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Center for Computational Systems Medicine
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Gene summary

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Gene structures and expression levels

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Exon skipping events with PSIs in TCGA

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Exon skipping events with PSIs in GTEx

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Open reading frame (ORF) annotation in the exon skipping event

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Exon skipping events in the canonical protein sequence

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SNVs in the skipped exons with depth of coverage

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Splicing Quantitative Trait Loci (sQTLs) in the skipped exons

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Splicing Quantitative Trait Methylation (sQTM) in the skipped exon

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Related drugs with this gene

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Related diseases with this gene

Gene summary for WARS

check button Gene summary
Gene informationGene symbol

WARS

Gene ID

7453

Gene nametryptophanyl-tRNA synthetase
SynonymsGAMMA-2|HMN9|IFI53|IFP53
Cytomap

14q32.2

Type of geneprotein-coding
Descriptiontryptophan--tRNA ligase, cytoplasmichWRSinterferon-induced protein 53trpRStryptophan tRNA ligase 1, cytoplasmic
Modification date20180523
UniProtAcc

P23381

ContextPubMed: WARS [Title/Abstract] AND exon [Title/Abstract] AND skip [Title/Abstract]
- Title (PMID)

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
WARS

GO:0001933

negative regulation of protein phosphorylation

22504299

WARS

GO:0006469

negative regulation of protein kinase activity

22504299

WARS

GO:0010628

positive regulation of gene expression

22504299

WARS

GO:0010835

regulation of protein ADP-ribosylation

22504299

WARS

GO:0045765

regulation of angiogenesis

11773625|11773626


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Exon skipping events across known transcript of Ensembl for WARS from UCSC genome browser

check buttonSkipped exons in TCGA and GTEx based on Ensembl gene isoform structure.
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

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Gene isoform structures and expression levels for WARS

check button Expression levels of gene isoforms across TCGA.
gencode gene structure

check button Expression levels of gene isoforms across GTEx.
gencode gene structure


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Exon skipping events with PSIs in TCGA for WARS

check button Information of exkip skipping event in TCGA.
Exon skip IDchrExons involved in exon skippingSkipped exonENSGENSTs
exon_skip_11583014100801263:100801373:100803398:100803539:100808734:100808815100803398:100803539ENSG00000140105.13ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1
exon_skip_11583514100803398:100803539:100808734:100808908:100809611:100809724100808734:100808908ENSG00000140105.13ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1
exon_skip_11583914100809611:100809724:100813082:100813183:100820023:100820206100813082:100813183ENSG00000140105.13ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1
exon_skip_11584814100820164:100820206:100820783:100820903:100826890:100826999100820783:100820903ENSG00000140105.13ENST00000556504.1,ENST00000392882.2,ENST00000557722.1,ENST00000556645.1,ENST00000358655.4,ENST00000554084.1,ENST00000355338.2,ENST00000556435.1,ENST00000553395.1,ENST00000344102.5,ENST00000557135.1,ENST00000557297.1
exon_skip_11585114100820896:100820903:100826890:100826999:100828044:100828239100826890:100826999ENSG00000140105.13ENST00000553808.1,ENST00000556504.1,ENST00000554331.1,ENST00000392882.2,ENST00000556698.1,ENST00000557722.1,ENST00000555063.1,ENST00000556645.1,ENST00000358655.4,ENST00000554084.1,ENST00000555410.1,ENST00000355338.2,ENST00000556435.1,ENST00000556338.1,ENS
exon_skip_11585314100820896:100820903:100828044:100828258:100835423:100835558100828044:100828258ENSG00000140105.13ENST00000557239.1
exon_skip_11588314100828192:100828258:100831811:100831913:100835423:100835558100831811:100831913ENSG00000140105.13ENST00000554509.1,ENST00000555410.1
exon_skip_11588414100828192:100828258:100832290:100832404:100835423:100835558100832290:100832404ENSG00000140105.13ENST00000556783.1
exon_skip_11588614100828192:100828258:100834710:100834802:100835423:100835558100834710:100834802ENSG00000140105.13ENST00000557347.1
exon_skip_11589114100828192:100828258:100835423:100835595:100840316:100840401100835423:100835595ENSG00000140105.13ENST00000557722.1,ENST00000556295.1
exon_skip_11589214100828192:100828258:100835423:100835595:100840472:100840486100835423:100835595ENSG00000140105.13ENST00000556695.1,ENST00000556698.1,ENST00000556209.1,ENST00000554820.1,ENST00000554605.1,ENST00000555813.1,ENST00000557135.1,ENST00000553545.1,ENST00000555031.1,ENST00000553524.1
exon_skip_11589314100828192:100828258:100835423:100835595:100841619:100841670100835423:100835595ENSG00000140105.13ENST00000553769.2,ENST00000553808.1,ENST00000554772.1,ENST00000557094.1,ENST00000553413.1
exon_skip_11589514100828192:100828258:100835423:100835595:100842596:100842622100835423:100835595ENSG00000140105.13ENST00000556579.1,ENST00000554331.1,ENST00000557239.1,ENST00000355338.2
exon_skip_11591414100828192:100828258:100841619:100841687:100841847:100841944100841619:100841687ENSG00000140105.13ENST00000556645.1
exon_skip_11591814100828192:100828258:100841619:100841743:100842596:100842622100841619:100841743ENSG00000140105.13ENST00000556504.1
exon_skip_11593514100835456:100835595:100840316:100840401:100841619:100841670100840316:100840401ENSG00000140105.13ENST00000556295.1
exon_skip_11593614100835456:100835595:100840316:100840401:100842596:100842622100840316:100840401ENSG00000140105.13ENST00000557722.1
exon_skip_11593714100835456:100835595:100840472:100840486:100841619:100841670100840472:100840486ENSG00000140105.13ENST00000554820.1
exon_skip_11593914100835456:100835595:100840472:100840516:100841619:100841670100840472:100840516ENSG00000140105.13ENST00000556698.1
exon_skip_11594014100835456:100835595:100840472:100840557:100841619:100841670100840472:100840557ENSG00000140105.13ENST00000555813.1
exon_skip_11594114100835456:100835595:100840472:100840581:100841619:100841670100840472:100840581ENSG00000140105.13ENST00000553581.1,ENST00000554509.1,ENST00000554605.1,ENST00000555031.1
exon_skip_11594314100835456:100835595:100840472:100840581:100842596:100842622100840472:100840581ENSG00000140105.13ENST00000553524.1
exon_skip_11594414100835456:100835595:100840472:100840602:100841619:100841670100840472:100840602ENSG00000140105.13ENST00000556209.1,ENST00000557135.1,ENST00000557297.1
exon_skip_11594514100835445:100835595:100840472:100840602:100841847:100841944100840472:100840602ENSG00000140105.13ENST00000553545.1
exon_skip_11594914100835456:100835595:100841619:100841687:100842596:100842622100841619:100841687ENSG00000140105.13ENST00000554772.1
exon_skip_11595014100835456:100835595:100841619:100841740:100842596:100842622100841619:100841740ENSG00000140105.13ENST00000553413.1
exon_skip_11595114100835445:100835595:100841619:100841743:100841847:100841944100841619:100841743ENSG00000140105.13ENST00000553934.1
exon_skip_11595214100835456:100835595:100841619:100841743:100842596:100842622100841619:100841743ENSG00000140105.13ENST00000553769.2
exon_skip_11597414100840472:100840581:100841619:100841743:100842596:100842622100841619:100841743ENSG00000140105.13ENST00000554605.1
exon_skip_11597514100840472:100840581:100841619:100841883:100842596:100842622100841619:100841883ENSG00000140105.13ENST00000553581.1
exon_skip_11598014100840472:100840602:100841619:100841743:100842596:100842622100841619:100841743ENSG00000140105.13ENST00000556209.1

check button PSI values of skipped exons in TCGA.
psi tcga

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Exon skipping events with PSIs in GTEx for WARS

check button Information of exkip skipping event in GTEx
Exon skip IDchrExons involved in exon skippingSkipped exonENSGENSTs
exon_skip_11583014100801263:100801373:100803398:100803539:100808734:100808815100803398:100803539ENSG00000140105.13ENST00000392882.2,ENST00000358655.4,ENST00000355338.2,ENST00000344102.5,ENST00000557135.1,ENST00000556645.1,ENST00000554950.1
exon_skip_11583514100803398:100803539:100808734:100808908:100809611:100809724100808734:100808908ENSG00000140105.13ENST00000392882.2,ENST00000358655.4,ENST00000355338.2,ENST00000344102.5,ENST00000557135.1,ENST00000556645.1,ENST00000554950.1
exon_skip_11583914100809611:100809724:100813082:100813183:100820023:100820206100813082:100813183ENSG00000140105.13ENST00000392882.2,ENST00000358655.4,ENST00000355338.2,ENST00000344102.5,ENST00000557135.1,ENST00000556645.1,ENST00000554950.1
exon_skip_11584814100820164:100820206:100820783:100820903:100826890:100826999100820783:100820903ENSG00000140105.13ENST00000392882.2,ENST00000358655.4,ENST00000355338.2,ENST00000344102.5,ENST00000557135.1,ENST00000556645.1,ENST00000553395.1,ENST00000556504.1,ENST00000554084.1,ENST00000557722.1,ENST00000557297.1,ENST00000556435.1
exon_skip_11585114100820896:100820903:100826890:100826999:100828044:100828239100826890:100826999ENSG00000140105.13ENST00000392882.2,ENST00000358655.4,ENST00000355338.2,ENST00000344102.5,ENST00000557135.1,ENST00000556645.1,ENST00000553395.1,ENST00000556504.1,ENST00000554084.1,ENST00000557722.1,ENST00000557297.1,ENST00000556435.1,ENST00000553808.1,ENST00000554331.1,ENS
exon_skip_11585314100820896:100820903:100828044:100828258:100835423:100835558100828044:100828258ENSG00000140105.13ENST00000557239.1
exon_skip_11588314100828192:100828258:100831811:100831913:100835423:100835558100831811:100831913ENSG00000140105.13ENST00000555410.1,ENST00000554509.1
exon_skip_11588414100828192:100828258:100832290:100832404:100835423:100835558100832290:100832404ENSG00000140105.13ENST00000556783.1
exon_skip_11588614100828192:100828258:100834710:100834802:100835423:100835558100834710:100834802ENSG00000140105.13ENST00000557347.1
exon_skip_11589114100828192:100828258:100835423:100835595:100840316:100840401100835423:100835595ENSG00000140105.13ENST00000557722.1,ENST00000556295.1
exon_skip_11589214100828192:100828258:100835423:100835595:100840472:100840486100835423:100835595ENSG00000140105.13ENST00000557135.1,ENST00000556698.1,ENST00000553524.1,ENST00000553545.1,ENST00000554820.1,ENST00000556209.1,ENST00000554605.1,ENST00000555813.1,ENST00000556695.1,ENST00000555031.1
exon_skip_11589314100828192:100828258:100835423:100835595:100841619:100841670100835423:100835595ENSG00000140105.13ENST00000553808.1,ENST00000554772.1,ENST00000553413.1,ENST00000557094.1,ENST00000553769.2
exon_skip_11589514100828192:100828258:100835423:100835595:100842596:100842622100835423:100835595ENSG00000140105.13ENST00000355338.2,ENST00000554331.1,ENST00000557239.1,ENST00000556579.1
exon_skip_11591414100828192:100828258:100841619:100841687:100841847:100841944100841619:100841687ENSG00000140105.13ENST00000556645.1
exon_skip_11591814100828192:100828258:100841619:100841743:100842596:100842622100841619:100841743ENSG00000140105.13ENST00000556504.1
exon_skip_11593514100835456:100835595:100840316:100840401:100841619:100841670100840316:100840401ENSG00000140105.13ENST00000556295.1
exon_skip_11593614100835456:100835595:100840316:100840401:100842596:100842622100840316:100840401ENSG00000140105.13ENST00000557722.1
exon_skip_11593714100835456:100835595:100840472:100840486:100841619:100841670100840472:100840486ENSG00000140105.13ENST00000554820.1
exon_skip_11593914100835456:100835595:100840472:100840516:100841619:100841670100840472:100840516ENSG00000140105.13ENST00000556698.1
exon_skip_11594014100835456:100835595:100840472:100840557:100841619:100841670100840472:100840557ENSG00000140105.13ENST00000555813.1
exon_skip_11594114100835456:100835595:100840472:100840581:100841619:100841670100840472:100840581ENSG00000140105.13ENST00000554509.1,ENST00000554605.1,ENST00000555031.1,ENST00000553581.1
exon_skip_11594314100835456:100835595:100840472:100840581:100842596:100842622100840472:100840581ENSG00000140105.13ENST00000553524.1
exon_skip_11594414100835456:100835595:100840472:100840602:100841619:100841670100840472:100840602ENSG00000140105.13ENST00000557135.1,ENST00000557297.1,ENST00000556209.1
exon_skip_11594514100835445:100835595:100840472:100840602:100841847:100841944100840472:100840602ENSG00000140105.13ENST00000553545.1
exon_skip_11594914100835456:100835595:100841619:100841687:100842596:100842622100841619:100841687ENSG00000140105.13ENST00000554772.1
exon_skip_11595014100835456:100835595:100841619:100841740:100842596:100842622100841619:100841740ENSG00000140105.13ENST00000553413.1
exon_skip_11595114100835445:100835595:100841619:100841743:100841847:100841944100841619:100841743ENSG00000140105.13ENST00000553934.1
exon_skip_11595214100835456:100835595:100841619:100841743:100842596:100842622100841619:100841743ENSG00000140105.13ENST00000553769.2
exon_skip_11597414100840472:100840581:100841619:100841743:100842596:100842622100841619:100841743ENSG00000140105.13ENST00000554605.1
exon_skip_11597514100840472:100840581:100841619:100841883:100842596:100842622100841619:100841883ENSG00000140105.13ENST00000553581.1
exon_skip_11598014100840472:100840602:100841619:100841743:100842596:100842622100841619:100841743ENSG00000140105.13ENST00000556209.1

check button PSI values of skipped exons in GTEx.
psi gtex

* Skipped exon sequences.

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Open reading frame (ORF) annotation in the exon skipping event for WARS

check button Open reading frame (ORF) of individual exon skipping events in TCGA based on the Ensembl gene structure combined from isoforms.
ENSTStart of skipped exonEnd of skipped exonORF
ENST000003553381008354231008355953UTR-3CDS
ENST000005571351008354231008355953UTR-3CDS
ENST000005571351008404721008406023UTR-3UTR
ENST00000355338100813082100813183Frame-shift
ENST00000392882100813082100813183Frame-shift
ENST00000557135100813082100813183Frame-shift
ENST00000355338100826890100826999Frame-shift
ENST00000392882100826890100826999Frame-shift
ENST00000557135100826890100826999Frame-shift
ENST00000355338100803398100803539In-frame
ENST00000392882100803398100803539In-frame
ENST00000557135100803398100803539In-frame
ENST00000355338100808734100808908In-frame
ENST00000392882100808734100808908In-frame
ENST00000557135100808734100808908In-frame
ENST00000355338100820783100820903In-frame
ENST00000392882100820783100820903In-frame
ENST00000557135100820783100820903In-frame

check button Open reading frame (ORF) of individual exon skipping events in GTEx based on the Ensembl gene structure combined from isoforms.
ENSTStart of skipped exonEnd of skipped exonORF
ENST000003553381008354231008355953UTR-3CDS
ENST000005571351008354231008355953UTR-3CDS
ENST000005571351008404721008406023UTR-3UTR
ENST00000355338100813082100813183Frame-shift
ENST00000392882100813082100813183Frame-shift
ENST00000557135100813082100813183Frame-shift
ENST00000355338100826890100826999Frame-shift
ENST00000392882100826890100826999Frame-shift
ENST00000557135100826890100826999Frame-shift
ENST00000355338100803398100803539In-frame
ENST00000392882100803398100803539In-frame
ENST00000557135100803398100803539In-frame
ENST00000355338100808734100808908In-frame
ENST00000392882100808734100808908In-frame
ENST00000557135100808734100808908In-frame
ENST00000355338100820783100820903In-frame
ENST00000392882100820783100820903In-frame
ENST00000557135100820783100820903In-frame

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Infer the effects of exon skipping event on protein functional features for WARS

check button Exon skipping at the protein sequence level and followed lost functional features.
* Click on the image to enlarge it in a new window.
prot feature distribution

check button Loci of skipped exons in TCGA across genomic, transcript, and protein sequence levels of In-frame cases.
ENSTLength of mRNALength of AA seq.Genomic startGenomic endmRNA startmRNA endAA startAA end
ENST00000355338310947110082078310082090310421161141180
ENST000003928822955471100820783100820903858977141180
ENST000005571352097471100820783100820903691810141180
ENST00000355338310947110080873410080890815591732313371
ENST00000392882295547110080873410080890813751548313371
ENST00000557135209747110080873410080890812081381313371
ENST00000355338310947110080339810080353917331873371418
ENST00000392882295547110080339810080353915491689371418
ENST00000557135209747110080339810080353913821522371418

check button Loci of skipped exons in GTEx across genomic, transcript, and protein sequence levels of In-frame cases.
ENSTLength of mRNALength of AA seq.Genomic startGenomic endmRNA startmRNA endAA startAA end
ENST00000355338310947110082078310082090310421161141180
ENST000003928822955471100820783100820903858977141180
ENST000005571352097471100820783100820903691810141180
ENST00000355338310947110080873410080890815591732313371
ENST00000392882295547110080873410080890813751548313371
ENST00000557135209747110080873410080890812081381313371
ENST00000355338310947110080339810080353917331873371418
ENST00000392882295547110080339810080353915491689371418
ENST00000557135209747110080339810080353913821522371418

check button Lost protein functional features of individual exon skipping events in TCGA.
UniProt acc.Start of exon skipping (AA)End of exon skipping (AA)Protein feature start (AA)Protein feature end (AA)Category of protein featureDescription of feature
P23381141180136142Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381141180136142Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381141180136142Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381141180156162Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381141180156162Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381141180156162Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381141180166168Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:5UJJ
P23381141180166168Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:5UJJ
P23381141180166168Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:5UJJ
P233811411802471ChainID=PRO_0000136738;Note=Tryptophan--tRNA ligase%2C cytoplasmic
P233811411802471ChainID=PRO_0000136738;Note=Tryptophan--tRNA ligase%2C cytoplasmic
P233811411802471ChainID=PRO_0000136738;Note=Tryptophan--tRNA ligase%2C cytoplasmic
P2338114118071471ChainID=PRO_0000386461;Note=T1-TrpRS
P2338114118071471ChainID=PRO_0000386461;Note=T1-TrpRS
P2338114118071471ChainID=PRO_0000386461;Note=T1-TrpRS
P2338114118094471ChainID=PRO_0000386462;Note=T2-TrpRS
P2338114118094471ChainID=PRO_0000386462;Note=T2-TrpRS
P2338114118094471ChainID=PRO_0000386462;Note=T2-TrpRS
P23381141180143150HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381141180143150HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381141180143150HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381141180171187HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381141180171187HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381141180171187HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381141180154154Modified residueNote=N6-succinyllysine;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P32921
P23381141180154154Modified residueNote=N6-succinyllysine;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P32921
P23381141180154154Modified residueNote=N6-succinyllysine;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P32921
P23381141180164173MotifNote="HIGH" region
P23381141180164173MotifNote="HIGH" region
P23381141180164173MotifNote="HIGH" region
P23381141180151153TurnOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381141180151153TurnOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381141180151153TurnOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381313371333337Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381313371333337Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381313371333337Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381313371345349Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381313371345349Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381313371345349Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381313371354357Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381313371354357Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381313371354357Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381313371360362Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:2AZX
P23381313371360362Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:2AZX
P23381313371360362Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:2AZX
P233813133712471ChainID=PRO_0000136738;Note=Tryptophan--tRNA ligase%2C cytoplasmic
P233813133712471ChainID=PRO_0000136738;Note=Tryptophan--tRNA ligase%2C cytoplasmic
P233813133712471ChainID=PRO_0000136738;Note=Tryptophan--tRNA ligase%2C cytoplasmic
P2338131337171471ChainID=PRO_0000386461;Note=T1-TrpRS
P2338131337171471ChainID=PRO_0000386461;Note=T1-TrpRS
P2338131337171471ChainID=PRO_0000386461;Note=T1-TrpRS
P2338131337194471ChainID=PRO_0000386462;Note=T2-TrpRS
P2338131337194471ChainID=PRO_0000386462;Note=T2-TrpRS
P2338131337194471ChainID=PRO_0000386462;Note=T2-TrpRS
P23381313371311313HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381313371311313HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381313371311313HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381313371314323HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381313371314323HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381313371314323HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381313371324327HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381313371324327HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381313371324327HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381313371365374HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381313371365374HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381313371365374HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381313371351351Modified residueNote=Phosphoserine;Ontology_term=ECO:0000244;evidence=ECO:0000244|PubMed:23186163;Dbxref=PMID:23186163
P23381313371351351Modified residueNote=Phosphoserine;Ontology_term=ECO:0000244;evidence=ECO:0000244|PubMed:23186163;Dbxref=PMID:23186163
P23381313371351351Modified residueNote=Phosphoserine;Ontology_term=ECO:0000244;evidence=ECO:0000244|PubMed:23186163;Dbxref=PMID:23186163
P23381313371349353MotifNote="KMSKS" region
P23381313371349353MotifNote="KMSKS" region
P23381313371349353MotifNote="KMSKS" region
P23381371418379381Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:5UJI
P23381371418379381Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:5UJI
P23381371418379381Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:5UJI
P233813714182471ChainID=PRO_0000136738;Note=Tryptophan--tRNA ligase%2C cytoplasmic
P233813714182471ChainID=PRO_0000136738;Note=Tryptophan--tRNA ligase%2C cytoplasmic
P233813714182471ChainID=PRO_0000136738;Note=Tryptophan--tRNA ligase%2C cytoplasmic
P2338137141871471ChainID=PRO_0000386461;Note=T1-TrpRS
P2338137141871471ChainID=PRO_0000386461;Note=T1-TrpRS
P2338137141871471ChainID=PRO_0000386461;Note=T1-TrpRS
P2338137141894471ChainID=PRO_0000386462;Note=T2-TrpRS
P2338137141894471ChainID=PRO_0000386462;Note=T2-TrpRS
P2338137141894471ChainID=PRO_0000386462;Note=T2-TrpRS
P23381371418365374HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381371418365374HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381371418365374HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381371418384390HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381371418384390HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381371418384390HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381371418398406HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381371418398406HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381371418398406HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381371418410422HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381371418410422HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381371418410422HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381371418394396TurnOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381371418394396TurnOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381371418394396TurnOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U


check button Lost protein functional features of individual exon skipping events in GTEx.
UniProt acc.Start of exon skipping (AA)End of exon skipping (AA)Protein feature start (AA)Protein feature end (AA)Category of protein featureDescription of feature
P23381141180136142Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381141180136142Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381141180136142Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381141180156162Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381141180156162Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381141180156162Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381141180166168Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:5UJJ
P23381141180166168Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:5UJJ
P23381141180166168Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:5UJJ
P233811411802471ChainID=PRO_0000136738;Note=Tryptophan--tRNA ligase%2C cytoplasmic
P233811411802471ChainID=PRO_0000136738;Note=Tryptophan--tRNA ligase%2C cytoplasmic
P233811411802471ChainID=PRO_0000136738;Note=Tryptophan--tRNA ligase%2C cytoplasmic
P2338114118071471ChainID=PRO_0000386461;Note=T1-TrpRS
P2338114118071471ChainID=PRO_0000386461;Note=T1-TrpRS
P2338114118071471ChainID=PRO_0000386461;Note=T1-TrpRS
P2338114118094471ChainID=PRO_0000386462;Note=T2-TrpRS
P2338114118094471ChainID=PRO_0000386462;Note=T2-TrpRS
P2338114118094471ChainID=PRO_0000386462;Note=T2-TrpRS
P23381141180143150HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381141180143150HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381141180143150HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381141180171187HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381141180171187HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381141180171187HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381141180154154Modified residueNote=N6-succinyllysine;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P32921
P23381141180154154Modified residueNote=N6-succinyllysine;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P32921
P23381141180154154Modified residueNote=N6-succinyllysine;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P32921
P23381141180164173MotifNote="HIGH" region
P23381141180164173MotifNote="HIGH" region
P23381141180164173MotifNote="HIGH" region
P23381141180151153TurnOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381141180151153TurnOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381141180151153TurnOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381313371333337Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381313371333337Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381313371333337Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381313371345349Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381313371345349Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381313371345349Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381313371354357Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381313371354357Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381313371354357Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381313371360362Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:2AZX
P23381313371360362Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:2AZX
P23381313371360362Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:2AZX
P233813133712471ChainID=PRO_0000136738;Note=Tryptophan--tRNA ligase%2C cytoplasmic
P233813133712471ChainID=PRO_0000136738;Note=Tryptophan--tRNA ligase%2C cytoplasmic
P233813133712471ChainID=PRO_0000136738;Note=Tryptophan--tRNA ligase%2C cytoplasmic
P2338131337171471ChainID=PRO_0000386461;Note=T1-TrpRS
P2338131337171471ChainID=PRO_0000386461;Note=T1-TrpRS
P2338131337171471ChainID=PRO_0000386461;Note=T1-TrpRS
P2338131337194471ChainID=PRO_0000386462;Note=T2-TrpRS
P2338131337194471ChainID=PRO_0000386462;Note=T2-TrpRS
P2338131337194471ChainID=PRO_0000386462;Note=T2-TrpRS
P23381313371311313HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381313371311313HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381313371311313HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381313371314323HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381313371314323HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381313371314323HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381313371324327HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381313371324327HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381313371324327HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381313371365374HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381313371365374HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381313371365374HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381313371351351Modified residueNote=Phosphoserine;Ontology_term=ECO:0000244;evidence=ECO:0000244|PubMed:23186163;Dbxref=PMID:23186163
P23381313371351351Modified residueNote=Phosphoserine;Ontology_term=ECO:0000244;evidence=ECO:0000244|PubMed:23186163;Dbxref=PMID:23186163
P23381313371351351Modified residueNote=Phosphoserine;Ontology_term=ECO:0000244;evidence=ECO:0000244|PubMed:23186163;Dbxref=PMID:23186163
P23381313371349353MotifNote="KMSKS" region
P23381313371349353MotifNote="KMSKS" region
P23381313371349353MotifNote="KMSKS" region
P23381371418379381Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:5UJI
P23381371418379381Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:5UJI
P23381371418379381Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:5UJI
P233813714182471ChainID=PRO_0000136738;Note=Tryptophan--tRNA ligase%2C cytoplasmic
P233813714182471ChainID=PRO_0000136738;Note=Tryptophan--tRNA ligase%2C cytoplasmic
P233813714182471ChainID=PRO_0000136738;Note=Tryptophan--tRNA ligase%2C cytoplasmic
P2338137141871471ChainID=PRO_0000386461;Note=T1-TrpRS
P2338137141871471ChainID=PRO_0000386461;Note=T1-TrpRS
P2338137141871471ChainID=PRO_0000386461;Note=T1-TrpRS
P2338137141894471ChainID=PRO_0000386462;Note=T2-TrpRS
P2338137141894471ChainID=PRO_0000386462;Note=T2-TrpRS
P2338137141894471ChainID=PRO_0000386462;Note=T2-TrpRS
P23381371418365374HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381371418365374HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381371418365374HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381371418384390HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381371418384390HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381371418384390HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381371418398406HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381371418398406HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381371418398406HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381371418410422HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381371418410422HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381371418410422HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381371418394396TurnOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381371418394396TurnOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U
P23381371418394396TurnOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1R6U


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SNVs in the skipped exons for WARS

check button - Lollipop plot for presenting exon skipping associated SNVs.
* Click on the image to enlarge it in a new window.
lollipop

check button - Differential PSIs between mutated versus non-mutated samples.

check button - Non-synonymous mutations located in the skipped exons in TCGA.
Cancer typeSampleESIDSkipped exon startSkipped exon endMutation startMutation endMutation typeReference seqMutation seqAAchange
THYMTCGA-ZB-A966-01exon_skip_115835
100808735100808908100808873100808873Frame_Shift_DelG-p.P325fs
THYMTCGA-ZB-A966-01exon_skip_115835
100808735100808908100808873100808873Frame_Shift_DelG-p.R326fs
STADTCGA-CG-5723-01exon_skip_115848
100820784100820903100820838100820838Frame_Shift_DelC-p.G163fs
LIHCTCGA-DD-A39Y-01exon_skip_115853
100828045100828258100828216100828216Frame_Shift_DelT-p.M48fs
LIHCTCGA-BC-A112-01exon_skip_115835
100808735100808908100808872100808873Frame_Shift_Ins-Gp.R326fs
READTCGA-F5-6814-01exon_skip_115851
100826891100826999100826958100826958Nonsense_MutationGAp.R119X
BLCATCGA-G2-AA3B-01exon_skip_115895
exon_skip_115893
exon_skip_115892
exon_skip_115891
100835424100835595100835428100835428Nonsense_MutationGCp.S32*

check button - Depth of coverage in the three exons composing exon skipping event
Depth of coverage in three exonsMutation description

check button - Non-synonymous mutations located in the skipped exons in CCLE.
SampleSkipped exon startSkipped exon endMutation startMutation endMutation typeReference seqMutation seqAAchange
MN60_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE100820784100820903100820838100820838Frame_Shift_DelC-p.G163fs
HMY1_SKIN100803399100803539100803500100803500Missense_MutationCTp.E385K
SNU423_LIVER100803399100803539100803500100803500Missense_MutationCTp.E385K
IM95_STOMACH100808735100808908100808757100808757Missense_MutationGAp.T364M
HT115_LARGE_INTESTINE100813083100813183100813115100813115Missense_MutationCTp.G265D
HCT116_LARGE_INTESTINE100813083100813183100813134100813134Missense_MutationTCp.T259A
COGN278_AUTONOMIC_GANGLIA100820784100820903100820803100820803Missense_MutationTCp.I175V
HEC6_ENDOMETRIUM100820784100820903100820835100820835Missense_MutationGAp.P164L
NCIH650_LUNG100820784100820903100820841100820841Missense_MutationCTp.R162Q
NALM6_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE100820784100820903100820841100820841Missense_MutationCTp.R162Q
SKLU1_LUNG100826891100826999100826915100826915Missense_MutationCTp.R133H
SNU1040_LARGE_INTESTINE100826891100826999100826916100826916Missense_MutationGAp.R133C
NCIH513_PLEURA100826891100826999100826970100826970Missense_MutationCGp.E115Q
HEC251_ENDOMETRIUM100826891100826999100826997100826997Missense_MutationGAp.R106W
UO31_KIDNEY100828045100828258100828074100828074Missense_MutationGTp.A95E
HCT15_LARGE_INTESTINE100828045100828258100828200100828200Missense_MutationGAp.A53V
NCIBL128_MATCHED_NORMAL_TISSUE100828045100828258100828245100828245Missense_MutationGTp.S38Y
HCC15_LUNG100835424100835595100835431100835431Missense_MutationGAp.A31V
HCC2998_LARGE_INTESTINE100835424100835595100835431100835431Missense_MutationGAp.A31V
SKUT1_SOFT_TISSUE100835424100835595100835456100835456Missense_MutationCTp.V23I
NCIH513_PLEURA100835424100835595100835456100835456Missense_MutationCAp.V23L
SNU1040_LARGE_INTESTINE100835424100835595100835474100835474Missense_MutationCTp.A17T
CCK81_LARGE_INTESTINE100835424100835595100835504100835504Missense_MutationCAp.A7S

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Splicing Quantitative Trait Loci (sQTL) in the exon skipping event for WARS

check button sQTL information located at the skipped exons.
Exon skip IDChromosomeThree exonsSkippped exonENSTCancer typeSNP idLocationDNA change (ref/var)P-value
exon_skip_11583914100809611:100809724:100813082:100813183:100820023:100820206100813082:100813183ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1GBMrs941923chr14:100813077T/C6.74e-19
exon_skip_11583914100809611:100809724:100813082:100813183:100820023:100820206100813082:100813183ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1GBMrs941923chr14:100813077T/C3.32e-05
exon_skip_11583914100809611:100809724:100813082:100813183:100820023:100820206100813082:100813183ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1GBMrs941923chr14:100813077T/C1.60e-04
exon_skip_11583914100809611:100809724:100813082:100813183:100820023:100820206100813082:100813183ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1CESCrs941923chr14:100813077T/C2.19e-24
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exon_skip_11583914100809611:100809724:100813082:100813183:100820023:100820206100813082:100813183ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1UCECrs941923chr14:100813077T/C2.72e-07
exon_skip_11583514100803398:100803539:100808734:100808908:100809611:100809724100808734:100808908ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1GBMrs9453chr14:100808845G/A2.22e-18
exon_skip_11583514100803398:100803539:100808734:100808908:100809611:100809724100808734:100808908ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1GBMrs9453chr14:100808845G/A8.37e-05
exon_skip_11583514100803398:100803539:100808734:100808908:100809611:100809724100808734:100808908ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1GBMrs9453chr14:100808845G/A4.92e-04
exon_skip_11583514100803398:100803539:100808734:100808908:100809611:100809724100808734:100808908ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1CESCrs9453chr14:100808845G/A5.18e-24
exon_skip_11583514100803398:100803539:100808734:100808908:100809611:100809724100808734:100808908ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1CESCrs9453chr14:100808845G/A3.19e-06
exon_skip_11583514100803398:100803539:100808734:100808908:100809611:100809724100808734:100808908ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1CESCrs9453chr14:100808845G/A2.31e-05
exon_skip_11583514100803398:100803539:100808734:100808908:100809611:100809724100808734:100808908ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1COADrs9453chr14:100808845G/A2.85e-32
exon_skip_11583514100803398:100803539:100808734:100808908:100809611:100809724100808734:100808908ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1COADrs9453chr14:100808845G/A1.59e-07
exon_skip_11583514100803398:100803539:100808734:100808908:100809611:100809724100808734:100808908ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1COADrs9453chr14:100808845G/A1.59e-07
exon_skip_11583514100803398:100803539:100808734:100808908:100809611:100809724100808734:100808908ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1BLCArs9453chr14:100808845G/A2.87e-06
exon_skip_11583514100803398:100803539:100808734:100808908:100809611:100809724100808734:100808908ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1BLCArs9453chr14:100808845G/A6.38e-05
exon_skip_11583514100803398:100803539:100808734:100808908:100809611:100809724100808734:100808908ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1ESCArs9453chr14:100808845G/A9.24e-24
exon_skip_11583514100803398:100803539:100808734:100808908:100809611:100809724100808734:100808908ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1ESCArs9453chr14:100808845G/A1.96e-13
exon_skip_11583514100803398:100803539:100808734:100808908:100809611:100809724100808734:100808908ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1ESCArs9453chr14:100808845G/A1.96e-13
exon_skip_11583514100803398:100803539:100808734:100808908:100809611:100809724100808734:100808908ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1HNSCrs9453chr14:100808845G/A2.47e-60
exon_skip_11583514100803398:100803539:100808734:100808908:100809611:100809724100808734:100808908ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1HNSCrs9453chr14:100808845G/A1.39e-13
exon_skip_11583514100803398:100803539:100808734:100808908:100809611:100809724100808734:100808908ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1HNSCrs9453chr14:100808845G/A7.95e-12
exon_skip_11583514100803398:100803539:100808734:100808908:100809611:100809724100808734:100808908ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1KICHrs9453chr14:100808845G/A7.09e-09
exon_skip_11583514100803398:100803539:100808734:100808908:100809611:100809724100808734:100808908ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1LAMLrs9453chr14:100808845G/A1.68e-10
exon_skip_11583514100803398:100803539:100808734:100808908:100809611:100809724100808734:100808908ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1LAMLrs9453chr14:100808845G/A9.97e-09
exon_skip_11583514100803398:100803539:100808734:100808908:100809611:100809724100808734:100808908ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1KIRPrs9453chr14:100808845G/A3.96e-07
exon_skip_11583514100803398:100803539:100808734:100808908:100809611:100809724100808734:100808908ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1KIRPrs9453chr14:100808845G/A7.88e-05
exon_skip_11583514100803398:100803539:100808734:100808908:100809611:100809724100808734:100808908ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1KIRPrs9453chr14:100808845G/A1.30e-03
exon_skip_11583514100803398:100803539:100808734:100808908:100809611:100809724100808734:100808908ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1LGGrs9453chr14:100808845G/A5.06e-35
exon_skip_11583514100803398:100803539:100808734:100808908:100809611:100809724100808734:100808908ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1LGGrs9453chr14:100808845G/A3.08e-09
exon_skip_11583514100803398:100803539:100808734:100808908:100809611:100809724100808734:100808908ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1LGGrs9453chr14:100808845G/A4.47e-09
exon_skip_11583514100803398:100803539:100808734:100808908:100809611:100809724100808734:100808908ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1LGGrs9453chr14:100808845G/A1.03e-04
exon_skip_11583514100803398:100803539:100808734:100808908:100809611:100809724100808734:100808908ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1LGGrs9453chr14:100808845G/A3.81e-03
exon_skip_11583514100803398:100803539:100808734:100808908:100809611:100809724100808734:100808908ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1KIRCrs9453chr14:100808845G/A3.35e-74
exon_skip_11583514100803398:100803539:100808734:100808908:100809611:100809724100808734:100808908ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1KIRCrs9453chr14:100808845G/A4.45e-06
exon_skip_11583514100803398:100803539:100808734:100808908:100809611:100809724100808734:100808908ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1KIRCrs9453chr14:100808845G/A1.25e-05
exon_skip_11583514100803398:100803539:100808734:100808908:100809611:100809724100808734:100808908ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1LUADrs9453chr14:100808845G/A1.43e-85
exon_skip_11583514100803398:100803539:100808734:100808908:100809611:100809724100808734:100808908ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1LUADrs9453chr14:100808845G/A4.83e-23
exon_skip_11583514100803398:100803539:100808734:100808908:100809611:100809724100808734:100808908ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1LUADrs9453chr14:100808845G/A3.76e-21
exon_skip_11583514100803398:100803539:100808734:100808908:100809611:100809724100808734:100808908ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1MESOrs9453chr14:100808845G/A1.79e-16
exon_skip_11583514100803398:100803539:100808734:100808908:100809611:100809724100808734:100808908ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1LUSCrs9453chr14:100808845G/A9.93e-80
exon_skip_11583514100803398:100803539:100808734:100808908:100809611:100809724100808734:100808908ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1LUSCrs9453chr14:100808845G/A6.61e-19
exon_skip_11583514100803398:100803539:100808734:100808908:100809611:100809724100808734:100808908ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1LUSCrs9453chr14:100808845G/A6.61e-19
exon_skip_11583514100803398:100803539:100808734:100808908:100809611:100809724100808734:100808908ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1READrs9453chr14:100808845G/A2.53e-10
exon_skip_11583514100803398:100803539:100808734:100808908:100809611:100809724100808734:100808908ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1PCPGrs9453chr14:100808845G/A8.26e-15
exon_skip_11583514100803398:100803539:100808734:100808908:100809611:100809724100808734:100808908ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1PCPGrs9453chr14:100808845G/A3.18e-06
exon_skip_11583514100803398:100803539:100808734:100808908:100809611:100809724100808734:100808908ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1PCPGrs9453chr14:100808845G/A3.18e-06
exon_skip_11583514100803398:100803539:100808734:100808908:100809611:100809724100808734:100808908ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1PAADrs9453chr14:100808845G/A2.41e-20
exon_skip_11583514100803398:100803539:100808734:100808908:100809611:100809724100808734:100808908ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1PAADrs9453chr14:100808845G/A1.50e-04
exon_skip_11583514100803398:100803539:100808734:100808908:100809611:100809724100808734:100808908ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1PAADrs9453chr14:100808845G/A1.50e-04
exon_skip_11583514100803398:100803539:100808734:100808908:100809611:100809724100808734:100808908ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1PRADrs9453chr14:100808845G/A1.65e-44
exon_skip_11583514100803398:100803539:100808734:100808908:100809611:100809724100808734:100808908ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1PRADrs9453chr14:100808845G/A2.89e-26
exon_skip_11583514100803398:100803539:100808734:100808908:100809611:100809724100808734:100808908ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1PRADrs9453chr14:100808845G/A1.41e-22
exon_skip_11583514100803398:100803539:100808734:100808908:100809611:100809724100808734:100808908ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1PRADrs9453chr14:100808845G/A8.67e-06
exon_skip_11583514100803398:100803539:100808734:100808908:100809611:100809724100808734:100808908ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1PRADrs9453chr14:100808845G/A2.12e-04
exon_skip_11583514100803398:100803539:100808734:100808908:100809611:100809724100808734:100808908ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1PRADrs9453chr14:100808845G/A9.25e-04
exon_skip_11583514100803398:100803539:100808734:100808908:100809611:100809724100808734:100808908ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1SARCrs9453chr14:100808845G/A1.00e-25
exon_skip_11583514100803398:100803539:100808734:100808908:100809611:100809724100808734:100808908ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1TGCTrs9453chr14:100808845G/A3.22e-09
exon_skip_11583514100803398:100803539:100808734:100808908:100809611:100809724100808734:100808908ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1TGCTrs9453chr14:100808845G/A2.87e-07
exon_skip_11583514100803398:100803539:100808734:100808908:100809611:100809724100808734:100808908ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1TGCTrs9453chr14:100808845G/A2.87e-07
exon_skip_11583514100803398:100803539:100808734:100808908:100809611:100809724100808734:100808908ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1SKCMrs9453chr14:100808845G/A1.14e-10
exon_skip_11583514100803398:100803539:100808734:100808908:100809611:100809724100808734:100808908ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1SKCMrs9453chr14:100808845G/A1.90e-04
exon_skip_11583514100803398:100803539:100808734:100808908:100809611:100809724100808734:100808908ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1SKCMrs9453chr14:100808845G/A1.90e-04
exon_skip_11583514100803398:100803539:100808734:100808908:100809611:100809724100808734:100808908ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1STADrs9453chr14:100808845G/A2.43e-76
exon_skip_11583514100803398:100803539:100808734:100808908:100809611:100809724100808734:100808908ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1STADrs9453chr14:100808845G/A1.55e-17
exon_skip_11583514100803398:100803539:100808734:100808908:100809611:100809724100808734:100808908ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1STADrs9453chr14:100808845G/A1.55e-17
exon_skip_11583514100803398:100803539:100808734:100808908:100809611:100809724100808734:100808908ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1STADrs9453chr14:100808845G/A3.36e-04
exon_skip_11583514100803398:100803539:100808734:100808908:100809611:100809724100808734:100808908ENST00000392882.2,ENST00000556645.1,ENST00000358655.4,ENST00000355338.2,ENST00000554950.1,ENST00000344102.5,ENST00000557135.1THCArs9453chr14:100808845G/A1.68e-61
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exon_skip_11594514100835445:100835595:100840472:100840602:100841847:100841944100840472:100840602ENST00000553545.1UVMrs941928chr14:100840596G/C1.63e-08
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exon_skip_11594414100835456:100835595:100840472:100840602:100841619:100841670100840472:100840602ENST00000556209.1,ENST00000557135.1,ENST00000557297.1KICHrs941928chr14:100840596G/C2.96e-10
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exon_skip_11594414100835456:100835595:100840472:100840602:100841619:100841670100840472:100840602ENST00000556209.1,ENST00000557135.1,ENST00000557297.1LGGrs941928chr14:100840596G/C1.32e-36
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exon_skip_11594414100835456:100835595:100840472:100840602:100841619:100841670100840472:100840602ENST00000556209.1,ENST00000557135.1,ENST00000557297.1STADrs941928chr14:100840596G/C7.53e-94
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exon_skip_11594414100835456:100835595:100840472:100840602:100841619:100841670100840472:100840602ENST00000556209.1,ENST00000557135.1,ENST00000557297.1THCArs941928chr14:100840596G/C7.15e-89
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exon_skip_11588414100828192:100828258:100832290:100832404:100835423:100835558100832290:100832404ENST00000556783.1CESCrs724391chr14:100832391T/C1.44e-24
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exon_skip_11591814100828192:100828258:100841619:100841743:100842596:100842622100841619:100841743ENST00000556504.1PAADrs7143006chr14:100841700A/T1.67e-07
exon_skip_11591814100828192:100828258:100841619:100841743:100842596:100842622100841619:100841743ENST00000556504.1PRADrs7143006chr14:100841700A/T5.86e-50
exon_skip_11591814100828192:100828258:100841619:100841743:100842596:100842622100841619:100841743ENST00000556504.1PRADrs7143006chr14:100841700A/T1.46e-32
exon_skip_11591814100828192:100828258:100841619:100841743:100842596:100842622100841619:100841743ENST00000556504.1PRADrs7143006chr14:100841700A/T9.15e-29
exon_skip_11591814100828192:100828258:100841619:100841743:100842596:100842622100841619:100841743ENST00000556504.1PRADrs7143006chr14:100841700A/T1.98e-04
exon_skip_11591814100828192:100828258:100841619:100841743:100842596:100842622100841619:100841743ENST00000556504.1PRADrs7143006chr14:100841700A/T6.86e-04
exon_skip_11591814100828192:100828258:100841619:100841743:100842596:100842622100841619:100841743ENST00000556504.1PRADrs7143006chr14:100841700A/T1.78e-03
exon_skip_11591814100828192:100828258:100841619:100841743:100842596:100842622100841619:100841743ENST00000556504.1SARCrs7143006chr14:100841700A/T2.18e-26
exon_skip_11591814100828192:100828258:100841619:100841743:100842596:100842622100841619:100841743ENST00000556504.1SARCrs7143006chr14:100841700A/T3.51e-04
exon_skip_11591814100828192:100828258:100841619:100841743:100842596:100842622100841619:100841743ENST00000556504.1TGCTrs7143006chr14:100841700A/T7.96e-16
exon_skip_11591814100828192:100828258:100841619:100841743:100842596:100842622100841619:100841743ENST00000556504.1TGCTrs7143006chr14:100841700A/T1.41e-08
exon_skip_11591814100828192:100828258:100841619:100841743:100842596:100842622100841619:100841743ENST00000556504.1TGCTrs7143006chr14:100841700A/T1.41e-08
exon_skip_11591814100828192:100828258:100841619:100841743:100842596:100842622100841619:100841743ENST00000556504.1SKCMrs7143006chr14:100841700A/T1.79e-17
exon_skip_11591814100828192:100828258:100841619:100841743:100842596:100842622100841619:100841743ENST00000556504.1SKCMrs7143006chr14:100841700A/T3.71e-06
exon_skip_11591814100828192:100828258:100841619:100841743:100842596:100842622100841619:100841743ENST00000556504.1SKCMrs7143006chr14:100841700A/T3.71e-06
exon_skip_11591814100828192:100828258:100841619:100841743:100842596:100842622100841619:100841743ENST00000556504.1STADrs7143006chr14:100841700A/T1.20e-88
exon_skip_11591814100828192:100828258:100841619:100841743:100842596:100842622100841619:100841743ENST00000556504.1STADrs7143006chr14:100841700A/T3.19e-22
exon_skip_11591814100828192:100828258:100841619:100841743:100842596:100842622100841619:100841743ENST00000556504.1STADrs7143006chr14:100841700A/T3.19e-22
exon_skip_11591814100828192:100828258:100841619:100841743:100842596:100842622100841619:100841743ENST00000556504.1THCArs7143006chr14:100841700A/T4.87e-79
exon_skip_11591814100828192:100828258:100841619:100841743:100842596:100842622100841619:100841743ENST00000556504.1THCArs7143006chr14:100841700A/T5.57e-34
exon_skip_11591814100828192:100828258:100841619:100841743:100842596:100842622100841619:100841743ENST00000556504.1THCArs7143006chr14:100841700A/T5.59e-34
exon_skip_11591814100828192:100828258:100841619:100841743:100842596:100842622100841619:100841743ENST00000556504.1THCArs7143006chr14:100841700A/T1.80e-05
exon_skip_11591814100828192:100828258:100841619:100841743:100842596:100842622100841619:100841743ENST00000556504.1UVMrs7143006chr14:100841700A/T1.63e-08
exon_skip_11591814100828192:100828258:100841619:100841743:100842596:100842622100841619:100841743ENST00000556504.1UCECrs7143006chr14:100841700A/T9.22e-07
exon_skip_11591814100828192:100828258:100841619:100841743:100842596:100842622100841619:100841743ENST00000556504.1UCECrs7143006chr14:100841700A/T2.23e-05

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Splicing Quantitative Trait Methylation (sQTM) in the skipped exon for WARS


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Survival analysis of Splicing Quantitative Trait Methylation (sQTM) in the skipped exon for WARS


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RelatedDrugs for WARS

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.0 2018-04-02)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status
P23381DB00150L-TryptophanTryptophan--tRNA ligase, cytoplasmicsmall moleculeapproved|nutraceutical|withdrawn

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RelatedDiseases for WARS

check button Diseases associated with this gene.
(DisGeNet 4.0)
GeneDisease IDDisease name# pubmedsSource