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| Open reading frame (ORF) annotation in the exon skipping event |
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| Splicing Quantitative Trait Loci (sQTLs) in the skipped exons |
| Splicing Quantitative Trait Methylation (sQTM) in the skipped exon |
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Gene summary for FCGR1B |
 Gene summary |
| Gene information | Gene symbol | FCGR1B | Gene ID | 2210 |
| Gene name | Fc fragment of IgG receptor Ib | |
| Synonyms | CD64b|IGFRB | |
| Cytomap | 1p11.2 | |
| Type of gene | protein-coding | |
| Description | high affinity immunoglobulin gamma Fc receptor IBFc fragment of IgG, high affinity Ib, receptor (CD64)Fc gamma receptor IbFc-gamma receptor I B2fc-gamma RIBfcRIBhFcgammaRIBigG Fc receptor IB | |
| Modification date | 20180329 | |
| UniProtAcc | Q92637 | |
| Context | PubMed: FCGR1B [Title/Abstract] AND exon [Title/Abstract] AND skip [Title/Abstract] - Title (PMID) |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
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Exon skipping events across known transcript of Ensembl for FCGR1B from UCSC genome browser |
| Skipped exons in TCGA and GTEx based on Ensembl gene isoform structure. * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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Gene isoform structures and expression levels for FCGR1B |
| Expression levels of gene isoforms across TCGA. |
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| Expression levels of gene isoforms across GTEx. |
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Exon skipping events with PSIs in TCGA for FCGR1B |
| Information of exkip skipping event in TCGA. |
| Exon skip ID | chr | Exons involved in exon skipping | Skipped exon | ENSG | ENSTs |
| exon_skip_29780 | 1 | 120927354:120927417:120928330:120928615:120930038:120930293 | 120928330:120928615 | ENSG00000198019.8 | ENST00000472543.1 |
| exon_skip_29781 | 1 | 120930038:120930293:120934380:120934606:120935447:120935468 | 120934380:120934606 | ENSG00000198019.8 | ENST00000369178.4 |
| exon_skip_29782 | 1 | 120930038:120930293:120934380:120934635:120935447:120935468 | 120934380:120934635 | ENSG00000198019.8 | ENST00000471609.1,ENST00000369384.4,ENST00000472543.1 |
| PSI values of skipped exons in TCGA. |
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Exon skipping events with PSIs in GTEx for FCGR1B |
| Information of exkip skipping event in GTEx |
| Exon skip ID | chr | Exons involved in exon skipping | Skipped exon | ENSG | ENSTs |
| exon_skip_29780 | 1 | 120927354:120927417:120928330:120928615:120930038:120930293 | 120928330:120928615 | ENSG00000198019.8 | ENST00000472543.1 |
| exon_skip_29781 | 1 | 120930038:120930293:120934380:120934606:120935447:120935468 | 120934380:120934606 | ENSG00000198019.8 | ENST00000369178.4 |
| exon_skip_29782 | 1 | 120930038:120930293:120934380:120934635:120935447:120935468 | 120934380:120934635 | ENSG00000198019.8 | ENST00000369384.4,ENST00000472543.1,ENST00000471609.1 |
| PSI values of skipped exons in GTEx. |
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| * Skipped exon sequences. |
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Open reading frame (ORF) annotation in the exon skipping event for FCGR1B |
| Open reading frame (ORF) of individual exon skipping events in TCGA based on the Ensembl gene structure combined from isoforms. |
| ENST | Start of skipped exon | End of skipped exon | ORF |
| Open reading frame (ORF) of individual exon skipping events in GTEx based on the Ensembl gene structure combined from isoforms. |
| ENST | Start of skipped exon | End of skipped exon | ORF |
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Infer the effects of exon skipping event on protein functional features for FCGR1B |
| Exon skipping at the protein sequence level and followed lost functional features. * Click on the image to enlarge it in a new window. |
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| Loci of skipped exons in TCGA across genomic, transcript, and protein sequence levels of In-frame cases. |
| ENST | Length of mRNA | Length of AA seq. | Genomic start | Genomic end | mRNA start | mRNA end | AA start | AA end |
| Loci of skipped exons in GTEx across genomic, transcript, and protein sequence levels of In-frame cases. |
| ENST | Length of mRNA | Length of AA seq. | Genomic start | Genomic end | mRNA start | mRNA end | AA start | AA end |
| Lost protein functional features of individual exon skipping events in TCGA. |
| UniProt acc. | Start of exon skipping (AA) | End of exon skipping (AA) | Protein feature start (AA) | Protein feature end (AA) | Category of protein feature | Description of feature |
| Lost protein functional features of individual exon skipping events in GTEx. |
| UniProt acc. | Start of exon skipping (AA) | End of exon skipping (AA) | Protein feature start (AA) | Protein feature end (AA) | Category of protein feature | Description of feature |
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SNVs in the skipped exons for FCGR1B |
| - Lollipop plot for presenting exon skipping associated SNVs. * Click on the image to enlarge it in a new window. |
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| - Differential PSIs between mutated versus non-mutated samples. |
| - Non-synonymous mutations located in the skipped exons in TCGA. |
| Cancer type | Sample | ESID | Skipped exon start | Skipped exon end | Mutation start | Mutation end | Mutation type | Reference seq | Mutation seq | AAchange |
| CHOL | TCGA-W5-AA39-01 | exon_skip_29781 | 120934381 | 120934606 | 120934442 | 120934442 | Frame_Shift_Del | T | - | p.E82fs |
| CHOL | TCGA-W5-AA39-01 | exon_skip_29781 | 120934381 | 120934606 | 120934442 | 120934442 | Frame_Shift_Del | T | - | p.Y83fs |
| CHOL | TCGA-W5-AA39-01 | exon_skip_29782 | 120934381 | 120934635 | 120934442 | 120934442 | Frame_Shift_Del | T | - | p.E82fs |
| CHOL | TCGA-W5-AA39-01 | exon_skip_29782 | 120934381 | 120934635 | 120934442 | 120934442 | Frame_Shift_Del | T | - | p.Y83fs |
| LIHC | TCGA-BC-A112-01 | exon_skip_29781 | 120934381 | 120934606 | 120934402 | 120934403 | Frame_Shift_Ins | - | G | p.T96fs |
| LIHC | TCGA-BC-A112-01 | exon_skip_29782 | 120934381 | 120934635 | 120934402 | 120934403 | Frame_Shift_Ins | - | G | p.T96fs |
| - Depth of coverage in the three exons composing exon skipping event |
| Depth of coverage in three exons | Mutation description |
| - Non-synonymous mutations located in the skipped exons in CCLE. |
| Sample | Skipped exon start | Skipped exon end | Mutation start | Mutation end | Mutation type | Reference seq | Mutation seq | AAchange |
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Splicing Quantitative Trait Loci (sQTL) in the exon skipping event for FCGR1B |
| sQTL information located at the skipped exons. |
| Exon skip ID | Chromosome | Three exons | Skippped exon | ENST | Cancer type | SNP id | Location | DNA change (ref/var) | P-value |
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Splicing Quantitative Trait Methylation (sQTM) in the skipped exon for FCGR1B |
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Survival analysis of Splicing Quantitative Trait Methylation (sQTM) in the skipped exon for FCGR1B |
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RelatedDrugs for FCGR1B |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for FCGR1B |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
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