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| Open reading frame (ORF) annotation in the exon skipping event |
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| Splicing Quantitative Trait Loci (sQTLs) in the skipped exons |
| Splicing Quantitative Trait Methylation (sQTM) in the skipped exon |
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Gene summary for GP2 |
 Gene summary |
| Gene information | Gene symbol | GP2 | Gene ID | 2813 |
| Gene name | glycoprotein 2 | |
| Synonyms | ZAP75 | |
| Cytomap | 16p12.3 | |
| Type of gene | protein-coding | |
| Description | pancreatic secretory granule membrane major glycoprotein GP2glycoprotein 2 (zymogen granule membrane)pancreatic zymogen granule membrane associated protein GP2 | |
| Modification date | 20180522 | |
| UniProtAcc | P55259 | |
| Context | PubMed: GP2 [Title/Abstract] AND exon [Title/Abstract] AND skip [Title/Abstract] - Title (PMID) |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
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Exon skipping events across known transcript of Ensembl for GP2 from UCSC genome browser |
| Skipped exons in TCGA and GTEx based on Ensembl gene isoform structure. * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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Gene isoform structures and expression levels for GP2 |
| Expression levels of gene isoforms across TCGA. |
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| Expression levels of gene isoforms across GTEx. |
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Exon skipping events with PSIs in TCGA for GP2 |
| Information of exkip skipping event in TCGA. |
| Exon skip ID | chr | Exons involved in exon skipping | Skipped exon | ENSG | ENSTs |
| exon_skip_142584 | 16 | 20327277:20327362:20328534:20328697:20329506:20329752 | 20328534:20328697 | ENSG00000169347.12 | ENST00000341642.5,ENST00000381362.4,ENST00000302555.5,ENST00000381360.5 |
| exon_skip_142590 | 16 | 20329723:20329752:20330941:20331090:20331583:20331652 | 20330941:20331090 | ENSG00000169347.12 | ENST00000573897.1,ENST00000341642.5,ENST00000381362.4,ENST00000302555.5,ENST00000381360.5 |
| exon_skip_142600 | 16 | 20331072:20331090:20331583:20331795:20334190:20334301 | 20331583:20331795 | ENSG00000169347.12 | ENST00000573897.1,ENST00000575582.1,ENST00000341642.5,ENST00000381362.4,ENST00000302555.5,ENST00000381360.5 |
| exon_skip_142602 | 16 | 20334190:20334301:20334702:20334711:20335137:20335578 | 20334702:20334711 | ENSG00000169347.12 | ENST00000381362.4 |
| exon_skip_142603 | 16 | 20334190:20334301:20334702:20334711:20337659:20337789 | 20334702:20334711 | ENSG00000169347.12 | ENST00000381360.5 |
| exon_skip_142604 | 16 | 20334190:20334301:20335137:20335383:20337659:20337789 | 20335137:20335383 | ENSG00000169347.12 | ENST00000572478.1 |
| exon_skip_142606 | 16 | 20334190:20334301:20335137:20335578:20337659:20337789 | 20335137:20335578 | ENSG00000169347.12 | ENST00000302555.5 |
| exon_skip_142607 | 16 | 20334702:20334711:20335137:20335578:20337659:20337789 | 20335137:20335578 | ENSG00000169347.12 | ENST00000381362.4 |
| PSI values of skipped exons in TCGA. |
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Exon skipping events with PSIs in GTEx for GP2 |
| Information of exkip skipping event in GTEx |
| Exon skip ID | chr | Exons involved in exon skipping | Skipped exon | ENSG | ENSTs |
| exon_skip_142584 | 16 | 20327277:20327362:20328534:20328697:20329506:20329752 | 20328534:20328697 | ENSG00000169347.12 | ENST00000302555.5,ENST00000341642.5,ENST00000381362.4,ENST00000381360.5 |
| exon_skip_142590 | 16 | 20329723:20329752:20330941:20331090:20331583:20331652 | 20330941:20331090 | ENSG00000169347.12 | ENST00000302555.5,ENST00000341642.5,ENST00000381362.4,ENST00000381360.5,ENST00000573897.1 |
| exon_skip_142600 | 16 | 20331072:20331090:20331583:20331795:20334190:20334301 | 20331583:20331795 | ENSG00000169347.12 | ENST00000302555.5,ENST00000341642.5,ENST00000381362.4,ENST00000381360.5,ENST00000573897.1,ENST00000575582.1 |
| exon_skip_142602 | 16 | 20334190:20334301:20334702:20334711:20335137:20335578 | 20334702:20334711 | ENSG00000169347.12 | ENST00000381362.4 |
| exon_skip_142603 | 16 | 20334190:20334301:20334702:20334711:20337659:20337789 | 20334702:20334711 | ENSG00000169347.12 | ENST00000381360.5 |
| exon_skip_142604 | 16 | 20334190:20334301:20335137:20335383:20337659:20337789 | 20335137:20335383 | ENSG00000169347.12 | ENST00000572478.1 |
| exon_skip_142606 | 16 | 20334190:20334301:20335137:20335578:20337659:20337789 | 20335137:20335578 | ENSG00000169347.12 | ENST00000302555.5 |
| exon_skip_142607 | 16 | 20334702:20334711:20335137:20335578:20337659:20337789 | 20335137:20335578 | ENSG00000169347.12 | ENST00000381362.4 |
| PSI values of skipped exons in GTEx. |
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| * Skipped exon sequences. |
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Open reading frame (ORF) annotation in the exon skipping event for GP2 |
| Open reading frame (ORF) of individual exon skipping events in TCGA based on the Ensembl gene structure combined from isoforms. |
| ENST | Start of skipped exon | End of skipped exon | ORF |
| ENST00000381362 | 20328534 | 20328697 | Frame-shift |
| ENST00000381362 | 20330941 | 20331090 | Frame-shift |
| ENST00000381362 | 20331583 | 20331795 | Frame-shift |
| ENST00000381362 | 20334702 | 20334711 | In-frame |
| ENST00000381362 | 20335137 | 20335578 | In-frame |
| Open reading frame (ORF) of individual exon skipping events in GTEx based on the Ensembl gene structure combined from isoforms. |
| ENST | Start of skipped exon | End of skipped exon | ORF |
| ENST00000381362 | 20328534 | 20328697 | Frame-shift |
| ENST00000381362 | 20330941 | 20331090 | Frame-shift |
| ENST00000381362 | 20331583 | 20331795 | Frame-shift |
| ENST00000381362 | 20334702 | 20334711 | In-frame |
| ENST00000381362 | 20335137 | 20335578 | In-frame |
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Infer the effects of exon skipping event on protein functional features for GP2 |
| Exon skipping at the protein sequence level and followed lost functional features. * Click on the image to enlarge it in a new window. |
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| Loci of skipped exons in TCGA across genomic, transcript, and protein sequence levels of In-frame cases. |
| ENST | Length of mRNA | Length of AA seq. | Genomic start | Genomic end | mRNA start | mRNA end | AA start | AA end |
| ENST00000381362 | 2442 | 537 | 20335137 | 20335578 | 172 | 612 | 31 | 178 |
| Loci of skipped exons in GTEx across genomic, transcript, and protein sequence levels of In-frame cases. |
| ENST | Length of mRNA | Length of AA seq. | Genomic start | Genomic end | mRNA start | mRNA end | AA start | AA end |
| ENST00000381362 | 2442 | 537 | 20335137 | 20335578 | 172 | 612 | 31 | 178 |
| Lost protein functional features of individual exon skipping events in TCGA. |
| UniProt acc. | Start of exon skipping (AA) | End of exon skipping (AA) | Protein feature start (AA) | Protein feature end (AA) | Category of protein feature | Description of feature |
| P55259 | 31 | 178 | 31 | 180 | Alternative sequence | ID=VSP_035749;Note=In isoform 2. Missing;Ontology_term=ECO:0000303;evidence=ECO:0000303|PubMed:10760606;Dbxref=PMID:10760606 |
| P55259 | 31 | 178 | 32 | 178 | Alternative sequence | ID=VSP_006948;Note=In isoform Beta. Missing;Ontology_term=ECO:0000303;evidence=ECO:0000303|Ref.5 |
| P55259 | 31 | 178 | 29 | 512 | Chain | ID=PRO_0000041657;Note=Pancreatic secretory granule membrane major glycoprotein GP2 |
| P55259 | 31 | 178 | 65 | 65 | Glycosylation | Note=N-linked (GlcNAc...) asparagine;Ontology_term=ECO:0000255;evidence=ECO:0000255 |
| P55259 | 31 | 178 | 122 | 122 | Glycosylation | Note=N-linked (GlcNAc...) asparagine;Ontology_term=ECO:0000255;evidence=ECO:0000255 |
| Lost protein functional features of individual exon skipping events in GTEx. |
| UniProt acc. | Start of exon skipping (AA) | End of exon skipping (AA) | Protein feature start (AA) | Protein feature end (AA) | Category of protein feature | Description of feature |
| P55259 | 31 | 178 | 31 | 180 | Alternative sequence | ID=VSP_035749;Note=In isoform 2. Missing;Ontology_term=ECO:0000303;evidence=ECO:0000303|PubMed:10760606;Dbxref=PMID:10760606 |
| P55259 | 31 | 178 | 32 | 178 | Alternative sequence | ID=VSP_006948;Note=In isoform Beta. Missing;Ontology_term=ECO:0000303;evidence=ECO:0000303|Ref.5 |
| P55259 | 31 | 178 | 29 | 512 | Chain | ID=PRO_0000041657;Note=Pancreatic secretory granule membrane major glycoprotein GP2 |
| P55259 | 31 | 178 | 65 | 65 | Glycosylation | Note=N-linked (GlcNAc...) asparagine;Ontology_term=ECO:0000255;evidence=ECO:0000255 |
| P55259 | 31 | 178 | 122 | 122 | Glycosylation | Note=N-linked (GlcNAc...) asparagine;Ontology_term=ECO:0000255;evidence=ECO:0000255 |
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SNVs in the skipped exons for GP2 |
| - Lollipop plot for presenting exon skipping associated SNVs. * Click on the image to enlarge it in a new window. |
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| - Differential PSIs between mutated versus non-mutated samples. |
| - Non-synonymous mutations located in the skipped exons in TCGA. |
| Cancer type | Sample | ESID | Skipped exon start | Skipped exon end | Mutation start | Mutation end | Mutation type | Reference seq | Mutation seq | AAchange |
| LIHC | TCGA-DD-A3A0-01 | exon_skip_142590 | 20330942 | 20331090 | 20331062 | 20331062 | Frame_Shift_Del | T | - | p.N296fs |
| LIHC | TCGA-G3-A3CJ-01 | exon_skip_142590 | 20330942 | 20331090 | 20331062 | 20331062 | Frame_Shift_Del | T | - | p.N296fs |
| LIHC | TCGA-DD-A1EG-01 | exon_skip_142600 | 20331584 | 20331795 | 20331703 | 20331703 | Frame_Shift_Del | C | - | p.E248fs |
| LIHC | TCGA-G3-A3CJ-01 | exon_skip_142600 | 20331584 | 20331795 | 20331758 | 20331758 | Frame_Shift_Del | G | - | p.P228fs |
| LIHC | TCGA-DD-A3A1-01 | exon_skip_142604 | 20335138 | 20335383 | 20335319 | 20335319 | Frame_Shift_Del | G | - | p.P118fs |
| LIHC | TCGA-DD-A3A1-01 | exon_skip_142606 exon_skip_142607 | 20335138 | 20335578 | 20335319 | 20335319 | Frame_Shift_Del | G | - | p.P118fs |
| LIHC | TCGA-DD-A1EG-01 | exon_skip_142606 exon_skip_142607 | 20335138 | 20335578 | 20335493 | 20335493 | Frame_Shift_Del | A | - | p.F60fs |
| LIHC | TCGA-DD-A3A0-01 | exon_skip_142606 exon_skip_142607 | 20335138 | 20335578 | 20335569 | 20335569 | Frame_Shift_Del | T | - | p.N35fs |
| COAD | TCGA-D5-6930-01 | exon_skip_142600 | 20331584 | 20331795 | 20331702 | 20331703 | Frame_Shift_Ins | - | C | p.E100fs |
| LIHC | TCGA-BC-A112-01 | exon_skip_142606 exon_skip_142607 | 20335138 | 20335578 | 20335409 | 20335410 | Frame_Shift_Ins | - | T | p.N88fs |
| SKCM | TCGA-FW-A3R5-06 | exon_skip_142584 | 20328535 | 20328697 | 20328687 | 20328687 | Nonsense_Mutation | G | A | p.Q422* |
| ACC | TCGA-OR-A5KB-01 | exon_skip_142600 | 20331584 | 20331795 | 20331586 | 20331586 | Nonsense_Mutation | C | A | p.E139X |
| ACC | TCGA-OR-A5KB-01 | exon_skip_142600 | 20331584 | 20331795 | 20331586 | 20331586 | Nonsense_Mutation | C | A | p.E286* |
| ACC | TCGA-OR-A5KB-01 | exon_skip_142600 | 20331584 | 20331795 | 20331586 | 20331586 | Nonsense_Mutation | C | A | p.E289X |
| LUAD | TCGA-17-Z014-01 | exon_skip_142600 | 20331584 | 20331795 | 20331682 | 20331682 | Nonsense_Mutation | G | A | p.R254* |
| UCEC | TCGA-AX-A0J0-01 | exon_skip_142600 | 20331584 | 20331795 | 20331754 | 20331754 | Nonsense_Mutation | C | A | p.E233* |
| KIRC | TCGA-BP-5183-01 | exon_skip_142600 | 20331584 | 20331795 | 20331781 | 20331781 | Nonsense_Mutation | G | A | p.Q221* |
| KIRC | TCGA-BP-5183-01 | exon_skip_142600 | 20331584 | 20331795 | 20331781 | 20331781 | Nonsense_Mutation | G | A | p.Q224X |
| READ | TCGA-F5-6814-01 | exon_skip_142590 | 20330942 | 20331090 | 20331091 | 20331091 | Splice_Site | C | A | . |
| UCS | TCGA-QN-A5NN-01 | exon_skip_142590 | 20330942 | 20331090 | 20331092 | 20331092 | Splice_Site | T | C | . |
| - Depth of coverage in the three exons composing exon skipping event |
| Depth of coverage in three exons | Mutation description |
 | Sample: TCGA-BC-A112-01 |
| Cancer type: LIHC | |
| ESID: exon_skip_142607 | |
| Skipped exon start: 20335138 | |
| Skipped exon end: 20335578 | |
| Mutation start: 20335409 | |
| Mutation end: 20335410 | |
| Mutation type: Frame_Shift_Ins | |
| Reference seq: - | |
| Mutation seq: T | |
| AAchange: p.N88fs | |
exon_skip_114200_LIHC_TCGA-BC-A112-01.png | |
exon_skip_131894_LIHC_TCGA-BC-A112-01.png | |
exon_skip_135820_LIHC_TCGA-BC-A112-01.png | |
exon_skip_138911_LIHC_TCGA-BC-A112-01.png | |
exon_skip_141587_LIHC_TCGA-BC-A112-01.png | |
exon_skip_142606_LIHC_TCGA-BC-A112-01.png | |
exon_skip_146695_LIHC_TCGA-BC-A112-01.png | |
exon_skip_146697_LIHC_TCGA-BC-A112-01.png | |
exon_skip_152962_LIHC_TCGA-BC-A112-01.png | |
exon_skip_155765_LIHC_TCGA-BC-A112-01.png | |
exon_skip_1757_LIHC_TCGA-BC-A112-01.png | |
exon_skip_1879_LIHC_TCGA-BC-A112-01.png | |
exon_skip_1881_LIHC_TCGA-BC-A112-01.png | |
exon_skip_266_LIHC_TCGA-BC-A112-01.png | |
exon_skip_284527_LIHC_TCGA-BC-A112-01.png | |
exon_skip_286998_LIHC_TCGA-BC-A112-01.png | |
exon_skip_293546_LIHC_TCGA-BC-A112-01.png | |
exon_skip_293549_LIHC_TCGA-BC-A112-01.png | |
exon_skip_306900_LIHC_TCGA-BC-A112-01.png | |
exon_skip_311841_LIHC_TCGA-BC-A112-01.png | |
exon_skip_325884_LIHC_TCGA-BC-A112-01.png | |
exon_skip_326432_LIHC_TCGA-BC-A112-01.png | |
exon_skip_32825_LIHC_TCGA-BC-A112-01.png | |
exon_skip_331787_LIHC_TCGA-BC-A112-01.png | |
exon_skip_337208_LIHC_TCGA-BC-A112-01.png | |
exon_skip_337747_LIHC_TCGA-BC-A112-01.png | |
exon_skip_339045_LIHC_TCGA-BC-A112-01.png | |
exon_skip_344031_LIHC_TCGA-BC-A112-01.png | |
exon_skip_35548_LIHC_TCGA-BC-A112-01.png | |
exon_skip_35556_LIHC_TCGA-BC-A112-01.png | |
exon_skip_359720_LIHC_TCGA-BC-A112-01.png | |
exon_skip_37056_LIHC_TCGA-BC-A112-01.png | |
exon_skip_37483_LIHC_TCGA-BC-A112-01.png | |
exon_skip_37491_LIHC_TCGA-BC-A112-01.png | |
exon_skip_375724_LIHC_TCGA-BC-A112-01.png | |
exon_skip_378789_LIHC_TCGA-BC-A112-01.png | |
exon_skip_386291_LIHC_TCGA-BC-A112-01.png | |
exon_skip_41850_LIHC_TCGA-BC-A112-01.png | |
exon_skip_435931_LIHC_TCGA-BC-A112-01.png | |
exon_skip_436296_LIHC_TCGA-BC-A112-01.png | |
exon_skip_438393_LIHC_TCGA-BC-A112-01.png | |
exon_skip_443977_LIHC_TCGA-BC-A112-01.png | |
exon_skip_444190_LIHC_TCGA-BC-A112-01.png | |
exon_skip_44538_LIHC_TCGA-BC-A112-01.png | |
exon_skip_449944_LIHC_TCGA-BC-A112-01.png | |
exon_skip_458520_LIHC_TCGA-BC-A112-01.png | |
exon_skip_460075_LIHC_TCGA-BC-A112-01.png | |
exon_skip_472635_LIHC_TCGA-BC-A112-01.png | |
exon_skip_489149_LIHC_TCGA-BC-A112-01.png | |
exon_skip_492152_LIHC_TCGA-BC-A112-01.png | |
exon_skip_49506_LIHC_TCGA-BC-A112-01.png | |
exon_skip_5044_LIHC_TCGA-BC-A112-01.png | |
exon_skip_512559_LIHC_TCGA-BC-A112-01.png | |
exon_skip_514460_LIHC_TCGA-BC-A112-01.png | |
exon_skip_514990_LIHC_TCGA-BC-A112-01.png | |
exon_skip_55171_LIHC_TCGA-BC-A112-01.png | |
exon_skip_55175_LIHC_TCGA-BC-A112-01.png | |
exon_skip_56847_LIHC_TCGA-BC-A112-01.png | |
exon_skip_57586_LIHC_TCGA-BC-A112-01.png | |
exon_skip_57892_LIHC_TCGA-BC-A112-01.png | |
exon_skip_58035_LIHC_TCGA-BC-A112-01.png | |
exon_skip_6399_LIHC_TCGA-BC-A112-01.png | |
exon_skip_77132_LIHC_TCGA-BC-A112-01.png | |
| - Non-synonymous mutations located in the skipped exons in CCLE. |
| Sample | Skipped exon start | Skipped exon end | Mutation start | Mutation end | Mutation type | Reference seq | Mutation seq | AAchange |
| NCIH1666_LUNG | 20330942 | 20331090 | 20330950 | 20330950 | Frame_Shift_Del | G | - | p.P336fs |
| HCT116_LARGE_INTESTINE | 20328535 | 20328697 | 20328542 | 20328542 | Missense_Mutation | C | G | p.C473S |
| NAMALWA_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 20328535 | 20328697 | 20328542 | 20328542 | Missense_Mutation | C | G | p.C473S |
| NCIH716_LARGE_INTESTINE | 20328535 | 20328697 | 20328542 | 20328542 | Missense_Mutation | C | G | p.C473S |
| SNUC2B_LARGE_INTESTINE | 20328535 | 20328697 | 20328542 | 20328542 | Missense_Mutation | C | G | p.C473S |
| IMR5_AUTONOMIC_GANGLIA | 20328535 | 20328697 | 20328586 | 20328586 | Missense_Mutation | G | C | p.F458L |
| SNUC1_LARGE_INTESTINE | 20330942 | 20331090 | 20330981 | 20330981 | Missense_Mutation | A | T | p.M326K |
| MERO84_LUNG | 20330942 | 20331090 | 20330997 | 20330997 | Missense_Mutation | C | G | p.A321P |
| NCIH1688_LUNG | 20330942 | 20331090 | 20331022 | 20331023 | Missense_Mutation | GG | TT | p.T312K |
| P30OHK_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 20331584 | 20331795 | 20331633 | 20331633 | Missense_Mutation | A | G | p.V273A |
| MCC13_SKIN | 20331584 | 20331795 | 20331642 | 20331642 | Missense_Mutation | C | T | p.R270K |
| SUDHL4_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 20331584 | 20331795 | 20331649 | 20331649 | Missense_Mutation | C | G | p.E268Q |
| OV7_OVARY | 20331584 | 20331795 | 20331702 | 20331702 | Missense_Mutation | T | G | p.E250A |
| NCIH358_LUNG | 20331584 | 20331795 | 20331771 | 20331771 | Missense_Mutation | A | G | p.L227P |
| MUGCHOR1_BONE | 20335138 | 20335383 | 20335158 | 20335158 | Missense_Mutation | C | T | p.C172Y |
| MUGCHOR1_BONE | 20335138 | 20335578 | 20335158 | 20335158 | Missense_Mutation | C | T | p.C172Y |
| SNU1040_LARGE_INTESTINE | 20335138 | 20335383 | 20335179 | 20335179 | Missense_Mutation | C | T | p.R165Q |
| SNU1040_LARGE_INTESTINE | 20335138 | 20335578 | 20335179 | 20335179 | Missense_Mutation | C | T | p.R165Q |
| DU145_PROSTATE | 20335138 | 20335383 | 20335207 | 20335207 | Missense_Mutation | C | A | p.A156S |
| DU145_PROSTATE | 20335138 | 20335578 | 20335207 | 20335207 | Missense_Mutation | C | A | p.A156S |
| SNUC5_LARGE_INTESTINE | 20335138 | 20335383 | 20335257 | 20335257 | Missense_Mutation | G | A | p.A139V |
| SNUC5_LARGE_INTESTINE | 20335138 | 20335578 | 20335257 | 20335257 | Missense_Mutation | G | A | p.A139V |
| SKNDZ_AUTONOMIC_GANGLIA | 20335138 | 20335383 | 20335282 | 20335282 | Missense_Mutation | C | T | p.G131S |
| SKNDZ_AUTONOMIC_GANGLIA | 20335138 | 20335578 | 20335282 | 20335282 | Missense_Mutation | C | T | p.G131S |
| KYSE410_OESOPHAGUS | 20335138 | 20335383 | 20335285 | 20335285 | Missense_Mutation | C | A | p.D130Y |
| KYSE410_OESOPHAGUS | 20335138 | 20335578 | 20335285 | 20335285 | Missense_Mutation | C | A | p.D130Y |
| MEWO_SKIN | 20335138 | 20335383 | 20335290 | 20335290 | Missense_Mutation | A | T | p.L128H |
| MEWO_SKIN | 20335138 | 20335578 | 20335290 | 20335290 | Missense_Mutation | A | T | p.L128H |
| HS611T_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 20335138 | 20335383 | 20335300 | 20335300 | Missense_Mutation | G | A | p.H125Y |
| HS611T_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 20335138 | 20335578 | 20335300 | 20335300 | Missense_Mutation | G | A | p.H125Y |
| NCIH358_LUNG | 20335138 | 20335578 | 20335406 | 20335406 | Missense_Mutation | C | G | p.M89I |
| D263MG_CENTRAL_NERVOUS_SYSTEM | 20335138 | 20335578 | 20335452 | 20335452 | Missense_Mutation | C | T | p.R74Q |
| JHUEM7_ENDOMETRIUM | 20335138 | 20335578 | 20335551 | 20335551 | Missense_Mutation | G | A | p.S41L |
| DAUDI_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 20335138 | 20335383 | 20335190 | 20335190 | Nonsense_Mutation | G | T | p.Y161* |
| DAUDI_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 20335138 | 20335578 | 20335190 | 20335190 | Nonsense_Mutation | G | T | p.Y161* |
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Splicing Quantitative Trait Loci (sQTL) in the exon skipping event for GP2 |
| sQTL information located at the skipped exons. |
| Exon skip ID | Chromosome | Three exons | Skippped exon | ENST | Cancer type | SNP id | Location | DNA change (ref/var) | P-value |
| exon_skip_142584 | 16 | 20327277:20327362:20328534:20328697:20329506:20329752 | 20328534:20328697 | ENST00000341642.5,ENST00000381362.4,ENST00000302555.5,ENST00000381360.5 | PRAD | rs1129818 | chr16:20328685 | T/C | 2.87e-04 |
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Splicing Quantitative Trait Methylation (sQTM) in the skipped exon for GP2 |
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Survival analysis of Splicing Quantitative Trait Methylation (sQTM) in the skipped exon for GP2 |
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RelatedDrugs for GP2 |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for GP2 |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
| GP2 | C0005910 | Body Weight | 1 | CTD_human |
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