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| Open reading frame (ORF) annotation in the exon skipping event |
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| Splicing Quantitative Trait Loci (sQTLs) in the skipped exons |
| Splicing Quantitative Trait Methylation (sQTM) in the skipped exon |
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Gene summary for TAF1D |
 Gene summary |
| Gene information | Gene symbol | TAF1D | Gene ID | 79101 |
| Gene name | TATA-box binding protein associated factor, RNA polymerase I subunit D | |
| Synonyms | JOSD3|RAFI41|TAF(I)41|TAFI41 | |
| Cytomap | 11q21 | |
| Type of gene | protein-coding | |
| Description | TATA box-binding protein-associated factor RNA polymerase I subunit DJosephin domain containing 3RNA polymerase I-specific TBP-associated factor 41 kDaTATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDaTATA box-binding protein | |
| Modification date | 20180523 | |
| UniProtAcc | Q9H5J8 | |
| Context | PubMed: TAF1D [Title/Abstract] AND exon [Title/Abstract] AND skip [Title/Abstract] - Title (PMID) |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
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Exon skipping events across known transcript of Ensembl for TAF1D from UCSC genome browser |
| Skipped exons in TCGA and GTEx based on Ensembl gene isoform structure. * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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Gene isoform structures and expression levels for TAF1D |
| Expression levels of gene isoforms across TCGA. |
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| Expression levels of gene isoforms across GTEx. |
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Exon skipping events with PSIs in TCGA for TAF1D |
| Information of exkip skipping event in TCGA. |
| Exon skip ID | chr | Exons involved in exon skipping | Skipped exon | ENSG | ENSTs |
| exon_skip_76773 | 11 | 93463519:93463613:93463842:93463878:93464315:93464382 | 93463842:93463878 | ENSG00000166012.10 | ENST00000525928.1,ENST00000546088.1,ENST00000529435.1,ENST00000526015.1,ENST00000534079.1,ENST00000393259.2 |
| exon_skip_76797 | 11 | 93463847:93463878:93464315:93464382:93464918:93464965 | 93464315:93464382 | ENSG00000166012.10 | ENST00000525928.1,ENST00000546088.1,ENST00000529435.1,ENST00000526015.1,ENST00000540232.1,ENST00000534079.1,ENST00000393259.2 |
| exon_skip_76818 | 11 | 93464326:93464382:93464918:93464965:93465409:93465457 | 93464918:93464965 | ENSG00000166012.10 | ENST00000525928.1,ENST00000546088.1,ENST00000529435.1,ENST00000530769.1,ENST00000526015.1,ENST00000540232.1,ENST00000534079.1,ENST00000527169.1,ENST00000323981.2,ENST00000530089.2,ENST00000393259.2 |
| exon_skip_76821 | 11 | 93465437:93465457:93466252:93466287:93466515:93466563 | 93466252:93466287 | ENSG00000166012.10 | ENST00000525928.1,ENST00000546088.1,ENST00000529435.1,ENST00000526015.1,ENST00000323981.2,ENST00000530089.2,ENST00000393259.2 |
| exon_skip_76854 | 11 | 93466252:93466287:93466515:93466563:93467790:93467826 | 93466515:93466563 | ENSG00000166012.10 | ENST00000540232.1,ENST00000527169.1,ENST00000323981.2,ENST00000533794.1,ENST00000393259.2 |
| exon_skip_76855 | 11 | 93466252:93466287:93466515:93466585:93467790:93467826 | 93466515:93466585 | ENSG00000166012.10 | ENST00000546088.1,ENST00000529435.1 |
| exon_skip_76856 | 11 | 93466252:93466287:93466515:93466671:93467790:93467826 | 93466515:93466671 | ENSG00000166012.10 | ENST00000526015.1 |
| exon_skip_76860 | 11 | 93466515:93466563:93467790:93467826:93469306:93469405 | 93467790:93467826 | ENSG00000166012.10 | ENST00000529794.1,ENST00000540232.1,ENST00000527068.1,ENST00000323981.2,ENST00000533794.1 |
| exon_skip_76861 | 11 | 93466515:93466563:93467790:93467826:93469455:93469470 | 93467790:93467826 | ENSG00000166012.10 | ENST00000393259.2 |
| exon_skip_76862 | 11 | 93466515:93466563:93467790:93467826:93470229:93470405 | 93467790:93467826 | ENSG00000166012.10 | ENST00000527169.1 |
| exon_skip_76873 | 11 | 93467790:93467826:93469306:93469470:93469859:93469907 | 93469306:93469470 | ENSG00000166012.10 | ENST00000526015.1,ENST00000527068.1,ENST00000323981.2 |
| exon_skip_76880 | 11 | 93467790:93467826:93469455:93469470:93469859:93469907 | 93469455:93469470 | ENSG00000166012.10 | ENST00000393259.2 |
| exon_skip_76887 | 11 | 93469455:93469470:93469859:93469917:93470229:93470405 | 93469859:93469917 | ENSG00000166012.10 | ENST00000448108.2,ENST00000526015.1,ENST00000323981.2 |
| exon_skip_76890 | 11 | 93470321:93470405:93471274:93471606:93472402:93472497 | 93471274:93471606 | ENSG00000166012.10 | ENST00000534770.1 |
| exon_skip_76892 | 11 | 93470321:93470405:93471274:93471665:93472402:93472497 | 93471274:93471665 | ENSG00000166012.10 | ENST00000448108.2,ENST00000526015.1,ENST00000527169.1,ENST00000323981.2 |
| exon_skip_76893 | 11 | 93471274:93471665:93472402:93472497:93474487:93474642 | 93472402:93472497 | ENSG00000166012.10 | ENST00000448108.2,ENST00000526015.1,ENST00000527169.1 |
| PSI values of skipped exons in TCGA. |
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Exon skipping events with PSIs in GTEx for TAF1D |
| Information of exkip skipping event in GTEx |
| Exon skip ID | chr | Exons involved in exon skipping | Skipped exon | ENSG | ENSTs |
| exon_skip_76773 | 11 | 93463519:93463613:93463842:93463878:93464315:93464382 | 93463842:93463878 | ENSG00000166012.10 | ENST00000526015.1,ENST00000534079.1,ENST00000546088.1,ENST00000393259.2,ENST00000525928.1,ENST00000529435.1 |
| exon_skip_76797 | 11 | 93463847:93463878:93464315:93464382:93464918:93464965 | 93464315:93464382 | ENSG00000166012.10 | ENST00000526015.1,ENST00000534079.1,ENST00000546088.1,ENST00000393259.2,ENST00000525928.1,ENST00000529435.1,ENST00000540232.1 |
| exon_skip_76818 | 11 | 93464326:93464382:93464918:93464965:93465409:93465457 | 93464918:93464965 | ENSG00000166012.10 | ENST00000323981.2,ENST00000526015.1,ENST00000534079.1,ENST00000546088.1,ENST00000393259.2,ENST00000530769.1,ENST00000525928.1,ENST00000529435.1,ENST00000540232.1,ENST00000527169.1,ENST00000530089.2 |
| exon_skip_76821 | 11 | 93465437:93465457:93466252:93466287:93466515:93466563 | 93466252:93466287 | ENSG00000166012.10 | ENST00000323981.2,ENST00000526015.1,ENST00000546088.1,ENST00000393259.2,ENST00000525928.1,ENST00000529435.1,ENST00000530089.2 |
| exon_skip_76854 | 11 | 93466252:93466287:93466515:93466563:93467790:93467826 | 93466515:93466563 | ENSG00000166012.10 | ENST00000323981.2,ENST00000393259.2,ENST00000540232.1,ENST00000527169.1,ENST00000533794.1 |
| exon_skip_76855 | 11 | 93466252:93466287:93466515:93466585:93467790:93467826 | 93466515:93466585 | ENSG00000166012.10 | ENST00000546088.1,ENST00000529435.1 |
| exon_skip_76856 | 11 | 93466252:93466287:93466515:93466671:93467790:93467826 | 93466515:93466671 | ENSG00000166012.10 | ENST00000526015.1 |
| exon_skip_76860 | 11 | 93466515:93466563:93467790:93467826:93469306:93469405 | 93467790:93467826 | ENSG00000166012.10 | ENST00000323981.2,ENST00000540232.1,ENST00000533794.1,ENST00000529794.1,ENST00000527068.1 |
| exon_skip_76861 | 11 | 93466515:93466563:93467790:93467826:93469455:93469470 | 93467790:93467826 | ENSG00000166012.10 | ENST00000393259.2 |
| exon_skip_76862 | 11 | 93466515:93466563:93467790:93467826:93470229:93470405 | 93467790:93467826 | ENSG00000166012.10 | ENST00000527169.1 |
| exon_skip_76873 | 11 | 93467790:93467826:93469306:93469470:93469859:93469907 | 93469306:93469470 | ENSG00000166012.10 | ENST00000323981.2,ENST00000526015.1,ENST00000527068.1 |
| exon_skip_76880 | 11 | 93467790:93467826:93469455:93469470:93469859:93469907 | 93469455:93469470 | ENSG00000166012.10 | ENST00000393259.2 |
| exon_skip_76887 | 11 | 93469455:93469470:93469859:93469917:93470229:93470405 | 93469859:93469917 | ENSG00000166012.10 | ENST00000323981.2,ENST00000526015.1,ENST00000448108.2 |
| exon_skip_76890 | 11 | 93470321:93470405:93471274:93471606:93472402:93472497 | 93471274:93471606 | ENSG00000166012.10 | ENST00000534770.1 |
| exon_skip_76892 | 11 | 93470321:93470405:93471274:93471665:93472402:93472497 | 93471274:93471665 | ENSG00000166012.10 | ENST00000323981.2,ENST00000526015.1,ENST00000527169.1,ENST00000448108.2 |
| exon_skip_76893 | 11 | 93471274:93471665:93472402:93472497:93474487:93474642 | 93472402:93472497 | ENSG00000166012.10 | ENST00000526015.1,ENST00000527169.1,ENST00000448108.2 |
| exon_skip_76895 | 11 | 93472446:93472497:93475868:93476064:93517469:93517557 | 93475868:93476064 | ENSG00000166012.10 | ENST00000527690.1 |
| PSI values of skipped exons in GTEx. |
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| * Skipped exon sequences. |
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Open reading frame (ORF) annotation in the exon skipping event for TAF1D |
| Open reading frame (ORF) of individual exon skipping events in TCGA based on the Ensembl gene structure combined from isoforms. |
| ENST | Start of skipped exon | End of skipped exon | ORF |
| ENST00000448108 | 93472402 | 93472497 | 3UTR-3CDS |
| ENST00000448108 | 93469859 | 93469917 | Frame-shift |
| ENST00000448108 | 93471274 | 93471665 | Frame-shift |
| Open reading frame (ORF) of individual exon skipping events in GTEx based on the Ensembl gene structure combined from isoforms. |
| ENST | Start of skipped exon | End of skipped exon | ORF |
| ENST00000448108 | 93472402 | 93472497 | 3UTR-3CDS |
| ENST00000448108 | 93469859 | 93469917 | Frame-shift |
| ENST00000448108 | 93471274 | 93471665 | Frame-shift |
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Infer the effects of exon skipping event on protein functional features for TAF1D |
| Exon skipping at the protein sequence level and followed lost functional features. * Click on the image to enlarge it in a new window. |
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| Loci of skipped exons in TCGA across genomic, transcript, and protein sequence levels of In-frame cases. |
| ENST | Length of mRNA | Length of AA seq. | Genomic start | Genomic end | mRNA start | mRNA end | AA start | AA end |
| Loci of skipped exons in GTEx across genomic, transcript, and protein sequence levels of In-frame cases. |
| ENST | Length of mRNA | Length of AA seq. | Genomic start | Genomic end | mRNA start | mRNA end | AA start | AA end |
| Lost protein functional features of individual exon skipping events in TCGA. |
| UniProt acc. | Start of exon skipping (AA) | End of exon skipping (AA) | Protein feature start (AA) | Protein feature end (AA) | Category of protein feature | Description of feature |
| Lost protein functional features of individual exon skipping events in GTEx. |
| UniProt acc. | Start of exon skipping (AA) | End of exon skipping (AA) | Protein feature start (AA) | Protein feature end (AA) | Category of protein feature | Description of feature |
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SNVs in the skipped exons for TAF1D |
| - Lollipop plot for presenting exon skipping associated SNVs. * Click on the image to enlarge it in a new window. |
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| - Differential PSIs between mutated versus non-mutated samples. |
TAF1D_STAD_exon_skip_76873_psi_boxplot.png |
| - Non-synonymous mutations located in the skipped exons in TCGA. |
| Cancer type | Sample | ESID | Skipped exon start | Skipped exon end | Mutation start | Mutation end | Mutation type | Reference seq | Mutation seq | AAchange |
| LIHC | TCGA-DD-A3A0-01 | exon_skip_76873 | 93469307 | 93469470 | 93469355 | 93469355 | Frame_Shift_Del | T | - | p.N270fs |
| LUAD | TCGA-69-8253-01 | exon_skip_76890 | 93471275 | 93471606 | 93471306 | 93471306 | Frame_Shift_Del | T | - | p.N143fs |
| LUAD | TCGA-69-8253-01 | exon_skip_76892 | 93471275 | 93471665 | 93471306 | 93471306 | Frame_Shift_Del | T | - | p.N143fs |
| LIHC | TCGA-G3-A3CJ-01 | exon_skip_76890 | 93471275 | 93471606 | 93471398 | 93471398 | Frame_Shift_Del | C | - | p.R113fs |
| LIHC | TCGA-G3-A3CJ-01 | exon_skip_76892 | 93471275 | 93471665 | 93471398 | 93471398 | Frame_Shift_Del | C | - | p.R113fs |
| KICH | TCGA-KL-8338-01 | exon_skip_76890 | 93471275 | 93471606 | 93471453 | 93471453 | Frame_Shift_Del | T | - | p.K94fs |
| KICH | TCGA-KL-8338-01 | exon_skip_76892 | 93471275 | 93471665 | 93471453 | 93471453 | Frame_Shift_Del | T | - | p.K94fs |
| LIHC | TCGA-G3-A3CK-01 | exon_skip_76890 | 93471275 | 93471606 | 93471453 | 93471453 | Frame_Shift_Del | T | - | p.K96fs |
| LIHC | TCGA-G3-A3CK-01 | exon_skip_76892 | 93471275 | 93471665 | 93471453 | 93471453 | Frame_Shift_Del | T | - | p.K96fs |
| PRAD | TCGA-EJ-7782-01 | exon_skip_76890 | 93471275 | 93471606 | 93471453 | 93471453 | Frame_Shift_Del | T | - | p.K96fs |
| PRAD | TCGA-EJ-7782-01 | exon_skip_76892 | 93471275 | 93471665 | 93471453 | 93471453 | Frame_Shift_Del | T | - | p.K96fs |
| STAD | TCGA-CG-5721-01 | exon_skip_76890 | 93471275 | 93471606 | 93471453 | 93471453 | Frame_Shift_Del | T | - | p.K94fs |
| STAD | TCGA-CG-5721-01 | exon_skip_76892 | 93471275 | 93471665 | 93471453 | 93471453 | Frame_Shift_Del | T | - | p.K94fs |
| STAD | TCGA-D7-A4YY-01 | exon_skip_76890 | 93471275 | 93471606 | 93471453 | 93471453 | Frame_Shift_Del | T | - | p.K94fs |
| STAD | TCGA-D7-A4YY-01 | exon_skip_76892 | 93471275 | 93471665 | 93471453 | 93471453 | Frame_Shift_Del | T | - | p.K94fs |
| LIHC | TCGA-DD-A3A0-01 | exon_skip_76890 | 93471275 | 93471606 | 93471491 | 93471491 | Frame_Shift_Del | A | - | p.F81fs |
| LIHC | TCGA-DD-A3A0-01 | exon_skip_76892 | 93471275 | 93471665 | 93471491 | 93471491 | Frame_Shift_Del | A | - | p.F81fs |
| LIHC | TCGA-DD-A39Y-01 | exon_skip_76890 | 93471275 | 93471606 | 93471604 | 93471604 | Frame_Shift_Del | C | - | p.E44fs |
| LIHC | TCGA-DD-A39Y-01 | exon_skip_76892 | 93471275 | 93471665 | 93471604 | 93471604 | Frame_Shift_Del | C | - | p.E44fs |
| COAD | TCGA-A6-5665-01 | exon_skip_76890 | 93471275 | 93471606 | 93471452 | 93471453 | Frame_Shift_Ins | - | T | p.K94fs |
| COAD | TCGA-A6-5665-01 | exon_skip_76892 | 93471275 | 93471665 | 93471452 | 93471453 | Frame_Shift_Ins | - | T | p.K94fs |
| ESCA | TCGA-M9-A5M8-01 | exon_skip_76890 | 93471275 | 93471606 | 93471452 | 93471453 | Frame_Shift_Ins | - | T | p.K94fs |
| ESCA | TCGA-M9-A5M8-01 | exon_skip_76890 | 93471275 | 93471606 | 93471452 | 93471453 | Frame_Shift_Ins | - | T | p.K95fs |
| ESCA | TCGA-M9-A5M8-01 | exon_skip_76892 | 93471275 | 93471665 | 93471452 | 93471453 | Frame_Shift_Ins | - | T | p.K94fs |
| ESCA | TCGA-M9-A5M8-01 | exon_skip_76892 | 93471275 | 93471665 | 93471452 | 93471453 | Frame_Shift_Ins | - | T | p.K95fs |
| UCEC | TCGA-BK-A0C9-01 | exon_skip_76890 | 93471275 | 93471606 | 93471452 | 93471453 | Frame_Shift_Ins | - | T | p.K94fs |
| UCEC | TCGA-BK-A0C9-01 | exon_skip_76892 | 93471275 | 93471665 | 93471452 | 93471453 | Frame_Shift_Ins | - | T | p.K94fs |
| STAD | TCGA-CG-4437-01 | exon_skip_76873 | 93469307 | 93469470 | 93469380 | 93469380 | Nonsense_Mutation | T | A | p.K262* |
| STAD | TCGA-CG-4437-01 | exon_skip_76873 | 93469307 | 93469470 | 93469380 | 93469380 | Nonsense_Mutation | T | A | p.K262X |
| PRAD | TCGA-VN-A88O-01 | exon_skip_76890 | 93471275 | 93471606 | 93471313 | 93471313 | Nonsense_Mutation | C | A | p.E141* |
| PRAD | TCGA-VN-A88O-01 | exon_skip_76892 | 93471275 | 93471665 | 93471313 | 93471313 | Nonsense_Mutation | C | A | p.E141* |
| BLCA | TCGA-FD-A3NA-01 | exon_skip_76890 | 93471275 | 93471606 | 93471531 | 93471531 | Nonsense_Mutation | G | T | p.S68* |
| BLCA | TCGA-FD-A3NA-01 | exon_skip_76892 | 93471275 | 93471665 | 93471531 | 93471531 | Nonsense_Mutation | G | T | p.S68* |
| UCEC | TCGA-BS-A0UV-01 | exon_skip_76890 | 93471275 | 93471606 | 93471597 | 93471597 | Nonsense_Mutation | C | A | p.E32* |
| UCEC | TCGA-BS-A0UV-01 | exon_skip_76892 | 93471275 | 93471665 | 93471597 | 93471597 | Nonsense_Mutation | C | A | p.E32* |
| ESCA | TCGA-VR-AA7B-01 | exon_skip_76887 | 93469860 | 93469917 | 93469859 | 93469859 | Splice_Site | C | G | . |
| ESCA | TCGA-VR-AA7B-01 | exon_skip_76887 | 93469860 | 93469917 | 93469859 | 93469859 | Splice_Site | C | G | e4+1 |
| - Depth of coverage in the three exons composing exon skipping event |
| Depth of coverage in three exons | Mutation description |
 | Sample: TCGA-CG-4437-01 |
| Cancer type: STAD | |
| ESID: exon_skip_76873 | |
| Skipped exon start: 93469307 | |
| Skipped exon end: 93469470 | |
| Mutation start: 93469380 | |
| Mutation end: 93469380 | |
| Mutation type: Nonsense_Mutation | |
| Reference seq: T | |
| Mutation seq: A | |
| AAchange: p.K262X | |
| Sample: TCGA-CG-4437-01 |
| Cancer type: STAD | |
| ESID: exon_skip_76873 | |
| Skipped exon start: 93469307 | |
| Skipped exon end: 93469470 | |
| Mutation start: 93469380 | |
| Mutation end: 93469380 | |
| Mutation type: Nonsense_Mutation | |
| Reference seq: T | |
| Mutation seq: A | |
| AAchange: p.K262* | |
exon_skip_335109_STAD_TCGA-CG-4437-01.png | |
exon_skip_335111_STAD_TCGA-CG-4437-01.png | |
exon_skip_388061_STAD_TCGA-CG-4437-01.png | |
exon_skip_388063_STAD_TCGA-CG-4437-01.png | |
exon_skip_388064_STAD_TCGA-CG-4437-01.png | |
exon_skip_388065_STAD_TCGA-CG-4437-01.png | |
exon_skip_388066_STAD_TCGA-CG-4437-01.png | |
exon_skip_76873_STAD_TCGA-CG-4437-01.png | |
| - Non-synonymous mutations located in the skipped exons in CCLE. |
| Sample | Skipped exon start | Skipped exon end | Mutation start | Mutation end | Mutation type | Reference seq | Mutation seq | AAchange |
| HEC265_ENDOMETRIUM | 93471275 | 93471606 | 93471453 | 93471453 | Frame_Shift_Del | T | - | p.K96fs |
| HEC265_ENDOMETRIUM | 93471275 | 93471665 | 93471453 | 93471453 | Frame_Shift_Del | T | - | p.K96fs |
| CAL51_BREAST | 93471275 | 93471606 | 93471453 | 93471453 | Frame_Shift_Del | T | - | p.K96fs |
| CAL51_BREAST | 93471275 | 93471665 | 93471453 | 93471453 | Frame_Shift_Del | T | - | p.K96fs |
| EN_ENDOMETRIUM | 93471275 | 93471606 | 93471453 | 93471453 | Frame_Shift_Del | T | - | p.K96fs |
| EN_ENDOMETRIUM | 93471275 | 93471665 | 93471453 | 93471453 | Frame_Shift_Del | T | - | p.K96fs |
| FARAGE_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 93471275 | 93471606 | 93471453 | 93471453 | Frame_Shift_Del | T | - | p.K96fs |
| FARAGE_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 93471275 | 93471665 | 93471453 | 93471453 | Frame_Shift_Del | T | - | p.K96fs |
| KE97_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 93471275 | 93471606 | 93471464 | 93471465 | Frame_Shift_Del | TC | - | p.R90fs |
| KE97_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 93471275 | 93471665 | 93471464 | 93471465 | Frame_Shift_Del | TC | - | p.R90fs |
| NCIH630_LARGE_INTESTINE | 93471275 | 93471606 | 93471305 | 93471306 | Frame_Shift_Ins | - | T | p.N143fs |
| NCIH630_LARGE_INTESTINE | 93471275 | 93471665 | 93471305 | 93471306 | Frame_Shift_Ins | - | T | p.N143fs |
| NCIH1573_LUNG | 93469307 | 93469470 | 93469382 | 93469382 | Missense_Mutation | G | A | p.S261F |
| SNUC5_LARGE_INTESTINE | 93469307 | 93469470 | 93469424 | 93469424 | Missense_Mutation | A | G | p.V247A |
| SNU398_LIVER | 93469860 | 93469917 | 93469868 | 93469868 | Missense_Mutation | T | G | p.K229Q |
| SNUC2A_LARGE_INTESTINE | 93471275 | 93471606 | 93471304 | 93471304 | Missense_Mutation | C | T | p.A144T |
| SNUC2A_LARGE_INTESTINE | 93471275 | 93471665 | 93471304 | 93471304 | Missense_Mutation | C | T | p.A144T |
| KARPAS45_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 93471275 | 93471606 | 93471304 | 93471304 | Missense_Mutation | C | T | p.A144T |
| KARPAS45_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 93471275 | 93471665 | 93471304 | 93471304 | Missense_Mutation | C | T | p.A144T |
| SNUC2B_LARGE_INTESTINE | 93471275 | 93471606 | 93471304 | 93471304 | Missense_Mutation | C | T | p.A144T |
| SNUC2B_LARGE_INTESTINE | 93471275 | 93471665 | 93471304 | 93471304 | Missense_Mutation | C | T | p.A144T |
| LB647PBL_MATCHED_NORMAL_TISSUE | 93471275 | 93471606 | 93471304 | 93471304 | Missense_Mutation | C | T | p.A144T |
| LB647PBL_MATCHED_NORMAL_TISSUE | 93471275 | 93471665 | 93471304 | 93471304 | Missense_Mutation | C | T | p.A144T |
| LB647SCLC_LUNG | 93471275 | 93471606 | 93471304 | 93471304 | Missense_Mutation | C | T | p.A144T |
| LB647SCLC_LUNG | 93471275 | 93471665 | 93471304 | 93471304 | Missense_Mutation | C | T | p.A144T |
| NCIH847_LUNG | 93471275 | 93471606 | 93471414 | 93471414 | Missense_Mutation | C | A | p.G107V |
| NCIH847_LUNG | 93471275 | 93471665 | 93471414 | 93471414 | Missense_Mutation | C | A | p.G107V |
| EN_ENDOMETRIUM | 93471275 | 93471606 | 93471477 | 93471477 | Missense_Mutation | T | A | p.N86I |
| EN_ENDOMETRIUM | 93471275 | 93471665 | 93471477 | 93471477 | Missense_Mutation | T | A | p.N86I |
| OVK18_OVARY | 93471275 | 93471606 | 93471544 | 93471544 | Missense_Mutation | A | G | p.S64P |
| OVK18_OVARY | 93471275 | 93471665 | 93471544 | 93471544 | Missense_Mutation | A | G | p.S64P |
| JEG3_PLACENTA | 93471275 | 93471606 | 93471568 | 93471568 | Missense_Mutation | G | A | p.P56S |
| JEG3_PLACENTA | 93471275 | 93471665 | 93471568 | 93471568 | Missense_Mutation | G | A | p.P56S |
| HCC1395_MATCHED_NORMAL_TISSUE | 93471275 | 93471606 | 93471579 | 93471579 | Missense_Mutation | A | C | p.F52C |
| HCC1395_MATCHED_NORMAL_TISSUE | 93471275 | 93471665 | 93471579 | 93471579 | Missense_Mutation | A | C | p.F52C |
| ETK1_BILIARY_TRACT | 93472403 | 93472497 | 93472460 | 93472460 | Missense_Mutation | G | A | p.S4L |
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Splicing Quantitative Trait Loci (sQTL) in the exon skipping event for TAF1D |
| sQTL information located at the skipped exons. |
| Exon skip ID | Chromosome | Three exons | Skippped exon | ENST | Cancer type | SNP id | Location | DNA change (ref/var) | P-value |
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Splicing Quantitative Trait Methylation (sQTM) in the skipped exon for TAF1D |
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Survival analysis of Splicing Quantitative Trait Methylation (sQTM) in the skipped exon for TAF1D |
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RelatedDrugs for TAF1D |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for TAF1D |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
| TAF1D | C0037274 | Dermatologic disorders | 1 | CTD_human |
| TAF1D | C0311375 | Arsenic Poisoning | 1 | CTD_human |
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