ExonSkipDB: functional annotation of exon skipping event in human

Gene summary for GGA3

Gene summary

Gene information	Gene symbol	GGA3
	Gene ID	23163
	Gene name	golgi associated, gamma adaptin ear containing, ARF binding protein 3
	Synonyms	-
	Cytomap	17q25.1
	Type of gene	protein-coding
	Description	ADP-ribosylation factor-binding protein GGA3Golgi-localized, gamma ear-containing, ARF-binding protein 3
	Modification date	20180522
	UniProtAcc	Q9NZ52
	Context	PubMed: GGA3 [Title/Abstract] AND exon [Title/Abstract] AND skip [Title/Abstract] - Title (PMID)

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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Exon skipping events across known transcript of Ensembl for GGA3 from UCSC genome browser

Skipped exons in TCGA and GTEx based on Ensembl gene isoform structure.
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

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Gene isoform structures and expression levels for GGA3

Expression levels of gene isoforms across TCGA.

Expression levels of gene isoforms across GTEx.

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Exon skipping events with PSIs in TCGA for GGA3

Information of exkip skipping event in TCGA.

Exon skip ID	chr	Exons involved in exon skipping	Skipped exon	ENSG	ENSTs
exon_skip_293267	17	73233620:73233891:73234062:73234171:73234732:73234843	73234062:73234171	ENSG00000125447.12	ENST00000580646.1
exon_skip_293274	17	73234994:73235164:73235455:73235652:73235869:73236189	73235455:73235652	ENSG00000125447.12	ENST00000582717.1,ENST00000538886.1,ENST00000245541.6,ENST00000537584.2,ENST00000584978.1,ENST00000582486.1,ENST00000582200.1,ENST00000578348.1,ENST00000351904.7
exon_skip_293281	17	73238969:73238992:73239143:73239247:73239527:73239651	73239143:73239247	ENSG00000125447.12	ENST00000582717.1,ENST00000538886.1,ENST00000245541.6,ENST00000537584.2,ENST00000582486.1,ENST00000580799.1,ENST00000582200.1,ENST00000578348.1,ENST00000351904.7
exon_skip_293282	17	73238969:73238992:73239143:73239339:73239527:73239651	73239143:73239339	ENSG00000125447.12	ENST00000584243.1
exon_skip_293283	17	73239597:73239651:73240482:73240571:73240699:73240798	73240482:73240571	ENSG00000125447.12	ENST00000582376.1
exon_skip_293285	17	73239597:73239651:73240699:73240798:73242589:73242665	73240699:73240798	ENSG00000125447.12	ENST00000584243.1,ENST00000582717.1,ENST00000579743.1,ENST00000245541.6,ENST00000537584.2,ENST00000584978.1,ENST00000582486.1,ENST00000537686.1,ENST00000582200.1
exon_skip_293290	17	73242792:73242877:73244920:73245089:73257628:73257666	73244920:73245089	ENSG00000125447.12	ENST00000537584.2,ENST00000577435.1
exon_skip_293291	17	73242792:73242877:73244920:73245089:73258362:73258439	73244920:73245089	ENSG00000125447.12	ENST00000579743.1

PSI values of skipped exons in TCGA.

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Exon skipping events with PSIs in GTEx for GGA3

Information of exkip skipping event in GTEx

Exon skip ID	chr	Exons involved in exon skipping	Skipped exon	ENSG	ENSTs
exon_skip_293267	17	73233620:73233891:73234062:73234171:73234732:73234843	73234062:73234171	ENSG00000125447.12	ENST00000580646.1
exon_skip_293274	17	73234994:73235164:73235455:73235652:73235869:73236189	73235455:73235652	ENSG00000125447.12	ENST00000351904.7,ENST00000537584.2,ENST00000584978.1,ENST00000245541.6,ENST00000582200.1,ENST00000578348.1,ENST00000582486.1,ENST00000538886.1,ENST00000582717.1
exon_skip_293281	17	73238969:73238992:73239143:73239247:73239527:73239651	73239143:73239247	ENSG00000125447.12	ENST00000351904.7,ENST00000537584.2,ENST00000245541.6,ENST00000582200.1,ENST00000578348.1,ENST00000582486.1,ENST00000538886.1,ENST00000582717.1,ENST00000580799.1
exon_skip_293282	17	73238969:73238992:73239143:73239339:73239527:73239651	73239143:73239339	ENSG00000125447.12	ENST00000584243.1
exon_skip_293283	17	73239597:73239651:73240482:73240571:73240699:73240798	73240482:73240571	ENSG00000125447.12	ENST00000582376.1
exon_skip_293285	17	73239597:73239651:73240699:73240798:73242589:73242665	73240699:73240798	ENSG00000125447.12	ENST00000537584.2,ENST00000584978.1,ENST00000245541.6,ENST00000582200.1,ENST00000582486.1,ENST00000582717.1,ENST00000537686.1,ENST00000584243.1,ENST00000579743.1
exon_skip_293290	17	73242792:73242877:73244920:73245089:73257628:73257666	73244920:73245089	ENSG00000125447.12	ENST00000537584.2,ENST00000577435.1
exon_skip_293291	17	73242792:73242877:73244920:73245089:73258362:73258439	73244920:73245089	ENSG00000125447.12	ENST00000579743.1

PSI values of skipped exons in GTEx.

* Skipped exon sequences.

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Open reading frame (ORF) annotation in the exon skipping event for GGA3

Open reading frame (ORF) of individual exon skipping events in TCGA based on the Ensembl gene structure combined from isoforms.

ENST	Start of skipped exon	End of skipped exon	ORF
ENST00000537686	73240699	73240798	In-frame

Open reading frame (ORF) of individual exon skipping events in GTEx based on the Ensembl gene structure combined from isoforms.

ENST	Start of skipped exon	End of skipped exon	ORF
ENST00000537686	73240699	73240798	In-frame

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Infer the effects of exon skipping event on protein functional features for GGA3

Exon skipping at the protein sequence level and followed lost functional features.
* Click on the image to enlarge it in a new window.

Loci of skipped exons in TCGA across genomic, transcript, and protein sequence levels of In-frame cases.

ENST	Length of mRNA	Length of AA seq.	Genomic start	Genomic end	mRNA start	mRNA end	AA start	AA end
ENST00000537686	993	723	73240699	73240798	229	327	67	100

Loci of skipped exons in GTEx across genomic, transcript, and protein sequence levels of In-frame cases.

ENST	Length of mRNA	Length of AA seq.	Genomic start	Genomic end	mRNA start	mRNA end	AA start	AA end
ENST00000537686	993	723	73240699	73240798	229	327	67	100

Lost protein functional features of individual exon skipping events in TCGA.

UniProt acc.	Start of exon skipping (AA)	End of exon skipping (AA)	Protein feature start (AA)	Protein feature end (AA)	Category of protein feature	Description of feature
Q9NZ52	67	100	1	122	Alternative sequence	ID=VSP_045133;Note=In isoform 3. Missing;Ontology_term=ECO:0000303;evidence=ECO:0000303\|PubMed:14702039;Dbxref=PMID:14702039
Q9NZ52	67	100	1	72	Alternative sequence	ID=VSP_046868;Note=In isoform 4. Missing;Ontology_term=ECO:0000303;evidence=ECO:0000303\|PubMed:14702039;Dbxref=PMID:14702039
Q9NZ52	67	100	68	100	Alternative sequence	ID=VSP_001745;Note=In isoform Short. Missing;Ontology_term=ECO:0000303,ECO:0000303,ECO:0000303,ECO:0000303;evidence=ECO:0000303\|PubMed:10747089,ECO:0000303\|PubMed:10749927,ECO:0000303\|PubMed:15489334,ECO:0000303\|PubMed:8590280;Dbxref=PMID:10747089,PMID:10
Q9NZ52	67	100	1	723	Chain	ID=PRO_0000212684;Note=ADP-ribosylation factor-binding protein GGA3
Q9NZ52	67	100	16	146	Domain	Note=VHS;Ontology_term=ECO:0000255;evidence=ECO:0000255\|PROSITE-ProRule:PRU00218
Q9NZ52	67	100	59	75	Helix	Ontology_term=ECO:0000244;evidence=ECO:0000244\|PDB:1JUQ
Q9NZ52	67	100	77	84	Helix	Ontology_term=ECO:0000244;evidence=ECO:0000244\|PDB:1JUQ
Q9NZ52	67	100	87	97	Helix	Ontology_term=ECO:0000244;evidence=ECO:0000244\|PDB:1JUQ
Q9NZ52	67	100	99	103	Helix	Ontology_term=ECO:0000244;evidence=ECO:0000244\|PDB:1JUQ
Q9NZ52	67	100	1	313	Region	Note=Binds to ARF1 (in long isoform)

Lost protein functional features of individual exon skipping events in GTEx.

UniProt acc.	Start of exon skipping (AA)	End of exon skipping (AA)	Protein feature start (AA)	Protein feature end (AA)	Category of protein feature	Description of feature
Q9NZ52	67	100	1	122	Alternative sequence	ID=VSP_045133;Note=In isoform 3. Missing;Ontology_term=ECO:0000303;evidence=ECO:0000303\|PubMed:14702039;Dbxref=PMID:14702039
Q9NZ52	67	100	1	72	Alternative sequence	ID=VSP_046868;Note=In isoform 4. Missing;Ontology_term=ECO:0000303;evidence=ECO:0000303\|PubMed:14702039;Dbxref=PMID:14702039
Q9NZ52	67	100	68	100	Alternative sequence	ID=VSP_001745;Note=In isoform Short. Missing;Ontology_term=ECO:0000303,ECO:0000303,ECO:0000303,ECO:0000303;evidence=ECO:0000303\|PubMed:10747089,ECO:0000303\|PubMed:10749927,ECO:0000303\|PubMed:15489334,ECO:0000303\|PubMed:8590280;Dbxref=PMID:10747089,PMID:10
Q9NZ52	67	100	1	723	Chain	ID=PRO_0000212684;Note=ADP-ribosylation factor-binding protein GGA3
Q9NZ52	67	100	16	146	Domain	Note=VHS;Ontology_term=ECO:0000255;evidence=ECO:0000255\|PROSITE-ProRule:PRU00218
Q9NZ52	67	100	59	75	Helix	Ontology_term=ECO:0000244;evidence=ECO:0000244\|PDB:1JUQ
Q9NZ52	67	100	77	84	Helix	Ontology_term=ECO:0000244;evidence=ECO:0000244\|PDB:1JUQ
Q9NZ52	67	100	87	97	Helix	Ontology_term=ECO:0000244;evidence=ECO:0000244\|PDB:1JUQ
Q9NZ52	67	100	99	103	Helix	Ontology_term=ECO:0000244;evidence=ECO:0000244\|PDB:1JUQ
Q9NZ52	67	100	1	313	Region	Note=Binds to ARF1 (in long isoform)

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SNVs in the skipped exons for GGA3

- Lollipop plot for presenting exon skipping associated SNVs.
* Click on the image to enlarge it in a new window.

- Differential PSIs between mutated versus non-mutated samples.

GGA3_SKCM_exon_skip_293285_psi_boxplot.png
boxplot

- Non-synonymous mutations located in the skipped exons in TCGA.

Cancer type	Sample	ESID	Skipped exon start	Skipped exon end	Mutation start	Mutation end	Mutation type	Reference seq	Mutation seq	AAchange
LIHC	TCGA-G3-A3CJ-01	exon_skip_293274	73235456	73235652	73235474	73235474	Frame_Shift_Del	G	-	p.L588fs
BLCA	TCGA-FD-A3NA-01	exon_skip_293281	73239144	73239247	73239175	73239175	Frame_Shift_Del	T	-	p.N166fs
BLCA	TCGA-FD-A3NA-01	exon_skip_293282	73239144	73239339	73239175	73239175	Frame_Shift_Del	T	-	p.N166fs
STAD	TCGA-CD-A4MJ-01	exon_skip_293281	73239144	73239247	73239175	73239175	Frame_Shift_Del	T	-	p.N166fs
STAD	TCGA-CD-A4MJ-01	exon_skip_293282	73239144	73239339	73239175	73239175	Frame_Shift_Del	T	-	p.N166fs
SKCM	TCGA-W3-AA1V-06	exon_skip_293274	73235456	73235652	73235534	73235534	Nonsense_Mutation	G	A	p.Q568*
BLCA	TCGA-DK-A6AW-01		73240700	73240798	73240753	73240753	Nonsense_Mutation	C	A	p.E83*
SKCM	TCGA-ER-A194-01		73240700	73240798	73240699	73240699	Splice_Site	C	T	.

- Depth of coverage in the three exons composing exon skipping event

Depth of coverage in three exons	Mutation description
	Sample: TCGA-ER-A194-01
	Cancer type: SKCM
	ESID:
	Skipped exon start: 73240700
	Skipped exon end: 73240798
	Mutation start: 73240699
	Mutation end: 73240699
	Mutation type: Splice_Site
	Reference seq: C
	Mutation seq: T
	AAchange: .
exon_skip_293285_SKCM_TCGA-ER-A194-01.png
exon_skip_297574_SKCM_TCGA-ER-A194-01.png
exon_skip_297575_SKCM_TCGA-ER-A194-01.png
exon_skip_385517_SKCM_TCGA-ER-A194-01.png

- Non-synonymous mutations located in the skipped exons in CCLE.

Sample	Skipped exon start	Skipped exon end	Mutation start	Mutation end	Mutation type	Reference seq	Mutation seq	AAchange
HCC1143_BREAST	73235456	73235652	73235515	73235515	Missense_Mutation	G	A	p.P574L
SNUC2B_LARGE_INTESTINE	73235456	73235652	73235515	73235515	Missense_Mutation	G	A	p.P574L
HEC59_ENDOMETRIUM	73235456	73235652	73235560	73235560	Missense_Mutation	C	T	p.S559N
OVMANA_OVARY	73235456	73235652	73235564	73235564	Missense_Mutation	C	T	p.G558S
HEC1_ENDOMETRIUM	73235456	73235652	73235611	73235611	Missense_Mutation	G	T	p.P542H
HEC1B_ENDOMETRIUM	73235456	73235652	73235611	73235611	Missense_Mutation	G	T	p.P542H
EB3_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE	73239144	73239247	73239224	73239224	Missense_Mutation	T	G	p.I150L
EB3_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE	73239144	73239339	73239224	73239224	Missense_Mutation	T	G	p.I150L
L363_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE	73239144	73239247	73239242	73239242	Missense_Mutation	C	G	p.V144L
L363_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE	73239144	73239339	73239242	73239242	Missense_Mutation	C	G	p.V144L

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Splicing Quantitative Trait Loci (sQTL) in the exon skipping event for GGA3

sQTL information located at the skipped exons.

Exon skip ID	Chromosome	Three exons	Skippped exon	ENST	Cancer type	SNP id	Location	DNA change (ref/var)	P-value
exon_skip_293290	17	73242792:73242877:73244920:73245089:73257628:73257666	73244920:73245089	ENST00000537584.2,ENST00000577435.1	COAD	rs78740665	chr17:73244930	G/C	1.36e-03
exon_skip_293290	17	73242792:73242877:73244920:73245089:73257628:73257666	73244920:73245089	ENST00000537584.2,ENST00000577435.1	HNSC	rs78740665	chr17:73244930	G/C	6.31e-06
exon_skip_293290	17	73242792:73242877:73244920:73245089:73257628:73257666	73244920:73245089	ENST00000537584.2,ENST00000577435.1	HNSC	rs78740665	chr17:73244930	G/C	3.30e-04
exon_skip_293290	17	73242792:73242877:73244920:73245089:73257628:73257666	73244920:73245089	ENST00000537584.2,ENST00000577435.1	LGG	rs78740665	chr17:73244930	G/C	3.72e-13
exon_skip_293290	17	73242792:73242877:73244920:73245089:73257628:73257666	73244920:73245089	ENST00000537584.2,ENST00000577435.1	LGG	rs78740665	chr17:73244930	G/C	1.02e-04
exon_skip_293290	17	73242792:73242877:73244920:73245089:73257628:73257666	73244920:73245089	ENST00000537584.2,ENST00000577435.1	KIRC	rs78740665	chr17:73244930	G/C	3.82e-06
exon_skip_293290	17	73242792:73242877:73244920:73245089:73257628:73257666	73244920:73245089	ENST00000537584.2,ENST00000577435.1	KIRC	rs78740665	chr17:73244930	G/C	1.82e-03
exon_skip_293290	17	73242792:73242877:73244920:73245089:73257628:73257666	73244920:73245089	ENST00000537584.2,ENST00000577435.1	LUAD	rs78740665	chr17:73244930	G/C	5.07e-06
exon_skip_293290	17	73242792:73242877:73244920:73245089:73257628:73257666	73244920:73245089	ENST00000537584.2,ENST00000577435.1	LUSC	rs78740665	chr17:73244930	G/C	5.30e-06
exon_skip_293290	17	73242792:73242877:73244920:73245089:73257628:73257666	73244920:73245089	ENST00000537584.2,ENST00000577435.1	LUSC	rs78740665	chr17:73244930	G/C	8.87e-05
exon_skip_293290	17	73242792:73242877:73244920:73245089:73257628:73257666	73244920:73245089	ENST00000537584.2,ENST00000577435.1	PAAD	rs78740665	chr17:73244930	G/C	4.31e-05
exon_skip_293290	17	73242792:73242877:73244920:73245089:73257628:73257666	73244920:73245089	ENST00000537584.2,ENST00000577435.1	PRAD	rs78740665	chr17:73244930	G/C	3.18e-03
exon_skip_293290	17	73242792:73242877:73244920:73245089:73257628:73257666	73244920:73245089	ENST00000537584.2,ENST00000577435.1	TGCT	rs78740665	chr17:73244930	G/C	7.32e-04
exon_skip_293290	17	73242792:73242877:73244920:73245089:73257628:73257666	73244920:73245089	ENST00000537584.2,ENST00000577435.1	THCA	rs78740665	chr17:73244930	G/C	9.24e-06
exon_skip_293290	17	73242792:73242877:73244920:73245089:73257628:73257666	73244920:73245089	ENST00000537584.2,ENST00000577435.1	THCA	rs78740665	chr17:73244930	G/C	6.32e-05
exon_skip_293291	17	73242792:73242877:73244920:73245089:73258362:73258439	73244920:73245089	ENST00000579743.1	COAD	rs78740665	chr17:73244930	G/C	1.36e-03
exon_skip_293291	17	73242792:73242877:73244920:73245089:73258362:73258439	73244920:73245089	ENST00000579743.1	HNSC	rs78740665	chr17:73244930	G/C	6.31e-06
exon_skip_293291	17	73242792:73242877:73244920:73245089:73258362:73258439	73244920:73245089	ENST00000579743.1	HNSC	rs78740665	chr17:73244930	G/C	3.30e-04
exon_skip_293291	17	73242792:73242877:73244920:73245089:73258362:73258439	73244920:73245089	ENST00000579743.1	LGG	rs78740665	chr17:73244930	G/C	3.72e-13
exon_skip_293291	17	73242792:73242877:73244920:73245089:73258362:73258439	73244920:73245089	ENST00000579743.1	LGG	rs78740665	chr17:73244930	G/C	1.02e-04
exon_skip_293291	17	73242792:73242877:73244920:73245089:73258362:73258439	73244920:73245089	ENST00000579743.1	KIRC	rs78740665	chr17:73244930	G/C	3.82e-06
exon_skip_293291	17	73242792:73242877:73244920:73245089:73258362:73258439	73244920:73245089	ENST00000579743.1	KIRC	rs78740665	chr17:73244930	G/C	1.82e-03
exon_skip_293291	17	73242792:73242877:73244920:73245089:73258362:73258439	73244920:73245089	ENST00000579743.1	LUAD	rs78740665	chr17:73244930	G/C	5.07e-06
exon_skip_293291	17	73242792:73242877:73244920:73245089:73258362:73258439	73244920:73245089	ENST00000579743.1	LUSC	rs78740665	chr17:73244930	G/C	5.30e-06
exon_skip_293291	17	73242792:73242877:73244920:73245089:73258362:73258439	73244920:73245089	ENST00000579743.1	LUSC	rs78740665	chr17:73244930	G/C	8.87e-05
exon_skip_293291	17	73242792:73242877:73244920:73245089:73258362:73258439	73244920:73245089	ENST00000579743.1	PAAD	rs78740665	chr17:73244930	G/C	4.31e-05
exon_skip_293291	17	73242792:73242877:73244920:73245089:73258362:73258439	73244920:73245089	ENST00000579743.1	PRAD	rs78740665	chr17:73244930	G/C	3.18e-03
exon_skip_293291	17	73242792:73242877:73244920:73245089:73258362:73258439	73244920:73245089	ENST00000579743.1	TGCT	rs78740665	chr17:73244930	G/C	7.32e-04
exon_skip_293291	17	73242792:73242877:73244920:73245089:73258362:73258439	73244920:73245089	ENST00000579743.1	THCA	rs78740665	chr17:73244930	G/C	9.24e-06
exon_skip_293291	17	73242792:73242877:73244920:73245089:73258362:73258439	73244920:73245089	ENST00000579743.1	THCA	rs78740665	chr17:73244930	G/C	6.32e-05
exon_skip_293283	17	73239597:73239651:73240482:73240571:73240699:73240798	73240482:73240571	ENST00000582376.1	GBM	rs2306216	chr17:73240559	A/G	7.69e-04
exon_skip_293283	17	73239597:73239651:73240482:73240571:73240699:73240798	73240482:73240571	ENST00000582376.1	COAD	rs2306216	chr17:73240559	A/G	1.22e-04
exon_skip_293283	17	73239597:73239651:73240482:73240571:73240699:73240798	73240482:73240571	ENST00000582376.1	BLCA	rs2306216	chr17:73240559	A/G	6.98e-04
exon_skip_293283	17	73239597:73239651:73240482:73240571:73240699:73240798	73240482:73240571	ENST00000582376.1	ESCA	rs2306216	chr17:73240559	A/G	8.52e-04
exon_skip_293283	17	73239597:73239651:73240482:73240571:73240699:73240798	73240482:73240571	ENST00000582376.1	HNSC	rs2306216	chr17:73240559	A/G	1.33e-04
exon_skip_293283	17	73239597:73239651:73240482:73240571:73240699:73240798	73240482:73240571	ENST00000582376.1	LGG	rs2306216	chr17:73240559	A/G	1.24e-10
exon_skip_293283	17	73239597:73239651:73240482:73240571:73240699:73240798	73240482:73240571	ENST00000582376.1	KIRC	rs2306216	chr17:73240559	A/G	5.79e-04
exon_skip_293283	17	73239597:73239651:73240482:73240571:73240699:73240798	73240482:73240571	ENST00000582376.1	LUAD	rs2306216	chr17:73240559	A/G	1.83e-07
exon_skip_293283	17	73239597:73239651:73240482:73240571:73240699:73240798	73240482:73240571	ENST00000582376.1	LUSC	rs2306216	chr17:73240559	A/G	9.00e-07
exon_skip_293283	17	73239597:73239651:73240482:73240571:73240699:73240798	73240482:73240571	ENST00000582376.1	PRAD	rs2306216	chr17:73240559	A/G	3.15e-04
exon_skip_293283	17	73239597:73239651:73240482:73240571:73240699:73240798	73240482:73240571	ENST00000582376.1	THCA	rs2306216	chr17:73240559	A/G	3.73e-08

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Splicing Quantitative Trait Methylation (sQTM) in the skipped exon for GGA3

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Survival analysis of Splicing Quantitative Trait Methylation (sQTM) in the skipped exon for GGA3

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RelatedDrugs for GGA3

Approved drugs targeting this gene.
(DrugBank Version 5.1.0 2018-04-02)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for GGA3

Diseases associated with this gene.
(DisGeNet 4.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	Gene structures and expression levels
	Exon skipping events with PSIs in TCGA
	Exon skipping events with PSIs in GTEx
	Open reading frame (ORF) annotation in the exon skipping event
	Exon skipping events in the canonical protein sequence
	SNVs in the skipped exons with depth of coverage
	Splicing Quantitative Trait Loci (sQTLs) in the skipped exons
	Splicing Quantitative Trait Methylation (sQTM) in the skipped exon
	Related drugs with this gene
	Related diseases with this gene

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Gene summary for GGA3

Exon skipping events across known transcript of Ensembl for GGA3 from UCSC genome browser

Gene isoform structures and expression levels for GGA3

Exon skipping events with PSIs in TCGA for GGA3

Exon skipping events with PSIs in GTEx for GGA3

Open reading frame (ORF) annotation in the exon skipping event for GGA3

Infer the effects of exon skipping event on protein functional features for GGA3

SNVs in the skipped exons for GGA3

Splicing Quantitative Trait Loci (sQTL) in the exon skipping event for GGA3

Splicing Quantitative Trait Methylation (sQTM) in the skipped exon for GGA3

Survival analysis of Splicing Quantitative Trait Methylation (sQTM) in the skipped exon for GGA3

RelatedDrugs for GGA3

RelatedDiseases for GGA3