ExonSkipDB: functional annotation of exon skipping event in human

Gene summary for SUN1

Gene summary

Gene information	Gene symbol	SUN1
	Gene ID	23353
	Gene name	Sad1 and UNC84 domain containing 1
	Synonyms	UNC84A
	Cytomap	7p22.3
	Type of gene	protein-coding
	Description	SUN domain-containing protein 1Sad1 unc-84 domain protein 1protein unc-84 homolog Asad1/unc-84 protein-like 1unc-84 homolog A
	Modification date	20180523
	UniProtAcc	O94901
	Context	PubMed: SUN1 [Title/Abstract] AND exon [Title/Abstract] AND skip [Title/Abstract] - Title (PMID)

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
SUN1	GO:0090286	cytoskeletal anchoring at nuclear membrane	18396275
SUN1	GO:0090292	nuclear matrix anchoring at nuclear membrane	18396275

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Exon skipping events across known transcript of Ensembl for SUN1 from UCSC genome browser

Skipped exons in TCGA and GTEx based on Ensembl gene isoform structure.
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

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Gene isoform structures and expression levels for SUN1

Expression levels of gene isoforms across TCGA.

Expression levels of gene isoforms across GTEx.

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Exon skipping events with PSIs in TCGA for SUN1

Information of exkip skipping event in TCGA.

Exon skip ID	chr	Exons involved in exon skipping	Skipped exon	ENSG	ENSTs
exon_skip_463649	7	856279:856310:856916:857136:872141:872238	856916:857136	ENSG00000164828.13	ENST00000440380.1,ENST00000457378.2
exon_skip_463651	7	856279:856310:871656:871738:872141:872238	871656:871738	ENSG00000164828.13	ENST00000435699.1
exon_skip_463653	7	856279:856310:872141:872238:878434:878623	872141:872238	ENSG00000164828.13	ENST00000456758.2,ENST00000452783.2,ENST00000450538.1
exon_skip_463656	7	856279:856310:878434:878623:881582:881656	878434:878623	ENSG00000164828.13	ENST00000389574.3,ENST00000427969.1
exon_skip_463661	7	856391:856508:871656:871738:872141:872238	871656:871738	ENSG00000164828.13	ENST00000439679.1
exon_skip_463662	7	856916:857136:871656:871738:872141:872238	871656:871738	ENSG00000164828.13	ENST00000424128.1
exon_skip_463666	7	872143:872238:878434:878623:881582:881656	878434:878623	ENSG00000164828.13	ENST00000457598.1,ENST00000403868.1,ENST00000456758.2,ENST00000421580.1,ENST00000405266.1,ENST00000457378.2,ENST00000413171.2,ENST00000467483.1,ENST00000439679.1,ENST00000435699.1,ENST00000340926.3,ENST00000452783.2,ENST00000401592.1,ENST00000425407.2,ENS
exon_skip_463669	7	881582:881767:882842:882869:882977:883022	882842:882869	ENSG00000164828.13	ENST00000477950.1,ENST00000403868.1,ENST00000456758.2,ENST00000405266.1,ENST00000389574.3,ENST00000457378.2,ENST00000493681.1,ENST00000413171.2,ENST00000467483.1,ENST00000435699.1,ENST00000340926.3,ENST00000401592.1,ENST00000425407.2
exon_skip_463685	7	882842:882869:882977:883157:888054:888058	882977:883157	ENSG00000164828.13	ENST00000471349.1,ENST00000456758.2,ENST00000493681.1,ENST00000413171.2,ENST00000340926.3
exon_skip_463686	7	883006:883157:888054:888252:889156:889240	888054:888252	ENSG00000164828.13	ENST00000456758.2,ENST00000429178.1,ENST00000413171.2,ENST00000340926.3
exon_skip_463701	7	883006:883157:889156:889240:889559:889670	889156:889240	ENSG00000164828.13	ENST00000419312.1
exon_skip_463709	7	883006:883157:889559:889670:891020:891118	889559:889670	ENSG00000164828.13	ENST00000405266.1
exon_skip_463713	7	883006:883157:891020:891119:891586:891680	891020:891119	ENSG00000164828.13	ENST00000401592.1
exon_skip_463715	7	888244:888252:889156:889240:889559:889670	889156:889240	ENSG00000164828.13	ENST00000433212.1,ENST00000456758.2,ENST00000413171.2
exon_skip_463716	7	888244:888252:889156:889240:891020:891118	889156:889240	ENSG00000164828.13	ENST00000429178.1
exon_skip_463717	7	888244:888252:889156:889240:891586:891680	889156:889240	ENSG00000164828.13	ENST00000413514.2
exon_skip_463735	7	889156:889240:889559:889670:891020:891118	889559:889670	ENSG00000164828.13	ENST00000433212.1,ENST00000456758.2,ENST00000419312.1,ENST00000413171.2
exon_skip_463739	7	889156:889240:891020:891119:891586:891680	891020:891119	ENSG00000164828.13	ENST00000429178.1
exon_skip_463741	7	889559:889670:891020:891119:891586:891680	891020:891119	ENSG00000164828.13	ENST00000480475.1,ENST00000433212.1,ENST00000456758.2,ENST00000405266.1,ENST00000413171.2,ENST00000464442.1
exon_skip_463743	7	893045:893255:894556:894643:895994:896038	894556:894643	ENSG00000164828.13	ENST00000433212.1,ENST00000456758.2,ENST00000405266.1,ENST00000429178.1,ENST00000389574.3,ENST00000413171.2,ENST00000452783.2,ENST00000475971.1,ENST00000401592.1,ENST00000425407.2
exon_skip_463746	7	895994:896038:897464:897594:899764:900019	897464:897594	ENSG00000164828.13	ENST00000457861.1,ENST00000433212.1,ENST00000456758.2,ENST00000405266.1,ENST00000429178.1,ENST00000389574.3,ENST00000413171.2,ENST00000413514.2,ENST00000452783.2,ENST00000475971.1,ENST00000401592.1,ENST00000425407.2
exon_skip_463747	7	901016:901101:905588:905704:908985:909153	905588:905704	ENSG00000164828.13	ENST00000433212.1,ENST00000456758.2,ENST00000405266.1,ENST00000429178.1,ENST00000389574.3,ENST00000413171.2,ENST00000413514.2,ENST00000452783.2,ENST00000475971.1,ENST00000401592.1,ENST00000425407.2
exon_skip_463753	7	905588:905704:908985:909153:912106:912199	908985:909153	ENSG00000164828.13	ENST00000433212.1,ENST00000456758.2,ENST00000405266.1,ENST00000429178.1,ENST00000389574.3,ENST00000413171.2,ENST00000413514.2,ENST00000452783.2,ENST00000475971.1,ENST00000401592.1,ENST00000425407.2
exon_skip_463756	7	908985:909153:912106:912199:912851:913026	912106:912199	ENSG00000164828.13	ENST00000433212.1,ENST00000456758.2,ENST00000405266.1,ENST00000429178.1,ENST00000389574.3,ENST00000413171.2,ENST00000413514.2,ENST00000452783.2,ENST00000497943.1,ENST00000475971.1,ENST00000401592.1,ENST00000425407.2

PSI values of skipped exons in TCGA.

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Exon skipping events with PSIs in GTEx for SUN1

Information of exkip skipping event in GTEx

Exon skip ID	chr	Exons involved in exon skipping	Skipped exon	ENSG	ENSTs
exon_skip_463649	7	856279:856310:856916:857136:872141:872238	856916:857136	ENSG00000164828.13	ENST00000457378.2,ENST00000440380.1
exon_skip_463651	7	856279:856310:871656:871738:872141:872238	871656:871738	ENSG00000164828.13	ENST00000435699.1
exon_skip_463653	7	856279:856310:872141:872238:878434:878623	872141:872238	ENSG00000164828.13	ENST00000456758.2,ENST00000450538.1,ENST00000452783.2
exon_skip_463656	7	856279:856310:878434:878623:881582:881656	878434:878623	ENSG00000164828.13	ENST00000427969.1,ENST00000389574.3
exon_skip_463661	7	856391:856508:871656:871738:872141:872238	871656:871738	ENSG00000164828.13	ENST00000439679.1
exon_skip_463662	7	856916:857136:871656:871738:872141:872238	871656:871738	ENSG00000164828.13	ENST00000424128.1
exon_skip_463666	7	872143:872238:878434:878623:881582:881656	878434:878623	ENSG00000164828.13	ENST00000456758.2,ENST00000450538.1,ENST00000457378.2,ENST00000452783.2,ENST00000435699.1,ENST00000439679.1,ENST00000457598.1,ENST00000421580.1,ENST00000340926.3,ENST00000405266.1,ENST00000413171.2,ENST00000401592.1,ENST00000403868.1,ENST00000467483.1,ENS
exon_skip_463669	7	881582:881767:882842:882869:882977:883022	882842:882869	ENSG00000164828.13	ENST00000456758.2,ENST00000389574.3,ENST00000457378.2,ENST00000435699.1,ENST00000340926.3,ENST00000405266.1,ENST00000413171.2,ENST00000401592.1,ENST00000403868.1,ENST00000467483.1,ENST00000425407.2,ENST00000493681.1,ENST00000477950.1
exon_skip_463685	7	882842:882869:882977:883157:888054:888058	882977:883157	ENSG00000164828.13	ENST00000456758.2,ENST00000340926.3,ENST00000413171.2,ENST00000493681.1,ENST00000471349.1
exon_skip_463686	7	883006:883157:888054:888252:889156:889240	888054:888252	ENSG00000164828.13	ENST00000456758.2,ENST00000340926.3,ENST00000413171.2,ENST00000429178.1
exon_skip_463701	7	883006:883157:889156:889240:889559:889670	889156:889240	ENSG00000164828.13	ENST00000419312.1
exon_skip_463709	7	883006:883157:889559:889670:891020:891118	889559:889670	ENSG00000164828.13	ENST00000405266.1
exon_skip_463713	7	883006:883157:891020:891119:891586:891680	891020:891119	ENSG00000164828.13	ENST00000401592.1
exon_skip_463715	7	888244:888252:889156:889240:889559:889670	889156:889240	ENSG00000164828.13	ENST00000456758.2,ENST00000413171.2,ENST00000433212.1
exon_skip_463716	7	888244:888252:889156:889240:891020:891118	889156:889240	ENSG00000164828.13	ENST00000429178.1
exon_skip_463717	7	888244:888252:889156:889240:891586:891680	889156:889240	ENSG00000164828.13	ENST00000413514.2
exon_skip_463735	7	889156:889240:889559:889670:891020:891118	889559:889670	ENSG00000164828.13	ENST00000456758.2,ENST00000413171.2,ENST00000419312.1,ENST00000433212.1
exon_skip_463739	7	889156:889240:891020:891119:891586:891680	891020:891119	ENSG00000164828.13	ENST00000429178.1
exon_skip_463741	7	889559:889670:891020:891119:891586:891680	891020:891119	ENSG00000164828.13	ENST00000456758.2,ENST00000405266.1,ENST00000413171.2,ENST00000433212.1,ENST00000464442.1,ENST00000480475.1
exon_skip_463743	7	893045:893255:894556:894643:895994:896038	894556:894643	ENSG00000164828.13	ENST00000456758.2,ENST00000389574.3,ENST00000452783.2,ENST00000405266.1,ENST00000413171.2,ENST00000401592.1,ENST00000425407.2,ENST00000429178.1,ENST00000433212.1,ENST00000475971.1
exon_skip_463746	7	895994:896038:897464:897594:899764:900019	897464:897594	ENSG00000164828.13	ENST00000456758.2,ENST00000389574.3,ENST00000452783.2,ENST00000405266.1,ENST00000413171.2,ENST00000401592.1,ENST00000425407.2,ENST00000429178.1,ENST00000413514.2,ENST00000433212.1,ENST00000457861.1,ENST00000475971.1
exon_skip_463747	7	901016:901101:905588:905704:908985:909153	905588:905704	ENSG00000164828.13	ENST00000456758.2,ENST00000389574.3,ENST00000452783.2,ENST00000405266.1,ENST00000413171.2,ENST00000401592.1,ENST00000425407.2,ENST00000429178.1,ENST00000413514.2,ENST00000433212.1,ENST00000475971.1
exon_skip_463753	7	905588:905704:908985:909153:912106:912199	908985:909153	ENSG00000164828.13	ENST00000456758.2,ENST00000389574.3,ENST00000452783.2,ENST00000405266.1,ENST00000413171.2,ENST00000401592.1,ENST00000425407.2,ENST00000429178.1,ENST00000413514.2,ENST00000433212.1,ENST00000475971.1
exon_skip_463756	7	908985:909153:912106:912199:912851:913026	912106:912199	ENSG00000164828.13	ENST00000456758.2,ENST00000389574.3,ENST00000452783.2,ENST00000405266.1,ENST00000413171.2,ENST00000401592.1,ENST00000425407.2,ENST00000429178.1,ENST00000413514.2,ENST00000433212.1,ENST00000475971.1,ENST00000497943.1

PSI values of skipped exons in GTEx.

* Skipped exon sequences.

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Open reading frame (ORF) annotation in the exon skipping event for SUN1

Open reading frame (ORF) of individual exon skipping events in TCGA based on the Ensembl gene structure combined from isoforms.

ENST

Start of skipped exon

End of skipped exon

ORF

Open reading frame (ORF) of individual exon skipping events in GTEx based on the Ensembl gene structure combined from isoforms.

ENST

Start of skipped exon

End of skipped exon

ORF

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Infer the effects of exon skipping event on protein functional features for SUN1

Exon skipping at the protein sequence level and followed lost functional features.
* Click on the image to enlarge it in a new window.

Loci of skipped exons in TCGA across genomic, transcript, and protein sequence levels of In-frame cases.

ENST

Length of mRNA

Length of AA seq.

Genomic start

Genomic end

mRNA start

mRNA end

AA start

AA end

Loci of skipped exons in GTEx across genomic, transcript, and protein sequence levels of In-frame cases.

ENST

Length of mRNA

Length of AA seq.

Genomic start

Genomic end

mRNA start

mRNA end

AA start

AA end

Lost protein functional features of individual exon skipping events in TCGA.

UniProt acc.

Start of exon skipping (AA)

End of exon skipping (AA)

Protein feature start (AA)

Protein feature end (AA)

Category of protein feature

Description of feature

Lost protein functional features of individual exon skipping events in GTEx.

UniProt acc.

Start of exon skipping (AA)

End of exon skipping (AA)

Protein feature start (AA)

Protein feature end (AA)

Category of protein feature

Description of feature

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SNVs in the skipped exons for SUN1

- Lollipop plot for presenting exon skipping associated SNVs.
* Click on the image to enlarge it in a new window.

- Differential PSIs between mutated versus non-mutated samples.

SUN1_HNSC_exon_skip_463685_psi_boxplot.png
boxplot

SUN1_LUAD_exon_skip_463685_psi_boxplot.png
boxplot

SUN1_SKCM_exon_skip_463685_psi_boxplot.png
boxplot

- Non-synonymous mutations located in the skipped exons in TCGA.

Cancer type	Sample	ESID	Skipped exon start	Skipped exon end	Mutation start	Mutation end	Mutation type	Reference seq	Mutation seq	AAchange
LIHC	TCGA-DD-A3A0-01	exon_skip_463653	872142	872238	872167	872167	Frame_Shift_Del	T	-	p.D60fs
KIRC	TCGA-B8-5551-01	exon_skip_463656 exon_skip_463666	878435	878623	878492	878496	Frame_Shift_Del	ATTTG	-	p.66_67del
UCEC	TCGA-BS-A0UJ-01	exon_skip_463685	882978	883157	883046	883046	Frame_Shift_Del	T	-	p.F183fs
HNSC	TCGA-CN-6020-01	exon_skip_463685	882978	883157	883110	883110	Frame_Shift_Del	C	-	p.A204fs
HNSC	TCGA-CN-6020-01	exon_skip_463685	882978	883157	883110	883110	Frame_Shift_Del	C	-	p.A262fs
LIHC	TCGA-BC-A3KG-01	exon_skip_463747	905589	905704	905662	905662	Frame_Shift_Del	C	-	p.I835fs
SKCM	TCGA-EE-A2MR-06	exon_skip_463685	882978	883157	883151	883151	Nonsense_Mutation	C	T	p.Q218X
LUAD	TCGA-38-4631-01	exon_skip_463685	882978	883157	883154	883154	Nonsense_Mutation	A	T	p.K219*
LUAD	TCGA-38-4631-01	exon_skip_463685	882978	883157	883154	883154	Nonsense_Mutation	A	T	p.K277*
SKCM	TCGA-DA-A1IA-06	exon_skip_463686	888055	888252	888141	888141	Nonsense_Mutation	C	T	p.Q307*
LUAD	TCGA-99-7458-01	exon_skip_463753	908986	909153	909028	909028	Nonsense_Mutation	C	T	p.Q675*
LUAD	TCGA-99-7458-01	exon_skip_463753	908986	909153	909028	909028	Nonsense_Mutation	C	T	p.Q864*
LIHC	TCGA-BD-A3EP-01	exon_skip_463669	882843	882869	882841	882841	Splice_Site	A	G	.

- Depth of coverage in the three exons composing exon skipping event

Depth of coverage in three exons	Mutation description
	Sample: TCGA-38-4631-01
	Cancer type: LUAD
	ESID: exon_skip_463685
	Skipped exon start: 882978
	Skipped exon end: 883157
	Mutation start: 883154
	Mutation end: 883154
	Mutation type: Nonsense_Mutation
	Reference seq: A
	Mutation seq: T
	AAchange: p.K277*
	Sample: TCGA-38-4631-01
	Cancer type: LUAD
	ESID: exon_skip_463685
	Skipped exon start: 882978
	Skipped exon end: 883157
	Mutation start: 883154
	Mutation end: 883154
	Mutation type: Nonsense_Mutation
	Reference seq: A
	Mutation seq: T
	AAchange: p.K219*
exon_skip_121443_LUAD_TCGA-38-4631-01.png
exon_skip_463685_LUAD_TCGA-38-4631-01.png
exon_skip_480637_LUAD_TCGA-38-4631-01.png
	Sample: TCGA-EE-A2MR-06
	Cancer type: SKCM
	ESID: exon_skip_463685
	Skipped exon start: 882978
	Skipped exon end: 883157
	Mutation start: 883151
	Mutation end: 883151
	Mutation type: Nonsense_Mutation
	Reference seq: C
	Mutation seq: T
	AAchange: p.Q218X
exon_skip_108215_SKCM_TCGA-EE-A2MR-06.png
exon_skip_111144_SKCM_TCGA-EE-A2MR-06.png
exon_skip_124907_SKCM_TCGA-EE-A2MR-06.png
exon_skip_463685_SKCM_TCGA-EE-A2MR-06.png
exon_skip_8747_SKCM_TCGA-EE-A2MR-06.png
	Sample: TCGA-CN-6020-01
	Cancer type: HNSC
	ESID: exon_skip_463685
	Skipped exon start: 882978
	Skipped exon end: 883157
	Mutation start: 883110
	Mutation end: 883110
	Mutation type: Frame_Shift_Del
	Reference seq: C
	Mutation seq: -
	AAchange: p.A262fs
	Sample: TCGA-CN-6020-01
	Cancer type: HNSC
	ESID: exon_skip_463685
	Skipped exon start: 882978
	Skipped exon end: 883157
	Mutation start: 883110
	Mutation end: 883110
	Mutation type: Frame_Shift_Del
	Reference seq: C
	Mutation seq: -
	AAchange: p.A204fs
exon_skip_367496_HNSC_TCGA-CN-6020-01.png
exon_skip_435102_HNSC_TCGA-CN-6020-01.png
exon_skip_463685_HNSC_TCGA-CN-6020-01.png

- Non-synonymous mutations located in the skipped exons in CCLE.

Sample	Skipped exon start	Skipped exon end	Mutation start	Mutation end	Mutation type	Reference seq	Mutation seq	AAchange
GP2D_LARGE_INTESTINE	878435	878623	878515	878515	Missense_Mutation	G	A	p.R53H
GP5D_LARGE_INTESTINE	878435	878623	878515	878515	Missense_Mutation	G	A	p.R53H
HEP3B217_LIVER	878435	878623	878614	878614	Missense_Mutation	G	A	p.R86Q
PECAPJ49_UPPER_AERODIGESTIVE_TRACT	882843	882869	882849	882849	Missense_Mutation	A	G	p.D153G
SW948_LARGE_INTESTINE	882978	883157	883013	883013	Missense_Mutation	G	A	p.V172M
WM88_SKIN	882978	883157	883032	883032	Missense_Mutation	C	A	p.T178N
KM12_LARGE_INTESTINE	882978	883157	883044	883044	Missense_Mutation	G	A	p.G182D
HCC1143_BREAST	882978	883157	883074	883074	Missense_Mutation	C	T	p.S192F
HEC6_ENDOMETRIUM	882978	883157	883095	883095	Missense_Mutation	C	T	p.T199M
RKN_SOFT_TISSUE	882978	883157	883106	883106	Missense_Mutation	G	A	p.A203T
NCIH1734_LUNG	882978	883157	883109	883109	Missense_Mutation	G	A	p.A204T
MOLT4_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE	882978	883157	883160	883160	Missense_Mutation	A	G	p.K221E
NCIBL128_MATCHED_NORMAL_TISSUE	888055	888252	888117	888117	Missense_Mutation	T	C	p.S299P
NCIH128_LUNG	888055	888252	888117	888117	Missense_Mutation	T	C	p.S299P
EW7_BONE	888055	888252	888216	888216	Missense_Mutation	T	C	p.S332P
HO1U1_UPPER_AERODIGESTIVE_TRACT	888055	888252	888226	888226	Missense_Mutation	A	G	p.Y335C
D263MG_CENTRAL_NERVOUS_SYSTEM	889157	889240	889229	889229	Missense_Mutation	G	C	p.G368A
MEWO_SKIN	889560	889670	889565	889565	Missense_Mutation	G	A	p.D222N
SW1573_LUNG	889560	889670	889615	889615	Missense_Mutation	G	C	p.Q238H
HEC151_ENDOMETRIUM	889560	889670	889622	889622	Missense_Mutation	C	T	p.R241W
HEC59_ENDOMETRIUM	889560	889670	889667	889667	Missense_Mutation	G	A	p.A256T
UMUC1_URINARY_TRACT	891021	891119	891057	891057	Missense_Mutation	C	T	p.A269V
LIM1215_LARGE_INTESTINE	891021	891119	891081	891081	Missense_Mutation	C	T	p.T277M
SNU1040_LARGE_INTESTINE	891021	891119	891084	891084	Missense_Mutation	C	T	p.A278V
HEC108_ENDOMETRIUM	891021	891119	891107	891107	Missense_Mutation	G	A	p.V286M
YD15_SALIVARY_GLAND	894557	894643	894570	894570	Missense_Mutation	C	T	p.A463V
BC3_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE	897465	897594	897589	897589	Missense_Mutation	G	C	p.E544Q
MOLT16_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE	905589	905704	905610	905610	Missense_Mutation	G	A	p.R666H
HEC265_ENDOMETRIUM	905589	905704	905640	905640	Missense_Mutation	C	T	p.A676V
HEC59_ENDOMETRIUM	905589	905704	905661	905661	Missense_Mutation	T	C	p.I683T
ISHIKAWAHERAKLIO02ER_ENDOMETRIUM	905589	905704	905690	905690	Missense_Mutation	C	T	p.R693C
JHU028_LUNG	908986	909153	909064	909064	Missense_Mutation	C	A	p.H724N
COLO320_LARGE_INTESTINE	908986	909153	909065	909065	Missense_Mutation	A	C	p.H724P
RCCFG2_KIDNEY	908986	909153	909073	909073	Missense_Mutation	G	A	p.A727T
SNU1040_LARGE_INTESTINE	908986	909153	909073	909073	Missense_Mutation	G	A	p.A727T
FTC238_THYROID	912107	912199	912192	912192	Missense_Mutation	A	G	p.Q782R
MCC13_SKIN	888055	888252	888141	888141	Nonsense_Mutation	C	T	p.Q307*
KM12_LARGE_INTESTINE	905589	905704	905670	905670	Nonsense_Mutation	G	A	p.W686*
MDAMB175VII_BREAST	856917	857136	857136	857136	Splice_Site	G	A	p.V15I
HCC1569_BREAST	888055	888252	888056	888056	Splice_Site	C	T	p.C278C
KARPAS45_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE	888055	888252	888056	888056	Splice_Site	C	T	p.C278C
LNZTA3WT4_CENTRAL_NERVOUS_SYSTEM	889560	889670	889670	889670	Splice_Site	G	A	p.G257S

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Splicing Quantitative Trait Loci (sQTL) in the exon skipping event for SUN1

sQTL information located at the skipped exons.

Exon skip ID	Chromosome	Three exons	Skippped exon	ENST	Cancer type	SNP id	Location	DNA change (ref/var)	P-value
exon_skip_463716	7	888244:888252:889156:889240:891020:891118	889156:889240	ENST00000429178.1	ESCA	rs74742245	chr7:889169	A/G	1.40e-04
exon_skip_463716	7	888244:888252:889156:889240:891020:891118	889156:889240	ENST00000429178.1	HNSC	rs74742245	chr7:889169	A/G	2.75e-04
exon_skip_463716	7	888244:888252:889156:889240:891020:891118	889156:889240	ENST00000429178.1	BRCA	rs74742245	chr7:889169	A/G	5.38e-09
exon_skip_463716	7	888244:888252:889156:889240:891020:891118	889156:889240	ENST00000429178.1	LGG	rs74742245	chr7:889169	A/G	6.65e-09
exon_skip_463716	7	888244:888252:889156:889240:891020:891118	889156:889240	ENST00000429178.1	LGG	rs74742245	chr7:889169	A/G	6.73e-09
exon_skip_463716	7	888244:888252:889156:889240:891020:891118	889156:889240	ENST00000429178.1	LGG	rs74742245	chr7:889169	A/G	2.23e-04
exon_skip_463716	7	888244:888252:889156:889240:891020:891118	889156:889240	ENST00000429178.1	LGG	rs74742245	chr7:889169	A/G	1.22e-03
exon_skip_463716	7	888244:888252:889156:889240:891020:891118	889156:889240	ENST00000429178.1	KIRC	rs74742245	chr7:889169	A/G	3.04e-03
exon_skip_463716	7	888244:888252:889156:889240:891020:891118	889156:889240	ENST00000429178.1	LUAD	rs74742245	chr7:889169	A/G	1.42e-03
exon_skip_463716	7	888244:888252:889156:889240:891020:891118	889156:889240	ENST00000429178.1	LIHC	rs74742245	chr7:889169	A/G	1.23e-03
exon_skip_463716	7	888244:888252:889156:889240:891020:891118	889156:889240	ENST00000429178.1	LIHC	rs74742245	chr7:889169	A/G	1.23e-03
exon_skip_463716	7	888244:888252:889156:889240:891020:891118	889156:889240	ENST00000429178.1	LUSC	rs74742245	chr7:889169	A/G	1.63e-05
exon_skip_463716	7	888244:888252:889156:889240:891020:891118	889156:889240	ENST00000429178.1	PCPG	rs74742245	chr7:889169	A/G	1.09e-03
exon_skip_463716	7	888244:888252:889156:889240:891020:891118	889156:889240	ENST00000429178.1	PCPG	rs74742245	chr7:889169	A/G	1.09e-03
exon_skip_463715	7	888244:888252:889156:889240:889559:889670	889156:889240	ENST00000433212.1,ENST00000456758.2,ENST00000413171.2	ESCA	rs74742245	chr7:889169	A/G	1.40e-04
exon_skip_463715	7	888244:888252:889156:889240:889559:889670	889156:889240	ENST00000433212.1,ENST00000456758.2,ENST00000413171.2	HNSC	rs74742245	chr7:889169	A/G	2.75e-04
exon_skip_463715	7	888244:888252:889156:889240:889559:889670	889156:889240	ENST00000433212.1,ENST00000456758.2,ENST00000413171.2	BRCA	rs74742245	chr7:889169	A/G	5.38e-09
exon_skip_463715	7	888244:888252:889156:889240:889559:889670	889156:889240	ENST00000433212.1,ENST00000456758.2,ENST00000413171.2	LGG	rs74742245	chr7:889169	A/G	6.65e-09
exon_skip_463715	7	888244:888252:889156:889240:889559:889670	889156:889240	ENST00000433212.1,ENST00000456758.2,ENST00000413171.2	LGG	rs74742245	chr7:889169	A/G	6.73e-09
exon_skip_463715	7	888244:888252:889156:889240:889559:889670	889156:889240	ENST00000433212.1,ENST00000456758.2,ENST00000413171.2	LGG	rs74742245	chr7:889169	A/G	2.23e-04
exon_skip_463715	7	888244:888252:889156:889240:889559:889670	889156:889240	ENST00000433212.1,ENST00000456758.2,ENST00000413171.2	LGG	rs74742245	chr7:889169	A/G	1.22e-03
exon_skip_463715	7	888244:888252:889156:889240:889559:889670	889156:889240	ENST00000433212.1,ENST00000456758.2,ENST00000413171.2	KIRC	rs74742245	chr7:889169	A/G	3.04e-03
exon_skip_463715	7	888244:888252:889156:889240:889559:889670	889156:889240	ENST00000433212.1,ENST00000456758.2,ENST00000413171.2	LUAD	rs74742245	chr7:889169	A/G	1.42e-03
exon_skip_463715	7	888244:888252:889156:889240:889559:889670	889156:889240	ENST00000433212.1,ENST00000456758.2,ENST00000413171.2	LIHC	rs74742245	chr7:889169	A/G	1.23e-03
exon_skip_463715	7	888244:888252:889156:889240:889559:889670	889156:889240	ENST00000433212.1,ENST00000456758.2,ENST00000413171.2	LIHC	rs74742245	chr7:889169	A/G	1.23e-03
exon_skip_463715	7	888244:888252:889156:889240:889559:889670	889156:889240	ENST00000433212.1,ENST00000456758.2,ENST00000413171.2	LUSC	rs74742245	chr7:889169	A/G	1.63e-05
exon_skip_463715	7	888244:888252:889156:889240:889559:889670	889156:889240	ENST00000433212.1,ENST00000456758.2,ENST00000413171.2	PCPG	rs74742245	chr7:889169	A/G	1.09e-03
exon_skip_463715	7	888244:888252:889156:889240:889559:889670	889156:889240	ENST00000433212.1,ENST00000456758.2,ENST00000413171.2	PCPG	rs74742245	chr7:889169	A/G	1.09e-03
exon_skip_463662	7	856916:857136:871656:871738:872141:872238	871656:871738	ENST00000424128.1	COAD	rs4721600	chr7:871728	C/T	1.10e-05
exon_skip_463662	7	856916:857136:871656:871738:872141:872238	871656:871738	ENST00000424128.1	HNSC	rs4721600	chr7:871728	C/T	7.36e-04
exon_skip_463662	7	856916:857136:871656:871738:872141:872238	871656:871738	ENST00000424128.1	HNSC	rs4721600	chr7:871728	C/T	1.05e-03
exon_skip_463662	7	856916:857136:871656:871738:872141:872238	871656:871738	ENST00000424128.1	BRCA	rs4721600	chr7:871728	C/T	3.24e-07
exon_skip_463662	7	856916:857136:871656:871738:872141:872238	871656:871738	ENST00000424128.1	BRCA	rs4721600	chr7:871728	C/T	3.12e-05
exon_skip_463662	7	856916:857136:871656:871738:872141:872238	871656:871738	ENST00000424128.1	LGG	rs4721600	chr7:871728	C/T	5.08e-04
exon_skip_463662	7	856916:857136:871656:871738:872141:872238	871656:871738	ENST00000424128.1	LGG	rs4721600	chr7:871728	C/T	1.03e-03
exon_skip_463662	7	856916:857136:871656:871738:872141:872238	871656:871738	ENST00000424128.1	KIRC	rs4721600	chr7:871728	C/T	3.28e-03
exon_skip_463662	7	856916:857136:871656:871738:872141:872238	871656:871738	ENST00000424128.1	LUAD	rs4721600	chr7:871728	C/T	5.24e-04
exon_skip_463662	7	856916:857136:871656:871738:872141:872238	871656:871738	ENST00000424128.1	PRAD	rs4721600	chr7:871728	C/T	8.68e-07
exon_skip_463662	7	856916:857136:871656:871738:872141:872238	871656:871738	ENST00000424128.1	STAD	rs4721600	chr7:871728	C/T	2.97e-04
exon_skip_463662	7	856916:857136:871656:871738:872141:872238	871656:871738	ENST00000424128.1	THCA	rs4721600	chr7:871728	C/T	4.90e-05
exon_skip_463661	7	856391:856508:871656:871738:872141:872238	871656:871738	ENST00000439679.1	COAD	rs4721600	chr7:871728	C/T	1.10e-05
exon_skip_463661	7	856391:856508:871656:871738:872141:872238	871656:871738	ENST00000439679.1	HNSC	rs4721600	chr7:871728	C/T	7.36e-04
exon_skip_463661	7	856391:856508:871656:871738:872141:872238	871656:871738	ENST00000439679.1	HNSC	rs4721600	chr7:871728	C/T	1.05e-03
exon_skip_463661	7	856391:856508:871656:871738:872141:872238	871656:871738	ENST00000439679.1	BRCA	rs4721600	chr7:871728	C/T	3.24e-07
exon_skip_463661	7	856391:856508:871656:871738:872141:872238	871656:871738	ENST00000439679.1	BRCA	rs4721600	chr7:871728	C/T	3.12e-05
exon_skip_463661	7	856391:856508:871656:871738:872141:872238	871656:871738	ENST00000439679.1	LGG	rs4721600	chr7:871728	C/T	5.08e-04
exon_skip_463661	7	856391:856508:871656:871738:872141:872238	871656:871738	ENST00000439679.1	LGG	rs4721600	chr7:871728	C/T	1.03e-03
exon_skip_463661	7	856391:856508:871656:871738:872141:872238	871656:871738	ENST00000439679.1	KIRC	rs4721600	chr7:871728	C/T	3.28e-03
exon_skip_463661	7	856391:856508:871656:871738:872141:872238	871656:871738	ENST00000439679.1	LUAD	rs4721600	chr7:871728	C/T	5.24e-04
exon_skip_463661	7	856391:856508:871656:871738:872141:872238	871656:871738	ENST00000439679.1	PRAD	rs4721600	chr7:871728	C/T	8.68e-07
exon_skip_463661	7	856391:856508:871656:871738:872141:872238	871656:871738	ENST00000439679.1	STAD	rs4721600	chr7:871728	C/T	2.97e-04
exon_skip_463661	7	856391:856508:871656:871738:872141:872238	871656:871738	ENST00000439679.1	THCA	rs4721600	chr7:871728	C/T	4.90e-05
exon_skip_463651	7	856279:856310:871656:871738:872141:872238	871656:871738	ENST00000435699.1	COAD	rs4721600	chr7:871728	C/T	1.10e-05
exon_skip_463651	7	856279:856310:871656:871738:872141:872238	871656:871738	ENST00000435699.1	HNSC	rs4721600	chr7:871728	C/T	7.36e-04
exon_skip_463651	7	856279:856310:871656:871738:872141:872238	871656:871738	ENST00000435699.1	HNSC	rs4721600	chr7:871728	C/T	1.05e-03
exon_skip_463651	7	856279:856310:871656:871738:872141:872238	871656:871738	ENST00000435699.1	BRCA	rs4721600	chr7:871728	C/T	3.24e-07
exon_skip_463651	7	856279:856310:871656:871738:872141:872238	871656:871738	ENST00000435699.1	BRCA	rs4721600	chr7:871728	C/T	3.12e-05
exon_skip_463651	7	856279:856310:871656:871738:872141:872238	871656:871738	ENST00000435699.1	LGG	rs4721600	chr7:871728	C/T	5.08e-04
exon_skip_463651	7	856279:856310:871656:871738:872141:872238	871656:871738	ENST00000435699.1	LGG	rs4721600	chr7:871728	C/T	1.03e-03
exon_skip_463651	7	856279:856310:871656:871738:872141:872238	871656:871738	ENST00000435699.1	KIRC	rs4721600	chr7:871728	C/T	3.28e-03
exon_skip_463651	7	856279:856310:871656:871738:872141:872238	871656:871738	ENST00000435699.1	LUAD	rs4721600	chr7:871728	C/T	5.24e-04
exon_skip_463651	7	856279:856310:871656:871738:872141:872238	871656:871738	ENST00000435699.1	PRAD	rs4721600	chr7:871728	C/T	8.68e-07
exon_skip_463651	7	856279:856310:871656:871738:872141:872238	871656:871738	ENST00000435699.1	STAD	rs4721600	chr7:871728	C/T	2.97e-04
exon_skip_463651	7	856279:856310:871656:871738:872141:872238	871656:871738	ENST00000435699.1	THCA	rs4721600	chr7:871728	C/T	4.90e-05
exon_skip_463746	7	895994:896038:897464:897594:899764:900019	897464:897594	ENST00000457861.1,ENST00000433212.1,ENST00000456758.2,ENST00000405266.1,ENST00000429178.1,ENST00000389574.3,ENST00000413171.2,ENST00000413514.2,ENST00000452783.2,ENST00000475971.1,ENST00000401592.1,ENST00000425407.2	ESCA	rs59910530	chr7:897496	G/A	1.79e-04
exon_skip_463746	7	895994:896038:897464:897594:899764:900019	897464:897594	ENST00000457861.1,ENST00000433212.1,ENST00000456758.2,ENST00000405266.1,ENST00000429178.1,ENST00000389574.3,ENST00000413171.2,ENST00000413514.2,ENST00000452783.2,ENST00000475971.1,ENST00000401592.1,ENST00000425407.2	HNSC	rs10950789	chr7:897492	A/G	2.39e-06
exon_skip_463746	7	895994:896038:897464:897594:899764:900019	897464:897594	ENST00000457861.1,ENST00000433212.1,ENST00000456758.2,ENST00000405266.1,ENST00000429178.1,ENST00000389574.3,ENST00000413171.2,ENST00000413514.2,ENST00000452783.2,ENST00000475971.1,ENST00000401592.1,ENST00000425407.2	HNSC	rs59910530	chr7:897496	G/A	1.86e-04
exon_skip_463746	7	895994:896038:897464:897594:899764:900019	897464:897594	ENST00000457861.1,ENST00000433212.1,ENST00000456758.2,ENST00000405266.1,ENST00000429178.1,ENST00000389574.3,ENST00000413171.2,ENST00000413514.2,ENST00000452783.2,ENST00000475971.1,ENST00000401592.1,ENST00000425407.2	BRCA	rs59910530	chr7:897496	G/A	8.38e-08
exon_skip_463746	7	895994:896038:897464:897594:899764:900019	897464:897594	ENST00000457861.1,ENST00000433212.1,ENST00000456758.2,ENST00000405266.1,ENST00000429178.1,ENST00000389574.3,ENST00000413171.2,ENST00000413514.2,ENST00000452783.2,ENST00000475971.1,ENST00000401592.1,ENST00000425407.2	BRCA	rs10950789	chr7:897492	A/G	6.30e-07
exon_skip_463746	7	895994:896038:897464:897594:899764:900019	897464:897594	ENST00000457861.1,ENST00000433212.1,ENST00000456758.2,ENST00000405266.1,ENST00000429178.1,ENST00000389574.3,ENST00000413171.2,ENST00000413514.2,ENST00000452783.2,ENST00000475971.1,ENST00000401592.1,ENST00000425407.2	BRCA	rs10950789	chr7:897492	A/G	1.53e-06
exon_skip_463746	7	895994:896038:897464:897594:899764:900019	897464:897594	ENST00000457861.1,ENST00000433212.1,ENST00000456758.2,ENST00000405266.1,ENST00000429178.1,ENST00000389574.3,ENST00000413171.2,ENST00000413514.2,ENST00000452783.2,ENST00000475971.1,ENST00000401592.1,ENST00000425407.2	BRCA	rs10950789	chr7:897492	A/G	2.61e-03
exon_skip_463746	7	895994:896038:897464:897594:899764:900019	897464:897594	ENST00000457861.1,ENST00000433212.1,ENST00000456758.2,ENST00000405266.1,ENST00000429178.1,ENST00000389574.3,ENST00000413171.2,ENST00000413514.2,ENST00000452783.2,ENST00000475971.1,ENST00000401592.1,ENST00000425407.2	KIRP	rs10950789	chr7:897492	A/G	1.31e-05
exon_skip_463746	7	895994:896038:897464:897594:899764:900019	897464:897594	ENST00000457861.1,ENST00000433212.1,ENST00000456758.2,ENST00000405266.1,ENST00000429178.1,ENST00000389574.3,ENST00000413171.2,ENST00000413514.2,ENST00000452783.2,ENST00000475971.1,ENST00000401592.1,ENST00000425407.2	LGG	rs59910530	chr7:897496	G/A	2.05e-09
exon_skip_463746	7	895994:896038:897464:897594:899764:900019	897464:897594	ENST00000457861.1,ENST00000433212.1,ENST00000456758.2,ENST00000405266.1,ENST00000429178.1,ENST00000389574.3,ENST00000413171.2,ENST00000413514.2,ENST00000452783.2,ENST00000475971.1,ENST00000401592.1,ENST00000425407.2	LGG	rs59910530	chr7:897496	G/A	2.08e-09
exon_skip_463746	7	895994:896038:897464:897594:899764:900019	897464:897594	ENST00000457861.1,ENST00000433212.1,ENST00000456758.2,ENST00000405266.1,ENST00000429178.1,ENST00000389574.3,ENST00000413171.2,ENST00000413514.2,ENST00000452783.2,ENST00000475971.1,ENST00000401592.1,ENST00000425407.2	LGG	rs10950789	chr7:897492	A/G	2.06e-07
exon_skip_463746	7	895994:896038:897464:897594:899764:900019	897464:897594	ENST00000457861.1,ENST00000433212.1,ENST00000456758.2,ENST00000405266.1,ENST00000429178.1,ENST00000389574.3,ENST00000413171.2,ENST00000413514.2,ENST00000452783.2,ENST00000475971.1,ENST00000401592.1,ENST00000425407.2	LGG	rs10950789	chr7:897492	A/G	9.63e-06
exon_skip_463746	7	895994:896038:897464:897594:899764:900019	897464:897594	ENST00000457861.1,ENST00000433212.1,ENST00000456758.2,ENST00000405266.1,ENST00000429178.1,ENST00000389574.3,ENST00000413171.2,ENST00000413514.2,ENST00000452783.2,ENST00000475971.1,ENST00000401592.1,ENST00000425407.2	LGG	rs10950789	chr7:897492	A/G	9.72e-06
exon_skip_463746	7	895994:896038:897464:897594:899764:900019	897464:897594	ENST00000457861.1,ENST00000433212.1,ENST00000456758.2,ENST00000405266.1,ENST00000429178.1,ENST00000389574.3,ENST00000413171.2,ENST00000413514.2,ENST00000452783.2,ENST00000475971.1,ENST00000401592.1,ENST00000425407.2	LGG	rs59910530	chr7:897496	G/A	6.97e-05
exon_skip_463746	7	895994:896038:897464:897594:899764:900019	897464:897594	ENST00000457861.1,ENST00000433212.1,ENST00000456758.2,ENST00000405266.1,ENST00000429178.1,ENST00000389574.3,ENST00000413171.2,ENST00000413514.2,ENST00000452783.2,ENST00000475971.1,ENST00000401592.1,ENST00000425407.2	LGG	rs59910530	chr7:897496	G/A	1.44e-03
exon_skip_463746	7	895994:896038:897464:897594:899764:900019	897464:897594	ENST00000457861.1,ENST00000433212.1,ENST00000456758.2,ENST00000405266.1,ENST00000429178.1,ENST00000389574.3,ENST00000413171.2,ENST00000413514.2,ENST00000452783.2,ENST00000475971.1,ENST00000401592.1,ENST00000425407.2	KIRC	rs10950789	chr7:897492	A/G	1.47e-05
exon_skip_463746	7	895994:896038:897464:897594:899764:900019	897464:897594	ENST00000457861.1,ENST00000433212.1,ENST00000456758.2,ENST00000405266.1,ENST00000429178.1,ENST00000389574.3,ENST00000413171.2,ENST00000413514.2,ENST00000452783.2,ENST00000475971.1,ENST00000401592.1,ENST00000425407.2	LUAD	rs10950789	chr7:897492	A/G	7.34e-04
exon_skip_463746	7	895994:896038:897464:897594:899764:900019	897464:897594	ENST00000457861.1,ENST00000433212.1,ENST00000456758.2,ENST00000405266.1,ENST00000429178.1,ENST00000389574.3,ENST00000413171.2,ENST00000413514.2,ENST00000452783.2,ENST00000475971.1,ENST00000401592.1,ENST00000425407.2	LUAD	rs59910530	chr7:897496	G/A	2.67e-03
exon_skip_463746	7	895994:896038:897464:897594:899764:900019	897464:897594	ENST00000457861.1,ENST00000433212.1,ENST00000456758.2,ENST00000405266.1,ENST00000429178.1,ENST00000389574.3,ENST00000413171.2,ENST00000413514.2,ENST00000452783.2,ENST00000475971.1,ENST00000401592.1,ENST00000425407.2	LUAD	rs10950789	chr7:897492	A/G	2.68e-03
exon_skip_463746	7	895994:896038:897464:897594:899764:900019	897464:897594	ENST00000457861.1,ENST00000433212.1,ENST00000456758.2,ENST00000405266.1,ENST00000429178.1,ENST00000389574.3,ENST00000413171.2,ENST00000413514.2,ENST00000452783.2,ENST00000475971.1,ENST00000401592.1,ENST00000425407.2	LIHC	rs59910530	chr7:897496	G/A	7.17e-04
exon_skip_463746	7	895994:896038:897464:897594:899764:900019	897464:897594	ENST00000457861.1,ENST00000433212.1,ENST00000456758.2,ENST00000405266.1,ENST00000429178.1,ENST00000389574.3,ENST00000413171.2,ENST00000413514.2,ENST00000452783.2,ENST00000475971.1,ENST00000401592.1,ENST00000425407.2	LIHC	rs59910530	chr7:897496	G/A	7.17e-04
exon_skip_463746	7	895994:896038:897464:897594:899764:900019	897464:897594	ENST00000457861.1,ENST00000433212.1,ENST00000456758.2,ENST00000405266.1,ENST00000429178.1,ENST00000389574.3,ENST00000413171.2,ENST00000413514.2,ENST00000452783.2,ENST00000475971.1,ENST00000401592.1,ENST00000425407.2	LUSC	rs59910530	chr7:897496	G/A	7.85e-06
exon_skip_463746	7	895994:896038:897464:897594:899764:900019	897464:897594	ENST00000457861.1,ENST00000433212.1,ENST00000456758.2,ENST00000405266.1,ENST00000429178.1,ENST00000389574.3,ENST00000413171.2,ENST00000413514.2,ENST00000452783.2,ENST00000475971.1,ENST00000401592.1,ENST00000425407.2	PCPG	rs59910530	chr7:897496	G/A	8.90e-04
exon_skip_463746	7	895994:896038:897464:897594:899764:900019	897464:897594	ENST00000457861.1,ENST00000433212.1,ENST00000456758.2,ENST00000405266.1,ENST00000429178.1,ENST00000389574.3,ENST00000413171.2,ENST00000413514.2,ENST00000452783.2,ENST00000475971.1,ENST00000401592.1,ENST00000425407.2	PCPG	rs59910530	chr7:897496	G/A	8.90e-04
exon_skip_463746	7	895994:896038:897464:897594:899764:900019	897464:897594	ENST00000457861.1,ENST00000433212.1,ENST00000456758.2,ENST00000405266.1,ENST00000429178.1,ENST00000389574.3,ENST00000413171.2,ENST00000413514.2,ENST00000452783.2,ENST00000475971.1,ENST00000401592.1,ENST00000425407.2	PRAD	rs10950789	chr7:897492	A/G	7.24e-05
exon_skip_463746	7	895994:896038:897464:897594:899764:900019	897464:897594	ENST00000457861.1,ENST00000433212.1,ENST00000456758.2,ENST00000405266.1,ENST00000429178.1,ENST00000389574.3,ENST00000413171.2,ENST00000413514.2,ENST00000452783.2,ENST00000475971.1,ENST00000401592.1,ENST00000425407.2	THCA	rs10950789	chr7:897492	A/G	1.79e-03
exon_skip_463717	7	888244:888252:889156:889240:891586:891680	889156:889240	ENST00000413514.2	ESCA	rs74742245	chr7:889169	A/G	1.40e-04
exon_skip_463717	7	888244:888252:889156:889240:891586:891680	889156:889240	ENST00000413514.2	HNSC	rs74742245	chr7:889169	A/G	2.75e-04
exon_skip_463717	7	888244:888252:889156:889240:891586:891680	889156:889240	ENST00000413514.2	BRCA	rs74742245	chr7:889169	A/G	5.38e-09
exon_skip_463717	7	888244:888252:889156:889240:891586:891680	889156:889240	ENST00000413514.2	LGG	rs74742245	chr7:889169	A/G	6.65e-09
exon_skip_463717	7	888244:888252:889156:889240:891586:891680	889156:889240	ENST00000413514.2	LGG	rs74742245	chr7:889169	A/G	6.73e-09
exon_skip_463717	7	888244:888252:889156:889240:891586:891680	889156:889240	ENST00000413514.2	LGG	rs74742245	chr7:889169	A/G	2.23e-04
exon_skip_463717	7	888244:888252:889156:889240:891586:891680	889156:889240	ENST00000413514.2	LGG	rs74742245	chr7:889169	A/G	1.22e-03
exon_skip_463717	7	888244:888252:889156:889240:891586:891680	889156:889240	ENST00000413514.2	KIRC	rs74742245	chr7:889169	A/G	3.04e-03
exon_skip_463717	7	888244:888252:889156:889240:891586:891680	889156:889240	ENST00000413514.2	LUAD	rs74742245	chr7:889169	A/G	1.42e-03
exon_skip_463717	7	888244:888252:889156:889240:891586:891680	889156:889240	ENST00000413514.2	LIHC	rs74742245	chr7:889169	A/G	1.23e-03
exon_skip_463717	7	888244:888252:889156:889240:891586:891680	889156:889240	ENST00000413514.2	LIHC	rs74742245	chr7:889169	A/G	1.23e-03
exon_skip_463717	7	888244:888252:889156:889240:891586:891680	889156:889240	ENST00000413514.2	LUSC	rs74742245	chr7:889169	A/G	1.63e-05
exon_skip_463717	7	888244:888252:889156:889240:891586:891680	889156:889240	ENST00000413514.2	PCPG	rs74742245	chr7:889169	A/G	1.09e-03
exon_skip_463717	7	888244:888252:889156:889240:891586:891680	889156:889240	ENST00000413514.2	PCPG	rs74742245	chr7:889169	A/G	1.09e-03
exon_skip_463701	7	883006:883157:889156:889240:889559:889670	889156:889240	ENST00000419312.1	ESCA	rs74742245	chr7:889169	A/G	1.40e-04
exon_skip_463701	7	883006:883157:889156:889240:889559:889670	889156:889240	ENST00000419312.1	HNSC	rs74742245	chr7:889169	A/G	2.75e-04
exon_skip_463701	7	883006:883157:889156:889240:889559:889670	889156:889240	ENST00000419312.1	BRCA	rs74742245	chr7:889169	A/G	5.38e-09
exon_skip_463701	7	883006:883157:889156:889240:889559:889670	889156:889240	ENST00000419312.1	LGG	rs74742245	chr7:889169	A/G	6.65e-09
exon_skip_463701	7	883006:883157:889156:889240:889559:889670	889156:889240	ENST00000419312.1	LGG	rs74742245	chr7:889169	A/G	6.73e-09
exon_skip_463701	7	883006:883157:889156:889240:889559:889670	889156:889240	ENST00000419312.1	LGG	rs74742245	chr7:889169	A/G	2.23e-04
exon_skip_463701	7	883006:883157:889156:889240:889559:889670	889156:889240	ENST00000419312.1	LGG	rs74742245	chr7:889169	A/G	1.22e-03
exon_skip_463701	7	883006:883157:889156:889240:889559:889670	889156:889240	ENST00000419312.1	KIRC	rs74742245	chr7:889169	A/G	3.04e-03
exon_skip_463701	7	883006:883157:889156:889240:889559:889670	889156:889240	ENST00000419312.1	LUAD	rs74742245	chr7:889169	A/G	1.42e-03
exon_skip_463701	7	883006:883157:889156:889240:889559:889670	889156:889240	ENST00000419312.1	LIHC	rs74742245	chr7:889169	A/G	1.23e-03
exon_skip_463701	7	883006:883157:889156:889240:889559:889670	889156:889240	ENST00000419312.1	LIHC	rs74742245	chr7:889169	A/G	1.23e-03
exon_skip_463701	7	883006:883157:889156:889240:889559:889670	889156:889240	ENST00000419312.1	LUSC	rs74742245	chr7:889169	A/G	1.63e-05
exon_skip_463701	7	883006:883157:889156:889240:889559:889670	889156:889240	ENST00000419312.1	PCPG	rs74742245	chr7:889169	A/G	1.09e-03
exon_skip_463701	7	883006:883157:889156:889240:889559:889670	889156:889240	ENST00000419312.1	PCPG	rs74742245	chr7:889169	A/G	1.09e-03

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Splicing Quantitative Trait Methylation (sQTM) in the skipped exon for SUN1

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Survival analysis of Splicing Quantitative Trait Methylation (sQTM) in the skipped exon for SUN1

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RelatedDrugs for SUN1

Approved drugs targeting this gene.
(DrugBank Version 5.1.0 2018-04-02)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for SUN1

Diseases associated with this gene.
(DisGeNet 4.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	Gene structures and expression levels
	Exon skipping events with PSIs in TCGA
	Exon skipping events with PSIs in GTEx
	Open reading frame (ORF) annotation in the exon skipping event
	Exon skipping events in the canonical protein sequence
	SNVs in the skipped exons with depth of coverage
	Splicing Quantitative Trait Loci (sQTLs) in the skipped exons
	Splicing Quantitative Trait Methylation (sQTM) in the skipped exon
	Related drugs with this gene
	Related diseases with this gene

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Gene summary for SUN1

Exon skipping events across known transcript of Ensembl for SUN1 from UCSC genome browser

Gene isoform structures and expression levels for SUN1

Exon skipping events with PSIs in TCGA for SUN1

Exon skipping events with PSIs in GTEx for SUN1

Open reading frame (ORF) annotation in the exon skipping event for SUN1

Infer the effects of exon skipping event on protein functional features for SUN1

SNVs in the skipped exons for SUN1

Splicing Quantitative Trait Loci (sQTL) in the exon skipping event for SUN1

Splicing Quantitative Trait Methylation (sQTM) in the skipped exon for SUN1

Survival analysis of Splicing Quantitative Trait Methylation (sQTM) in the skipped exon for SUN1

RelatedDrugs for SUN1

RelatedDiseases for SUN1