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Center for Computational Systems Medicine
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Gene summary

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Gene structures and expression levels

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Exon skipping events with PSIs in TCGA

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Exon skipping events with PSIs in GTEx

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Open reading frame (ORF) annotation in the exon skipping event

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Exon skipping events in the canonical protein sequence

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SNVs in the skipped exons with depth of coverage

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Splicing Quantitative Trait Loci (sQTLs) in the skipped exons

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Splicing Quantitative Trait Methylation (sQTM) in the skipped exon

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Related drugs with this gene

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Related diseases with this gene

Gene summary for ROCK2

check button Gene summary
Gene informationGene symbol

ROCK2

Gene ID

9475

Gene nameRho associated coiled-coil containing protein kinase 2
SynonymsROCK-II
Cytomap

2p25.1

Type of geneprotein-coding
Descriptionrho-associated protein kinase 2p164 ROCK-2rho-associated, coiled-coil-containing protein kinase II
Modification date20180527
UniProtAcc

O75116

ContextPubMed: ROCK2 [Title/Abstract] AND exon [Title/Abstract] AND skip [Title/Abstract]
- Title (PMID)

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
ROCK2

GO:0006468

protein phosphorylation

18559669


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Exon skipping events across known transcript of Ensembl for ROCK2 from UCSC genome browser

check buttonSkipped exons in TCGA and GTEx based on Ensembl gene isoform structure.
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

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Gene isoform structures and expression levels for ROCK2

check button Expression levels of gene isoforms across TCGA.
gencode gene structure

check button Expression levels of gene isoforms across GTEx.
gencode gene structure


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Exon skipping events with PSIs in TCGA for ROCK2

check button Information of exkip skipping event in TCGA.
Exon skip IDchrExons involved in exon skippingSkipped exonENSGENSTs
exon_skip_337020211332801:11332838:11333904:11333983:11334381:1133447011333904:11333983ENSG00000134318.9ENST00000401753.1,ENST00000493096.1,ENST00000315872.6
exon_skip_337023211338616:11338711:11338806:11338900:11341082:1134126911338806:11338900ENSG00000134318.9ENST00000401753.1,ENST00000315872.6
exon_skip_337024211348412:11348573:11351806:11351966:11354482:1135458911351806:11351966ENSG00000134318.9ENST00000401753.1,ENST00000315872.6
exon_skip_337026211355485:11355538:11355635:11355771:11356283:1135633211355635:11355771ENSG00000134318.9ENST00000401753.1,ENST00000261535.3,ENST00000315872.6
exon_skip_337028211361452:11361483:11362208:11362300:11364447:1136458611362208:11362300ENSG00000134318.9ENST00000431087.1,ENST00000401753.1,ENST00000261535.3,ENST00000315872.6
exon_skip_337030211367379:11367524:11375827:11376088:11389786:1138992411375827:11376088ENSG00000134318.9ENST00000261535.3,ENST00000315872.6
exon_skip_337031211376009:11376088:11389786:11389924:11426664:1142676511389786:11389924ENSG00000134318.9ENST00000462366.1,ENST00000261535.3,ENST00000315872.6

check button PSI values of skipped exons in TCGA.
psi tcga

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Exon skipping events with PSIs in GTEx for ROCK2

check button Information of exkip skipping event in GTEx
Exon skip IDchrExons involved in exon skippingSkipped exonENSGENSTs
exon_skip_337020211332801:11332838:11333904:11333983:11334381:1133447011333904:11333983ENSG00000134318.9ENST00000315872.6,ENST00000401753.1,ENST00000493096.1
exon_skip_337023211338616:11338711:11338806:11338900:11341082:1134126911338806:11338900ENSG00000134318.9ENST00000315872.6,ENST00000401753.1
exon_skip_337024211348412:11348573:11351806:11351966:11354482:1135458911351806:11351966ENSG00000134318.9ENST00000315872.6,ENST00000401753.1
exon_skip_337026211355485:11355538:11355635:11355771:11356283:1135633211355635:11355771ENSG00000134318.9ENST00000315872.6,ENST00000401753.1,ENST00000261535.3
exon_skip_337028211361452:11361483:11362208:11362300:11364447:1136458611362208:11362300ENSG00000134318.9ENST00000315872.6,ENST00000401753.1,ENST00000261535.3,ENST00000431087.1
exon_skip_337030211367379:11367524:11375827:11376088:11389786:1138992411375827:11376088ENSG00000134318.9ENST00000315872.6,ENST00000261535.3
exon_skip_337031211376009:11376088:11389786:11389924:11426664:1142676511389786:11389924ENSG00000134318.9ENST00000315872.6,ENST00000261535.3,ENST00000462366.1

check button PSI values of skipped exons in GTEx.
psi gtex

* Skipped exon sequences.

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Open reading frame (ORF) annotation in the exon skipping event for ROCK2

check button Open reading frame (ORF) of individual exon skipping events in TCGA based on the Ensembl gene structure combined from isoforms.
ENSTStart of skipped exonEnd of skipped exonORF
ENST000003158721133390411333983Frame-shift
ENST000003158721133880611338900Frame-shift
ENST000003158721135180611351966Frame-shift
ENST000003158721135563511355771Frame-shift
ENST000003158721136220811362300Frame-shift
ENST000003158721137582711376088In-frame
ENST000003158721138978611389924In-frame

check button Open reading frame (ORF) of individual exon skipping events in GTEx based on the Ensembl gene structure combined from isoforms.
ENSTStart of skipped exonEnd of skipped exonORF
ENST000003158721133390411333983Frame-shift
ENST000003158721133880611338900Frame-shift
ENST000003158721135180611351966Frame-shift
ENST000003158721135563511355771Frame-shift
ENST000003158721136220811362300Frame-shift
ENST000003158721137582711376088In-frame
ENST000003158721138978611389924In-frame

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Infer the effects of exon skipping event on protein functional features for ROCK2

check button Exon skipping at the protein sequence level and followed lost functional features.
* Click on the image to enlarge it in a new window.
prot feature distribution

check button Loci of skipped exons in TCGA across genomic, transcript, and protein sequence levels of In-frame cases.
ENSTLength of mRNALength of AA seq.Genomic startGenomic endmRNA startmRNA endAA startAA end
ENST00000315872830913881138978611389924774911108154
ENST000003158728309138811375827113760889121172154241

check button Loci of skipped exons in GTEx across genomic, transcript, and protein sequence levels of In-frame cases.
ENSTLength of mRNALength of AA seq.Genomic startGenomic endmRNA startmRNA endAA startAA end
ENST00000315872830913881138978611389924774911108154
ENST000003158728309138811375827113760889121172154241

check button Lost protein functional features of individual exon skipping events in TCGA.
UniProt acc.Start of exon skipping (AA)End of exon skipping (AA)Protein feature start (AA)Protein feature end (AA)Category of protein featureDescription of feature
O75116108154102111Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:4L6Q
O75116108154117124Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:4L6Q
O75116108154121121Binding siteNote=ATP;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00159
O7511610815411388ChainID=PRO_0000086625;Note=Rho-associated protein kinase 2
O7511610815492354DomainNote=Protein kinase;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00159
O75116108154125130HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:4L6Q
O75116108154138146HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:4L6Q
O75116108154112114TurnOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:4L6Q
O75116154241214214Active siteNote=Proton acceptor;Ontology_term=ECO:0000255,ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00159,ECO:0000255|PROSITE-ProRule:PRU10027
O75116154241155160Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:4L6Q
O75116154241162169Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:4L6Q
O75116154241220222Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:4L6Q
O75116154241228230Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:4L6Q
O75116154241241246Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:4L6Q
O7511615424111388ChainID=PRO_0000086625;Note=Rho-associated protein kinase 2
O7511615424192354DomainNote=Protein kinase;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00159
O75116154241177183HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:4L6Q
O75116154241188207HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:4L6Q
O75116154241217219HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:4L6Q


check button Lost protein functional features of individual exon skipping events in GTEx.
UniProt acc.Start of exon skipping (AA)End of exon skipping (AA)Protein feature start (AA)Protein feature end (AA)Category of protein featureDescription of feature
O75116108154102111Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:4L6Q
O75116108154117124Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:4L6Q
O75116108154121121Binding siteNote=ATP;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00159
O7511610815411388ChainID=PRO_0000086625;Note=Rho-associated protein kinase 2
O7511610815492354DomainNote=Protein kinase;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00159
O75116108154125130HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:4L6Q
O75116108154138146HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:4L6Q
O75116108154112114TurnOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:4L6Q
O75116154241214214Active siteNote=Proton acceptor;Ontology_term=ECO:0000255,ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00159,ECO:0000255|PROSITE-ProRule:PRU10027
O75116154241155160Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:4L6Q
O75116154241162169Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:4L6Q
O75116154241220222Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:4L6Q
O75116154241228230Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:4L6Q
O75116154241241246Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:4L6Q
O7511615424111388ChainID=PRO_0000086625;Note=Rho-associated protein kinase 2
O7511615424192354DomainNote=Protein kinase;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00159
O75116154241177183HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:4L6Q
O75116154241188207HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:4L6Q
O75116154241217219HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:4L6Q


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SNVs in the skipped exons for ROCK2

check button - Lollipop plot for presenting exon skipping associated SNVs.
* Click on the image to enlarge it in a new window.
lollipop

check button - Differential PSIs between mutated versus non-mutated samples.

check button - Non-synonymous mutations located in the skipped exons in TCGA.
Cancer typeSampleESIDSkipped exon startSkipped exon endMutation startMutation endMutation typeReference seqMutation seqAAchange
LIHCTCGA-DD-A39Y-01exon_skip_337023
11338807113389001133882011338820Frame_Shift_DelT-p.K997fs
LIHCTCGA-DD-A3A0-01exon_skip_337024
11351807113519661135185411351854Frame_Shift_DelT-p.N719fs
COADTCGA-G4-6588-01exon_skip_337024
11351807113519661135196011351960Frame_Shift_DelT-p.S684fs
READTCGA-EI-6510-01exon_skip_337026
11355636113557711135564711355647Frame_Shift_DelA-p.L529fs
LIHCTCGA-DD-A3A0-01exon_skip_337026
11355636113557711135569811355698Frame_Shift_DelT-p.N512fs
STADTCGA-RD-A8MW-01exon_skip_337028
11362209113623001136217211362219Frame_Shift_DelTGTGATGGAATGAAAATATTTAGGTTTATTGACTTACTTTCTCTTATG-p.364_367del
STADTCGA-F1-A448-01exon_skip_337030
11375828113760881137586411375864Frame_Shift_DelT-p.L230X
KIRCTCGA-CZ-5468-01exon_skip_337031
11389787113899241138980811389814Frame_Shift_DelGGCAAAG-p.146_148del
HNSCTCGA-CV-7095-01exon_skip_337031
11389787113899241138983711389837Frame_Shift_DelA-p.W138fs
STADTCGA-BR-4184-01exon_skip_337031
11389787113899241138983711389837Frame_Shift_DelA-p.W138fs
STADTCGA-BR-8363-01exon_skip_337031
11389787113899241138983711389837Frame_Shift_DelA-p.W138fs
STADTCGA-CG-5723-01exon_skip_337031
11389787113899241138983711389837Frame_Shift_DelA-p.W138fs
UCECTCGA-BS-A0U8-01exon_skip_337031
11389787113899241138983711389837Frame_Shift_DelA-p.W138fs
PRADTCGA-KK-A59V-01exon_skip_337031
11389787113899241138983611389837Frame_Shift_Ins-Ap.G138fs
SKCMTCGA-EE-A3J7-06exon_skip_337031
11389787113899241138983611389837Frame_Shift_Ins-Ap.G138fs
SKCMTCGA-EE-A3J7-06exon_skip_337031
11389787113899241138983611389837Frame_Shift_Ins-Ap.W138fs
STADTCGA-BR-6452-01exon_skip_337031
11389787113899241138983611389837Frame_Shift_Ins-Ap.W138fs
STADTCGA-BR-8360-01exon_skip_337031
11389787113899241138983611389837Frame_Shift_Ins-Ap.W138fs
UCECTCGA-BG-A0M0-01exon_skip_337031
11389787113899241138983611389837Frame_Shift_Ins-Ap.W138fs
UCECTCGA-BG-A0M9-01exon_skip_337031
11389787113899241138983611389837Frame_Shift_Ins-Ap.W138fs
STADTCGA-BR-8360-01exon_skip_337031
11389787113899241138983711389838Frame_Shift_Ins-Ap.W138fs
PCPGTCGA-QR-A70J-01exon_skip_337020
11333905113339831133396711333967Nonsense_MutationGAp.R1209*
SKCMTCGA-3N-A9WC-06exon_skip_337024
11351807113519661135187011351870Nonsense_MutationGAp.R714*
SKCMTCGA-EE-A3JD-06exon_skip_337030
11375828113760881137607311376073Nonsense_MutationGAp.Q160*
SKCMTCGA-EE-A3JD-06exon_skip_337030
11375828113760881137607311376073Nonsense_MutationGAp.Q160X
STADTCGA-BR-8591-01exon_skip_337024
11351807113519661135180511351805Splice_SiteAG.
STADTCGA-BR-8591-01exon_skip_337024
11351807113519661135180511351805Splice_SiteAGp.E735_splice
LUADTCGA-55-7914-01exon_skip_337026
11355636113557711135577311355773Splice_SiteTGp.I488_splice

check button - Depth of coverage in the three exons composing exon skipping event
Depth of coverage in three exonsMutation description

check button - Non-synonymous mutations located in the skipped exons in CCLE.
SampleSkipped exon startSkipped exon endMutation startMutation endMutation typeReference seqMutation seqAAchange
OC316_OVARY11389787113899241138983711389837Frame_Shift_DelA-p.W138fs
SNUC4_LARGE_INTESTINE11389787113899241138983711389837Frame_Shift_DelA-p.W138fs
SNU407_LARGE_INTESTINE11389787113899241138983711389837Frame_Shift_DelA-p.W138fs
LIM1215_LARGE_INTESTINE11389787113899241138983711389837Frame_Shift_DelA-p.W138fs
NCIH630_LARGE_INTESTINE11389787113899241138983711389837Frame_Shift_DelA-p.W138fs
OC314_OVARY11389787113899241138983711389837Frame_Shift_DelA-p.W138fs
CHP126_AUTONOMIC_GANGLIA11355636113557711135565411355655Frame_Shift_Ins-Tp.R527fs
LOVO_LARGE_INTESTINE11389787113899241138983611389837Frame_Shift_Ins-Ap.W138fs
GIMEN_AUTONOMIC_GANGLIA11338807113389001133881111338811Missense_MutationTAp.Q1000H
SNU1040_LARGE_INTESTINE11351807113519661135183611351836Missense_MutationAGp.I725T
IPC298_SKIN11351807113519661135188111351881Missense_MutationGAp.A710V
NUGC3_STOMACH11355636113557711135569311355693Missense_MutationCTp.E514K
SHP77_LUNG11355636113557711135576111355761Missense_MutationCAp.R491L
DU145_PROSTATE11375828113760881137590811375908Missense_MutationCAp.V215L
MDAMB453_BREAST11375828113760881137596211375962Missense_MutationCTp.E197K
GMEL_SKIN11375828113760881137596411375964Missense_MutationGAp.A196V
639V_URINARY_TRACT11375828113760881137597011375970Missense_MutationTCp.Y194C
BT20_BREAST11375828113760881137605511376055Missense_MutationACp.Y166D
TTC442_SOFT_TISSUE11389787113899241138980611389806Missense_MutationTCp.N148S
LB1047RCC_KIDNEY11389787113899241138981611389816Missense_MutationCTp.A145T
SNU81_LARGE_INTESTINE11389787113899241138982511389825Missense_MutationCAp.D142Y
SNU1079_BILIARY_TRACT11389787113899241138990411389904Missense_MutationCGp.Q115H
HEC59_ENDOMETRIUM11389787113899241138992411389924Splice_SiteCTp.V109I

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Splicing Quantitative Trait Loci (sQTL) in the exon skipping event for ROCK2

check button sQTL information located at the skipped exons.
Exon skip IDChromosomeThree exonsSkippped exonENSTCancer typeSNP idLocationDNA change (ref/var)P-value

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Splicing Quantitative Trait Methylation (sQTM) in the skipped exon for ROCK2


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Survival analysis of Splicing Quantitative Trait Methylation (sQTM) in the skipped exon for ROCK2


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RelatedDrugs for ROCK2

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.0 2018-04-02)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status
O75116DB13931NetarsudilRho-associated protein kinase 2small moleculeapproved
O75116DB12010FostamatinibRho-associated protein kinase 2small moleculeapproved|investigational

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RelatedDiseases for ROCK2

check button Diseases associated with this gene.
(DisGeNet 4.0)
GeneDisease IDDisease name# pubmedsSource