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| Open reading frame (ORF) annotation in the exon skipping event |
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| Splicing Quantitative Trait Loci (sQTLs) in the skipped exons |
| Splicing Quantitative Trait Methylation (sQTM) in the skipped exon |
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Gene summary for ARID4B |
 Gene summary |
| Gene information | Gene symbol | ARID4B | Gene ID | 51742 |
| Gene name | AT-rich interaction domain 4B | |
| Synonyms | BCAA|BRCAA1|RBBP1L1|RBP1L1|SAP180 | |
| Cytomap | 1q42.3 | |
| Type of gene | protein-coding | |
| Description | AT-rich interactive domain-containing protein 4B180 kDa Sin3-associated polypeptideARID domain-containing protein 4BAT rich interactive domain 4B (RBP1-like)Rb-binding protein homologSIN3A-associated protein 180breast cancer-associated antigen 1bre | |
| Modification date | 20180523 | |
| UniProtAcc | Q4LE39 | |
| Context | PubMed: ARID4B [Title/Abstract] AND exon [Title/Abstract] AND skip [Title/Abstract] - Title (PMID) |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
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Exon skipping events across known transcript of Ensembl for ARID4B from UCSC genome browser |
| Skipped exons in TCGA and GTEx based on Ensembl gene isoform structure. * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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Gene isoform structures and expression levels for ARID4B |
| Expression levels of gene isoforms across TCGA. |
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| Expression levels of gene isoforms across GTEx. |
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Exon skipping events with PSIs in TCGA for ARID4B |
| Information of exkip skipping event in TCGA. |
| Exon skip ID | chr | Exons involved in exon skipping | Skipped exon | ENSG | ENSTs |
| exon_skip_38246 | 1 | 235331858:235331967:235335932:235336079:235338498:235338714 | 235335932:235336079 | ENSG00000054267.16 | ENST00000474953.1,ENST00000366603.2,ENST00000349213.3,ENST00000421364.1,ENST00000264183.3 |
| exon_skip_38250 | 1 | 235338498:235338714:235340062:235340218:235341114:235341228 | 235340062:235340218 | ENSG00000054267.16 | ENST00000421364.1 |
| exon_skip_38254 | 1 | 235338498:235338714:235341114:235341228:235344899:235345180 | 235341114:235341228 | ENSG00000054267.16 | ENST00000474953.1,ENST00000366603.2,ENST00000349213.3,ENST00000264183.3 |
| exon_skip_38256 | 1 | 235341170:235341228:235344385:235344499:235344899:235345180 | 235344385:235344499 | ENSG00000054267.16 | ENST00000494543.1 |
| exon_skip_38257 | 1 | 235344899:235346108:235357327:235357526:235359345:235359430 | 235357327:235357526 | ENSG00000054267.16 | ENST00000366603.2,ENST00000349213.3,ENST00000421364.1,ENST00000471257.1,ENST00000264183.3,ENST00000491632.1,ENST00000444620.1 |
| exon_skip_38258 | 1 | 235359345:235359430:235377083:235377341:235383107:235383283 | 235377083:235377341 | ENSG00000054267.16 | ENST00000366603.2,ENST00000421364.1,ENST00000471257.1,ENST00000264183.3 |
| exon_skip_38259 | 1 | 235392545:235392700:235394427:235394504:235397727:235397807 | 235394427:235394504 | ENSG00000054267.16 | ENST00000366603.2,ENST00000349213.3,ENST00000421364.1,ENST00000471257.1,ENST00000466653.1,ENST00000264183.3,ENST00000418304.1,ENST00000491632.1 |
| exon_skip_38260 | 1 | 235394427:235394504:235397727:235397807:235403627:235403766 | 235397727:235397807 | ENSG00000054267.16 | ENST00000366603.2,ENST00000349213.3,ENST00000421364.1,ENST00000466653.1,ENST00000264183.3,ENST00000418304.1,ENST00000491632.1 |
| exon_skip_38261 | 1 | 235397727:235397807:235403627:235403766:235409734:235409826 | 235403627:235403766 | ENSG00000054267.16 | ENST00000366603.2,ENST00000349213.3,ENST00000421364.1,ENST00000466653.1,ENST00000264183.3,ENST00000418304.1,ENST00000491632.1 |
| exon_skip_38263 | 1 | 235416044:235416124:235418974:235419065:235420474:235420540 | 235418974:235419065 | ENSG00000054267.16 | ENST00000366603.2,ENST00000349213.3,ENST00000421364.1,ENST00000466653.1,ENST00000264183.3,ENST00000418304.1,ENST00000491632.1 |
| exon_skip_38265 | 1 | 235418974:235419065:235420474:235420540:235423956:235424067 | 235420474:235420540 | ENSG00000054267.16 | ENST00000366603.2,ENST00000349213.3,ENST00000421364.1,ENST00000466653.1,ENST00000264183.3,ENST00000418304.1,ENST00000491632.1 |
| PSI values of skipped exons in TCGA. |
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Exon skipping events with PSIs in GTEx for ARID4B |
| Information of exkip skipping event in GTEx |
| Exon skip ID | chr | Exons involved in exon skipping | Skipped exon | ENSG | ENSTs |
| exon_skip_38246 | 1 | 235331858:235331967:235335932:235336079:235338498:235338714 | 235335932:235336079 | ENSG00000054267.16 | ENST00000474953.1,ENST00000349213.3,ENST00000366603.2,ENST00000264183.3,ENST00000421364.1 |
| exon_skip_38250 | 1 | 235338498:235338714:235340062:235340218:235341114:235341228 | 235340062:235340218 | ENSG00000054267.16 | ENST00000421364.1 |
| exon_skip_38254 | 1 | 235338498:235338714:235341114:235341228:235344899:235345180 | 235341114:235341228 | ENSG00000054267.16 | ENST00000474953.1,ENST00000349213.3,ENST00000366603.2,ENST00000264183.3 |
| exon_skip_38256 | 1 | 235341170:235341228:235344385:235344499:235344899:235345180 | 235344385:235344499 | ENSG00000054267.16 | ENST00000494543.1 |
| exon_skip_38257 | 1 | 235344899:235346108:235357327:235357526:235359345:235359430 | 235357327:235357526 | ENSG00000054267.16 | ENST00000349213.3,ENST00000366603.2,ENST00000264183.3,ENST00000421364.1,ENST00000491632.1,ENST00000444620.1,ENST00000471257.1 |
| exon_skip_38258 | 1 | 235359345:235359430:235377083:235377341:235383107:235383283 | 235377083:235377341 | ENSG00000054267.16 | ENST00000366603.2,ENST00000264183.3,ENST00000421364.1,ENST00000471257.1 |
| exon_skip_38259 | 1 | 235392545:235392700:235394427:235394504:235397727:235397807 | 235394427:235394504 | ENSG00000054267.16 | ENST00000349213.3,ENST00000366603.2,ENST00000264183.3,ENST00000421364.1,ENST00000491632.1,ENST00000471257.1,ENST00000418304.1,ENST00000466653.1 |
| exon_skip_38260 | 1 | 235394427:235394504:235397727:235397807:235403627:235403766 | 235397727:235397807 | ENSG00000054267.16 | ENST00000349213.3,ENST00000366603.2,ENST00000264183.3,ENST00000421364.1,ENST00000491632.1,ENST00000418304.1,ENST00000466653.1 |
| exon_skip_38261 | 1 | 235397727:235397807:235403627:235403766:235409734:235409826 | 235403627:235403766 | ENSG00000054267.16 | ENST00000349213.3,ENST00000366603.2,ENST00000264183.3,ENST00000421364.1,ENST00000491632.1,ENST00000418304.1,ENST00000466653.1 |
| exon_skip_38263 | 1 | 235416044:235416124:235418974:235419065:235420474:235420540 | 235418974:235419065 | ENSG00000054267.16 | ENST00000349213.3,ENST00000366603.2,ENST00000264183.3,ENST00000421364.1,ENST00000491632.1,ENST00000418304.1,ENST00000466653.1 |
| exon_skip_38265 | 1 | 235418974:235419065:235420474:235420540:235423956:235424067 | 235420474:235420540 | ENSG00000054267.16 | ENST00000349213.3,ENST00000366603.2,ENST00000264183.3,ENST00000421364.1,ENST00000491632.1,ENST00000418304.1,ENST00000466653.1 |
| PSI values of skipped exons in GTEx. |
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| * Skipped exon sequences. |
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Open reading frame (ORF) annotation in the exon skipping event for ARID4B |
| Open reading frame (ORF) of individual exon skipping events in TCGA based on the Ensembl gene structure combined from isoforms. |
| ENST | Start of skipped exon | End of skipped exon | ORF |
| ENST00000264183 | 235357327 | 235357526 | Frame-shift |
| ENST00000366603 | 235357327 | 235357526 | Frame-shift |
| ENST00000264183 | 235394427 | 235394504 | Frame-shift |
| ENST00000366603 | 235394427 | 235394504 | Frame-shift |
| ENST00000264183 | 235397727 | 235397807 | Frame-shift |
| ENST00000366603 | 235397727 | 235397807 | Frame-shift |
| ENST00000264183 | 235403627 | 235403766 | Frame-shift |
| ENST00000366603 | 235403627 | 235403766 | Frame-shift |
| ENST00000264183 | 235418974 | 235419065 | Frame-shift |
| ENST00000366603 | 235418974 | 235419065 | Frame-shift |
| ENST00000264183 | 235335932 | 235336079 | In-frame |
| ENST00000366603 | 235335932 | 235336079 | In-frame |
| ENST00000264183 | 235341114 | 235341228 | In-frame |
| ENST00000366603 | 235341114 | 235341228 | In-frame |
| ENST00000264183 | 235377083 | 235377341 | In-frame |
| ENST00000366603 | 235377083 | 235377341 | In-frame |
| ENST00000264183 | 235420474 | 235420540 | In-frame |
| ENST00000366603 | 235420474 | 235420540 | In-frame |
| Open reading frame (ORF) of individual exon skipping events in GTEx based on the Ensembl gene structure combined from isoforms. |
| ENST | Start of skipped exon | End of skipped exon | ORF |
| ENST00000264183 | 235357327 | 235357526 | Frame-shift |
| ENST00000366603 | 235357327 | 235357526 | Frame-shift |
| ENST00000264183 | 235394427 | 235394504 | Frame-shift |
| ENST00000366603 | 235394427 | 235394504 | Frame-shift |
| ENST00000264183 | 235397727 | 235397807 | Frame-shift |
| ENST00000366603 | 235397727 | 235397807 | Frame-shift |
| ENST00000264183 | 235403627 | 235403766 | Frame-shift |
| ENST00000366603 | 235403627 | 235403766 | Frame-shift |
| ENST00000264183 | 235418974 | 235419065 | Frame-shift |
| ENST00000366603 | 235418974 | 235419065 | Frame-shift |
| ENST00000264183 | 235335932 | 235336079 | In-frame |
| ENST00000366603 | 235335932 | 235336079 | In-frame |
| ENST00000264183 | 235341114 | 235341228 | In-frame |
| ENST00000366603 | 235341114 | 235341228 | In-frame |
| ENST00000264183 | 235377083 | 235377341 | In-frame |
| ENST00000366603 | 235377083 | 235377341 | In-frame |
| ENST00000264183 | 235420474 | 235420540 | In-frame |
| ENST00000366603 | 235420474 | 235420540 | In-frame |
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Infer the effects of exon skipping event on protein functional features for ARID4B |
| Exon skipping at the protein sequence level and followed lost functional features. * Click on the image to enlarge it in a new window. |
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| Loci of skipped exons in TCGA across genomic, transcript, and protein sequence levels of In-frame cases. |
| ENST | Length of mRNA | Length of AA seq. | Genomic start | Genomic end | mRNA start | mRNA end | AA start | AA end |
| ENST00000264183 | 6084 | 1312 | 235420474 | 235420540 | 616 | 681 | 39 | 61 |
| ENST00000366603 | 5963 | 1312 | 235420474 | 235420540 | 495 | 560 | 39 | 61 |
| ENST00000264183 | 6084 | 1312 | 235377083 | 235377341 | 2082 | 2339 | 528 | 613 |
| ENST00000366603 | 5963 | 1312 | 235377083 | 235377341 | 1961 | 2218 | 528 | 613 |
| ENST00000264183 | 6084 | 1312 | 235341114 | 235341228 | 3833 | 3946 | 1111 | 1149 |
| ENST00000366603 | 5963 | 1312 | 235341114 | 235341228 | 3712 | 3825 | 1111 | 1149 |
| ENST00000264183 | 6084 | 1312 | 235335932 | 235336079 | 4163 | 4309 | 1221 | 1270 |
| ENST00000366603 | 5963 | 1312 | 235335932 | 235336079 | 4042 | 4188 | 1221 | 1270 |
| Loci of skipped exons in GTEx across genomic, transcript, and protein sequence levels of In-frame cases. |
| ENST | Length of mRNA | Length of AA seq. | Genomic start | Genomic end | mRNA start | mRNA end | AA start | AA end |
| ENST00000264183 | 6084 | 1312 | 235420474 | 235420540 | 616 | 681 | 39 | 61 |
| ENST00000366603 | 5963 | 1312 | 235420474 | 235420540 | 495 | 560 | 39 | 61 |
| ENST00000264183 | 6084 | 1312 | 235377083 | 235377341 | 2082 | 2339 | 528 | 613 |
| ENST00000366603 | 5963 | 1312 | 235377083 | 235377341 | 1961 | 2218 | 528 | 613 |
| ENST00000264183 | 6084 | 1312 | 235341114 | 235341228 | 3833 | 3946 | 1111 | 1149 |
| ENST00000366603 | 5963 | 1312 | 235341114 | 235341228 | 3712 | 3825 | 1111 | 1149 |
| ENST00000264183 | 6084 | 1312 | 235335932 | 235336079 | 4163 | 4309 | 1221 | 1270 |
| ENST00000366603 | 5963 | 1312 | 235335932 | 235336079 | 4042 | 4188 | 1221 | 1270 |
| Lost protein functional features of individual exon skipping events in TCGA. |
| UniProt acc. | Start of exon skipping (AA) | End of exon skipping (AA) | Protein feature start (AA) | Protein feature end (AA) | Category of protein feature | Description of feature |
| Lost protein functional features of individual exon skipping events in GTEx. |
| UniProt acc. | Start of exon skipping (AA) | End of exon skipping (AA) | Protein feature start (AA) | Protein feature end (AA) | Category of protein feature | Description of feature |
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SNVs in the skipped exons for ARID4B |
| - Lollipop plot for presenting exon skipping associated SNVs. * Click on the image to enlarge it in a new window. |
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| - Differential PSIs between mutated versus non-mutated samples. |
| - Non-synonymous mutations located in the skipped exons in TCGA. |
| Cancer type | Sample | ESID | Skipped exon start | Skipped exon end | Mutation start | Mutation end | Mutation type | Reference seq | Mutation seq | AAchange |
| UCEC | TCGA-A5-A0GH-01 | exon_skip_38246 | 235335933 | 235336079 | 235335991 | 235335991 | Frame_Shift_Del | T | - | p.K1251fs |
| UCEC | TCGA-B5-A0JZ-01 | exon_skip_38254 | 235341115 | 235341228 | 235341129 | 235341129 | Frame_Shift_Del | T | - | p.K1145fs |
| LIHC | TCGA-DD-A39Y-01 | exon_skip_38257 | 235357328 | 235357526 | 235357477 | 235357477 | Frame_Shift_Del | T | - | p.N659fs |
| LIHC | TCGA-G3-A3CJ-01 | exon_skip_38257 | 235357328 | 235357526 | 235357477 | 235357477 | Frame_Shift_Del | T | - | p.N659fs |
| LIHC | TCGA-DD-A3A0-01 | exon_skip_38258 | 235377084 | 235377341 | 235377115 | 235377115 | Frame_Shift_Del | A | - | p.Y604fs |
| LIHC | TCGA-G3-A3CJ-01 | exon_skip_38259 | 235394428 | 235394504 | 235394451 | 235394451 | Frame_Shift_Del | T | - | p.K240fs |
| KIRC | TCGA-B2-3924-01 | exon_skip_38265 | 235420475 | 235420540 | 235420512 | 235420512 | Frame_Shift_Del | A | - | p.V49fs |
| LIHC | TCGA-BC-A112-01 | exon_skip_38246 | 235335933 | 235336079 | 235335942 | 235335943 | Frame_Shift_Ins | - | T | p.E1268fs |
| COAD | TCGA-AA-3713-01 | exon_skip_38257 | 235357328 | 235357526 | 235357476 | 235357477 | Frame_Shift_Ins | - | T | p.N573fs |
| STAD | TCGA-HU-A4GT-01 | exon_skip_38257 | 235357328 | 235357526 | 235357476 | 235357477 | Frame_Shift_Ins | - | T | p.N659fs |
| STAD | TCGA-HU-A4GT-01 | exon_skip_38257 | 235357328 | 235357526 | 235357477 | 235357478 | Frame_Shift_Ins | - | T | p.N659fs |
| UCEC | TCGA-D1-A17Q-01 | exon_skip_38257 | 235357328 | 235357526 | 235357358 | 235357358 | Nonsense_Mutation | C | A | p.E699* |
| LUAD | TCGA-05-5428-01 | exon_skip_38258 | 235377084 | 235377341 | 235377133 | 235377133 | Nonsense_Mutation | C | A | p.E598* |
| ACC | TCGA-OR-A5JV-01 | exon_skip_38258 | 235377084 | 235377341 | 235377221 | 235377221 | Nonsense_Mutation | G | T | p.C568* |
| UCEC | TCGA-B5-A11E-01 | exon_skip_38258 | 235377084 | 235377341 | 235377221 | 235377221 | Nonsense_Mutation | G | T | p.C568* |
| STAD | TCGA-VQ-A8P2-01 | exon_skip_38260 | 235397728 | 235397807 | 235397750 | 235397750 | Nonsense_Mutation | G | A | p.R215* |
| BLCA | TCGA-BT-A0YX-01 | exon_skip_38257 | 235357328 | 235357526 | 235357527 | 235357527 | Splice_Site | C | G | p.N643_splice |
| COAD | TCGA-F4-6856-01 | exon_skip_38259 | 235394428 | 235394504 | 235394506 | 235394507 | Splice_Site | TA | - | . |
| STAD | TCGA-CG-4442-01 | exon_skip_38259 | 235394428 | 235394504 | 235394506 | 235394507 | Splice_Site | TA | - | . |
| STAD | TCGA-CG-4442-01 | exon_skip_38259 | 235394428 | 235394504 | 235394506 | 235394507 | Splice_Site | TA | - | p.F222_splice |
| LUAD | TCGA-05-5428-01 | exon_skip_38263 | 235418975 | 235419065 | 235418974 | 235418975 | Splice_Site | CC | AA | p.V92_splice |
| - Depth of coverage in the three exons composing exon skipping event |
| Depth of coverage in three exons | Mutation description |
| - Non-synonymous mutations located in the skipped exons in CCLE. |
| Sample | Skipped exon start | Skipped exon end | Mutation start | Mutation end | Mutation type | Reference seq | Mutation seq | AAchange |
| REH_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 235357328 | 235357526 | 235357477 | 235357477 | Frame_Shift_Del | T | - | p.N659fs |
| JURKAT_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 235397728 | 235397807 | 235397767 | 235397767 | Frame_Shift_Del | T | - | p.K209fs |
| EN_ENDOMETRIUM | 235341115 | 235341228 | 235341170 | 235341171 | Frame_Shift_Ins | - | T | p.K1131fs |
| CL34_LARGE_INTESTINE | 235357328 | 235357526 | 235357476 | 235357477 | Frame_Shift_Ins | - | T | p.N659fs |
| EN_ENDOMETRIUM | 235357328 | 235357526 | 235357476 | 235357477 | Frame_Shift_Ins | - | T | p.N659fs |
| BC3C_URINARY_TRACT | 235357328 | 235357526 | 235357476 | 235357477 | Frame_Shift_Ins | - | T | p.N659fs |
| CI1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 235357328 | 235357526 | 235357476 | 235357477 | Frame_Shift_Ins | - | T | p.N659fs |
| EPLC272H_LUNG | 235357328 | 235357526 | 235357476 | 235357477 | Frame_Shift_Ins | - | T | p.N659fs |
| HDMYZ_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 235357328 | 235357526 | 235357476 | 235357477 | Frame_Shift_Ins | - | T | p.N659fs |
| HS616T_FIBROBLAST | 235357328 | 235357526 | 235357476 | 235357477 | Frame_Shift_Ins | - | T | p.N659fs |
| MELJUSO_SKIN | 235357328 | 235357526 | 235357476 | 235357477 | Frame_Shift_Ins | - | T | p.N659fs |
| MORCPR_LUNG | 235357328 | 235357526 | 235357476 | 235357477 | Frame_Shift_Ins | - | T | p.N659fs |
| NCIH2444_LUNG | 235357328 | 235357526 | 235357476 | 235357477 | Frame_Shift_Ins | - | T | p.N659fs |
| U937_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 235357328 | 235357526 | 235357476 | 235357477 | Frame_Shift_Ins | - | T | p.N659fs |
| UACC62_SKIN | 235377084 | 235377341 | 235377165 | 235377166 | Frame_Shift_Ins | - | T | p.M587fs |
| BICR18_UPPER_AERODIGESTIVE_TRACT | 235377084 | 235377341 | 235377276 | 235377277 | Frame_Shift_Ins | - | C | p.E550fs |
| WM2664_SKIN | 235335933 | 235336079 | 235336003 | 235336005 | In_Frame_Del | ATA | - | p.Y1247del |
| SKUT1_SOFT_TISSUE | 235341115 | 235341228 | 235341148 | 235341148 | Missense_Mutation | T | C | p.T1139A |
| BICR18_UPPER_AERODIGESTIVE_TRACT | 235341115 | 235341228 | 235341189 | 235341189 | Missense_Mutation | C | A | p.G1125V |
| BICR18_UPPER_AERODIGESTIVE_TRACT | 235341115 | 235341228 | 235341199 | 235341199 | Missense_Mutation | C | T | p.A1122T |
| HS606T_FIBROBLAST | 235357328 | 235357526 | 235357462 | 235357462 | Missense_Mutation | C | T | p.R664H |
| VMRCLCD_LUNG | 235357328 | 235357526 | 235357477 | 235357477 | Missense_Mutation | T | C | p.N659S |
| SKUT1_SOFT_TISSUE | 235357328 | 235357526 | 235357484 | 235357484 | Missense_Mutation | G | A | p.P657S |
| BICR18_UPPER_AERODIGESTIVE_TRACT | 235357328 | 235357526 | 235357501 | 235357501 | Missense_Mutation | T | C | p.K651R |
| HGC27_STOMACH | 235357328 | 235357526 | 235357511 | 235357511 | Missense_Mutation | C | G | p.E648Q |
| WM278_SKIN | 235357328 | 235357526 | 235357515 | 235357515 | Missense_Mutation | G | T | p.D646E |
| GP2D_LARGE_INTESTINE | 235377084 | 235377341 | 235377097 | 235377097 | Missense_Mutation | C | T | p.G610R |
| GP5D_LARGE_INTESTINE | 235377084 | 235377341 | 235377097 | 235377097 | Missense_Mutation | C | T | p.G610R |
| PF382_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 235377084 | 235377341 | 235377103 | 235377103 | Missense_Mutation | A | G | p.Y608H |
| DAUDI_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 235377084 | 235377341 | 235377120 | 235377120 | Missense_Mutation | A | G | p.V602A |
| DND41_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 235377084 | 235377341 | 235377120 | 235377120 | Missense_Mutation | A | G | p.V602A |
| BICR18_UPPER_AERODIGESTIVE_TRACT | 235377084 | 235377341 | 235377120 | 235377120 | Missense_Mutation | A | G | p.V602A |
| KARPAS231_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 235377084 | 235377341 | 235377193 | 235377193 | Missense_Mutation | G | A | p.R578W |
| DAUDI_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 235377084 | 235377341 | 235377300 | 235377301 | Missense_Mutation | GC | AT | p.A542I |
| SUPT11_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 235377084 | 235377341 | 235377309 | 235377309 | Missense_Mutation | T | A | p.D539V |
| SNUC5_LARGE_INTESTINE | 235394428 | 235394504 | 235394470 | 235394470 | Missense_Mutation | T | C | p.T234A |
| SNU175_LARGE_INTESTINE | 235403628 | 235403766 | 235403671 | 235403671 | Missense_Mutation | T | C | p.Y181C |
| HCC1438_LUNG | 235418975 | 235419065 | 235419038 | 235419038 | Missense_Mutation | G | C | p.L71V |
| HCC33_LUNG | 235418975 | 235419065 | 235419043 | 235419043 | Missense_Mutation | T | A | p.K69M |
| CAL148_BREAST | 235377084 | 235377341 | 235377092 | 235377092 | Nonsense_Mutation | C | T | p.W611* |
| NCIH1793_LUNG | 235377084 | 235377341 | 235377235 | 235377235 | Nonsense_Mutation | C | A | p.E564* |
| IGROV1_OVARY | 235397728 | 235397807 | 235397750 | 235397750 | Nonsense_Mutation | G | A | p.R215* |
| PCM6_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 235403628 | 235403766 | 235403641 | 235403641 | Nonsense_Mutation | C | T | p.W191* |
| NCIH661_LUNG | 235403628 | 235403766 | 235403766 | 235403766 | Splice_Site | T | A | p.I149I |
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Splicing Quantitative Trait Loci (sQTL) in the exon skipping event for ARID4B |
| sQTL information located at the skipped exons. |
| Exon skip ID | Chromosome | Three exons | Skippped exon | ENST | Cancer type | SNP id | Location | DNA change (ref/var) | P-value |
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Splicing Quantitative Trait Methylation (sQTM) in the skipped exon for ARID4B |
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Survival analysis of Splicing Quantitative Trait Methylation (sQTM) in the skipped exon for ARID4B |
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RelatedDrugs for ARID4B |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for ARID4B |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
| ARID4B | C0010606 | Adenoid Cystic Carcinoma | 1 | CTD_human |
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