_9468 | 146756024 | 146756172 | 146756116 | 146756116 | Frame_Shift_Del | A | - | p.K600fs |
| LIHC | TCGA-G3-A3CJ-01 | exon_skip_9468 | 146756024 | 146756172 | 146756131 | 146756131 | Frame_Shift_Del | A | - | p.K605fs |
| LIHC | TCGA-DD-A1EG-01 | exon_skip_9472 | 146757975 | 146758177 | 146758130 | 146758130 | Frame_Shift_Del | C | - | p.T725fs |
| LIHC | TCGA-G3-A3CJ-01 | exon_skip_9472 | 146757975 | 146758177 | 146758144 | 146758144 | Frame_Shift_Del | G | - | p.G730fs |
| LIHC | TCGA-BC-A112-01 | exon_skip_9424 | 146737591 | 146737746 | 146737661 | 146737662 | Frame_Shift_Ins | - | C | p.Q271fs |
| UCEC | TCGA-AP-A0LE-01 | exon_skip_9411 | 146724278 | 146724390 | 146724358 | 146724358 | Nonsense_Mutation | G | T | p.G70* |
| SARC | TCGA-QC-A7B5-01 | exon_skip_9435 | 146736081 | 146736243 | 146736135 | 146736135 | Nonsense_Mutation | C | T | p.Q211* |
| LGG | TCGA-DU-6392-01 | exon_skip_9435 | 146736081 | 146736243 | 146736231 | 146736231 | Nonsense_Mutation | G | T | p.E243* |
| COAD | TCGA-D5-5537-01 | exon_skip_9462 | 146751699 | 146751864 | 146751866 | 146751866 | Splice_Site | T | G | . |
| - Depth of coverage in the three exons composing exon skipping event |
| Depth of coverage in three exons | Mutation description |
 | Sample: TCGA-D5-5537-01 |
| Cancer type: COAD | |
| ESID: exon_skip_9462 | |
| Skipped exon start: 146751699 | |
| Skipped exon end: 146751864 | |
| Mutation start: 146751866 | |
| Mutation end: 146751866 | |
| Mutation type: Splice_Site | |
| Reference seq: T | |
| Mutation seq: G | |
| AAchange: . | |
exon_skip_9462_COAD_TCGA-D5-5537-01.png | |
| - Non-synonymous mutations located in the skipped exons in CCLE. |
| Sample | Skipped exon start | Skipped exon end | Mutation start | Mutation end | Mutation type | Reference seq | Mutation seq | AAchange |
| HEYA8_OVARY | 146743832 | 146743942 | 146743838 | 146743850 | Frame_Shift_Del | GCTATGAGCGTGT | - | p.SYERV389fs |
| HEY_OVARY | 146743832 | 146743942 | 146743838 | 146743850 | Frame_Shift_Del | GCTATGAGCGTGT | - | p.SYERV389fs |
| NCIH748_LUNG | 146751699 | 146751864 | 146751837 | 146751840 | Frame_Shift_Del | GGAG | - | p.GG560fs |
| KARPAS422_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 146724278 | 146724390 | 146724325 | 146724326 | Frame_Shift_Ins | - | A | p.Q59fs |
| UMUC1_URINARY_TRACT | 146765292 | 146765406 | 146765392 | 146765393 | Frame_Shift_Ins | - | A | p.AK831fs |
| DJM1_SKIN | 146743832 | 146743942 | 146743926 | 146743937 | In_Frame_Del | CCTGAGTACTAG | - | p.LSTR419del |
| NCIH1568_LUNG | 146724278 | 146724390 | 146724280 | 146724280 | Missense_Mutation | A | T | p.I44F |
| GP2D_LARGE_INTESTINE | 146726525 | 146726631 | 146726582 | 146726582 | Missense_Mutation | A | C | p.I100L |
| TM31_CENTRAL_NERVOUS_SYSTEM | 146726525 | 146726631 | 146726600 | 146726600 | Missense_Mutation | G | T | p.V106F |
| GP5D_LARGE_INTESTINE | 146731491 | 146731572 | 146731498 | 146731498 | Missense_Mutation | T | C | p.W168R |
| LS180_LARGE_INTESTINE | 146731491 | 146731572 | 146731549 | 146731549 | Missense_Mutation | C | A | p.L185M |
| SNU1066_UPPER_AERODIGESTIVE_TRACT | 146736081 | 146736243 | 146736159 | 146736159 | Missense_Mutation | T | G | p.F219V |
| NCIH596_LUNG | 146736081 | 146736243 | 146736225 | 146736225 | Missense_Mutation | G | C | p.E241Q |
| 253J_URINARY_TRACT | 146737591 | 146737746 | 146737733 | 146737733 | Missense_Mutation | G | T | p.L294F |
| 253JBV_URINARY_TRACT | 146737591 | 146737746 | 146737733 | 146737733 | Missense_Mutation | G | T | p.L294F |
| JHUEM2_ENDOMETRIUM | 146740441 | 146740537 | 146740503 | 146740503 | Missense_Mutation | C | G | p.L351V |
| RERFLCFM_LUNG | 146740441 | 146740537 | 146740521 | 146740521 | Missense_Mutation | G | T | p.A357S |
| TASK1_CENTRAL_NERVOUS_SYSTEM | 146740441 | 146740537 | 146740521 | 146740521 | Missense_Mutation | G | T | p.A357S |
| TK10_KIDNEY | 146742593 | 146742666 | 146742600 | 146742600 | Missense_Mutation | C | T | p.R365W |
| MN60_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 146743832 | 146743942 | 146743846 | 146743846 | Missense_Mutation | C | T | p.R392C |
| HCC2998_LARGE_INTESTINE | 146751699 | 146751864 | 146751715 | 146751715 | Missense_Mutation | A | G | p.K519R |
| WSUNHL_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 146751699 | 146751864 | 146751738 | 146751738 | Missense_Mutation | G | T | p.A527S |
| EN_ENDOMETRIUM | 146751699 | 146751864 | 146751748 | 146751748 | Missense_Mutation | G | A | p.G530E |
| NCIH128_LUNG | 146751699 | 146751864 | 146751819 | 146751819 | Missense_Mutation | G | A | p.A554T |
| JHOS3_OVARY | 146751699 | 146751864 | 146751829 | 146751829 | Missense_Mutation | C | T | p.A557V |
| OCUM1_STOMACH | 146756024 | 146756172 | 146756029 | 146756029 | Missense_Mutation | C | T | p.H571Y |
| TYKNU_OVARY | 146756024 | 146756172 | 146756029 | 146756029 | Missense_Mutation | C | T | p.H571Y |
| KPNYN_AUTONOMIC_GANGLIA | 146756024 | 146756172 | 146756029 | 146756029 | Missense_Mutation | C | T | p.H571Y |
| HUO9_BONE | 146756024 | 146756172 | 146756114 | 146756114 | Missense_Mutation | A | C | p.Q599P |
| CPCN_LUNG | 146756024 | 146756172 | 146756117 | 146756117 | Missense_Mutation | A | C | p.K600T |
| SW48_LARGE_INTESTINE | 146757975 | 146758177 | 146758126 | 146758126 | Missense_Mutation | G | A | p.V724I |
| NB6_AUTONOMIC_GANGLIA | 146757975 | 146758177 | 146758162 | 146758162 | Missense_Mutation | A | G | p.I736V |
| SF172_CENTRAL_NERVOUS_SYSTEM | 146765292 | 146765406 | 146765316 | 146765316 | Missense_Mutation | C | T | p.R806C |
| KARPAS45_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 146765292 | 146765406 | 146765356 | 146765356 | Missense_Mutation | C | T | p.A819V |
| CW2_LARGE_INTESTINE | 146736081 | 146736243 | 146736186 | 146736186 | Nonsense_Mutation | G | T | p.E228* |
| BT483_BREAST | 146757975 | 146758177 | 146758024 | 146758024 | Nonsense_Mutation | G | T | p.E690* |
| NCIH630_LARGE_INTESTINE | 146751699 | 146751864 | 146751864 | 146751864 | Splice_Site | A | C | p.K569Q |
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Splicing Quantitative Trait Loci (sQTL) in the exon skipping event for CHD1L |
| sQTL information located at the skipped exons. |
| Exon skip ID | Chromosome | Three exons | Skippped exon | ENST | Cancer type | SNP id | Location | DNA change (ref/var) | P-value |
| exon_skip_9435 | 1 | 146731490:146731572:146736080:146736243:146737590:146737746 | 146736080:146736243 | ENST00000369258.4,ENST00000431239.1,ENST00000467213.1 | COAD | rs4950315 | chr1:146736092 | A/G | 3.54e-04 |
| exon_skip_9435 | 1 | 146731490:146731572:146736080:146736243:146737590:146737746 | 146736080:146736243 | ENST00000369258.4,ENST00000431239.1,ENST00000467213.1 | BLCA | rs4950315 | chr1:146736092 | A/G | 1.77e-04 |
| exon_skip_9435 | 1 | 146731490:146731572:146736080:146736243:146737590:146737746 | 146736080:146736243 | ENST00000369258.4,ENST00000431239.1,ENST00000467213.1 | HNSC | rs4950315 | chr1:146736092 | A/G | 2.07e-03 |
| exon_skip_9435 | 1 | 146731490:146731572:146736080:146736243:146737590:146737746 | 146736080:146736243 | ENST00000369258.4,ENST00000431239.1,ENST00000467213.1 | LGG | rs4950315 | chr1:146736092 | A/G | 3.98e-17 |
| exon_skip_9435 | 1 | 146731490:146731572:146736080:146736243:146737590:146737746 | 146736080:146736243 | ENST00000369258.4,ENST00000431239.1,ENST00000467213.1 | KIRC | rs4950315 | chr1:146736092 | A/G | 9.14e-04 |
| exon_skip_9435 | 1 | 146731490:146731572:146736080:146736243:146737590:146737746 | 146736080:146736243 | ENST00000369258.4,ENST00000431239.1,ENST00000467213.1 | LUAD | rs4950315 | chr1:146736092 | A/G | 2.80e-05 |
| exon_skip_9435 | 1 | 146731490:146731572:146736080:146736243:146737590:146737746 | 146736080:146736243 | ENST00000369258.4,ENST00000431239.1,ENST00000467213.1 | LIHC | rs4950315 | chr1:146736092 | A/G | 2.36e-07 |
| exon_skip_9435 | 1 | 146731490:146731572:146736080:146736243:146737590:146737746 | 146736080:146736243 | ENST00000369258.4,ENST00000431239.1,ENST00000467213.1 | LUSC | rs4950315 | chr1:146736092 | A/G | 3.92e-09 |
| exon_skip_9435 | 1 | 146731490:146731572:146736080:146736243:146737590:146737746 | 146736080:146736243 | ENST00000369258.4,ENST00000431239.1,ENST00000467213.1 | OV | rs4950315 | chr1:146736092 | A/G | 8.43e-06 |
| exon_skip_9435 | 1 | 146731490:146731572:146736080:146736243:146737590:146737746 | 146736080:146736243 | ENST00000369258.4,ENST00000431239.1,ENST00000467213.1 | PCPG | rs4950315 | chr1:146736092 | A/G | 1.02e-05 |
| exon_skip_9435 | 1 | 146731490:146731572:146736080:146736243:146737590:146737746 | 146736080:146736243 | ENST00000369258.4,ENST00000431239.1,ENST00000467213.1 | PRAD | rs4950315 | chr1:146736092 | A/G | 2.75e-03 |
| exon_skip_9435 | 1 | 146731490:146731572:146736080:146736243:146737590:146737746 | 146736080:146736243 | ENST00000369258.4,ENST00000431239.1,ENST00000467213.1 | STAD | rs4950315 | chr1:146736092 | A/G | 1.13e-06 |
| exon_skip_9435 | 1 | 146731490:146731572:146736080:146736243:146737590:146737746 | 146736080:146736243 | ENST00000369258.4,ENST00000431239.1,ENST00000467213.1 | THCA | rs4950315 | chr1:146736092 | A/G | 2.49e-06 |
| exon_skip_9442 | 1 | 146739084:146739177:146740440:146740537:146747016:146747072 | 146740440:146740537 | ENST00000467213.1 | COAD | rs17356233 | chr1:146740502 | C/G | 6.83e-04 |
| exon_skip_9442 | 1 | 146739084:146739177:146740440:146740537:146747016:146747072 | 146740440:146740537 | ENST00000467213.1 | BLCA | rs17356233 | chr1:146740502 | C/G | 1.60e-04 |
| exon_skip_9442 | 1 | 146739084:146739177:146740440:146740537:146747016:146747072 | 146740440:146740537 | ENST00000467213.1 | HNSC | rs17356233 | chr1:146740502 | C/G | 1.26e-03 |
| exon_skip_9442 | 1 | 146739084:146739177:146740440:146740537:146747016:146747072 | 146740440:146740537 | ENST00000467213.1 | BRCA | rs17356233 | chr1:146740502 | C/G | 3.48e-10 |
| exon_skip_9442 | 1 | 146739084:146739177:146740440:146740537:146747016:146747072 | 146740440:146740537 | ENST00000467213.1 | LGG | rs17356233 | chr1:146740502 | C/G | 2.20e-17 |
| exon_skip_9442 | 1 | 146739084:146739177:146740440:146740537:146747016:146747072 | 146740440:146740537 | ENST00000467213.1 | KIRC | rs17356233 | chr1:146740502 | C/G | 1.84e-03 |
| exon_skip_9442 | 1 | 146739084:146739177:146740440:146740537:146747016:146747072 | 146740440:146740537 | ENST00000467213.1 | LUAD | rs17356233 | chr1:146740502 | C/G | 1.27e-05 |
| exon_skip_9442 | 1 | 146739084:146739177:146740440:146740537:146747016:146747072 | 146740440:146740537 | ENST00000467213.1 | LIHC | rs17356233 | chr1:146740502 | C/G | 8.79e-08 |
| exon_skip_9442 | 1 | 146739084:146739177:146740440:146740537:146747016:146747072 | 146740440:146740537 | ENST00000467213.1 | LUSC | rs17356233 | chr1:146740502 | C/G | 1.96e-08 |
| exon_skip_9442 | 1 | 146739084:146739177:146740440:146740537:146747016:146747072 | 146740440:146740537 | ENST00000467213.1 | OV | rs17356233 | chr1:146740502 | C/G | 1.69e-05 |
| exon_skip_9442 | 1 | 146739084:146739177:146740440:146740537:146747016:146747072 | 146740440:146740537 | ENST00000467213.1 | PCPG | rs17356233 | chr1:146740502 | C/G | 1.61e-05 |
| exon_skip_9442 | 1 | 146739084:146739177:146740440:146740537:146747016:146747072 | 146740440:146740537 | ENST00000467213.1 | PRAD | rs17356233 | chr1:146740502 | C/G | 1.27e-03 |
| exon_skip_9442 | 1 | 146739084:146739177:146740440:146740537:146747016:146747072 | 146740440:146740537 | ENST00000467213.1 | STAD | rs17356233 | chr1:146740502 | C/G | 7.00e-06 |
| exon_skip_9442 | 1 | 146739084:146739177:146740440:146740537:146747016:146747072 | 146740440:146740537 | ENST00000467213.1 | THCA | rs17356233 | chr1:146740502 | C/G | 1.93e-06 |
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Splicing Quantitative Trait Methylation (sQTM) in the skipped exon for CHD1L |
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Survival analysis of Splicing Quantitative Trait Methylation (sQTM) in the skipped exon for CHD1L |
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RelatedDrugs for CHD1L |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for CHD1L |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
| CHD1L | C0236969 | Substance-Related Disorders | 1 | CTD_human |
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